Query 018820
Match_columns 350
No_of_seqs 236 out of 2260
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 06:33:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018820.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018820hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h51_A Aspartate aminotransfer 100.0 3.6E-59 1.2E-63 456.5 25.9 310 34-350 8-320 (420)
2 3k7y_A Aspartate aminotransfer 100.0 2.5E-53 8.6E-58 413.9 32.5 302 46-349 2-303 (405)
3 3meb_A Aspartate aminotransfer 100.0 3.6E-49 1.2E-53 389.0 29.4 304 46-349 22-339 (448)
4 4f4e_A Aromatic-amino-acid ami 100.0 5.3E-46 1.8E-50 362.7 30.6 300 46-349 22-323 (420)
5 7aat_A Aspartate aminotransfer 100.0 1.4E-45 4.9E-50 356.7 30.2 303 46-349 1-304 (401)
6 4eu1_A Mitochondrial aspartate 100.0 6E-45 2E-49 353.7 25.5 297 47-349 15-312 (409)
7 3fsl_A Aromatic-amino-acid ami 100.0 1.7E-42 5.9E-47 334.1 31.6 298 48-349 1-301 (397)
8 1yaa_A Aspartate aminotransfer 100.0 2.4E-41 8.2E-46 328.4 31.8 303 46-349 2-312 (412)
9 2q7w_A Aspartate aminotransfer 100.0 3E-40 1E-44 318.3 31.1 300 48-349 1-300 (396)
10 1ajs_A Aspartate aminotransfer 100.0 3E-40 1E-44 320.5 31.2 301 47-349 4-312 (412)
11 2ay1_A Aroat, aromatic amino a 100.0 8.4E-40 2.9E-44 315.2 29.1 297 48-349 1-297 (394)
12 3dyd_A Tyrosine aminotransfera 100.0 2.8E-39 9.6E-44 316.1 24.9 285 48-348 27-315 (427)
13 3rq1_A Aminotransferase class 100.0 1.4E-38 4.7E-43 309.5 20.9 289 51-349 12-316 (418)
14 3t18_A Aminotransferase class 100.0 8E-39 2.7E-43 310.7 18.9 292 48-349 8-315 (413)
15 1b5p_A Protein (aspartate amin 100.0 6.1E-38 2.1E-42 302.1 21.9 273 51-349 7-281 (385)
16 3tcm_A Alanine aminotransferas 100.0 2.9E-35 9.8E-40 293.9 26.0 249 91-349 107-367 (500)
17 3b46_A Aminotransferase BNA3; 100.0 1.2E-35 4.3E-40 292.0 22.4 255 71-348 55-321 (447)
18 3fvs_A Kynurenine--oxoglutarat 100.0 1.1E-35 3.6E-40 289.0 21.6 275 46-348 4-293 (422)
19 3jtx_A Aminotransferase; NP_28 100.0 1.6E-35 5.4E-40 285.3 22.0 274 50-349 7-292 (396)
20 3ihj_A Alanine aminotransferas 100.0 5.8E-35 2E-39 291.6 24.8 262 74-349 64-366 (498)
21 3e2y_A Kynurenine-oxoglutarate 100.0 6.3E-35 2.1E-39 282.3 22.3 269 52-348 5-286 (410)
22 1gd9_A Aspartate aminotransfer 100.0 1.7E-34 5.9E-39 277.6 24.4 269 53-349 8-280 (389)
23 3nra_A Aspartate aminotransfer 100.0 7E-35 2.4E-39 281.5 21.1 279 47-348 6-299 (407)
24 3h14_A Aminotransferase, class 100.0 9.8E-35 3.4E-39 279.7 21.1 264 51-348 7-276 (391)
25 2r2n_A Kynurenine/alpha-aminoa 100.0 2.1E-34 7.1E-39 281.3 22.3 271 52-348 11-308 (425)
26 2x5d_A Probable aminotransfera 100.0 1.9E-34 6.5E-39 280.0 21.3 253 71-349 35-292 (412)
27 1u08_A Hypothetical aminotrans 100.0 1.3E-33 4.6E-38 271.3 26.0 268 51-348 11-282 (386)
28 3aow_A Putative uncharacterize 100.0 4.6E-34 1.6E-38 281.3 23.1 268 54-349 60-335 (448)
29 3ele_A Amino transferase; RER0 100.0 2.9E-34 1E-38 276.8 21.2 255 72-349 34-302 (398)
30 1o4s_A Aspartate aminotransfer 100.0 9.9E-34 3.4E-38 273.0 24.3 267 55-349 21-293 (389)
31 1j32_A Aspartate aminotransfer 100.0 1.9E-33 6.6E-38 270.2 25.1 268 55-348 10-283 (388)
32 3ppl_A Aspartate aminotransfer 100.0 7.1E-35 2.4E-39 284.4 14.9 253 72-349 32-306 (427)
33 3ezs_A Aminotransferase ASPB; 100.0 2.1E-33 7.1E-38 268.6 24.3 263 56-349 5-278 (376)
34 3qgu_A LL-diaminopimelate amin 100.0 2E-34 6.9E-39 282.8 17.7 257 71-349 67-337 (449)
35 2o1b_A Aminotransferase, class 100.0 5.1E-34 1.7E-38 276.7 20.1 252 71-349 45-300 (404)
36 1yiz_A Kynurenine aminotransfe 100.0 1.6E-33 5.5E-38 274.7 23.4 272 50-349 17-302 (429)
37 2x5f_A Aspartate_tyrosine_phen 100.0 6.2E-34 2.1E-38 277.8 19.5 264 72-348 46-324 (430)
38 3g0t_A Putative aminotransfera 100.0 3.4E-34 1.2E-38 279.7 15.8 261 63-348 34-324 (437)
39 2o0r_A RV0858C (N-succinyldiam 100.0 3.6E-33 1.2E-37 270.9 22.8 268 51-348 6-279 (411)
40 1bw0_A TAT, protein (tyrosine 100.0 4.4E-33 1.5E-37 270.3 23.0 277 59-348 18-304 (416)
41 2dou_A Probable N-succinyldiam 100.0 2.3E-33 7.9E-38 268.7 19.4 251 71-349 23-277 (376)
42 2zc0_A Alanine glyoxylate tran 100.0 3.2E-32 1.1E-36 263.3 25.0 253 72-349 33-293 (407)
43 3ei9_A LL-diaminopimelate amin 100.0 5.5E-33 1.9E-37 271.3 19.4 255 72-348 55-324 (432)
44 1xi9_A Putative transaminase; 100.0 1.8E-32 6.1E-37 265.6 22.2 267 59-348 26-296 (406)
45 3piu_A 1-aminocyclopropane-1-c 100.0 3.3E-32 1.1E-36 266.1 23.8 263 67-349 31-319 (435)
46 1vp4_A Aminotransferase, putat 100.0 3.1E-32 1.1E-36 265.7 22.9 255 72-349 42-306 (425)
47 3g7q_A Valine-pyruvate aminotr 100.0 1.5E-33 5.3E-38 273.1 13.1 264 57-349 14-296 (417)
48 3fdb_A Beta C-S lyase, putativ 100.0 2E-32 6.7E-37 261.7 20.1 247 72-349 22-271 (377)
49 3d6k_A Putative aminotransfera 100.0 5.6E-33 1.9E-37 270.9 16.3 263 59-349 20-304 (422)
50 1v2d_A Glutamine aminotransfer 100.0 4.8E-32 1.6E-36 260.0 21.4 242 73-348 25-268 (381)
51 1iay_A ACC synthase 2, 1-amino 100.0 8.5E-32 2.9E-36 262.5 23.2 256 73-349 36-314 (428)
52 3ly1_A Putative histidinol-pho 100.0 9.8E-32 3.3E-36 254.9 23.0 245 70-349 13-258 (354)
53 2gb3_A Aspartate aminotransfer 100.0 5.1E-32 1.7E-36 262.8 21.2 268 52-348 20-290 (409)
54 3ez1_A Aminotransferase MOCR f 100.0 1.8E-32 6.2E-37 266.7 17.7 264 61-349 15-299 (423)
55 2zyj_A Alpha-aminodipate amino 100.0 5.9E-32 2E-36 261.0 20.8 250 72-349 31-284 (397)
56 2z61_A Probable aspartate amin 100.0 9.4E-32 3.2E-36 257.0 20.8 255 55-348 9-268 (370)
57 3get_A Histidinol-phosphate am 100.0 2E-31 6.8E-36 254.1 21.8 241 73-349 30-272 (365)
58 1c7n_A Cystalysin; transferase 100.0 1.6E-31 5.3E-36 257.8 21.0 250 73-348 31-286 (399)
59 3kax_A Aminotransferase, class 100.0 2.6E-31 8.9E-36 254.2 22.1 251 72-349 23-279 (383)
60 3asa_A LL-diaminopimelate amin 100.0 1.1E-31 3.8E-36 259.6 19.6 250 71-349 31-291 (400)
61 4dq6_A Putative pyridoxal phos 100.0 6.4E-31 2.2E-35 252.1 23.2 249 72-348 31-286 (391)
62 1fg7_A Histidinol phosphate am 100.0 3.3E-31 1.1E-35 252.7 20.9 230 73-349 29-259 (356)
63 3op7_A Aminotransferase class 100.0 6.2E-31 2.1E-35 251.5 22.0 213 110-348 56-268 (375)
64 3dzz_A Putative pyridoxal 5'-p 100.0 1E-30 3.6E-35 250.7 23.1 251 72-348 26-282 (391)
65 3if2_A Aminotransferase; YP_26 100.0 3.7E-32 1.3E-36 266.1 12.4 268 58-349 15-322 (444)
66 3euc_A Histidinol-phosphate am 100.0 3.9E-30 1.3E-34 245.3 25.8 245 67-349 24-271 (367)
67 3f6t_A Aspartate aminotransfer 100.0 5.5E-32 1.9E-36 272.2 13.4 245 74-342 104-390 (533)
68 3ffh_A Histidinol-phosphate am 100.0 1.6E-30 5.6E-35 247.5 22.3 240 72-349 31-270 (363)
69 2zy4_A L-aspartate beta-decarb 100.0 1.1E-31 3.7E-36 270.7 14.8 222 75-320 106-338 (546)
70 1d2f_A MALY protein; aminotran 100.0 2E-30 6.8E-35 249.5 21.4 248 73-348 28-282 (390)
71 1lc5_A COBD, L-threonine-O-3-p 100.0 2.3E-29 7.7E-34 240.1 24.5 250 60-349 12-262 (364)
72 3l8a_A METC, putative aminotra 100.0 5.1E-30 1.7E-34 249.7 18.7 251 72-348 60-316 (421)
73 3bwn_A AT1G70560, L-tryptophan 100.0 1E-30 3.5E-35 252.9 12.5 234 71-349 20-265 (391)
74 3ftb_A Histidinol-phosphate am 100.0 2.8E-29 9.7E-34 238.4 21.7 238 71-349 24-261 (361)
75 3b1d_A Betac-S lyase; HET: PLP 99.9 4.2E-32 1.4E-36 261.7 0.0 254 73-349 31-287 (392)
76 3cq5_A Histidinol-phosphate am 100.0 1.6E-28 5.4E-33 234.9 23.6 240 74-349 31-276 (369)
77 3fkd_A L-threonine-O-3-phospha 100.0 1.6E-28 5.6E-33 232.7 19.3 229 72-349 14-242 (350)
78 3p1t_A Putative histidinol-pho 100.0 3.2E-28 1.1E-32 229.0 21.1 229 72-349 15-243 (337)
79 3hdo_A Histidinol-phosphate am 100.0 1.4E-27 4.8E-32 227.3 24.7 234 72-349 25-259 (360)
80 1uu1_A Histidinol-phosphate am 100.0 1.9E-28 6.5E-33 231.2 17.5 229 73-349 19-247 (335)
81 2hox_A ALLIIN lyase 1; cystein 99.9 3.7E-28 1.3E-32 237.8 9.0 232 72-349 55-299 (427)
82 1e5e_A MGL, methionine gamma-l 99.9 6.6E-26 2.2E-30 220.2 22.8 228 75-348 20-258 (404)
83 3a2b_A Serine palmitoyltransfe 99.9 9E-25 3.1E-29 210.5 23.6 241 72-347 42-287 (398)
84 1bs0_A Protein (8-amino-7-oxon 99.9 3.2E-23 1.1E-27 198.5 23.5 236 72-347 38-280 (384)
85 2rfv_A Methionine gamma-lyase; 99.9 3.8E-23 1.3E-27 199.8 21.3 228 76-348 23-259 (398)
86 3tqx_A 2-amino-3-ketobutyrate 99.9 2.5E-23 8.5E-28 199.7 17.9 240 71-347 41-290 (399)
87 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.3E-23 4.5E-28 199.8 15.7 206 72-312 6-223 (371)
88 1t3i_A Probable cysteine desul 99.9 3.3E-23 1.1E-27 200.0 17.8 213 73-327 27-254 (420)
89 1sff_A 4-aminobutyrate aminotr 99.9 2.5E-23 8.7E-28 202.0 15.2 249 72-347 40-312 (426)
90 2eh6_A Acoat, acetylornithine 99.9 7.3E-23 2.5E-27 195.3 17.5 241 71-348 26-286 (375)
91 1kmj_A Selenocysteine lyase; p 99.9 3.8E-22 1.3E-26 191.5 19.1 213 73-326 22-248 (406)
92 1vjo_A Alanine--glyoxylate ami 99.9 1.9E-22 6.6E-27 193.5 15.7 200 112-348 60-286 (393)
93 1fc4_A 2-amino-3-ketobutyrate 99.9 4.1E-22 1.4E-26 191.9 18.0 239 71-348 43-293 (401)
94 4adb_A Succinylornithine trans 99.9 7.6E-22 2.6E-26 190.2 19.3 239 71-348 37-297 (406)
95 2ez2_A Beta-tyrosinase, tyrosi 99.9 7.3E-22 2.5E-26 193.7 18.4 221 71-320 31-278 (456)
96 2dr1_A PH1308 protein, 386AA l 99.9 7.8E-22 2.7E-26 188.3 17.9 203 112-348 46-271 (386)
97 1jg8_A L-ALLO-threonine aldola 99.9 3.8E-22 1.3E-26 188.3 15.3 202 73-308 3-213 (347)
98 2bwn_A 5-aminolevulinate synth 99.9 2.4E-21 8.1E-26 186.7 20.2 174 112-312 86-260 (401)
99 1eg5_A Aminotransferase; PLP-d 99.9 3E-22 1E-26 190.8 13.3 199 115-348 42-252 (384)
100 2ord_A Acoat, acetylornithine 99.9 9.2E-22 3.1E-26 189.5 16.8 238 72-348 39-296 (397)
101 1elu_A L-cysteine/L-cystine C- 99.9 1.9E-22 6.4E-27 192.9 11.2 171 112-312 53-234 (390)
102 2w8t_A SPT, serine palmitoyltr 99.9 4.8E-21 1.6E-25 186.8 21.2 209 71-312 62-276 (427)
103 1ibj_A CBL, cystathionine beta 99.9 1.3E-21 4.4E-26 193.4 15.3 232 73-348 89-326 (464)
104 1vef_A Acetylornithine/acetyl- 99.9 9E-21 3.1E-25 182.3 18.7 240 72-347 44-298 (395)
105 3cai_A Possible aminotransfera 99.9 8.1E-21 2.8E-25 182.9 18.1 209 74-325 26-248 (406)
106 1svv_A Threonine aldolase; str 99.9 1E-20 3.5E-25 178.6 18.0 207 72-308 12-227 (359)
107 2aeu_A Hypothetical protein MJ 99.9 4E-21 1.4E-25 184.5 15.4 220 74-348 29-252 (374)
108 3kki_A CAI-1 autoinducer synth 99.9 1.3E-20 4.5E-25 182.2 18.4 208 71-312 57-268 (409)
109 3ruy_A Ornithine aminotransfer 99.9 2E-20 6.8E-25 179.7 19.5 240 72-348 35-297 (392)
110 1b9h_A AHBA synthase, protein 99.9 3.7E-21 1.3E-25 184.6 14.4 186 93-314 16-203 (388)
111 1gc0_A Methionine gamma-lyase; 99.9 1.4E-20 4.8E-25 181.9 18.3 227 78-348 26-260 (398)
112 2oga_A Transaminase; PLP-depen 99.9 9.6E-21 3.3E-25 182.8 17.1 203 73-320 30-235 (399)
113 2po3_A 4-dehydrase; external a 99.8 8.3E-21 2.8E-25 184.7 15.9 201 77-321 20-222 (424)
114 3lvm_A Cysteine desulfurase; s 99.8 1.2E-21 4E-26 189.8 9.7 165 118-312 69-238 (423)
115 2ch1_A 3-hydroxykynurenine tra 99.8 1.2E-20 4.2E-25 180.9 16.1 169 113-312 45-219 (396)
116 1pff_A Methionine gamma-lyase; 99.8 8.9E-21 3.1E-25 178.0 14.7 184 121-346 2-192 (331)
117 2huf_A Alanine glyoxylate amin 99.8 1E-20 3.6E-25 181.2 15.2 211 67-326 12-229 (393)
118 3f9t_A TDC, L-tyrosine decarbo 99.8 8.6E-21 2.9E-25 181.1 14.1 158 140-315 86-263 (397)
119 3acz_A Methionine gamma-lyase; 99.8 4.4E-20 1.5E-24 178.1 19.1 190 116-347 58-252 (389)
120 1cs1_A CGS, protein (cystathio 99.8 6.6E-20 2.3E-24 176.2 19.7 190 115-346 50-244 (386)
121 3ndn_A O-succinylhomoserine su 99.8 1.4E-19 4.8E-24 176.3 21.5 213 90-346 53-273 (414)
122 2z9v_A Aspartate aminotransfer 99.8 1.9E-20 6.4E-25 179.4 15.0 175 116-325 41-218 (392)
123 3a9z_A Selenocysteine lyase; P 99.8 1.9E-20 6.6E-25 182.0 15.0 165 119-313 63-260 (432)
124 3i4j_A Aminotransferase, class 99.8 1.3E-19 4.3E-24 176.6 19.8 253 72-348 28-311 (430)
125 3dxv_A Alpha-amino-epsilon-cap 99.8 7.4E-20 2.5E-24 178.7 17.7 251 72-348 42-314 (439)
126 1v72_A Aldolase; PLP-dependent 99.8 2.3E-20 7.7E-25 176.2 13.6 214 71-320 5-232 (356)
127 3cog_A Cystathionine gamma-lya 99.8 3.7E-20 1.3E-24 179.7 15.4 191 115-348 65-261 (403)
128 4eb5_A Probable cysteine desul 99.8 1.9E-20 6.4E-25 178.5 13.1 164 117-313 43-213 (382)
129 2pb2_A Acetylornithine/succiny 99.8 2.3E-19 8E-24 174.6 20.2 240 71-348 55-315 (420)
130 1m32_A 2-aminoethylphosphonate 99.8 1.6E-20 5.4E-25 177.5 11.5 200 74-312 4-207 (366)
131 3qhx_A Cystathionine gamma-syn 99.8 3.1E-19 1.1E-23 172.4 20.6 192 115-348 64-260 (392)
132 1zod_A DGD, 2,2-dialkylglycine 99.8 1.9E-19 6.4E-24 175.4 19.1 250 72-347 42-318 (433)
133 3l44_A Glutamate-1-semialdehyd 99.8 2.2E-19 7.5E-24 175.1 18.0 248 71-348 53-318 (434)
134 1iug_A Putative aspartate amin 99.8 5.6E-20 1.9E-24 173.2 13.1 162 117-312 34-199 (352)
135 2eo5_A 419AA long hypothetical 99.8 2.5E-19 8.7E-24 174.1 18.1 248 72-348 41-325 (419)
136 1s0a_A Adenosylmethionine-8-am 99.8 6E-19 2.1E-23 171.7 20.7 250 72-348 42-325 (429)
137 3zrp_A Serine-pyruvate aminotr 99.8 2.4E-20 8.1E-25 177.7 10.5 167 117-312 35-203 (384)
138 1ax4_A Tryptophanase; tryptoph 99.8 1.2E-19 4.1E-24 178.4 15.8 190 111-321 70-289 (467)
139 1n8p_A Cystathionine gamma-lya 99.8 1E-19 3.6E-24 175.9 14.8 186 116-345 54-248 (393)
140 3dr4_A Putative perosamine syn 99.8 1.2E-19 4E-24 174.4 14.8 204 71-319 20-226 (391)
141 3kgw_A Alanine-glyoxylate amin 99.8 1.5E-19 5.1E-24 172.6 15.1 174 118-326 57-233 (393)
142 2c81_A Glutamine-2-deoxy-scyll 99.8 3E-19 1E-23 173.3 17.0 192 93-321 15-214 (418)
143 2yrr_A Aminotransferase, class 99.8 1.1E-19 3.9E-24 170.7 12.9 164 117-312 33-200 (353)
144 3nx3_A Acoat, acetylornithine 99.8 8.6E-19 3E-23 168.5 19.1 238 72-348 35-294 (395)
145 3isl_A Purine catabolism prote 99.8 2.4E-19 8.2E-24 172.9 15.2 172 118-325 45-220 (416)
146 3nnk_A Ureidoglycine-glyoxylat 99.8 5.5E-19 1.9E-23 170.1 17.6 173 119-326 48-223 (411)
147 4a6r_A Omega transaminase; tra 99.8 1.6E-18 5.5E-23 170.6 20.8 254 72-348 49-337 (459)
148 1mdo_A ARNB aminotransferase; 99.8 3.2E-19 1.1E-23 171.0 15.4 173 113-320 35-209 (393)
149 3fq8_A Glutamate-1-semialdehyd 99.8 1.2E-18 4E-23 169.5 19.4 241 71-347 50-314 (427)
150 4ffc_A 4-aminobutyrate aminotr 99.8 5.8E-19 2E-23 173.7 17.2 251 72-348 63-339 (453)
151 4hvk_A Probable cysteine desul 99.8 3.3E-19 1.1E-23 169.2 14.7 159 119-308 45-210 (382)
152 2cy8_A D-phgat, D-phenylglycin 99.8 7.2E-19 2.5E-23 172.5 17.1 241 72-348 56-319 (453)
153 3lws_A Aromatic amino acid bet 99.8 1.6E-19 5.3E-24 171.1 11.7 201 90-327 21-229 (357)
154 1o69_A Aminotransferase; struc 99.8 4.8E-19 1.6E-23 170.7 14.9 176 113-320 26-205 (394)
155 3uwc_A Nucleotide-sugar aminot 99.8 2.9E-19 9.9E-24 170.2 13.2 198 74-318 7-207 (374)
156 3nyt_A Aminotransferase WBPE; 99.8 2.6E-19 9E-24 170.7 12.2 189 93-320 15-207 (367)
157 3mad_A Sphingosine-1-phosphate 99.8 1.6E-18 5.5E-23 173.0 18.3 203 90-314 110-328 (514)
158 3k28_A Glutamate-1-semialdehyd 99.8 2.5E-18 8.5E-23 167.5 19.0 249 71-348 51-316 (429)
159 3f0h_A Aminotransferase; RER07 99.8 2.3E-18 7.9E-23 163.9 18.3 171 120-325 55-228 (376)
160 3n5m_A Adenosylmethionine-8-am 99.8 3.6E-18 1.2E-22 167.5 20.1 248 71-348 47-336 (452)
161 1qgn_A Protein (cystathionine 99.8 7.8E-18 2.7E-22 165.4 22.0 224 78-345 75-305 (445)
162 2epj_A Glutamate-1-semialdehyd 99.8 5.6E-18 1.9E-22 165.2 20.9 240 72-347 55-318 (434)
163 3gju_A Putative aminotransfera 99.8 7.3E-18 2.5E-22 166.0 21.8 255 71-348 49-343 (460)
164 2cb1_A O-acetyl homoserine sul 99.8 4E-18 1.4E-22 165.5 19.3 163 110-308 47-215 (412)
165 2dkj_A Serine hydroxymethyltra 99.8 4.5E-19 1.5E-23 170.6 12.5 209 73-320 23-247 (407)
166 2oat_A Ornithine aminotransfer 99.8 1.5E-17 5E-22 163.0 23.4 239 72-347 75-337 (439)
167 1z7d_A Ornithine aminotransfer 99.8 5.6E-18 1.9E-22 165.6 20.3 239 72-347 64-326 (433)
168 1wyu_B Glycine dehydrogenase s 99.8 1.1E-18 3.8E-23 172.6 14.5 202 74-312 67-285 (474)
169 3a8u_X Omega-amino acid--pyruv 99.8 1.4E-17 4.9E-22 163.0 21.9 250 72-347 49-342 (449)
170 2bkw_A Alanine-glyoxylate amin 99.8 1.3E-18 4.6E-23 165.7 13.9 168 118-312 39-215 (385)
171 3oks_A 4-aminobutyrate transam 99.8 5.3E-18 1.8E-22 166.6 18.5 255 71-348 59-341 (451)
172 3vax_A Putative uncharacterize 99.8 4.9E-19 1.7E-23 169.9 10.1 158 119-305 65-230 (400)
173 3i16_A Aluminum resistance pro 99.8 5E-18 1.7E-22 165.8 16.8 183 111-326 68-269 (427)
174 3ffr_A Phosphoserine aminotran 99.8 3.5E-18 1.2E-22 161.3 15.2 155 120-308 46-203 (362)
175 3jzl_A Putative cystathionine 99.8 7.6E-18 2.6E-22 163.7 18.0 181 111-326 54-252 (409)
176 3frk_A QDTB; aminotransferase, 99.8 1.5E-18 5.3E-23 165.5 12.5 189 93-319 16-207 (373)
177 2e7u_A Glutamate-1-semialdehyd 99.8 1.5E-17 5E-22 161.7 19.6 237 72-347 51-313 (424)
178 3ht4_A Aluminum resistance pro 99.8 1.1E-17 3.7E-22 163.8 18.1 178 118-326 66-258 (431)
179 3dod_A Adenosylmethionine-8-am 99.8 1E-17 3.4E-22 164.3 17.6 251 72-348 43-333 (448)
180 3pj0_A LMO0305 protein; struct 99.8 3E-18 1E-22 162.2 12.8 183 111-326 42-230 (359)
181 3tfu_A Adenosylmethionine-8-am 99.8 9E-18 3.1E-22 165.5 16.5 250 74-348 76-354 (457)
182 3mc6_A Sphingosine-1-phosphate 99.8 5.3E-18 1.8E-22 168.3 14.6 186 111-314 97-296 (497)
183 3nmy_A Xometc, cystathionine g 99.8 1.5E-17 5.1E-22 161.3 17.3 189 117-347 67-261 (400)
184 2fq6_A Cystathionine beta-lyas 99.8 1.6E-17 5.6E-22 161.7 17.0 157 118-312 83-246 (415)
185 1qz9_A Kynureninase; kynurenin 99.7 1.5E-17 5E-22 160.6 16.1 160 117-312 71-242 (416)
186 4e77_A Glutamate-1-semialdehyd 99.7 4.8E-17 1.7E-21 158.3 19.8 240 71-348 51-316 (429)
187 3hvy_A Cystathionine beta-lyas 99.7 1.2E-17 4E-22 163.2 15.0 182 111-326 69-269 (427)
188 2fnu_A Aminotransferase; prote 99.7 2E-17 6.7E-22 157.2 15.3 186 93-319 12-203 (375)
189 3n0l_A Serine hydroxymethyltra 99.7 1.7E-17 5.7E-22 160.1 14.9 153 140-319 88-247 (417)
190 3i5t_A Aminotransferase; pyrid 99.7 1.2E-16 4.1E-21 158.2 21.5 254 71-348 52-344 (476)
191 2oqx_A Tryptophanase; lyase, p 99.7 2.7E-17 9.1E-22 161.5 15.7 217 71-314 30-281 (467)
192 2dgk_A GAD-beta, GADB, glutama 99.7 1.7E-17 5.9E-22 162.8 13.9 199 93-314 55-278 (452)
193 3ju7_A Putative PLP-dependent 99.7 1.1E-16 3.6E-21 153.9 19.0 172 117-320 36-212 (377)
194 1w23_A Phosphoserine aminotran 99.7 5.2E-19 1.8E-23 167.4 2.0 155 119-312 50-209 (360)
195 3ri6_A O-acetylhomoserine sulf 99.7 1.2E-16 3.9E-21 156.4 17.6 159 115-309 80-242 (430)
196 3hmu_A Aminotransferase, class 99.7 3.3E-16 1.1E-20 154.9 21.1 255 71-348 53-340 (472)
197 2ctz_A O-acetyl-L-homoserine s 99.7 6.3E-17 2.2E-21 157.6 15.3 182 91-308 31-219 (421)
198 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 5E-17 1.7E-21 158.7 14.2 168 113-314 58-235 (437)
199 3ecd_A Serine hydroxymethyltra 99.7 1.2E-16 4.3E-21 154.2 14.6 146 148-316 100-252 (425)
200 2cjg_A L-lysine-epsilon aminot 99.7 1.2E-16 4E-21 156.9 14.3 204 119-348 103-346 (449)
201 3h7f_A Serine hydroxymethyltra 99.7 1.7E-16 5.7E-21 155.7 15.3 142 148-312 113-261 (447)
202 3e9k_A Kynureninase; kynurenin 99.7 3.7E-16 1.3E-20 153.7 15.3 211 73-308 66-289 (465)
203 1rv3_A Serine hydroxymethyltra 99.7 3.3E-16 1.1E-20 155.3 14.2 204 73-313 44-270 (483)
204 2z67_A O-phosphoseryl-tRNA(SEC 99.7 8.5E-16 2.9E-20 151.1 15.7 175 122-317 138-317 (456)
205 2c0r_A PSAT, phosphoserine ami 99.7 7.5E-17 2.6E-21 153.0 7.1 168 142-348 69-253 (362)
206 2x3l_A ORN/Lys/Arg decarboxyla 99.7 1.8E-16 6.1E-21 155.7 9.7 170 112-313 52-226 (446)
207 1js3_A DDC;, DOPA decarboxylas 99.6 1.1E-15 3.8E-20 151.3 13.5 209 90-315 84-320 (486)
208 3gbx_A Serine hydroxymethyltra 99.6 1.1E-15 3.8E-20 147.3 12.2 147 140-313 93-246 (420)
209 3vp6_A Glutamate decarboxylase 99.6 1E-14 3.5E-19 145.6 18.1 204 93-317 109-335 (511)
210 3b8x_A WBDK, pyridoxamine 5-ph 99.6 7.3E-15 2.5E-19 140.9 16.3 132 112-265 29-167 (390)
211 2okj_A Glutamate decarboxylase 99.6 1.3E-14 4.4E-19 144.4 18.3 203 95-316 108-331 (504)
212 3hbx_A GAD 1, glutamate decarb 99.6 1E-14 3.4E-19 145.4 15.8 202 91-315 67-294 (502)
213 2vi8_A Serine hydroxymethyltra 99.6 1.8E-15 6.3E-20 145.2 9.6 168 123-328 75-250 (405)
214 2yky_A Beta-transaminase; tran 99.3 1.9E-16 6.4E-21 156.2 0.0 238 72-347 99-349 (465)
215 2jis_A Cysteine sulfinic acid 99.6 1E-13 3.4E-18 138.4 19.1 200 94-314 123-343 (515)
216 2fyf_A PSAT, phosphoserine ami 99.6 4.7E-15 1.6E-19 142.7 8.9 154 119-312 80-236 (398)
217 2qma_A Diaminobutyrate-pyruvat 99.6 2.3E-14 7.8E-19 142.3 13.8 200 93-315 114-342 (497)
218 3ke3_A Putative serine-pyruvat 99.5 1.9E-13 6.4E-18 130.9 18.1 162 121-312 39-213 (379)
219 2vyc_A Biodegradative arginine 99.5 3.9E-14 1.3E-18 147.5 14.3 171 119-308 207-397 (755)
220 1c4k_A Protein (ornithine deca 99.5 3.3E-14 1.1E-18 147.2 13.2 173 115-308 171-366 (730)
221 2a7v_A Serine hydroxymethyltra 99.5 3.4E-13 1.2E-17 133.7 14.0 224 51-313 34-280 (490)
222 1wyu_A Glycine dehydrogenase ( 99.5 1.7E-13 5.9E-18 133.7 11.6 156 120-312 111-275 (438)
223 3n75_A LDC, lysine decarboxyla 99.4 3.1E-13 1E-17 139.1 11.2 170 115-308 193-379 (715)
224 4e1o_A HDC, histidine decarbox 99.4 1.1E-12 3.7E-17 129.9 14.3 205 93-315 92-326 (481)
225 1ohv_A 4-aminobutyrate aminotr 99.4 1.8E-12 6.3E-17 128.0 12.2 192 71-268 61-307 (472)
226 3k40_A Aromatic-L-amino-acid d 99.4 3.6E-12 1.2E-16 126.0 12.6 206 93-316 87-320 (475)
227 3hl2_A O-phosphoseryl-tRNA(SEC 98.9 2.5E-08 8.7E-13 96.7 15.0 165 141-319 135-305 (501)
228 3bc8_A O-phosphoseryl-tRNA(SEC 98.8 1.6E-07 5.3E-12 91.6 15.9 164 142-320 118-288 (450)
229 4ao9_A Beta-phenylalanine amin 98.7 2.4E-07 8.4E-12 90.7 17.1 218 71-325 85-309 (454)
230 4atq_A 4-aminobutyrate transam 98.4 5E-06 1.7E-10 81.4 16.8 252 71-347 62-339 (456)
231 4a0g_A Adenosylmethionine-8-am 98.3 2.9E-05 1E-09 81.4 18.5 103 208-325 577-687 (831)
232 4e3q_A Pyruvate transaminase; 97.9 0.0017 5.9E-08 63.6 21.5 160 140-312 128-320 (473)
233 3ou5_A Serine hydroxymethyltra 97.9 5.7E-05 2E-09 73.1 10.4 217 60-313 42-280 (490)
234 3e77_A Phosphoserine aminotran 97.6 2E-05 6.8E-10 75.3 2.9 154 120-308 61-218 (377)
235 3qm2_A Phosphoserine aminotran 97.6 2.5E-05 8.5E-10 74.8 3.0 157 117-308 72-233 (386)
236 3m5u_A Phosphoserine aminotran 97.4 0.00085 2.9E-08 63.5 11.6 151 119-308 52-205 (361)
237 1ofu_X SULA, hypothetical prot 74.4 15 0.00051 28.4 8.0 100 148-255 10-112 (119)
238 1oft_A SULA, hypothetical prot 71.6 33 0.0011 28.0 9.7 98 151-256 55-155 (161)
239 4fgs_A Probable dehydrogenase 70.2 9.8 0.00033 33.9 6.9 101 140-248 28-133 (273)
240 3tpc_A Short chain alcohol deh 62.5 60 0.0021 27.7 10.5 98 142-247 8-114 (257)
241 3rwb_A TPLDH, pyridoxal 4-dehy 61.4 46 0.0016 28.4 9.5 99 141-247 6-109 (247)
242 2gjx_A Beta-hexosaminidase alp 60.9 9.6 0.00033 37.3 5.3 61 187-258 173-233 (507)
243 1jak_A Beta-N-acetylhexosamini 60.2 17 0.00058 35.5 6.9 65 187-258 185-249 (512)
244 3m1a_A Putative dehydrogenase; 56.7 82 0.0028 27.2 10.5 94 148-247 10-108 (281)
245 4dqx_A Probable oxidoreductase 56.7 70 0.0024 27.9 10.0 99 141-247 27-130 (277)
246 1now_A Beta-hexosaminidase bet 55.8 15 0.0005 35.9 5.6 60 187-258 179-238 (507)
247 2yv1_A Succinyl-COA ligase [AD 55.2 67 0.0023 28.7 9.6 26 238-263 106-131 (294)
248 3guy_A Short-chain dehydrogena 55.2 37 0.0013 28.5 7.7 94 148-247 6-101 (230)
249 3grp_A 3-oxoacyl-(acyl carrier 54.9 69 0.0023 27.7 9.6 99 141-247 27-130 (266)
250 3gvc_A Oxidoreductase, probabl 54.8 65 0.0022 28.1 9.5 99 141-247 29-132 (277)
251 2yv2_A Succinyl-COA synthetase 54.4 1.1E+02 0.0037 27.3 10.9 48 207-263 85-132 (297)
252 3rd5_A Mypaa.01249.C; ssgcid, 54.0 32 0.0011 30.2 7.3 96 142-246 17-112 (291)
253 4fn4_A Short chain dehydrogena 53.9 88 0.003 27.2 10.0 101 140-248 6-115 (254)
254 2fp4_A Succinyl-COA ligase [GD 51.8 75 0.0026 28.5 9.4 111 140-266 13-136 (305)
255 3gh5_A HEX1, beta-hexosaminida 51.6 27 0.00093 34.2 6.7 66 186-258 209-274 (525)
256 4g81_D Putative hexonate dehyd 51.5 54 0.0018 28.6 8.2 100 140-247 8-115 (255)
257 3tzq_B Short-chain type dehydr 51.3 1.2E+02 0.004 26.1 11.7 99 141-247 11-116 (271)
258 4e6p_A Probable sorbitol dehyd 50.4 92 0.0031 26.6 9.6 98 142-247 9-111 (259)
259 2ehh_A DHDPS, dihydrodipicolin 50.1 86 0.003 27.8 9.5 25 220-246 127-151 (294)
260 2yl5_A Beta-N-acetylhexosamini 48.5 14 0.00047 35.4 4.0 29 230-258 85-113 (442)
261 1hjs_A Beta-1,4-galactanase; 4 47.8 39 0.0013 30.8 6.9 37 229-265 49-85 (332)
262 3h7a_A Short chain dehydrogena 47.7 92 0.0031 26.5 9.1 97 142-247 8-112 (252)
263 3pxx_A Carveol dehydrogenase; 47.7 74 0.0025 27.5 8.6 99 141-247 10-126 (287)
264 1c7s_A Beta-N-acetylhexosamini 47.7 38 0.0013 35.3 7.4 118 139-258 267-418 (858)
265 1fob_A Beta-1,4-galactanase; B 47.2 36 0.0012 31.0 6.6 73 183-265 13-85 (334)
266 2vc6_A MOSA, dihydrodipicolina 47.0 1.3E+02 0.0043 26.7 10.1 36 220-259 127-162 (292)
267 1o5k_A DHDPS, dihydrodipicolin 46.8 1.4E+02 0.0048 26.7 10.4 37 219-259 138-174 (306)
268 4dyv_A Short-chain dehydrogena 45.9 1.3E+02 0.0043 26.1 9.8 99 141-247 28-132 (272)
269 3op4_A 3-oxoacyl-[acyl-carrier 45.9 1.3E+02 0.0043 25.5 9.7 99 141-247 9-112 (248)
270 3ozo_A N-acetylglucosaminidase 45.8 26 0.0009 34.7 5.6 59 187-257 215-273 (572)
271 4b79_A PA4098, probable short- 44.9 1.5E+02 0.005 25.6 9.9 95 141-247 11-105 (242)
272 3gaf_A 7-alpha-hydroxysteroid 44.6 1.5E+02 0.005 25.3 9.9 99 141-247 12-117 (256)
273 2yl6_A Beta-N-acetylhexosamini 44.3 14 0.00049 35.2 3.4 29 230-258 82-110 (434)
274 4ibo_A Gluconate dehydrogenase 44.3 1.4E+02 0.0049 25.6 9.9 99 141-247 26-132 (271)
275 1xky_A Dihydrodipicolinate syn 43.8 1.5E+02 0.0052 26.3 10.2 37 219-260 138-174 (301)
276 2r8w_A AGR_C_1641P; APC7498, d 43.8 1.2E+02 0.0042 27.4 9.6 37 219-260 160-196 (332)
277 3l6e_A Oxidoreductase, short-c 43.8 1.1E+02 0.0037 25.7 8.9 94 148-247 8-106 (235)
278 3kzv_A Uncharacterized oxidore 43.3 1.5E+02 0.0052 25.1 10.2 95 148-247 7-108 (254)
279 2ojp_A DHDPS, dihydrodipicolin 43.3 1.5E+02 0.0051 26.2 10.0 29 217-247 125-153 (292)
280 1bqc_A Protein (beta-mannanase 42.9 67 0.0023 28.3 7.6 18 180-197 36-53 (302)
281 3ppi_A 3-hydroxyacyl-COA dehyd 42.1 1.7E+02 0.0056 25.2 10.3 99 141-247 30-138 (281)
282 4eso_A Putative oxidoreductase 41.6 49 0.0017 28.4 6.3 98 142-247 9-111 (255)
283 3is3_A 17BETA-hydroxysteroid d 41.1 1.2E+02 0.0042 26.0 8.9 99 141-247 18-125 (270)
284 1uls_A Putative 3-oxoacyl-acyl 40.5 1.2E+02 0.004 25.6 8.6 92 148-247 10-106 (245)
285 3gem_A Short chain dehydrogena 40.5 1.1E+02 0.0038 26.2 8.5 92 148-247 32-127 (260)
286 3tsc_A Putative oxidoreductase 40.2 1.3E+02 0.0043 25.9 8.9 99 141-247 11-130 (277)
287 2rfg_A Dihydrodipicolinate syn 40.1 1.5E+02 0.0053 26.2 9.5 35 220-259 127-161 (297)
288 1vl8_A Gluconate 5-dehydrogena 39.7 1.8E+02 0.0061 24.9 9.9 98 142-247 22-128 (267)
289 2ew8_A (S)-1-phenylethanol deh 39.3 1.7E+02 0.0059 24.6 10.8 94 148-247 12-111 (249)
290 3n74_A 3-ketoacyl-(acyl-carrie 38.9 1.8E+02 0.006 24.6 9.9 98 142-247 10-113 (261)
291 3a5f_A Dihydrodipicolinate syn 38.8 1.6E+02 0.0055 26.0 9.4 27 150-179 81-108 (291)
292 4gkb_A 3-oxoacyl-[acyl-carrier 38.1 1.5E+02 0.0052 25.6 9.0 100 140-248 6-112 (258)
293 2cc0_A Acetyl-xylan esterase; 37.8 39 0.0013 27.9 4.8 67 183-256 112-179 (195)
294 4gqr_A Pancreatic alpha-amylas 37.8 23 0.00078 33.5 3.8 28 238-265 75-102 (496)
295 3t7c_A Carveol dehydrogenase; 37.7 2E+02 0.007 25.0 10.8 99 141-247 28-147 (299)
296 1hxh_A 3BETA/17BETA-hydroxyste 37.4 1.9E+02 0.0064 24.4 10.4 94 148-247 11-109 (253)
297 3qlj_A Short chain dehydrogena 37.1 1.8E+02 0.0061 25.7 9.6 99 141-247 27-143 (322)
298 3tfo_A Putative 3-oxoacyl-(acy 36.7 2E+02 0.0069 24.6 10.7 98 142-247 5-110 (264)
299 3zq4_A Ribonuclease J 1, RNAse 36.6 91 0.0031 30.5 8.0 78 166-254 322-408 (555)
300 4dmm_A 3-oxoacyl-[acyl-carrier 36.6 1.6E+02 0.0055 25.2 9.0 99 141-247 28-135 (269)
301 4imr_A 3-oxoacyl-(acyl-carrier 36.4 2.1E+02 0.0071 24.6 10.4 101 141-247 33-138 (275)
302 2qlc_A DNA repair protein RADC 36.0 45 0.0015 25.9 4.5 55 209-267 59-122 (126)
303 3l77_A Short-chain alcohol deh 35.7 1.9E+02 0.0064 23.9 10.1 94 148-247 7-109 (235)
304 1hdc_A 3-alpha, 20 beta-hydrox 35.7 2E+02 0.0068 24.3 9.6 94 148-247 10-108 (254)
305 2o23_A HADH2 protein; HSD17B10 35.4 2E+02 0.0068 24.2 12.4 94 148-247 17-121 (265)
306 4fc7_A Peroxisomal 2,4-dienoyl 35.2 2.1E+02 0.0073 24.5 10.5 99 141-247 27-134 (277)
307 2ya0_A Putative alkaline amylo 34.6 22 0.00076 36.2 3.2 29 238-266 253-281 (714)
308 3pgx_A Carveol dehydrogenase; 34.4 1.5E+02 0.0051 25.5 8.5 99 141-247 15-134 (280)
309 3sju_A Keto reductase; short-c 34.0 2.2E+02 0.0076 24.4 9.5 98 142-247 25-130 (279)
310 3tjr_A Short chain dehydrogena 33.0 2.5E+02 0.0084 24.5 9.8 98 142-247 32-137 (301)
311 1x1t_A D(-)-3-hydroxybutyrate 32.9 2.2E+02 0.0076 24.0 10.7 94 148-247 9-112 (260)
312 3ak4_A NADH-dependent quinucli 32.6 2.3E+02 0.0077 23.9 9.5 94 148-247 17-115 (263)
313 2nu8_A Succinyl-COA ligase [AD 32.6 48 0.0017 29.5 4.8 48 206-262 77-124 (288)
314 2a4k_A 3-oxoacyl-[acyl carrier 32.0 2.1E+02 0.0071 24.4 8.9 94 148-247 11-109 (263)
315 4hp8_A 2-deoxy-D-gluconate 3-d 31.8 2.4E+02 0.0081 24.4 9.1 99 140-248 8-109 (247)
316 2rhc_B Actinorhodin polyketide 31.8 2.4E+02 0.0084 24.1 9.6 98 142-247 23-128 (277)
317 3uve_A Carveol dehydrogenase ( 31.4 2.5E+02 0.0085 24.1 10.2 56 187-247 73-134 (286)
318 3r1i_A Short-chain type dehydr 30.7 2.6E+02 0.0088 24.0 11.1 98 142-247 33-138 (276)
319 3lyl_A 3-oxoacyl-(acyl-carrier 30.6 2.3E+02 0.008 23.5 10.3 94 148-247 10-111 (247)
320 3rkr_A Short chain oxidoreduct 30.5 2.5E+02 0.0084 23.8 10.5 99 141-247 29-136 (262)
321 3ged_A Short-chain dehydrogena 30.3 2.6E+02 0.0089 24.0 9.6 94 148-248 7-105 (247)
322 3zu3_A Putative reductase YPO4 30.1 3.4E+02 0.012 25.4 10.4 68 140-215 46-129 (405)
323 3h5d_A DHDPS, dihydrodipicolin 30.0 3E+02 0.01 24.5 12.9 37 219-260 134-170 (311)
324 1nff_A Putative oxidoreductase 30.0 2.5E+02 0.0087 23.7 9.8 93 148-246 12-109 (260)
325 3sx2_A Putative 3-ketoacyl-(ac 29.9 2.6E+02 0.0088 23.8 10.2 96 142-247 14-127 (278)
326 2hmc_A AGR_L_411P, dihydrodipi 29.8 2.1E+02 0.0073 26.0 8.8 39 217-260 149-187 (344)
327 2wkj_A N-acetylneuraminate lya 29.3 1.8E+02 0.006 25.9 8.1 92 120-247 67-164 (303)
328 3oec_A Carveol dehydrogenase ( 29.2 2.9E+02 0.01 24.2 10.7 99 141-247 46-164 (317)
329 3zv4_A CIS-2,3-dihydrobiphenyl 29.2 2.6E+02 0.0089 24.0 9.1 66 142-215 6-71 (281)
330 3ftp_A 3-oxoacyl-[acyl-carrier 28.9 2.7E+02 0.0093 23.8 9.9 99 141-247 28-134 (270)
331 1geg_A Acetoin reductase; SDR 28.5 2.6E+02 0.009 23.4 9.5 94 148-247 7-108 (256)
332 2jah_A Clavulanic acid dehydro 28.4 2.6E+02 0.009 23.4 10.3 94 148-247 12-113 (247)
333 3s55_A Putative short-chain de 28.3 2.8E+02 0.0095 23.7 10.8 98 142-247 11-128 (281)
334 4egf_A L-xylulose reductase; s 28.1 1.7E+02 0.0057 25.0 7.5 102 141-247 20-127 (266)
335 3rcn_A Beta-N-acetylhexosamini 28.0 35 0.0012 33.5 3.3 73 186-258 165-242 (543)
336 1i4n_A Indole-3-glycerol phosp 27.8 89 0.0031 27.3 5.6 49 203-260 109-157 (251)
337 3cxt_A Dehydrogenase with diff 27.6 2.9E+02 0.01 23.9 9.2 97 142-246 35-139 (291)
338 1g94_A Alpha-amylase; beta-alp 27.4 40 0.0014 31.9 3.5 30 238-267 63-92 (448)
339 3ucx_A Short chain dehydrogena 27.2 2.9E+02 0.0098 23.4 9.0 99 141-247 11-118 (264)
340 3rih_A Short chain dehydrogena 27.2 3.1E+02 0.011 23.8 12.0 99 141-247 41-148 (293)
341 3bk2_A RNAse J, metal dependen 27.2 2E+02 0.0067 28.1 8.6 78 166-254 337-423 (562)
342 1yht_A DSPB; beta barrel, hydr 27.0 37 0.0013 31.5 3.1 69 185-258 42-113 (367)
343 2ya1_A Putative alkaline amylo 26.8 40 0.0014 35.9 3.6 28 239-266 561-588 (1014)
344 4aie_A Glucan 1,6-alpha-glucos 26.7 44 0.0015 32.2 3.8 29 238-266 78-106 (549)
345 2cfc_A 2-(R)-hydroxypropyl-COM 26.6 2.7E+02 0.0093 23.0 9.4 93 148-247 7-112 (250)
346 3bzy_B ESCU; auto cleavage pro 26.6 38 0.0013 24.3 2.4 22 239-260 26-47 (83)
347 3s5o_A 4-hydroxy-2-oxoglutarat 26.5 3.4E+02 0.012 24.1 12.8 11 169-179 111-121 (307)
348 3qiv_A Short-chain dehydrogena 26.4 2.8E+02 0.0096 23.1 9.3 99 141-247 9-118 (253)
349 1lwj_A 4-alpha-glucanotransfer 26.3 47 0.0016 31.3 3.8 30 238-267 68-97 (441)
350 3v2h_A D-beta-hydroxybutyrate 26.1 3.1E+02 0.011 23.5 10.1 98 142-247 26-133 (281)
351 3sc4_A Short chain dehydrogena 25.8 3.2E+02 0.011 23.5 12.2 99 141-247 9-122 (285)
352 3f9i_A 3-oxoacyl-[acyl-carrier 25.7 2.8E+02 0.0096 23.0 8.5 91 148-245 19-111 (249)
353 3zxy_A Subtilisin-like protein 25.6 59 0.002 28.5 4.1 69 189-258 73-142 (282)
354 3mwd_B ATP-citrate synthase; A 25.6 70 0.0024 29.3 4.6 79 176-266 65-144 (334)
355 3ai3_A NADPH-sorbose reductase 25.5 3E+02 0.01 23.1 10.3 94 148-247 12-114 (263)
356 1vli_A Spore coat polysacchari 25.3 2.2E+02 0.0076 26.5 8.0 16 313-328 265-280 (385)
357 2wsb_A Galactitol dehydrogenas 25.1 2.9E+02 0.01 22.8 9.6 93 148-246 16-113 (254)
358 1ht6_A AMY1, alpha-amylase iso 25.1 52 0.0018 30.7 3.8 29 238-266 67-95 (405)
359 1ud2_A Amylase, alpha-amylase; 24.9 51 0.0017 31.4 3.8 29 238-266 79-107 (480)
360 3imf_A Short chain dehydrogena 24.9 3.1E+02 0.011 23.0 10.5 98 142-247 7-112 (257)
361 1ur4_A Galactanase; hydrolase, 24.7 1.3E+02 0.0044 28.2 6.4 29 237-265 86-114 (399)
362 1spx_A Short-chain reductase f 24.7 3.2E+02 0.011 23.1 9.0 66 142-215 7-78 (278)
363 2uvd_A 3-oxoacyl-(acyl-carrier 24.6 3E+02 0.01 22.8 10.1 94 148-247 9-111 (246)
364 3v8b_A Putative dehydrogenase, 24.5 3.4E+02 0.012 23.3 10.3 99 141-247 28-135 (283)
365 1wza_A Alpha-amylase A; hydrol 24.2 56 0.0019 31.2 3.9 29 238-266 80-108 (488)
366 2z1k_A (NEO)pullulanase; hydro 24.2 54 0.0018 31.1 3.8 29 238-266 95-123 (475)
367 3bh4_A Alpha-amylase; calcium, 24.2 54 0.0018 31.3 3.8 29 238-266 77-105 (483)
368 1wpc_A Glucan 1,4-alpha-maltoh 24.0 54 0.0019 31.3 3.8 29 238-266 81-109 (485)
369 1oaa_A Sepiapterin reductase; 23.8 2.9E+02 0.01 23.1 8.3 66 142-215 7-80 (259)
370 3qp9_A Type I polyketide synth 23.4 5E+02 0.017 24.9 11.5 101 138-247 248-371 (525)
371 3t4x_A Oxidoreductase, short c 23.4 3.4E+02 0.012 23.0 10.5 97 142-247 11-114 (267)
372 1hvx_A Alpha-amylase; hydrolas 23.4 56 0.0019 31.5 3.8 29 238-266 80-108 (515)
373 1meo_A Phosophoribosylglycinam 23.1 3.1E+02 0.011 22.9 8.0 81 203-297 10-92 (209)
374 1xp8_A RECA protein, recombina 23.1 4.3E+02 0.015 24.1 10.1 130 116-258 56-206 (366)
375 1jae_A Alpha-amylase; glycosid 23.0 50 0.0017 31.5 3.2 30 238-267 73-102 (471)
376 2o1e_A YCDH; alpha-beta protei 22.9 3E+02 0.01 24.5 8.3 46 167-216 189-234 (312)
377 3kux_A Putative oxidoreductase 22.9 1.8E+02 0.0061 26.1 7.0 68 178-258 56-123 (352)
378 3e9m_A Oxidoreductase, GFO/IDH 22.8 2.2E+02 0.0077 25.2 7.6 71 177-260 55-125 (330)
379 2guy_A Alpha-amylase A; (beta- 22.7 60 0.002 30.9 3.8 29 238-266 96-124 (478)
380 1mxg_A Alpha amylase; hyperthe 22.7 61 0.0021 30.6 3.8 29 238-266 85-113 (435)
381 2aaa_A Alpha-amylase; glycosid 22.6 57 0.002 31.1 3.6 30 238-267 96-125 (484)
382 3edm_A Short chain dehydrogena 22.3 3.5E+02 0.012 22.7 10.2 98 142-247 9-116 (259)
383 3db2_A Putative NADPH-dependen 22.1 1.9E+02 0.0065 25.9 7.0 72 176-260 53-124 (354)
384 1yb1_A 17-beta-hydroxysteroid 22.1 3.6E+02 0.012 22.8 8.8 92 148-245 36-135 (272)
385 2ae2_A Protein (tropinone redu 22.0 3.5E+02 0.012 22.6 10.3 94 148-247 14-116 (260)
386 1ae1_A Tropinone reductase-I; 21.9 3.7E+02 0.013 22.8 10.7 98 142-247 22-128 (273)
387 2vt1_B Surface presentation of 21.9 51 0.0018 24.2 2.4 22 239-260 26-47 (93)
388 1zk4_A R-specific alcohol dehy 21.5 3.4E+02 0.012 22.3 10.5 93 148-246 11-110 (251)
389 2dh2_A 4F2 cell-surface antige 21.5 69 0.0024 30.1 3.9 29 238-266 80-108 (424)
390 3ghf_A Septum site-determining 21.5 1.2E+02 0.0042 23.1 4.6 46 205-257 25-78 (120)
391 3lf2_A Short chain oxidoreduct 21.5 3.7E+02 0.013 22.7 10.0 99 141-247 8-116 (265)
392 1iy8_A Levodione reductase; ox 21.5 3.7E+02 0.013 22.6 9.8 97 142-246 14-121 (267)
393 1gcy_A Glucan 1,4-alpha-maltot 21.5 76 0.0026 30.7 4.3 30 238-267 91-120 (527)
394 1tqj_A Ribulose-phosphate 3-ep 21.4 3.7E+02 0.013 22.6 9.7 58 223-292 138-202 (230)
395 3a28_C L-2.3-butanediol dehydr 21.4 3.6E+02 0.012 22.5 9.9 93 148-246 7-109 (258)
396 1ua7_A Alpha-amylase; beta-alp 21.2 65 0.0022 30.1 3.6 31 238-268 73-103 (422)
397 2b4q_A Rhamnolipids biosynthes 21.1 3.9E+02 0.013 22.8 9.0 97 142-247 30-134 (276)
398 2z1n_A Dehydrogenase; reductas 21.0 3.7E+02 0.013 22.5 10.1 91 148-245 12-112 (260)
399 1xhl_A Short-chain dehydrogena 20.9 4.1E+02 0.014 23.0 10.1 97 142-246 27-136 (297)
400 3asu_A Short-chain dehydrogena 20.9 3.2E+02 0.011 22.9 7.9 94 148-247 5-104 (248)
401 3m5v_A DHDPS, dihydrodipicolin 20.9 1.7E+02 0.0059 26.0 6.2 62 181-248 95-161 (301)
402 2fcj_A Small toprim domain pro 20.8 39 0.0013 26.0 1.6 24 237-260 36-59 (119)
403 3q12_A Pantoate--beta-alanine 20.5 2.5E+02 0.0084 25.0 7.0 51 118-177 9-63 (287)
404 3kvo_A Hydroxysteroid dehydrog 20.4 4.6E+02 0.016 23.4 13.4 99 141-247 45-158 (346)
405 3oqb_A Oxidoreductase; structu 20.4 2.7E+02 0.0092 25.2 7.7 10 169-178 85-94 (383)
406 4iin_A 3-ketoacyl-acyl carrier 20.4 3.9E+02 0.013 22.6 9.0 94 148-247 34-136 (271)
407 3mxt_A Pantothenate synthetase 20.4 2.6E+02 0.0089 24.9 7.1 48 118-174 9-56 (285)
408 1w6u_A 2,4-dienoyl-COA reducta 20.4 4E+02 0.014 22.7 10.1 94 148-247 31-133 (302)
409 1f2d_A 1-aminocyclopropane-1-c 20.3 2.8E+02 0.0094 24.8 7.7 17 181-197 118-134 (341)
410 2wc7_A Alpha amylase, catalyti 20.3 57 0.0019 31.2 3.0 28 239-266 102-129 (488)
411 3oid_A Enoyl-[acyl-carrier-pro 20.3 3.9E+02 0.013 22.5 10.9 99 141-247 4-111 (258)
412 1y80_A Predicted cobalamin bin 20.2 3.4E+02 0.012 22.3 7.7 72 169-253 89-167 (210)
413 3t7y_A YOP proteins translocat 20.2 50 0.0017 24.5 2.0 23 239-261 41-63 (97)
414 3v2g_A 3-oxoacyl-[acyl-carrier 20.0 4.1E+02 0.014 22.6 10.7 99 141-247 31-138 (271)
No 1
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=3.6e-59 Score=456.50 Aligned_cols=310 Identities=43% Similarity=0.721 Sum_probs=272.4
Q ss_pred hhhcCCCCCCcccccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCC
Q 018820 34 SIAASPTSANQNDSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEY 113 (350)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y 113 (350)
+|+... +|+..+.|+.|+.+|+|+||++++++++|..+ ||||++|.|+|++|+|+++++|++|++.+. +....++|
T Consensus 8 ~m~~~~--~m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~-kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~-~~~~~~~Y 83 (420)
T 4h51_A 8 HMSTQA--AMTTAERWQKIQAQAPDVIFDLAKRAAAAKGP-KANLVIGAYRDEQGRPYPLRVVRKAEQLLL-DMNLDYEY 83 (420)
T ss_dssp ---------CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSS-CEECCSCCCBCTTSCBCCCHHHHHHHHHHH-HTTCCCCC
T ss_pred cccccc--hhhhhHHHhCCCCCCCChHHHHHHHHhcCCCC-CEEeecCcccCCCCCCCCCHHHHHHHHHHh-cCCCCCCC
Confidence 444443 45557899999999999999999999998766 999999999999999999999999998887 44556889
Q ss_pred CCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH--hcCCCEEEEcCCCCCChHHHHHHcCCe
Q 018820 114 LPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR--HYHQRTIYIPQPTWGNHPKVFTLAGLS 191 (350)
Q Consensus 114 ~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~--~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 191 (350)
.|..|+++||++++++++|.+.. .+++..+||.|+++|+.+++.++.. ..|||+|++++|+|++|..+++.+|.+
T Consensus 84 ~p~~G~p~lr~aia~~~~g~~~~---~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~ 160 (420)
T 4h51_A 84 LPISGYQPFIDEAVKIIYGNTVE---LENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWK 160 (420)
T ss_dssp CCTTCCHHHHHHHHHHHHC---C---GGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCC
T ss_pred CCcCChHHHHHHHHHHhcCCCcc---ccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCe
Confidence 99999999999999999987655 6788889999999999887766654 358999999999999999999999997
Q ss_pred -EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 192 -VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 192 -~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+..+++++++++++|++.+.+.++..+++.++++++|||||||.+++.++|++|+++|+++++++|+||+|++|.+++.
T Consensus 161 ~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~ 240 (420)
T 4h51_A 161 NICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSL 240 (420)
T ss_dssp CEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCH
T ss_pred EEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCc
Confidence 6678888888899999999999988888889999999999999999999999999999999999999999999999875
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcCC
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRDR 350 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~~ 350 (350)
+.++...+.+.+.+.++++++||||+|+|+|||+||+++++.+.+...++.+++..+.+.+++++|.++|+++..+|+|+
T Consensus 241 ~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~ 320 (420)
T 4h51_A 241 DTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNN 320 (420)
T ss_dssp HHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSH
T ss_pred ccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCH
Confidence 45556677777777899999999999999999999999888888888899999999999999999999999999999873
No 2
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=2.5e-53 Score=413.91 Aligned_cols=302 Identities=31% Similarity=0.545 Sum_probs=257.9
Q ss_pred cccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 018820 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKL 125 (350)
Q Consensus 46 ~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~a 125 (350)
.|+|++++..++++|+.+.++++++..+++|||++|.|+|+++++++++.|+++.. +.++....++|+|..|.++||++
T Consensus 2 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~a 80 (405)
T 3k7y_A 2 DKLLSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTL 80 (405)
T ss_dssp CCGGGGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHH
T ss_pred cchhhcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHH
Confidence 57899999999999999999999888889999999998788888888999999987 63123345789999999999999
Q ss_pred HHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCC
Q 018820 126 SAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 126 ia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
+++|+++.+...+.++++.+++|.|+++|+.++..++..+.+ |+|++++|+|++|..+++.+|++++.||+.+++++++
T Consensus 81 ia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 159 (405)
T 3k7y_A 81 TQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDI 159 (405)
T ss_dssp HHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEE
T ss_pred HHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCc
Confidence 999998877665567776445599999999996655533338 9999999999999999999999999999966667899
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
|++.+++.+++.++.++++++++||||||.+++.++|++|+++|++||++||+||+|.+|.+++.+++..+++.+...++
T Consensus 160 d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 239 (405)
T 3k7y_A 160 NYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNI 239 (405)
T ss_dssp CHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTC
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCC
Confidence 99999999976444455566566799999999999999999999999999999999999998753344456666665667
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|+++||||+|+|+|||+||+++++++++.++++.++++.+++..+++++.++|.++..+|++
T Consensus 240 ~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 303 (405)
T 3k7y_A 240 AFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNN 303 (405)
T ss_dssp CEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHC
T ss_pred cEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCC
Confidence 9999999999999999999999866778888888888888888888999999999999988875
No 3
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=3.6e-49 Score=389.04 Aligned_cols=304 Identities=44% Similarity=0.740 Sum_probs=267.4
Q ss_pred cccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhh-cCCCCCCCCCCCCcHHHHH
Q 018820 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVN-DRSRVKEYLPIVGLAEFNK 124 (350)
Q Consensus 46 ~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~-~~~~~~~Y~p~~G~~~lr~ 124 (350)
+++|++++..|+++|+.+.++++++..+++|||++|.|.|+.+++++.+.+++++..+.. +....++|.+..|.++||+
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~ 101 (448)
T 3meb_A 22 MSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLE 101 (448)
T ss_dssp CCTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHH
T ss_pred hhHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHH
Confidence 689999999999999999999999888889999999998888999999999999887751 2334578999999999999
Q ss_pred HHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH----HcCCeEEEEEeecC
Q 018820 125 LSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT----LAGLSVKSYRYYDP 200 (350)
Q Consensus 125 aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~ 200 (350)
+++++++|.+..++.+++|+++||+|+++|+.+++.+++.+.+||+|++++|+|++|..+++ ..|++++.||++++
T Consensus 102 ~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~ 181 (448)
T 3meb_A 102 AAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRK 181 (448)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCT
T ss_pred HHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEecccc
Confidence 99999988765545578999999999999998876677778899999999999999999999 99999999999776
Q ss_pred C-CCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHH
Q 018820 201 A-TRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRM 279 (350)
Q Consensus 201 ~-~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~ 279 (350)
+ ++++|++.+++.+++.+++.+++++++||||||.+++.++|++|+++|+++|+++|+||+|++|.+++.+.+.+++..
T Consensus 182 ~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~ 261 (448)
T 3meb_A 182 DGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRM 261 (448)
T ss_dssp TSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHH
T ss_pred ccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHH
Confidence 6 689999999999987555567899999999999999999999999999999999999999999998753234456666
Q ss_pred HhhcCCcEEEEeccccccCccCcceeEEEEee--------CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 280 FVADGGECFIAQSYAKNLGLYGERVGALSIVC--------KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~--------~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+...+.++|+++||||+||++|+|+||+++++ ++++..+.+++++....+..++++|.++|.++..+|++
T Consensus 262 ~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 339 (448)
T 3meb_A 262 FVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHD 339 (448)
T ss_dssp HHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred HhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcC
Confidence 66667899999999999999999999985457 66666678888898888899999999999999998875
No 4
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=5.3e-46 Score=362.73 Aligned_cols=300 Identities=47% Similarity=0.822 Sum_probs=256.6
Q ss_pred cccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 018820 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKL 125 (350)
Q Consensus 46 ~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~a 125 (350)
+++|+++...++++|+.+.+.++++..+++|||++|.|.++++++++.+.|+++......+ ...+.|.+..|.++||++
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ 100 (420)
T 4f4e_A 22 MSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEA-GLPRGYLPIDGIAAYDAS 100 (420)
T ss_dssp CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHT-CCCCCCCCTTCCHHHHHH
T ss_pred cCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhcc-CCCCCCCCCCCcHHHHHH
Confidence 5789999999999999999998887788999999998766777777778888887776533 345679999999999999
Q ss_pred HHHHHhCCCCCCccCC--cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCC
Q 018820 126 SAKLILGADSPAIREN--RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATR 203 (350)
Q Consensus 126 ia~~~~g~~~~~~~~~--~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 203 (350)
+++++.+.....+.++ +|++ |+|+++|+.+++.+++.+.+||+|++++|+|.+|...++..|++++.+|+.+++++
T Consensus 101 ia~~l~~~~~~~~~~~~~~i~~--t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~ 178 (420)
T 4f4e_A 101 VQKLLLGDDSPLIAAGRVVTAQ--ALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTN 178 (420)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEE--EEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTT
T ss_pred HHHHhcCCCccccccCceEEEE--CCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccC
Confidence 9999877655223477 7777 99999999997656777889999999999999999999999999999999666678
Q ss_pred CCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc
Q 018820 204 GLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD 283 (350)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~ 283 (350)
++|++.+++.+++.+++.+++++++||||||.+++.++|++|+++|+++|+++|+||+|.+|.+++ +.+..++..+...
T Consensus 179 ~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~ 257 (420)
T 4f4e_A 179 GVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESI-EADAAAVRLFAAA 257 (420)
T ss_dssp EECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCT-TGGGHHHHHHHHT
T ss_pred ccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCc-chhhHHHHHHHhc
Confidence 999999999998655556799999999999999999999999999999999999999999999863 2344566666555
Q ss_pred CCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 284 GGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 284 ~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
.+++|+++||||.||++|+|+||+++++++++..+++..+++...+..++++|.++|.++..+|++
T Consensus 258 ~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 323 (420)
T 4f4e_A 258 NLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLAS 323 (420)
T ss_dssp TCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcC
Confidence 679999999999999999999999855677777777778888888888899999999999887765
No 5
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=1.4e-45 Score=356.66 Aligned_cols=303 Identities=54% Similarity=0.964 Sum_probs=255.6
Q ss_pred cccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 018820 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKL 125 (350)
Q Consensus 46 ~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~a 125 (350)
+|+|+.++..++++++.+.+.++++..+++|||++|.|.|..+++++.+.+++++..+..+ .....|.+..|.++||++
T Consensus 1 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ 79 (401)
T 7aat_A 1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAK-KMDKEYLPIAGLADFTRA 79 (401)
T ss_dssp CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHT-TCCCCCCCTTCCHHHHHH
T ss_pred CChhhcCCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhccc-ccccCCCCCCCCHHHHHH
Confidence 3689999999999999999999988888899999999977888888888999988877632 345679999999999999
Q ss_pred HHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHH-HHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCC
Q 018820 126 SAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFL-ARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 126 ia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~-~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
+++++.+.....+.+++|++++|+|+++++.++...+ ..+.+||.|++++|+|.+|..+++..|++++.+|+.++++++
T Consensus 80 ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 159 (401)
T 7aat_A 80 SAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS 159 (401)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTE
T ss_pred HHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCc
Confidence 9999876544445588998778999999998864433 234789999999999999999999999999999986555689
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
+|++.+++.+++.+++..++++++||||||.+++.+++++|+++|++||+++|+||+|++|.+++.+.+..++..+....
T Consensus 160 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
T 7aat_A 160 LDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG 239 (401)
T ss_dssp ECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred cCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcC
Confidence 99999999887655556789999999999999999999999999999999999999999999864211234455555566
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++|+++||||.||++|+|+||++++.++++..+.+..++....+..+.+++.++|.++..++++
T Consensus 240 ~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (401)
T 7aat_A 240 IDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNT 304 (401)
T ss_dssp CCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred CcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCC
Confidence 79999999999999999999999855567776677888888888888899999999998877754
No 6
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=6e-45 Score=353.66 Aligned_cols=297 Identities=43% Similarity=0.782 Sum_probs=238.7
Q ss_pred ccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 018820 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLS 126 (350)
Q Consensus 47 ~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~ai 126 (350)
++|++++..++++|+.+.++++++..+++|||++|.|.+..+++.+.+.++++ . ....+.|.+..|.++||+++
T Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a----~--~~~~~~y~~~~g~~~lr~~i 88 (409)
T 4eu1_A 15 QTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA----T--LGTNMDYAPVTGIASFVEEA 88 (409)
T ss_dssp ------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTC----C--CCSCCCCCCTTCCHHHHHHH
T ss_pred hHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhc----C--ccccccCCCCCCcHHHHHHH
Confidence 68999999999999999999998888899999999987777777777777665 2 33457799999999999999
Q ss_pred HHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH-HhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCC
Q 018820 127 AKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA-RHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 127 a~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~-~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
+++++|.+..++.+++|..++|.|+++++.++..++. ...+||.|++++|+|..|..+++..|++++.+|+.+++++++
T Consensus 89 a~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (409)
T 4eu1_A 89 QKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGL 168 (409)
T ss_dssp HHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEE
T ss_pred HHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcC
Confidence 9998887655455788866679999999987544333 346889999999999999999999999999999866667899
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
|++.+++.+++.+++.+++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++...+..++..+.....
T Consensus 169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 248 (409)
T 4eu1_A 169 NLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP 248 (409)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred cHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence 99999999976544566888899999999999999999999999999999999999999998741112244555545567
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|+++||||.||++|+|+||+++++++++..+.+++++....+..+.+++.++|.++..+|++
T Consensus 249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 312 (409)
T 4eu1_A 249 NLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKD 312 (409)
T ss_dssp CCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHC
T ss_pred cEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCC
Confidence 8999999999999999999998434888877777888888888888889999999999988864
No 7
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=1.7e-42 Score=334.08 Aligned_cols=298 Identities=41% Similarity=0.765 Sum_probs=249.4
Q ss_pred cccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHH-HhhcCCCCCCCCCCCCcHHHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQ-LVNDRSRVKEYLPIVGLAEFNKLS 126 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~-l~~~~~~~~~Y~p~~G~~~lr~ai 126 (350)
+|++++..++++++.+.+.++++..+++|||++|.|.+.++++++.+.+.++... ... ....+.|.+..|.++||+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~-~~~~~~y~~~~g~~~lr~~l 79 (397)
T 3fsl_A 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQ-PHGASLYLPMEGLNCYRHAI 79 (397)
T ss_dssp CCTTCCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHS-CCCCCCCCCTTCCHHHHHHH
T ss_pred CcccCCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccC-ccccccCCCCCchHHHHHHH
Confidence 5788999999999999999998888899999999876666666666788888776 552 22456799999999999999
Q ss_pred HHHHhCCCCCCccCC--cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCC
Q 018820 127 AKLILGADSPAIREN--RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 127 a~~~~g~~~~~~~~~--~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
++++.+.....+.++ +|++ |+|+++++.++..+++.+.+||+|++++|+|..|...++..|++++.+|+.++++++
T Consensus 80 a~~~~~~~~~~~~~~~~~i~~--t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (397)
T 3fsl_A 80 APLLFGADHPVLKQQRVATIQ--TLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNG 157 (397)
T ss_dssp HHHHHCTTCHHHHTTCEEEEE--ESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTE
T ss_pred HHHHhcCCcccccccceEEEE--cCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCc
Confidence 999876554223477 7888 999999999875566677899999999999999999999999999999985556788
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
+|++.+++.+++.+++..++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.++. +.+..+...+....
T Consensus 158 ~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~ 236 (397)
T 3fsl_A 158 VRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGM-EEDAYAIRAIASAG 236 (397)
T ss_dssp ECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCT-TGGGHHHHHHHHTT
T ss_pred CcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCc-ccccHHHHHHHhcC
Confidence 99999999998654556789999999999999999999999999999999999999999999862 12334555555556
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++|+++||||.+|++|+|+||+++.+++++...++..+++...+..+++++.++|.++..+|.+
T Consensus 237 ~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 301 (397)
T 3fsl_A 237 LPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLND 301 (397)
T ss_dssp CCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTS
T ss_pred CCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcC
Confidence 79999999999999999999998844567777777777777777778888899999998887764
No 8
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=2.4e-41 Score=328.36 Aligned_cols=303 Identities=42% Similarity=0.772 Sum_probs=244.6
Q ss_pred cccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHH-HhhcCCCCCCCCCCCCcHHHHH
Q 018820 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQ-LVNDRSRVKEYLPIVGLAEFNK 124 (350)
Q Consensus 46 ~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~-l~~~~~~~~~Y~p~~G~~~lr~ 124 (350)
+|+|+++...++++++.+.+.++++.++++|||+.|.|.|.++.+++.+.++++... ... ....+.|.+..|.++||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~-~~~~~~y~~~~g~~~lr~ 80 (412)
T 1yaa_A 2 ATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHND-SSYNHEYLGITGLPSLTS 80 (412)
T ss_dssp TTTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTC-TTCCCCCCCTTCCHHHHH
T ss_pred cchhccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcC-cccccCCCCCCCcHHHHH
Confidence 457899999999999999998887667889999999987777666677888888877 652 233467989999999999
Q ss_pred HHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCC
Q 018820 125 LSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 125 aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
++++++.+.....+.+++|+++||+|+++|+.++..++..+.+||+|++++|+|..|...++..|++++.+|+.++++++
T Consensus 81 ~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 160 (412)
T 1yaa_A 81 NAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKS 160 (412)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTE
T ss_pred HHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCc
Confidence 99999865433223478898888999999999865555666799999999999999999999999999999985555688
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
+|++.+++.+++.+...+++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++...+..++..+...+
T Consensus 161 ~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T 1yaa_A 161 LDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL 240 (412)
T ss_dssp ECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcC
Confidence 99999999987653335677779999999999999999999999999999999999999998763100123444444444
Q ss_pred C---cEEEEeccccccCccCcceeEEEEee----CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 285 G---ECFIAQSYAKNLGLYGERVGALSIVC----KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 285 ~---~vi~~~S~SK~~gl~G~RvG~l~~v~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
. ++|+++||||.||++|+|+||+++++ .+++..+.+++++....+..+.+++.++|.++..+|++
T Consensus 241 ~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 312 (412)
T 1yaa_A 241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLET 312 (412)
T ss_dssp TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHS
T ss_pred CCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCC
Confidence 5 89999999999998899999977445 24544445777777767777888899999999888864
No 9
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=3e-40 Score=318.29 Aligned_cols=300 Identities=47% Similarity=0.835 Sum_probs=225.3
Q ss_pred cccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSA 127 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia 127 (350)
+|+++...++++++.+...+.++.+++.|||+.|.|.+.++..++.+.++++........ ..+.|.+..|.++||++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~~la 79 (396)
T 2q7w_A 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE-TTKNYLGIDGIPEFGRCTQ 79 (396)
T ss_dssp -CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHC-CCCCCCCTTCCHHHHHHHH
T ss_pred CccccccCCCchHHHHHHHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcc-cccCCCCCCCCHHHHHHHH
Confidence 478888999999988888877655678999999997555544455677777776654222 3467999999999999999
Q ss_pred HHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCH
Q 018820 128 KLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 207 (350)
Q Consensus 128 ~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 207 (350)
+++.+.....+.+++|++++|+|+++|+.++..++..+.+||+|++++|+|..|...++..|++++.+|+..++++++|+
T Consensus 80 ~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 159 (396)
T 2q7w_A 80 ELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDF 159 (396)
T ss_dssp HHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECH
T ss_pred HHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCH
Confidence 99866543223478887667999999998865555445799999999999999999999999999999984335688999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE
Q 018820 208 QGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 208 ~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
+.+++.+++.+.+.+++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ .....++..+...++++
T Consensus 160 ~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~ 238 (396)
T 2q7w_A 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGL-EEDAEGLRAFAAMHKEL 238 (396)
T ss_dssp HHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCH-HHHTHHHHHHHHHCSCE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCc-cchhHHHHHHHhcCCcE
Confidence 99999997644345688889999999999999999999999999999999999999998752 00123444454445789
Q ss_pred EEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++.||||.||++|+|+||++.++++++.+++++..+....+..+.+++.++|.++..+|++
T Consensus 239 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 300 (396)
T 2q7w_A 239 IVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300 (396)
T ss_dssp EEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred EEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcC
Confidence 99999999999999999998822256766667777777766677778899999999888764
No 10
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=3e-40 Score=320.46 Aligned_cols=301 Identities=54% Similarity=0.918 Sum_probs=243.5
Q ss_pred ccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 018820 47 SVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLS 126 (350)
Q Consensus 47 ~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~ai 126 (350)
++|+++...++++|+.+.+.++++.+++.|||+.|.|.+.++.+++.+.++++......+....+.|.+..|.++||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 4 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp CTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred chhhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence 47888999999999999888877667789999999975555555667888888777652222456799999999999999
Q ss_pred HHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCC-----CEEEEcCCCCCChHHHHHHcCCe-EEEEEeecC
Q 018820 127 AKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQ-----RTIYIPQPTWGNHPKVFTLAGLS-VKSYRYYDP 200 (350)
Q Consensus 127 a~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~g-----d~Vlv~~P~y~~~~~~~~~~G~~-~~~v~~~~~ 200 (350)
++++.+.....+.+++|++++|+|+++|+.++..++..+.+| |+|++++|+|..|...++..|++ ++.+++..+
T Consensus 84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 163 (412)
T 1ajs_A 84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT 163 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence 999866533223478888888999999999875555566799 99999999999999999999999 999998444
Q ss_pred CCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH
Q 018820 201 ATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280 (350)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~ 280 (350)
+++++|++.+++.+.+...+.+++++++||||||.+++.+++++|+++|++||+++|+||+|++|.+++.+....++..+
T Consensus 164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 243 (412)
T 1ajs_A 164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243 (412)
T ss_dssp TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence 56889999999998764334567778999999999999999999999999999999999999999875200022344444
Q ss_pred hhcCCcEEEEeccccccCccCcceeEEEEee--CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 281 VADGGECFIAQSYAKNLGLYGERVGALSIVC--KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 281 ~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
....+++|++.||||.+|++|+|+||++ + ++++..+.++.++....+..+.+++.++|.++..+|++
T Consensus 244 ~~~~~~~i~~~s~sK~~~~~G~riG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 312 (412)
T 1ajs_A 244 VSEGFELFCAQSFSKNFGLYNERVGNLT--VVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSD 312 (412)
T ss_dssp HHTTCCEEEEEECTTTSCCGGGCEEEEE--EECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHS
T ss_pred hccCCcEEEEEecccccCCCCcceEEEE--EecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcC
Confidence 4445789999999999998999999988 6 46666666777777767777888899999998888764
No 11
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=8.4e-40 Score=315.20 Aligned_cols=297 Identities=36% Similarity=0.689 Sum_probs=238.6
Q ss_pred cccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSA 127 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia 127 (350)
+|+++...++++++.+.+.++++.+++.|||+.|.|.+.++++++.+.++++....... ...+.|.+..|.++||++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~~la 79 (394)
T 2ay1_A 1 MLGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLET-ETTKTYAGLSGEPEFQKAMG 79 (394)
T ss_dssp CGGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHH-CCCCCCCCSSCCHHHHHHHH
T ss_pred CCccCccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCC-cccCCCCCCCCcHHHHHHHH
Confidence 47889999999999998888776677899999999855555455677888887776422 23567988899999999999
Q ss_pred HHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCH
Q 018820 128 KLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNF 207 (350)
Q Consensus 128 ~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 207 (350)
+++.+... .+++|++++|+|+++|+.++...+..+.+||+|++++|+|..|...++..|++++.+|+..++++++|+
T Consensus 80 ~~~~~~~~---~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 156 (394)
T 2ay1_A 80 ELILGDGL---KSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDF 156 (394)
T ss_dssp HHHHGGGC---CGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECH
T ss_pred HHHhCCCC---CcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCH
Confidence 99765432 267888778999999999865544434589999999999999999999999999999984435678999
Q ss_pred HHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE
Q 018820 208 QGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 208 ~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
+.+++.+++.+++.+++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ..+..++..+...++++
T Consensus 157 ~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~ 235 (394)
T 2ay1_A 157 EGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGL-EEDAAGTRLIASRIPEV 235 (394)
T ss_dssp HHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCH-HHHHHHHHHHHHHCSSE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCc-ccchHHHHHHhhcCCCE
Confidence 99999997654345678889999999999999999999999999999999999999998752 00123444444445689
Q ss_pred EEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++.||||.+|++|+|+||++.++++++..+.+.+.+....+..+.+++.++|.++..+|++
T Consensus 236 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 297 (394)
T 2ay1_A 236 LIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTT 297 (394)
T ss_dssp EEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHS
T ss_pred EEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcC
Confidence 99999999999999999998822267766667777776666677778899999988888764
No 12
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=2.8e-39 Score=316.12 Aligned_cols=285 Identities=14% Similarity=0.168 Sum_probs=213.8
Q ss_pred cccCCCCCCCCccccchHhhccCCCCC--eEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDPSPV--KLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKL 125 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~~~~--~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~a 125 (350)
+|+.+...++++|+.+.+.++.+..++ .|+|++|.+ +..|+.++.+.++++....... .....|.+..|.++||++
T Consensus 27 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~l~~g~~-~~~g~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~~ 104 (427)
T 3dyd_A 27 RPSDMAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGDP-TVFGNLPTDPEVTQAMKDALDS-GKYNGYAPSIGFLSSREE 104 (427)
T ss_dssp CCCC----------------CCCCCTTSCCEECCCSCT-TTTSSSCCCHHHHHHHHHHHHH-CCSSSCCCTTCCHHHHHH
T ss_pred chhhHhhcccchHHHHHHHHhhcccCCCCEEeCCCcCC-CccCCCCCCHHHHHHHHHHHhc-CcCCCCCCCCCcHHHHHH
Confidence 567888889999999999888766554 599999998 6555566678888887776532 234679999999999999
Q ss_pred HHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCC
Q 018820 126 SAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 126 ia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
+++++.+. ...+.+++|++ |+|+++|+.+++. .+..+||+|++++|+|.+|..+++..|++++.|++.+++++++
T Consensus 105 la~~~~~~-~~~~~~~~v~~--t~g~t~al~~~~~--~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 179 (427)
T 3dyd_A 105 IASYYHCP-EAPLEAKDVIL--TSGCSQAIDLCLA--VLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEI 179 (427)
T ss_dssp HHHHHCBT-TBCCCGGGEEE--ESSHHHHHHHHHH--HHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEE
T ss_pred HHHHHhhc-CCCCChHHEEE--ecCcHHHHHHHHH--HhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCC
Confidence 99997654 33345789998 9999999998543 4467999999999999999999999999999999965567889
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
|++.+++.++++ ..++++++||||||.+++.++|++|+++|+++|+++|+||+|.+|.+++ +...+...+ ....
T Consensus 180 d~~~l~~~l~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g--~~~~~~~~~-~~~~ 253 (427)
T 3dyd_A 180 DLKQLEYLIDEK---TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSD--CKYEPLATL-STDV 253 (427)
T ss_dssp CHHHHHSSCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSS--CCCCCGGGG-CSSC
T ss_pred CHHHHHHHhccC---CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCC--CcCccHHHh-CCCC
Confidence 999999988653 3477889999999999999999999999999999999999999998864 222233333 2334
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChh--HHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTAD--VAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++|+++||||.|+++|+|+||++ ++++. ..+.+.+++....+. ..+++.++|.++..+|+
T Consensus 254 ~vi~~~S~sK~~~~~G~riG~~~--~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~ 315 (427)
T 3dyd_A 254 PILSCGGLAKRWLVPGWRLGWIL--IHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILC 315 (427)
T ss_dssp CEEEEEESTTTSSCGGGCCEEEE--EECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHH
T ss_pred cEEEEeeccccCCCcCcceEEEE--ecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHH
Confidence 79999999999999999999988 66431 123466666655543 46789999999998886
No 13
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.4e-38 Score=309.50 Aligned_cols=289 Identities=20% Similarity=0.291 Sum_probs=220.0
Q ss_pred CCCCCCCCccccchHhhccCC----CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 018820 51 HVVRAPEDPILGVTVAYNKDP----SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLS 126 (350)
Q Consensus 51 ~v~~~~~~~i~~~~~~~~~~~----~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~ai 126 (350)
.....++++++.+.++++++. +.++|+|++|.|.++++++.+.+.++++...+.. .....|.+..|.++||+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~y~~~~g~~~lr~~i 89 (418)
T 3rq1_A 12 AKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSD--SEHVGYAPIAGIPDFLCAA 89 (418)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCH--HHHHSCCCTTCCHHHHHHH
T ss_pred cCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcc--cccCCCCCCCChHHHHHHH
Confidence 344456678888887765432 3479999999997777778888888888766541 1235699999999999999
Q ss_pred HHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCC
Q 018820 127 AKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLN 206 (350)
Q Consensus 127 a~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 206 (350)
++++.+...+. .+++|++ |+|+++++.++ +.+++.+||+|++++|+|..|...++..|++++.+|+ +++++++|
T Consensus 90 a~~~~~~~~~~-~~~~i~~--t~g~~~al~~~--~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d 163 (418)
T 3rq1_A 90 EKECFGNFRPE-GHIRSIA--TAGGTGGIHHL--IHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSL-FDEHNNFN 163 (418)
T ss_dssp HHHHHGGGCCS-SEEEEEE--ESHHHHHHHHH--HHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECS-BCTTSSBC
T ss_pred HHHHhcccCcc-ccccEEE--CCchHHHHHHH--HHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEee-eCCCCCcC
Confidence 99976543221 1238888 99999999984 4556789999999999999999999999999999998 44457899
Q ss_pred HHHHHHHhhcC--CCCcEEEEecCC-CCCCCCCCCHHHHHHHHHHHH------hcCcEEEEccCCCCCCCCCCCCchHHH
Q 018820 207 FQGLLEDLGSA--PAGAIVLLHACA-HNPTGVDPTLQQWERIRQLMR------SKGLLPFFDSAYQGFASGSLDSDAQSV 277 (350)
Q Consensus 207 ~~~l~~~l~~~--~~~~~~l~~~~p-~NPTG~~~s~~~~~~i~~~~~------~~~~~ii~DeaY~~~~~~~~~~~~~~~ 277 (350)
++.+++.+++. ++...++++++| |||||.+++.+++++|+++|+ +||+++|+||+|.+|.+++ ....+.
T Consensus 164 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~--~~~~~~ 241 (418)
T 3rq1_A 164 HEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEK--DEVRAF 241 (418)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCH--HHHHGG
T ss_pred HHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCCh--HHHHHH
Confidence 99999998752 122447888899 999999999999999999999 8999999999999998753 111111
Q ss_pred -HHHhhcCCc--EEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 278 -RMFVADGGE--CFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 278 -~~~~~~~~~--vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
..+....++ +|+++||||.||++|+|+||++.++++++..+.+........+..+++++.++|.++..+|++
T Consensus 242 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 316 (418)
T 3rq1_A 242 FNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVAD 316 (418)
T ss_dssp GGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCC
Confidence 111112234 699999999999999999998832346655555544333334455678999999999888865
No 14
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=8e-39 Score=310.67 Aligned_cols=292 Identities=19% Similarity=0.287 Sum_probs=221.6
Q ss_pred cccCCCCCCCCccccchHhhccCC----CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHH
Q 018820 48 VFSHVVRAPEDPILGVTVAYNKDP----SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFN 123 (350)
Q Consensus 48 ~~~~v~~~~~~~i~~~~~~~~~~~----~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr 123 (350)
+..+....++++++.+.++++++. +.++|||++|.|.+..+++.+.+.++++...+. ....+.|.+..|.++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~--~~~~~~Y~~~~g~~~lr 85 (413)
T 3t18_A 8 IKRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMD--RSHIASYAPIEGEKDYR 85 (413)
T ss_dssp CTTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSC--HHHHHSCCCTTCCHHHH
T ss_pred hhhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcC--cccccCcCCCCCCHHHH
Confidence 345566677788988887765432 347999999999777777778888888877654 11235699999999999
Q ss_pred HHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCC
Q 018820 124 KLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATR 203 (350)
Q Consensus 124 ~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 203 (350)
+++++++.+...+. .+++|++ |+|+++++.++ +.+++.+||.|++++|+|..|...++..|++++.+|+ .++++
T Consensus 86 ~~la~~~~~~~~~~-~~~~i~~--t~g~~~al~~~--~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~ 159 (413)
T 3t18_A 86 KIVIDTLFGPYKPE-GYISAIA--TPGGTGAIRSA--IFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEF-FTDDF 159 (413)
T ss_dssp HHHHHHHHGGGCCS-SEEEEEE--ESHHHHHHHHH--HHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECC-BCTTS
T ss_pred HHHHHHHhcccCcc-ccCcEEE--cCccHHHHHHH--HHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeec-cCCCC
Confidence 99999976543221 2448888 99999999984 4556789999999999999999999999999999998 43447
Q ss_pred CCCHHHHHHHhhcC--CCCcEEEEecCC-CCCCCCCCCHHHHHHHHHHHH------hcCcEEEEccCCCCCCCCCCCCch
Q 018820 204 GLNFQGLLEDLGSA--PAGAIVLLHACA-HNPTGVDPTLQQWERIRQLMR------SKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 204 ~~d~~~l~~~l~~~--~~~~~~l~~~~p-~NPTG~~~s~~~~~~i~~~~~------~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++|++.+++.+++. ++.+.++++++| |||||.+++.+++++|+++|+ ++|+++|+||+|.+|.+++ ...
T Consensus 160 ~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~--~~~ 237 (413)
T 3t18_A 160 AFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDG--DQQ 237 (413)
T ss_dssp SBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSS--STT
T ss_pred CcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCCh--hhH
Confidence 89999999998752 122347788889 999999999999999999999 8999999999999999764 221
Q ss_pred HH-HHHHhhcCCc--EEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 275 QS-VRMFVADGGE--CFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 275 ~~-~~~~~~~~~~--vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
.+ ...+....++ +|+++||||.||++|+|+||++....+++..+.+........+..+++++.++|.++..+|++
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 315 (413)
T 3t18_A 238 RKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERA 315 (413)
T ss_dssp TGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSH
T ss_pred HHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcC
Confidence 22 2222222334 589999999999999999998822235554444444333333445677899999998887753
No 15
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=6.1e-38 Score=302.11 Aligned_cols=273 Identities=15% Similarity=0.146 Sum_probs=207.8
Q ss_pred CCCCCCCCccccchHhhccC--CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHH
Q 018820 51 HVVRAPEDPILGVTVAYNKD--PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAK 128 (350)
Q Consensus 51 ~v~~~~~~~i~~~~~~~~~~--~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~ 128 (350)
++...+++++..+...+++. .+++.|+|+.|.+ +.. +.+.+.++...... .. ...|.+..|.++||+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~-~~-~~~y~~~~g~~~lr~~ia~ 79 (385)
T 1b5p_A 7 RVQAMKPSATVAVNAKALELRRQGVDLVALTAGEP-DFD----TPEHVKEAARRALA-QG-KTKYAPPAGIPELREALAE 79 (385)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSC-SSC----CCHHHHHHHHHHHH-TT-CCSCCCTTCCHHHHHHHHH
T ss_pred HHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCC-CCC----CCHHHHHHHHHHHh-cC-CCCCCCCCCCHHHHHHHHH
Confidence 34445556666655543321 3467999999988 432 23455555444331 22 2469888899999999999
Q ss_pred HHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHH
Q 018820 129 LILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQ 208 (350)
Q Consensus 129 ~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 208 (350)
++.......+.+++|++ |+|+++++.++ +.+++.+||.|++++|+|+.|...++..|++++.+|+.+++++.+|++
T Consensus 80 ~~~~~~g~~~~~~~i~~--t~g~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 155 (385)
T 1b5p_A 80 KFRRENGLSVTPEETIV--TVGGSQALFNL--FQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPE 155 (385)
T ss_dssp HHHHTTCCCCCGGGEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHH
T ss_pred HHHHHhCCCCChHHEEE--cCChHHHHHHH--HHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHH
Confidence 97422221233789999 99999999984 445578999999999999999999999999999999832256789999
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 209 GLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 209 ~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
.+++.++++ ..++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ . ..++..+. . +++|
T Consensus 156 ~l~~~l~~~---~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~-~~~~~~~~-~-~~~i 227 (385)
T 1b5p_A 156 RVRRAITPR---TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG--E-HFSPGRVA-P-EHTL 227 (385)
T ss_dssp HHHTTCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS--C-CCCGGGTC-T-TTEE
T ss_pred HHHHhcCCC---CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--C-CCCHHHcC-C-CCEE
Confidence 999887643 3477888999999999999999999999999999999999999998853 1 12233332 2 6899
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++||||.||++|+|+||++ ++ +.+++++.........+++.+.|.++..+|++
T Consensus 228 ~~~s~SK~~~~~G~RiG~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 281 (385)
T 1b5p_A 228 TVNGAAKAFAMTGWRIGYAC--GP-----KEVIKAMASVSRQSTTSPDTIAQWATLEALTN 281 (385)
T ss_dssp EEEESTTTTTCGGGCCEEEE--CC-----HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHC
T ss_pred EEEechhhcCCcccceEEEE--eC-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC
Confidence 99999999999999999988 76 55666666666656678899999988888753
No 16
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=2.9e-35 Score=293.89 Aligned_cols=249 Identities=18% Similarity=0.180 Sum_probs=191.7
Q ss_pred cccHHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh-cCC
Q 018820 91 LVLNVVRKAEQQLVNDRS-RVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH-YHQ 168 (350)
Q Consensus 91 ~~~~~v~~a~~~l~~~~~-~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~-~~g 168 (350)
++.++++++.+.+...+. ....|.+..|.++||+++++++.......+.+++|++ |+|+++++.++. ..++ .+|
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~--t~G~~~al~~~~--~~l~~~~g 182 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFL--TDGASPGVHLMM--QLLIRNEK 182 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEE--ESSSHHHHHHHH--HHHCCSTT
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEE--cCCHHHHHHHHH--HHHcCCCC
Confidence 556788888776663222 4578999999999999999996322111234789999 999999998843 4445 699
Q ss_pred CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHH
Q 018820 169 RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLHACAHNPTGVDPTLQQWERI 245 (350)
Q Consensus 169 d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i 245 (350)
|.|++++|+|+.|...++..|++++.|++.++++|++|++.+++.+++. ..+..++++++||||||.+++.++|++|
T Consensus 183 d~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i 262 (500)
T 3tcm_A 183 DGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDI 262 (500)
T ss_dssp EEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHH
Confidence 9999999999999999999999999999944446899999999998762 1134467777999999999999999999
Q ss_pred HHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHh------hcCCcEEEEecccccc-CccCcceeEEEEeeCChhHHH
Q 018820 246 RQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV------ADGGECFIAQSYAKNL-GLYGERVGALSIVCKTADVAG 318 (350)
Q Consensus 246 ~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~------~~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~~~~~~~~ 318 (350)
+++|+++|+++|+||+|+++.+++. ....++..+. ....++|+++||||+| |++|+|+||++.+..+++.
T Consensus 263 ~~la~~~~~~li~Deay~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~-- 339 (500)
T 3tcm_A 263 VKFCKNEGLVLLADEVYQENIYVDN-KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPV-- 339 (500)
T ss_dssp HHHHHHHTCEEEEECTTTTCBCCTT-CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTH--
T ss_pred HHHHHHcCCEEEEecCccccccCCC-CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHH--
Confidence 9999999999999999999988531 1122332221 1223689999999999 9999999999843335444
Q ss_pred HHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 319 RVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 319 ~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++++.+.. ..+++++.++|.++..+|++
T Consensus 340 --~~~l~~~~-~~~~~~~~~~q~~~~~~l~~ 367 (500)
T 3tcm_A 340 --REQIYKIA-SVNLCSNITGQILASLVMNP 367 (500)
T ss_dssp --HHHHHHHH-HTTCCCCHHHHHHHHHHHSC
T ss_pred --HHHHHHHH-hcccCCCHHHHHHHHHHhcC
Confidence 44444443 35678999999999988864
No 17
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=292.03 Aligned_cols=255 Identities=15% Similarity=0.154 Sum_probs=195.3
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+++.|||+.|.+ +..+ .+.+.++........ ....|++..|.++||+++++++.......+.+++|++ |+|
T Consensus 55 ~~~~~i~l~~g~~-~~~~----~~~v~~a~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~--t~G 126 (447)
T 3b46_A 55 QGRELINLGQGFF-SYSP----PQFAIKEAQKALDIP-MVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTV--TTG 126 (447)
T ss_dssp TTSCCEECCCCSC-SSCC----CHHHHHHHHHHTTSG-GGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEE--ESH
T ss_pred cCCCeEEccCCCC-CCCC----CHHHHHHHHHHHhCc-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEE--eCC
Confidence 3568999999988 5432 345555555444221 2356999899999999999996322111133679999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-----------CCCCCHHHHHHHhhcCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-----------TRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-----------~~~~d~~~l~~~l~~~~~ 219 (350)
+++|+.++ +.+++.+||+|++++|+|..|...++..|++++.+|+ +++ ++++|++.+++.+..
T Consensus 127 ~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--- 200 (447)
T 3b46_A 127 ANEGILSC--LMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPI-NPPKELDQRNTRGEEWTIDFEQFEKAITS--- 200 (447)
T ss_dssp HHHHHHHH--HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEE-ECCGGGGTSCBCSTTSEECHHHHHTTCCT---
T ss_pred HHHHHHHH--HHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeC-CCccccccccccccCcccCHHHHHHhhcc---
Confidence 99999884 4455789999999999999999999999999999998 443 578999999988863
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH-hhcCCcEEEEeccccccC
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF-VADGGECFIAQSYAKNLG 298 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~-~~~~~~vi~~~S~SK~~g 298 (350)
+..++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ .. .++..+ ....++++++.||||.|+
T Consensus 201 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g--~~-~~~~~~~~~~~~~~i~i~S~sK~~~ 277 (447)
T 3b46_A 201 KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD--SF-TRIATLSPEIGQLTLTVGSAGKSFA 277 (447)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS--CC-CCGGGSCHHHHTTEEEEEEHHHHTT
T ss_pred CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC--CC-cCHHHcCCCCCCcEEEEecCchhcC
Confidence 33477788999999999999999999999999999999999999998864 11 122222 122358999999999999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++|||+||++ +.+ +++++.+.........+++.+.|.++...|+
T Consensus 278 ~~G~riG~~~--~~~----~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~ 321 (447)
T 3b46_A 278 ATGWRIGWVL--SLN----AELLSYAAKAHTRICFASPSPLQEACANSIN 321 (447)
T ss_dssp CTTSCCEEEE--CSC----HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred CcchhhEEEE--eCC----HHHHHHHHHHHhhccCCCChHHHHHHHHHHh
Confidence 9999999988 733 4555555555444455678888888777765
No 18
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.1e-35 Score=289.03 Aligned_cols=275 Identities=17% Similarity=0.161 Sum_probs=212.2
Q ss_pred cccccCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHH
Q 018820 46 DSVFSHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKL 125 (350)
Q Consensus 46 ~~~~~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~a 125 (350)
..+.+++...+++.+..+.+... .+++|+|+.|.+ +.. +.+.+.++.............|++..|.++||++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~l~~g~~-~~~----~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 75 (422)
T 3fvs_A 4 QLQARRLDGIDYNPWVEFVKLAS---EHDVVNLGQGFP-DFP----PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKI 75 (422)
T ss_dssp CCSCGGGTTCCCCHHHHHHHHHH---TSCCEECCCSSC-SSC----CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHH
T ss_pred hhHHHHhhccCccHHHHHHHHhh---cCCceEeCCCCC-CCC----CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHH
Confidence 34556677777777666655544 358999999998 432 3455556555544221113579888999999999
Q ss_pred HHHHH---hCCCCCCccC-CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-
Q 018820 126 SAKLI---LGADSPAIRE-NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP- 200 (350)
Q Consensus 126 ia~~~---~g~~~~~~~~-~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~- 200 (350)
+++++ +|.+.. + ++|++ |+|+++++.++ +..++.+||+|++++|+|..|...++..|++++.+|+ ++
T Consensus 76 la~~~~~~~g~~~~---~~~~i~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~ 147 (422)
T 3fvs_A 76 LASFFGELLGQEID---PLRNVLV--TVGGYGALFTA--FQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSL-KPG 147 (422)
T ss_dssp HHHHHHHHHTCCCC---HHHHEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-BCC
T ss_pred HHHHHHHhhCCCCC---CCCcEEE--ECChHHHHHHH--HHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEec-ccc
Confidence 99995 344332 5 68999 99999999884 3445789999999999999999999999999999998 43
Q ss_pred ----------CCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 201 ----------ATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 201 ----------~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.+|++.+++.+++. ..++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++
T Consensus 148 ~~~~G~~~~~~~~~~d~~~l~~~~~~~---~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~- 223 (422)
T 3fvs_A 148 PIQNGELGSSSNWQLDPMELAGKFTSR---TKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDG- 223 (422)
T ss_dssp CCCSSSCCBGGGSBCCHHHHHTTCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT-
T ss_pred cccccccccccCCCCCHHHHHhhcCCC---ceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-
Confidence 24668999999887643 4477888999999999999999999999999999999999999998864
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+...++..+....++++++.||||.||++|+|+||++ ++ +++++.+.........+++.+.|.++..+|+
T Consensus 224 -~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 293 (422)
T 3fvs_A 224 -HQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVL--GP-----DHIMKHLRTVHQNSVFHCPTQSQAAVAESFE 293 (422)
T ss_dssp -CCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEE--CC-----HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred -CCCCChhhcccccCcEEEEecchhccCCccceEEEEE--eC-----HHHHHHHHHHHhhccCCCCcHHHHHHHHHHh
Confidence 2222333332233589999999999999999999988 76 5666667666665566788899988887775
No 19
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1.6e-35 Score=285.25 Aligned_cols=274 Identities=14% Similarity=0.130 Sum_probs=207.7
Q ss_pred cCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 018820 50 SHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL 129 (350)
Q Consensus 50 ~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~ 129 (350)
+.+...+...+....+.+..+.+++.|||+.|.+ +.. ..+.+.+++.... . ....|++..|.++||++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~-~~~----~~~~v~~a~~~~~--~-~~~~y~~~~g~~~lr~~la~~ 78 (396)
T 3jtx_A 7 KQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEP-KHP----TPKVITDALTASL--H-ELEKYPLTAGLPELRQACANW 78 (396)
T ss_dssp HHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSC-CSC----CCHHHHHHHHHTG--G-GGGSCCCTTCCHHHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCC-CCC----CCHHHHHHHHHHh--h-hccCCCCCCCcHHHHHHHHHH
Confidence 3344333333333333444345778999999997 432 2456666665544 1 235698899999999999999
Q ss_pred Hh---CCCCCCccCC-cEEEEecCCchhHHHHHHHHHHHhcCC-----CEEEEcCCCCCChHHHHHHcCCeEEEEEeecC
Q 018820 130 IL---GADSPAIREN-RVTTVQCLSGTGSLRVGAEFLARHYHQ-----RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP 200 (350)
Q Consensus 130 ~~---g~~~~~~~~~-~v~~~~t~G~~~al~l~~~l~~~~~~g-----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~ 200 (350)
+. |.. .+.++ +|++ |+|+++++.++ +..+..+| |.|++++|+|..|...++..|++++.+|+ ++
T Consensus 79 l~~~~g~~--~~~~~~~i~~--t~g~~~al~~~--~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~ 151 (396)
T 3jtx_A 79 LKRRYDGL--TVDADNEILP--VLGSREALFSF--VQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PA 151 (396)
T ss_dssp HHHHTTTC--CCCTTTSEEE--ESSHHHHHHHH--HHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CT
T ss_pred HHHhcCCC--CCCCCCeEEE--cCCcHHHHHHH--HHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CC
Confidence 63 433 02267 9999 99999999884 44456786 79999999999999999999999999999 77
Q ss_pred CCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH
Q 018820 201 ATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280 (350)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~ 280 (350)
+++.+|++.+++.+.+. ..++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++. ........+
T Consensus 152 ~g~~~d~~~l~~~~~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~ 227 (396)
T 3jtx_A 152 PSFNPDWRSISEEVWKR---TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGN-KPLGCLQAA 227 (396)
T ss_dssp TTCCCCGGGSCHHHHHT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTC-CCCCHHHHH
T ss_pred CCCccCHHHHHHhhccC---cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCchHHhhh
Confidence 77889999999988763 34777789999999999999999999999999999999999999988641 111112111
Q ss_pred ---hhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 281 ---VADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 281 ---~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
....++++++.||||.|+++|+|+||++ ++ +++++++.........+++.++|.++..+|++
T Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 292 (396)
T 3jtx_A 228 AQLGRSRQKLLMFTSLSKRSNVPGLRSGFVA--GD-----AELLKNFLLYRTYHGSAMSIPVQRASIAAWDD 292 (396)
T ss_dssp HHTTCCCTTEEEEEESTTTSSCGGGCCEEEE--EC-----HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC
T ss_pred hhcccccCcEEEEeccccccCCcccceEEEE--eC-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC
Confidence 1124689999999999999999999987 76 56666666666555667899999998888764
No 20
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.8e-35 Score=291.59 Aligned_cols=262 Identities=16% Similarity=0.171 Sum_probs=190.7
Q ss_pred CeEEeecccccCCCCC----------------------ccccHHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHHH
Q 018820 74 VKLNLGVGAYRTEEGK----------------------PLVLNVVRKAEQQLVNDRS-RVKEYLPIVGLAEFNKLSAKLI 130 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~----------------------p~~~~~v~~a~~~l~~~~~-~~~~Y~p~~G~~~lr~aia~~~ 130 (350)
++|++.+|+|. ..+. .++...++++.+.+..... ....|++..|.++||+++++++
T Consensus 64 ~~i~~nig~p~-~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 142 (498)
T 3ihj_A 64 EVIRANIGDAQ-AMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYI 142 (498)
T ss_dssp SCBCCC-----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHH
T ss_pred hhhhcCCcCcc-cccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 79999999883 2221 1245566666555542221 3467999999999999999996
Q ss_pred h----CCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCC----EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCC
Q 018820 131 L----GADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQR----TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPAT 202 (350)
Q Consensus 131 ~----g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~ 202 (350)
. |.. +.+++|++ |+|+++++.++. ..++.+|| .|+++.|+|+.|...++..|++++.|++.+.++
T Consensus 143 ~~~~gG~~---~~~~~i~~--t~G~~~ai~~~~--~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~ 215 (498)
T 3ihj_A 143 TRRDGGVP---ADPDNIYL--TTGASDGISTIL--KILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENC 215 (498)
T ss_dssp HHHTTTCC---CCGGGEEE--ESSHHHHHHHHH--HHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGT
T ss_pred HHhcCCCC---CCcccEEE--cCCHHHHHHHHH--HHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecccccc
Confidence 5 343 34789999 999999998844 44567765 999999999999999999999999999944446
Q ss_pred CCCCHHHHHHHhhcCCC--CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH
Q 018820 203 RGLNFQGLLEDLGSAPA--GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280 (350)
Q Consensus 203 ~~~d~~~l~~~l~~~~~--~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~ 280 (350)
|++|++.+++.+++... +..+++++|||||||.+++.+++++|+++|+++|++||+||+|+++.+++. ....++..+
T Consensus 216 ~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~-~~~~s~~~~ 294 (498)
T 3ihj_A 216 WALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPD-CRFHSFKKV 294 (498)
T ss_dssp TBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTT-CCCCCHHHH
T ss_pred CCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCC-CCcCCHHHH
Confidence 89999999999876321 244677779999999999999999999999999999999999999998742 122233333
Q ss_pred hh-------cCCcEEEEecccccc-CccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 281 VA-------DGGECFIAQSYAKNL-GLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 281 ~~-------~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
.. ...++|+++||||.| |++|+|+||+++++.++ .+++++..... .+.+++.++|.++..++++
T Consensus 295 ~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~----~l~~~l~~~~~-~~~~~~~~~q~a~~~~l~~ 366 (498)
T 3ihj_A 295 LYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHP----EIKGQLVKLLS-VRLCPPVSGQAAMDIVVNP 366 (498)
T ss_dssp HHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCH----HHHHHHHHHHH-HSCCCCHHHHHHHHHHTCC
T ss_pred HHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCH----HHHHHHHHHHh-ccCCCCHHHHHHHHHHhcC
Confidence 21 224689999999999 89999999988544554 44444544443 5678899999999988864
No 21
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=6.3e-35 Score=282.34 Aligned_cols=269 Identities=14% Similarity=0.093 Sum_probs=206.5
Q ss_pred CCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH-
Q 018820 52 VVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI- 130 (350)
Q Consensus 52 v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~- 130 (350)
+...+++.+..+.+.. ..+++|+|+.|.+ +.. +.+.+.++...... ......|++..|.++||+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~---~~~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~-~~~~~~y~~~~g~~~l~~~la~~~~ 75 (410)
T 3e2y_A 5 IEGLDSNVWVEFTKLA---ADPSVVNLGQGFP-DIS----PPSYVKEELSKAAF-IDNMNQYTRGFGHPALVKALSCLYG 75 (410)
T ss_dssp GTTCCCCHHHHTTTTT---TSTTSEECSSCCC-CSC----CCHHHHHHHHHHHT-CGGGGSCCCTTCCHHHHHHHHHHHH
T ss_pred hccCCccHHHHHHHHh---cCCCeEEecCCCC-CCC----CCHHHHHHHHHHHh-CccccCCCCCCChHHHHHHHHHHHH
Confidence 4445555554444332 3468999999998 432 24556666555542 223457988899999999999995
Q ss_pred --hCCCCCCccC-CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeec--------
Q 018820 131 --LGADSPAIRE-NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYD-------- 199 (350)
Q Consensus 131 --~g~~~~~~~~-~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~-------- 199 (350)
+|.+.. + ++|++ |+|+++++.++ +..++.+||.|+++.|+|..|...++..|.+++.+++..
T Consensus 76 ~~~~~~~~---~~~~i~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~ 148 (410)
T 3e2y_A 76 KIYQRQID---PNEEILV--AVGAYGSLFNS--IQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKW 148 (410)
T ss_dssp HHHTSCCC---TTTSEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCC
T ss_pred HHhCCCCC---CCCCEEE--eCCcHHHHHHH--HHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccc
Confidence 344332 5 79999 99999999884 444578999999999999999999999999999999842
Q ss_pred -CCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH
Q 018820 200 -PATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR 278 (350)
Q Consensus 200 -~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~ 278 (350)
.+++.+|++.+++.++. +..++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ +...++.
T Consensus 149 ~~~~~~~d~~~l~~~~~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~ 223 (410)
T 3e2y_A 149 TSSDWTFDPRELESKFSS---KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTG--HTHVKIA 223 (410)
T ss_dssp BGGGEECCHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--CCCCCGG
T ss_pred cccCCcCCHHHHHhhcCC---CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCC--CCCCCHH
Confidence 13456899999988754 34477888999999999999999999999999999999999999998864 2222333
Q ss_pred HHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 279 MFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.+....++++++.||||.||++|+|+||++ ++ +++++++.........+++.+.|.++...|+
T Consensus 224 ~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 286 (410)
T 3e2y_A 224 TLPGMWERTITIGSAGKTFSVTGWKLGWSI--GP-----AHLIKHLQTVQQNSFYTCATPLQAALAEAFW 286 (410)
T ss_dssp GSTTCGGGEEEEEEHHHHSSCGGGCCEEEE--CC-----HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred HcCCccCeEEEEecchhhcCCCCceEEEEE--EC-----HHHHHHHHHHHHhhccCCChHHHHHHHHHHH
Confidence 333333589999999999999999999988 76 5666777666666666788899998888775
No 22
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.7e-34 Score=277.59 Aligned_cols=269 Identities=17% Similarity=0.209 Sum_probs=206.3
Q ss_pred CCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH--
Q 018820 53 VRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI-- 130 (350)
Q Consensus 53 ~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~-- 130 (350)
...+++++..+.+.+++. ++.|+|+.|.+ +.. +.+.+.++...... .. ...|++..|.++||+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~-~~-~~~y~~~~g~~~l~~~la~~~~~ 78 (389)
T 1gd9_A 8 ELVSASEIRKLFDIAAGM--KDVISLGIGEP-DFD----TPQHIKEYAKEALD-KG-LTHYGPNIGLLELREAIAEKLKK 78 (389)
T ss_dssp HHSCCCHHHHHHHHHHTC--SSCEECCCCSC-SSC----CCHHHHHHHHHHHH-TT-CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred HhCChhHHHHHHHHHhhh--cCeEecCCCCC-CCC----CCHHHHHHHHHHHh-CC-CCCCCCCCCcHHHHHHHHHHHHH
Confidence 334566777777766642 67999999988 422 24455555544432 22 346988889999999999996
Q ss_pred -hCCCCCCccCCc-EEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHH
Q 018820 131 -LGADSPAIRENR-VTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQ 208 (350)
Q Consensus 131 -~g~~~~~~~~~~-v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~ 208 (350)
+|.+.. +++ |++ |+|+++++.++ +.+.+.+||+|++++|+|+.+...++..|++++.+|+.+++++.+|++
T Consensus 79 ~~g~~~~---~~~~v~~--~~g~~~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 151 (389)
T 1gd9_A 79 QNGIEAD---PKTEIMV--LLGANQAFLMG--LSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVD 151 (389)
T ss_dssp HHCCCCC---TTTSEEE--ESSTTHHHHHH--HTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHH
T ss_pred HhCCCCC---CCCeEEE--cCChHHHHHHH--HHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHH
Confidence 354333 678 999 99999999884 344467899999999999999999999999999999832235778999
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 209 GLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 209 ~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
.+++.++++ ..++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ +...++..+.....+++
T Consensus 152 ~l~~~l~~~---~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~~i 226 (389)
T 1gd9_A 152 ELKKYVTDK---TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDD--ARHYSIASLDGMFERTI 226 (389)
T ss_dssp HHHHHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTT--CCCCCGGGSTTCGGGEE
T ss_pred HHHHhcCcC---ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCC--CCCCCHhhccCCCCCEE
Confidence 999988653 3467779999999999999999999999999999999999999998753 11122222221134799
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++.||||.+|++|+|+||++ ++ +++.+++.........+++.+.|.++..+|++
T Consensus 227 ~~~s~sK~~~~~G~r~G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 280 (389)
T 1gd9_A 227 TVNGFSKTFAMTGWRLGFVA--AP-----SWIIERMVKFQMYNATCPVTFIQYAAAKALKD 280 (389)
T ss_dssp EEEESTTTTTCGGGCCEEEE--CC-----HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTC
T ss_pred EEecChhhcCCcccceEEEE--EC-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence 99999999999999999988 76 46666666666555567888999988887764
No 23
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=7e-35 Score=281.49 Aligned_cols=279 Identities=16% Similarity=0.155 Sum_probs=200.7
Q ss_pred ccccCC--CCCCCCccccchHhhccCCCC-----CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCc
Q 018820 47 SVFSHV--VRAPEDPILGVTVAYNKDPSP-----VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGL 119 (350)
Q Consensus 47 ~~~~~v--~~~~~~~i~~~~~~~~~~~~~-----~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~ 119 (350)
+.|..+ +..|.++++...+.+..+..+ +.|||+.|++ +.. + +.+.|.++....... .....|.+..|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~g~~-~~~--~-~~~~v~~a~~~~~~~-~~~~~y~~~~g~ 80 (407)
T 3nra_A 6 AKFKKLGTDNAPGQEVRQSAAGLEALIRGAPIEGRPVDFSHGDV-DAH--E-PTPGAFDLFSAGVQS-GGVQAYTEYRGD 80 (407)
T ss_dssp HHHHTT---------------CCTTTCCSCCCCSCCEETTSCCT-TTS--C-CCTTHHHHHHHHHHH-THHHHSCCTTCC
T ss_pred hHHHhcCCCCCccHHHHHHhhhhHHHhhcCCCCCceeeecCcCC-CCC--C-CcHHHHHHHHHHHhc-CCCCCcCCCCCC
Confidence 344444 556666665555533332222 3699999988 321 1 234444444443311 112458888999
Q ss_pred HHHHHHHHHHH---hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEE
Q 018820 120 AEFNKLSAKLI---LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYR 196 (350)
Q Consensus 120 ~~lr~aia~~~---~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~ 196 (350)
.++|+++++++ +|.+..+ +++|++ |+|+++++.++ +.+++.+||+|+++.|+|..+...++..|++++.+|
T Consensus 81 ~~l~~~l~~~l~~~~g~~~~~--~~~i~~--~~g~~~a~~~~--~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~ 154 (407)
T 3nra_A 81 LGIRDLLAPRLAAFTGAPVDA--RDGLII--TPGTQGALFLA--VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQ 154 (407)
T ss_dssp HHHHHHHHHHHHHHHTSCCCT--TTSEEE--ESHHHHHHHHH--HHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCC--CCcEEE--eCCcHHHHHHH--HHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEee
Confidence 99999999985 5654321 379999 99999999884 444578999999999999999999999999999999
Q ss_pred ee----cCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 197 YY----DPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 197 ~~----~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+. +++++++|++.+++.+++.++ ++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ +
T Consensus 155 ~~~~~~~~~~~~~d~~~l~~~l~~~~~---~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g--~ 229 (407)
T 3nra_A 155 LDYVSADETRAGLDLTGLEEAFKAGAR---VFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAG--A 229 (407)
T ss_dssp BCCCSSCCSSCCBCHHHHHHHHHTTCC---EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTT--C
T ss_pred cccccccCcCCCcCHHHHHHHHhhCCc---EEEEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCC--C
Confidence 82 135688999999999987444 67778999999999999999999999999999999999999998864 2
Q ss_pred chHHHHHHh-hcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 273 DAQSVRMFV-ADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 273 ~~~~~~~~~-~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
...++..+. ...++++++.||||.+|++|+|+||++ ++ +++++++....+....+++.++|.++..+|+
T Consensus 230 ~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 299 (407)
T 3nra_A 230 SYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAF--GS-----RAIIARMEKLQAIVSLRAAGYSQAVLRGWFD 299 (407)
T ss_dssp CCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEE--EC-----HHHHHHHHHHHHHHTSSSCHHHHGGGGGTTC
T ss_pred CCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEE--cC-----HHHHHHHHHHHhhhccCCChHHHHHHHHHHh
Confidence 222333332 224589999999999999999999988 76 5677777777666667778888888777765
No 24
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=9.8e-35 Score=279.69 Aligned_cols=264 Identities=17% Similarity=0.172 Sum_probs=196.2
Q ss_pred CCCCCCCCccccch---HhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH
Q 018820 51 HVVRAPEDPILGVT---VAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSA 127 (350)
Q Consensus 51 ~v~~~~~~~i~~~~---~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia 127 (350)
++...+++++..+. .++.+ .+++.|||+.|.+ +.. +.+.+.++..... ......|.+..|.++||++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~i~l~~g~~-~~~----~~~~v~~a~~~~~--~~~~~~y~~~~g~~~lr~~ia 78 (391)
T 3h14_A 7 SRSAVDPFIVMDVMEAARRAEE-AGRRIIHMEVGQP-GTG----APRGAVEALAKSL--ETDALGYTVALGLPALRQRIA 78 (391)
T ss_dssp STTCCCCCTTHHHHHHHHHHHH-TTCCCEECCCSSC-SSC----SCHHHHHHHHHHH--C----------CCHHHHHHHH
T ss_pred hHhhcCcchHHHHHHHHHHHHh-cCCCeEEccCCCC-CCC----CCHHHHHHHHHHH--hcCCCCCCCCCChHHHHHHHH
Confidence 45555555554444 34444 4678999999987 322 2455666655544 122357988999999999999
Q ss_pred HHH---hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCC
Q 018820 128 KLI---LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 128 ~~~---~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
+++ +|... .+++|++ |+|+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+|+..+.++.
T Consensus 79 ~~~~~~~g~~~---~~~~v~~--t~g~~~al~~~--~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 151 (391)
T 3h14_A 79 RLYGEWYGVDL---DPGRVVI--TPGSSGGFLLA--FTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQ 151 (391)
T ss_dssp HHHHHHHCCCC---CGGGEEE--ESSHHHHHHHH--HHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTS
T ss_pred HHHHHHhCCCC---CHHHEEE--ecChHHHHHHH--HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence 995 35433 3789999 99999999984 44557899999999999999999999999999999983333577
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
+|++.+++. +++ ++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++. . ... ....
T Consensus 152 ~d~~~l~~~---~~~---~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~-~~~---~~~~ 219 (391)
T 3h14_A 152 PVPADFAGL---DLA---GLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK--A-VTA---LELT 219 (391)
T ss_dssp CCHHHHTTS---CCS---EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC--C-CCG---GGTC
T ss_pred CCHHHHHhc---CCe---EEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC--C-cCh---hhcC
Confidence 898888765 233 677889999999999999999999999999999999999999988642 1 111 1224
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+++++++||||.+|++|+|+||++ ++ +++.+++.........+++.++|.++...|+
T Consensus 220 ~~~i~~~s~sK~~g~~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 276 (391)
T 3h14_A 220 DECYVINSFSKYFSMTGWRVGWMV--VP-----EDQVRVVERIAQNMFICAPHASQVAALAALD 276 (391)
T ss_dssp SSSEEEEESSSTTCCTTSCCEEEE--CC-----GGGHHHHHHHHHHTTCCCCHHHHHHHHHHTT
T ss_pred CCEEEEEechhccCCccceeEEEE--eC-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHhC
Confidence 689999999999999999999988 76 3455666666666667888999888876664
No 25
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=2.1e-34 Score=281.26 Aligned_cols=271 Identities=16% Similarity=0.178 Sum_probs=201.2
Q ss_pred CCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHH----------HHHhhcCCCCCCCCCCCCcHH
Q 018820 52 VVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAE----------QQLVNDRSRVKEYLPIVGLAE 121 (350)
Q Consensus 52 v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~----------~~l~~~~~~~~~Y~p~~G~~~ 121 (350)
+...+++++..+.+...+ ..++.|+|+.|.| +.+..| ...+.++. .... ....|.+..|.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~G~p-~~~~~p--~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~G~~~ 82 (425)
T 2r2n_A 11 SAARNPSPIRTMTDILSR-GPKSMISLAGGLP-NPNMFP--FKTAVITVENGKTIQFGEEMMK----RALQYSPSAGIPE 82 (425)
T ss_dssp HHTCCCCSGGGHHHHHHH-SCTTCEECCCCCC-CGGGCS--EEEEEEEETTSCCEEECHHHHH----HHTSCCCTTCCHH
T ss_pred HhcCCCchHHHHHHHhhc-CCCCeEEcCCcCC-CchhCC--HHHHHHHHhhcccccccccchh----hhcCCCCCCCCHH
Confidence 444555666666665543 2367999999999 543222 11111000 0011 1246999999999
Q ss_pred HHHHHHHHH---hCCCCCCc----cCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 122 FNKLSAKLI---LGADSPAI----RENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 122 lr~aia~~~---~g~~~~~~----~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
||+++++++ +|....+. .+++|++ |+|+++++.++ +.+++.+||+|++++|+|..|...++..|++++.
T Consensus 83 lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~--t~G~~~al~~~--~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 158 (425)
T 2r2n_A 83 LLSWLKQLQIKLHNPPTIHYPPSQGQMDLCV--TSGSQQGLCKV--FEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIIN 158 (425)
T ss_dssp HHHHHHHHHHHHHCCTTTTSCGGGTCEEEEE--ESSHHHHHHHH--HHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHHHHHhcCCCCccccccCCcCcEEE--eCcHHHHHHHH--HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEE
Confidence 999999995 45432100 0268998 99999999884 4455789999999999999999999999999999
Q ss_pred EEeecCCCCCCCHHHHHHHhhcC----------CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSA----------PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~----------~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
+|+ +++ ++|++.+++.++.. ++.++++++++||||||.+++.+++++|+++|++||+++|+||+|.+
T Consensus 159 v~~-~~~--~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~ 235 (425)
T 2r2n_A 159 VAS-DES--GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYF 235 (425)
T ss_dssp ECE-ETT--EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGG
T ss_pred eCc-CCC--CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 998 543 58999999998731 12234556689999999999999999999999999999999999999
Q ss_pred CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHH
Q 018820 265 FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVA 344 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~ 344 (350)
|.+++ ....++..+ ...+++|++.||||.|+ +|+|+||++ ++ +++++++.........+++.++|.++.
T Consensus 236 ~~~~g--~~~~~~~~~-~~~~~~i~~~s~SK~~~-~GlRiG~~~--~~-----~~l~~~l~~~~~~~~~~~~~~~q~a~~ 304 (425)
T 2r2n_A 236 LQFNK--FRVPTFLSM-DVDGRVIRADSFSKIIS-SGLRIGFLT--GP-----KPLIERVILHIQVSTLHPSTFNQLMIS 304 (425)
T ss_dssp GBSSS--SCCCCTGGG-CTTSCEEEEEESTTTTC-STTCCEEEE--EE-----HHHHHHHHHHHHTTTCSSCHHHHHHHH
T ss_pred ccCCC--CCCCCcccc-CCCCCEEEEccchhhcc-CccceEEEe--cC-----HHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 88754 211223233 22358999999999999 999999988 77 567777776666666688999999988
Q ss_pred HHhc
Q 018820 345 AILR 348 (350)
Q Consensus 345 ~~L~ 348 (350)
.+|+
T Consensus 305 ~~l~ 308 (425)
T 2r2n_A 305 QLLH 308 (425)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 26
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.9e-34 Score=279.95 Aligned_cols=253 Identities=15% Similarity=0.142 Sum_probs=190.4
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccC-CcEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRE-NRVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~-~~v~~~ 146 (350)
.+.+.|||+.|.+ +.. ..+.+.++....... ...+.|++..|.++||+++++++ +|.+.. + ++|++
T Consensus 35 ~g~~~idl~~g~~-~~~----~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~---~~~~v~~- 104 (412)
T 2x5d_A 35 RGEDIIDLSMGNP-DGP----TPPHIVEKLCTVAQR-EDTHGYSTSRGIPRLRRAISHWYRDRYDVQID---PESEAIV- 104 (412)
T ss_dssp TTCCCEECSSCCC-CSC----CCHHHHHHHHHTC----------CTTCCHHHHHHHHHHHHHHHCCCCC---TTTSEEE-
T ss_pred cCCCEEecCCCCC-CCC----CCHHHHHHHHHHHhC-CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC---CCcCEEE-
Confidence 3567999999987 422 245666666554412 22456988899999999999996 354322 5 69999
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-CCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-TRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
|+|+++++.++. ...+.+||.|++++|+|+.+...++..|++++.+|+ +++ ++.+|++.+++.+..+++ +++
T Consensus 105 -t~g~~~a~~~~~--~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~i~~~~~---~v~ 177 (412)
T 2x5d_A 105 -TIGSKEGLAHLM--LATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPL-VPGIDFFNELERAIRESIPKPR---MMI 177 (412)
T ss_dssp -ESCHHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEEC-STTSCHHHHHHHHHHTEESCCS---EEE
T ss_pred -cCChHHHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeec-CCccCCCCCHHHHHHhcccCce---EEE
Confidence 999999999854 445789999999999999999999999999999998 543 455788999988865433 666
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCccee
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG 305 (350)
+++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ +...++..+....++++++.||||.||++|+|+|
T Consensus 178 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 255 (412)
T 2x5d_A 178 LGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDG--WKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIG 255 (412)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--CCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCE
T ss_pred ECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCChhhccCccCcEEEEecCccccCCcccceE
Confidence 78999999999999999999999999999999999999998743 2112232232113579999999999999999999
Q ss_pred EEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 306 ALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 306 ~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|++ ++ +++++++.........+++.++|.++..+|++
T Consensus 256 ~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 292 (412)
T 2x5d_A 256 FMV--GN-----PELVSALARIKSYHDYGTFTPLQVAAIAALEG 292 (412)
T ss_dssp EEE--EC-----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS
T ss_pred EEE--cC-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC
Confidence 988 75 45566665555444567888999988888764
No 27
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-33 Score=271.28 Aligned_cols=268 Identities=15% Similarity=0.192 Sum_probs=202.2
Q ss_pred CCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH
Q 018820 51 HVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI 130 (350)
Q Consensus 51 ~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~ 130 (350)
++...+.+ ++....++.+ .++.|+|+.|.+ +.. +.+.+.++....... . ...|.+..|.++||+++++++
T Consensus 11 ~~~~~~~~-~~~~~~~~~~--~~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~~-~-~~~y~~~~g~~~l~~~la~~l 80 (386)
T 1u08_A 11 KLPQLGTT-IFTQMSALAQ--QHQAINLSQGFP-DFD----GPRYLQERLAHHVAQ-G-ANQYAPMTGVQALREAIAQKT 80 (386)
T ss_dssp SCCCCCCC-HHHHHHHHHH--HTTCEECCCSSC-SSC----CCHHHHHHHHHHHHT-T-CCSCCCTTCCHHHHHHHHHHH
T ss_pred hhhcCCcc-HHHHHHHHHh--cCCeEEecCCCC-CCC----CCHHHHHHHHHHHHh-h-ccCCCCCCCCHHHHHHHHHHH
Confidence 34444443 3444444433 257899999988 422 245566665554422 2 356988889999999999996
Q ss_pred ---hCCCCCCccCC-cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCC
Q 018820 131 ---LGADSPAIREN-RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLN 206 (350)
Q Consensus 131 ---~g~~~~~~~~~-~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 206 (350)
+|.+.. ++ +|++ |+|+++++.++. .+++.+||.|++++|+|+.+...++..|++++.+|+ +++++++|
T Consensus 81 ~~~~g~~~~---~~~~v~~--~~g~~~a~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d 152 (386)
T 1u08_A 81 ERLYGYQPD---ADSDITV--TAGATEALYAAI--TALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMAL-QPPHFRVD 152 (386)
T ss_dssp HHHHSCCCC---TTTTEEE--ESSHHHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-CTTTCCCC
T ss_pred HHHhCCCCC---CCCCEEE--cCChHHHHHHHH--HHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeec-CcccCcCC
Confidence 565433 67 9999 999999998854 444789999999999999999999999999999998 55467899
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCc
Q 018820 207 FQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGE 286 (350)
Q Consensus 207 ~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~ 286 (350)
++.+++.+.. +..++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ....++..+....++
T Consensus 153 ~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~ 227 (386)
T 1u08_A 153 WQEFAALLSE---RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQ--QGHASVLAHPQLRER 227 (386)
T ss_dssp HHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCS--SCCCCGGGSHHHHTT
T ss_pred HHHHHHhhcc---cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCC--CCCcChhcccCccCc
Confidence 9999998854 23477788999999999999999999999999999999999999998754 111122222212357
Q ss_pred EEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 287 CFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 287 vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++++.||||.||++|+|+||++ ++ +++++++.........+++.+.|.++..+|+
T Consensus 228 ~i~~~s~sK~~~~~G~r~G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 282 (386)
T 1u08_A 228 AVAVSSFGKTYHMTGWKVGYCV--AP-----APISAEIRKVHQYLTFSVNTPAQLALADMLR 282 (386)
T ss_dssp EEEEEEHHHHTTCGGGCCEEEE--CC-----HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred EEEEecchhhcCCcccceEEEE--cC-----HHHHHHHHHHHHhhccCCChHHHHHHHHHHh
Confidence 9999999999999999999988 76 4556666555544445677888888877775
No 28
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=4.6e-34 Score=281.31 Aligned_cols=268 Identities=12% Similarity=0.174 Sum_probs=203.7
Q ss_pred CCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHHH--
Q 018820 54 RAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS-RVKEYLPIVGLAEFNKLSAKLI-- 130 (350)
Q Consensus 54 ~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~-~~~~Y~p~~G~~~lr~aia~~~-- 130 (350)
..++++|..+..... .++.|+|+.|.| +.. ..+.+.+.++......... ....|++..|.++||+++++++
T Consensus 60 ~~~~s~~~~~~~~~~---~~~~i~l~~g~p-~~~--~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 133 (448)
T 3aow_A 60 EMRASEVRELLKLVE---TSDIISLAGGLP-NPK--TFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGK 133 (448)
T ss_dssp HCCCCHHHHHHHHHH---TSSSEECCCCCC-CGG--GSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHhcc---CCCcEeCCCCCC-Cch--hCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHH
Confidence 344555544444333 467999999998 433 2345666666555442211 1256989999999999999996
Q ss_pred -hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHH
Q 018820 131 -LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQG 209 (350)
Q Consensus 131 -~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 209 (350)
+|.+ . +++|++ |+|+++++.++. ..++.+||.|++++|+|..+...++..|++++.+|+ +++ ++|++.
T Consensus 134 ~~g~~-~---~~~v~~--t~G~~~al~~~~--~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~--g~d~~~ 202 (448)
T 3aow_A 134 RYGIS-Q---DNDIMI--TSGSQQALDLIG--RVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPL-DDE--GMKVEI 202 (448)
T ss_dssp HHCCC-T---TSEEEE--ESSHHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEE-ETT--EECHHH
T ss_pred hcCcC-C---hhhEEE--eCcHHHHHHHHH--HHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEecc-CCC--CCCHHH
Confidence 2543 3 789999 999999998854 445789999999999999999999999999999998 553 589999
Q ss_pred HHHHhh----cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 210 LLEDLG----SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 210 l~~~l~----~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
+++.++ +..+.++++++++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ +...++..+ +...
T Consensus 203 L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g--~~~~~~~~~-~~~~ 279 (448)
T 3aow_A 203 LEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG--NPEKKIKAL-DNEG 279 (448)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSS--CCCCCTGGG-CTTS
T ss_pred HHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC--CCCcCHHhc-CCCC
Confidence 999987 422223344789999999999999999999999999999999999999998854 211223223 2235
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|++.||||.|+ +|+|+||++ ++ +++++++.........+++.++|.++..+|++
T Consensus 280 ~vi~~~S~SK~~~-~GlriG~v~--~~-----~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~ 335 (448)
T 3aow_A 280 RVIYLGTFSKILA-PGFRIGWMV--GD-----PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDG 335 (448)
T ss_dssp CEEEEEESTTTTC-GGGCCEEEE--EC-----HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHT
T ss_pred CEEEEccchhhcc-ccccEEEEE--eC-----HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 8999999999999 999999988 77 45666666555554556789999999888864
No 29
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=2.9e-34 Score=276.81 Aligned_cols=255 Identities=16% Similarity=0.203 Sum_probs=196.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEE
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS--RVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTV 146 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~--~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~ 146 (350)
.++.|||+.|.+ +.. +.+.+.++......... ....|.+..|.++||+++++++ +|.+. .+++|++
T Consensus 34 ~~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~---~~~~i~~- 104 (398)
T 3ele_A 34 KENVYDFSIGNP-SIP----APQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHF---NADNLYM- 104 (398)
T ss_dssp GGGCEECCSCCC-CSC----CCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCC---CGGGEEE-
T ss_pred CCCeEEeecCCC-CCC----CCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCC---ChHHEEE-
Confidence 357899999977 422 24555555555442211 0356989999999999999995 45433 3789999
Q ss_pred ecCCchhHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
|+|+++++.++ +..++.+| |+|++++|+|..|...++..|++++.+|+ +++++++|++.+++.++++ ..+++
T Consensus 105 -~~g~~~al~~~--~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l~~~---~~~v~ 177 (398)
T 3ele_A 105 -TMGAAASLSIC--FRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPA-DTEHFQIDFDALEERINAH---TRGVI 177 (398)
T ss_dssp -ESSHHHHHHHH--HHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECC-CTTTSSCCHHHHHHTCCTT---EEEEE
T ss_pred -ccCHHHHHHHH--HHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEec-CCcCCcCCHHHHHHHhCcC---CCEEE
Confidence 99999999884 44557899 99999999999999999999999999998 6667899999999988653 34778
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHh------cCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCc
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRS------KGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGL 299 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~------~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl 299 (350)
+++||||||.+++.+++++|+++|++ ||+++|+||+|.+|.+++ ...+. .....++++++.||||.+|+
T Consensus 178 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~--~~~~~---~~~~~~~~i~~~s~sK~~~~ 252 (398)
T 3ele_A 178 INSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDG--IKVPF---VTKYYDNTLVCYSYSKSLSL 252 (398)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTT--CCCCC---GGGTCSSEEEEEESTTTSSC
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCC--CCcCC---hHhhcCCeEEEEehhhcCCC
Confidence 89999999999999999999999999 999999999999998864 11111 22334689999999999999
Q ss_pred cCcceeEEEEeeCChhH-HHHHHHHHHHhhcc-cccCCChhHHHHHHHHhcC
Q 018820 300 YGERVGALSIVCKTADV-AGRVESQVKLVIRP-MYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 300 ~G~RvG~l~~v~~~~~~-~~~~~~~l~~~~~~-~~~~~~~~~q~i~~~~L~~ 349 (350)
+|+|+||++ +++.-. ...+...+...... .+.+++.+.|.++..++++
T Consensus 253 ~G~r~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 302 (398)
T 3ele_A 253 PGERIGYVL--VPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGA 302 (398)
T ss_dssp TTTCCEEEE--CCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTC
T ss_pred ccceeEEEE--EcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcC
Confidence 999999988 764311 11344444444333 2567888899888777654
No 30
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=9.9e-34 Score=273.04 Aligned_cols=267 Identities=16% Similarity=0.116 Sum_probs=204.1
Q ss_pred CCCCccccchHhhccC--CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH--
Q 018820 55 APEDPILGVTVAYNKD--PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI-- 130 (350)
Q Consensus 55 ~~~~~i~~~~~~~~~~--~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~-- 130 (350)
.+++++..+...+++. .+++.|+|+.|.+ +.. ..+.+.++...... . ....|++..|..+||+++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~-~-~~~~y~~~~g~~~lr~~la~~~~~ 93 (389)
T 1o4s_A 21 IPISKTMELDAKAKALIKKGEDVINLTAGEP-DFP----TPEPVVEEAVRFLQ-K-GEVKYTDPRGIYELREGIAKRIGE 93 (389)
T ss_dssp SCCCSSHHHHHHHHHHHHTTCCCEECCCSSC-SSC----CCHHHHHHHHHHHT-T-CCCCCCCTTCCHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHhcCCCEEEccCCCC-CCC----CCHHHHHHHHHHHh-c-CCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4445555555443321 3567899999988 322 24556666555442 2 2346988889999999999996
Q ss_pred -hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-CCCCCCHH
Q 018820 131 -LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP-ATRGLNFQ 208 (350)
Q Consensus 131 -~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~ 208 (350)
+|.+.. +++|++ |+|+++++.++. .+.+.+||+|++++|+|..+...++..|++++.+|+ ++ +++.+|++
T Consensus 94 ~~g~~~~---~~~v~~--~~g~t~al~~~~--~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~d~~ 165 (389)
T 1o4s_A 94 RYKKDIS---PDQVVV--TNGAKQALFNAF--MALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVET-FMSKNFQPSLE 165 (389)
T ss_dssp HHTCCCC---GGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-CGGGTTCCCHH
T ss_pred HhCCCCC---HHHEEE--ecCHHHHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEec-CCccCCCCCHH
Confidence 354323 689999 999999998854 444789999999999999999999999999999998 43 46789999
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 209 GLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 209 ~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
.+++.++++ ..++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ + ..++..+....++++
T Consensus 166 ~l~~~l~~~---~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g--~-~~~~~~~~~~~~~~i 239 (389)
T 1o4s_A 166 EVEGLLVGK---TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD--E-FTSILDVSEGFDRIV 239 (389)
T ss_dssp HHHHTCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS--C-CCCHHHHCSSSTTEE
T ss_pred HHHHhcccC---ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC--C-CCCHhhcCCCCCcEE
Confidence 999988653 3467789999999999999999999999999999999999999998753 1 122333322245799
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++.||||.+|++|+|+||++ ++ +++.+++.........+++.+.|.++..+|++
T Consensus 240 ~~~s~sK~~~~~G~r~G~l~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 293 (389)
T 1o4s_A 240 YINGFSKSHSMTGWRVGYLI--SS-----EKVATAVSKIQSHTTSCINTVAQYAALKALEV 293 (389)
T ss_dssp EEEESTTTTTCGGGCCEEEE--CC-----HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTC
T ss_pred EEeechhhcCCcccceEEEE--eC-----HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhc
Confidence 99999999999999999988 76 45666666665555567788899888888764
No 31
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=1.9e-33 Score=270.18 Aligned_cols=268 Identities=16% Similarity=0.128 Sum_probs=202.2
Q ss_pred CCCCccccchHhhcc--CCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh-
Q 018820 55 APEDPILGVTVAYNK--DPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL- 131 (350)
Q Consensus 55 ~~~~~i~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~- 131 (350)
.+++++..+...+++ ..+++.|+|+.|.+ +.. ..+.+.++...... .. ...|.+..|..+||+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~-~~-~~~y~~~~g~~~l~~~la~~~~~ 82 (388)
T 1j32_A 10 VSPSMTLIIDAKAKAMKAEGIDVCSFSAGEP-DFN----TPKHIVEAAKAALE-QG-KTRYGPAAGEPRLREAIAQKLQR 82 (388)
T ss_dssp SCCCSSTTTHHHHHHHHTTTCCCEECCCSSC-SSC----CCHHHHHHHHHHHH-TT-CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCCCEEECCCCCC-CCC----CCHHHHHHHHHHHh-cC-CCCCCCCCCCHHHHHHHHHHHHH
Confidence 344455555543321 13567999999988 422 23455555544431 22 3569888999999999999963
Q ss_pred --CCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHH
Q 018820 132 --GADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQG 209 (350)
Q Consensus 132 --g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 209 (350)
|.+.. +++|++ |+|+++++.++. .+.+.+||+|++++|+|+.+...++..|++++.+|...++++.+|++.
T Consensus 83 ~~g~~~~---~~~v~~--~~g~~~a~~~~~--~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 155 (388)
T 1j32_A 83 DNGLCYG---ADNILV--TNGGKQSIFNLM--LAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQ 155 (388)
T ss_dssp HHCCCCC---GGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHH
T ss_pred hcCCCCC---hhhEEE--cCCHHHHHHHHH--HHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHH
Confidence 54333 679999 999999999854 445789999999999999999999999999999998322357899999
Q ss_pred HHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh-cCCcEE
Q 018820 210 LLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA-DGGECF 288 (350)
Q Consensus 210 l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~-~~~~vi 288 (350)
+++.++++ ..++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ....++..+.. ...+++
T Consensus 156 l~~~l~~~---~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 230 (388)
T 1j32_A 156 IRQAITPK---TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDD--AQHLSIGAASPEAYERSV 230 (388)
T ss_dssp HHHHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--CCCCCGGGSCHHHHHTEE
T ss_pred HHHhcCcC---ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--CCCCCHHHccccccCCEE
Confidence 99988653 3477788999999999999999999999999999999999999998764 11112222211 124789
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++.||||.+|++|+|+||++ ++ +++.+++.........+++.++|.++..+|+
T Consensus 231 ~~~s~sK~~~~~G~r~G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 283 (388)
T 1j32_A 231 VCSGFAKTYAMTGWRVGFLA--GP-----VPLVKAATKIQGHSTSNVCTFAQYGAIAAYE 283 (388)
T ss_dssp EEEESTTTTTCTTTCCEEEE--CC-----HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHH
T ss_pred EEeechhccCCcccceEEEE--eC-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence 99999999999999999988 76 4566666666665566788889988777765
No 32
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.1e-35 Score=284.43 Aligned_cols=253 Identities=16% Similarity=0.148 Sum_probs=192.0
Q ss_pred CCCeEEeecccccCCCCCcccc-HHHHHHH--HHHh-hcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEe
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVL-NVVRKAE--QQLV-NDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQ 147 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~-~~v~~a~--~~l~-~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~ 147 (350)
.+.+|||+.|.| +.. .++. +.+.++. .... ........|++..|.++||+++++++ +. .+++|++
T Consensus 32 ~~~~i~~~~G~p-~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~-~~-----~~~~i~~-- 100 (427)
T 3ppl_A 32 KNLKLDLTRGKP-SSE--QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL-GV-----PVEQVLA-- 100 (427)
T ss_dssp TCCCEECCCCSC-CHH--HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH-TS-----CGGGEEE--
T ss_pred CCceEecCCCCC-ChH--HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh-CC-----CcceEEE--
Confidence 467899999998 422 1111 1344443 2222 11223567999999999999999997 32 2689999
Q ss_pred cCCchhHHH--HHHHHHHHhc--C----------CCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHH
Q 018820 148 CLSGTGSLR--VGAEFLARHY--H----------QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLED 213 (350)
Q Consensus 148 t~G~~~al~--l~~~l~~~~~--~----------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~ 213 (350)
|+|+++++. +++ .+++. + ||+|++++|+|..|...++..|++++.+|+ +++ ++|++.+++.
T Consensus 101 t~G~~~al~~~~~~--~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~-~~~--g~d~~~l~~~ 175 (427)
T 3ppl_A 101 GDASSLNIMFDVIS--WSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPM-NED--GPDMDAVEEL 175 (427)
T ss_dssp CSSCHHHHHHHHHH--HHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEE-ETT--EECHHHHHHH
T ss_pred eCCcHHHHHHHHHH--HHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCC-CCC--CCCHHHHHHH
Confidence 999999994 533 33344 5 899999999999999999999999999999 554 4999999998
Q ss_pred hhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHH-HhcCcEEEEccCCCCCCCCCCCCchHHHHHHh---hcCCcEEE
Q 018820 214 LGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLM-RSKGLLPFFDSAYQGFASGSLDSDAQSVRMFV---ADGGECFI 289 (350)
Q Consensus 214 l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~-~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~---~~~~~vi~ 289 (350)
++. ++.++++++++||||||.+++.+++++|+++| +++|+++|+||+|.++.+++......+...+. ...+++|+
T Consensus 176 l~~-~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 254 (427)
T 3ppl_A 176 VKN-PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWA 254 (427)
T ss_dssp TTS-TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEE
T ss_pred Hhc-CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEE
Confidence 842 22234445678999999999999999999999 99999999999999977754111111222221 23468999
Q ss_pred EeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++||||. +++|+|+||++ ++ +++++++.........+++.+.|.++..+|++
T Consensus 255 ~~S~SK~-~~~G~r~G~~~--~~-----~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 306 (427)
T 3ppl_A 255 FTSTSKI-TLAGAGVSFFL--TS-----AENRKWYTGHAGIRGIGPNKVNQLAHARYFGD 306 (427)
T ss_dssp EEESTTT-SCTTSSCEEEE--CC-----HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred Eechhhc-cCcCccEEEEE--cC-----HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 9999999 67999999988 77 56777777777666778999999999988875
No 33
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=2.1e-33 Score=268.62 Aligned_cols=263 Identities=14% Similarity=0.102 Sum_probs=199.5
Q ss_pred CCCccccchHhhcc-CCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---h
Q 018820 56 PEDPILGVTVAYNK-DPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---L 131 (350)
Q Consensus 56 ~~~~i~~~~~~~~~-~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~ 131 (350)
+++++..+.+.+++ +..++.|||+.|.+ +.. ..+.+.+++.... . ....|++..|.++||+++++++ +
T Consensus 5 ~~~~~~~~~~~~~~~~~~g~~i~l~~~~~-~~~----~~~~v~~a~~~~~--~-~~~~y~~~~g~~~lr~~la~~l~~~~ 76 (376)
T 3ezs_A 5 EPYPFERLRALLKEITPKKRGLDLGIGEP-QFE----TPKFIQDALKNHT--H-SLNIYPKSAFEESLRAAQRGFFKRRF 76 (376)
T ss_dssp CCCHHHHHHHHHTTCCCSSCCCBCSSCCC-CSC----CCHHHHHHHHTTG--G-GGGSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhhhccCCEEEeCCCCC-CCC----CCHHHHHHHHHhh--h-hcCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 34455555544432 12238999999987 322 2455666655543 1 2356988899999999999996 4
Q ss_pred CCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcC--CCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHH
Q 018820 132 GADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH--QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQG 209 (350)
Q Consensus 132 g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 209 (350)
|... .+++|++ |+|+++++.++ +..+..+ ||+|++++|+|..+...++..|++++.+|+ ++++ ++++ .
T Consensus 77 g~~~---~~~~i~~--t~g~~~al~~~--~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~-~~~~-~ 146 (376)
T 3ezs_A 77 KIEL---KENELIS--TLGSREVLFNF--PSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPL-TKEN-DFTP-S 146 (376)
T ss_dssp SCCC---CGGGEEE--ESSSHHHHHHH--HHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEEC-CGGG-TSCC-C
T ss_pred CCCC---CHHHEEE--CcCcHHHHHHH--HHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEccc-CCCC-Ccch-h
Confidence 5432 3789999 99999999884 3445778 999999999999999999999999999998 4331 2343 5
Q ss_pred HHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh-----cC
Q 018820 210 LLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA-----DG 284 (350)
Q Consensus 210 l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~-----~~ 284 (350)
+++.+.++++ ++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ .. .+...... ..
T Consensus 147 l~~~~~~~~~---~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~-~~~~~~~~~~~~~~~ 220 (376)
T 3ezs_A 147 LNEKELQEVD---LVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT--PP-PSLLEACMLAGNEAF 220 (376)
T ss_dssp CCHHHHHHCS---EEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS--CC-CCHHHHHHHTTCTTC
T ss_pred HHhhhccCCC---EEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC--CC-CCHHHcccccccccc
Confidence 6666655444 67778999999999999999999999999999999999999998864 11 22222222 35
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++++++.||||.+|++|+|+||++ ++ +++++++.........+++.++|.++...|++
T Consensus 221 ~~~i~~~s~sK~~g~~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 278 (376)
T 3ezs_A 221 KNVLVIHSLSKRSSAPGLRSGFIA--GD-----SRLLEKYKAFRAYLGYTSANAIQKASEAAWLD 278 (376)
T ss_dssp TTEEEEEESTTTTTCGGGCCEEEE--EC-----HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC
T ss_pred CcEEEEecchhccCCccceeEEEe--eC-----HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC
Confidence 689999999999999999999987 76 56777777766665667889999998888764
No 34
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=2e-34 Score=282.79 Aligned_cols=257 Identities=15% Similarity=0.182 Sum_probs=188.4
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.++++|||++|.+ +...+|.+.+.++++...+. .......|.+..|.++||+++++++. . ...+.+++|++ |+|
T Consensus 67 ~~~~~i~l~~g~~-~~~~~~~v~~a~~~~~~~~~-~~~~~~~y~~~~g~~~lr~~ia~~~~-~-g~~~~~~~i~~--t~G 140 (449)
T 3qgu_A 67 PDAKIISLGIGDT-TEPLPKYIADAMAKAAAGLA-TREGYSGYGAEQGQGALREAVASTFY-G-HAGRAADEIFI--SDG 140 (449)
T ss_dssp TTCCCEECSSCCC-CCCCCHHHHHHHHHHHHGGG-GSCCCCCSTTTTCCHHHHHHHHHHHH-T-TTTCCGGGEEE--ESC
T ss_pred CCCCEEEeeCCCC-CCCCCHHHHHHHHHHHHhhc-cccCCCCCCCCCCcHHHHHHHHHHHH-c-CCCCCHHHEEE--ccC
Confidence 4678999999977 44333222233333322221 11334679888999999999999975 2 11234789999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCe----------EEEEEeecCCCCCCCHHHHHHHhhcCCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLS----------VKSYRYYDPATRGLNFQGLLEDLGSAPAG 220 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~----------~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 220 (350)
+++++.++ .+++.+||.|++++|+|..|...++..|.+ ++.+|+.+.+++..|++.. ..+
T Consensus 141 ~~~al~~~---~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-- 210 (449)
T 3qgu_A 141 SKCDIARI---QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRT-- 210 (449)
T ss_dssp HHHHHHHH---HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCC--
T ss_pred HHHHHHHH---HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CCC--
Confidence 99999884 355789999999999999999999999999 9999984333455564332 222
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc
Q 018820 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY 300 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 300 (350)
+ ++++++||||||.+++.++|++|+++|+++|+++|+||+|.+|.+++ ....++..+....++++++.||||.||++
T Consensus 211 ~-~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 287 (449)
T 3qgu_A 211 D-IIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNP--DCPKTIYEIPGADEVAIETCSFSKYAGFT 287 (449)
T ss_dssp S-EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCT--TSCSSGGGSTTGGGTEEEEEECSGGGTCT
T ss_pred C-EEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCC--CCCCCHhhccCCCCcEEEEecchhhcCCc
Confidence 2 66667999999999999999999999999999999999999998864 22223333322345799999999999999
Q ss_pred CcceeEEEEeeCChhHHHH----HHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 301 GERVGALSIVCKTADVAGR----VESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 301 G~RvG~l~~v~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|+|+||++ ++++ ..+. +.+.+.......+++++.++|.++..+|++
T Consensus 288 G~r~G~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 337 (449)
T 3qgu_A 288 GVRLGWTV--VPKA-LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQP 337 (449)
T ss_dssp TCCCEEEE--CCTT-CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSH
T ss_pred cceeEEEe--cCHH-HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhh
Confidence 99999988 7632 2111 223445555566778999999988888763
No 35
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=5.1e-34 Score=276.73 Aligned_cols=252 Identities=13% Similarity=0.084 Sum_probs=195.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccC-CcEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRE-NRVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~-~~v~~~ 146 (350)
.+.+.|||+.|.+ +.. ..+.+.++....... .....|++..|.++||+++++++ +|.+.. + ++|++
T Consensus 45 ~g~~~idl~~g~~-~~~----~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~---~~~~v~~- 114 (404)
T 2o1b_A 45 GPLPLINMAVGIP-DGP----TPQGIIDHFQKALTI-PENQKYGAFHGKEAFKQAIVDFYQRQYNVTLD---KEDEVCI- 114 (404)
T ss_dssp CSSCCEECCCCSC-SSC----CCHHHHHHHHHHTTC-HHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCC---TTTSEEE-
T ss_pred CCCCEEecCCcCC-CCC----CCHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---CcccEEE-
Confidence 3456899999998 422 245566666554411 11346888789999999999996 365422 4 78999
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
|+|+++++.++. .+++.+||+|++++|+|..+...++..|++++.+|+ +++++.+|++.+++.++.+ ..++++
T Consensus 115 -t~G~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l~~~---~~~v~l 187 (404)
T 2o1b_A 115 -LYGTKNGLVAVP--TCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNL-EPPHYLPDWSKVDSQIIDK---TKLIYL 187 (404)
T ss_dssp -ESSHHHHHHHHH--HHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEEC-CTTTCCCCGGGSCHHHHHH---EEEEEE
T ss_pred -cCCcHHHHHHHH--HHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEecc-CcccCcCCHHHHHHhhccC---ceEEEE
Confidence 999999998854 445779999999999999999999999999999998 5556778999999988643 347777
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ .. .++..+....++++++.||||.||++|+|+||
T Consensus 188 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~ 264 (404)
T 2o1b_A 188 TYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA--KN-PSILASENGKDVAIEIYSLSKGYNMSGFRVGF 264 (404)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS--CC-CCGGGSTTHHHHEEEEEESTTTTTCGGGCCEE
T ss_pred cCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--CC-CChhhcCCCCCCEEEEEecchhccCchhheEe
Confidence 8999999999999999999999999999999999999998753 11 11212211124789999999999999999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ ++ +++++++.........+++.+.|.++..+|++
T Consensus 265 ~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 300 (404)
T 2o1b_A 265 AV--GN-----KDMIQALKKYQTHTNAGMFGALQDAAIYALNH 300 (404)
T ss_dssp EE--EC-----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred Ee--cC-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence 77 75 45666666655555567888999888887753
No 36
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=1.6e-33 Score=274.66 Aligned_cols=272 Identities=13% Similarity=0.078 Sum_probs=202.7
Q ss_pred cCCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHH
Q 018820 50 SHVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS-RVKEYLPIVGLAEFNKLSAK 128 (350)
Q Consensus 50 ~~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~-~~~~Y~p~~G~~~lr~aia~ 128 (350)
+++...+++ ++....++.. .++.|+|+.|.+ +.. +.+.+.++......... ....|++..|.++||+++++
T Consensus 17 ~~~~~~~~~-~~~~~~~~~~--~~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~ 88 (429)
T 1yiz_A 17 KRYQGSTKS-VWVEYIQLAA--QYKPLNLGQGFP-DYH----APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSK 88 (429)
T ss_dssp SSCCCCTTC-HHHHHHHHHH--HHCCEECCSSSC-SSC----CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHH
T ss_pred HHhhhCCch-HHHHHHHHhc--cCCEEEecCCCC-CCC----CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHH
Confidence 444444443 3343333332 346899999988 422 24555666555442211 23569888899999999999
Q ss_pred HH---hCCCCCCccCC-cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC---
Q 018820 129 LI---LGADSPAIREN-RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA--- 201 (350)
Q Consensus 129 ~~---~g~~~~~~~~~-~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~--- 201 (350)
++ +|.+.. ++ +|++ |+|+++++.++. ...+.+||.|++++|+|..+...++..|++++.+|+ +++
T Consensus 89 ~l~~~~g~~~~---~~~~v~~--~~g~~~a~~~~~--~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~ 160 (429)
T 1yiz_A 89 LYSQLVDRTIN---PMTEVLV--TVGAYEALYATI--QGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPL-KPNKTG 160 (429)
T ss_dssp HHHHHHTSCCC---TTTSEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-BCCCSS
T ss_pred HHHHHhCCCCC---CcCCEEE--ecChHHHHHHHH--HHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeC-Cccccc
Confidence 96 454333 67 9999 999999998844 444779999999999999999999999999999998 543
Q ss_pred ------CCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 202 ------TRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 202 ------~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
++++|++.+++.++. +..++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ ....
T Consensus 161 ~~~~~~~~~~d~~~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~ 235 (429)
T 1yiz_A 161 GTISSADWVLDNNELEALFNE---KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEP--FEHI 235 (429)
T ss_dssp SSEEGGGCBCCHHHHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--SCCC
T ss_pred ccccccCcccCHHHHHHHhcc---CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCC--CCCc
Confidence 467999999998863 33467778999999999999999999999999999999999999998754 2112
Q ss_pred HHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++..+.....+++++.||||.||++|+|+||++ ++ +++++++.........+++.+.|.++..+|++
T Consensus 236 ~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 302 (429)
T 1yiz_A 236 RICTLPGMWERTITIGSAGKTFSLTGWKIGWAY--GP-----EALLKNLQMVHQNCVYTCATPIQEAIAVGFET 302 (429)
T ss_dssp CGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEE--SC-----HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred ChhhccCCcCceEEEecchhccCCCCcceEEEE--eC-----HHHHHHHHHHHhhcccCCChHHHHHHHHHHhc
Confidence 222221123479999999999999999999988 76 45566666555444556788888888877753
No 37
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=6.2e-34 Score=277.82 Aligned_cols=264 Identities=20% Similarity=0.289 Sum_probs=195.5
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCc---EEEEec
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENR---VTTVQC 148 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~---v~~~~t 148 (350)
.++.|||+.|.+. ..+.++..+.++++.+.+. ......|++..|.++||+++++++.... ..+.+++ |++ |
T Consensus 46 ~~~~i~l~~g~~~-~~~~~~~~~~~~a~~~~~~--~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~--t 119 (430)
T 2x5f_A 46 KSTTYNATIGMAT-NKDGKMFASSLDAMFNDLT--PDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIV--T 119 (430)
T ss_dssp TTCSEECCCSSCE-ETTEECCCHHHHTTBSSCC--GGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEE--E
T ss_pred CCCcEEeeeeecc-CCCCchhhHHHHHHHHhcC--cccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEE--c
Confidence 3578999999882 1121221122333333222 1124579888899999999999964222 1223677 888 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH-cCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL-AGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
+|+++++.++. .+++.+||+|++++|+|..+...++. .|++++.+|+ +++++++|++.+++.+++.+.+..+++++
T Consensus 120 ~g~~~al~~~~--~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~ 196 (430)
T 2x5f_A 120 NALTHGLSLVG--DLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPI-FDKDGHYTTDSLVEALQSYNKDKVIMILN 196 (430)
T ss_dssp SHHHHHHHHHH--HHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECC-BCTTSCBCSHHHHHHHHHCCSSEEEEEEC
T ss_pred CCchHHHHHHH--HHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEec-cCccCCcCHHHHHHHHHhcCCCCEEEEEc
Confidence 99999999854 45578999999999999999999999 9999999998 54337899999999997643345577889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHh-----cCcEEEEccCCCCCCCCCCCCchHHHH-HHhhcCCc---EEEEeccccccC
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRS-----KGLLPFFDSAYQGFASGSLDSDAQSVR-MFVADGGE---CFIAQSYAKNLG 298 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~-----~~~~ii~DeaY~~~~~~~~~~~~~~~~-~~~~~~~~---vi~~~S~SK~~g 298 (350)
+||||||.+++.+++++|+++|++ +|+++|+||+|.+|.+++ ....++. .+....++ +|++.||||.||
T Consensus 197 ~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 274 (430)
T 2x5f_A 197 YPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYED--VYTQSLFTALTNLHSNAILPIRLDGATKEFF 274 (430)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSS--SCCSCHHHHHHTTCCTTEEEEEEEEHHHHTT
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCc--ccchHHHHHHhhccCCcceEEEEEecccCCC
Confidence 999999999999999999999999 999999999999998764 2112332 34332457 999999999999
Q ss_pred ccCcceeEEEEee--CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 299 LYGERVGALSIVC--KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 299 l~G~RvG~l~~v~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++|+|+||++ + ++++..+.+........+..+.+++.++|.++..+|+
T Consensus 275 ~~G~riG~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 275 AWGFRVGFMT--FGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp CGGGCCEEEE--EBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred CCCCCeEEEE--EecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 9999999988 6 3444433333322222222567899999999998886
No 38
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.4e-34 Score=279.68 Aligned_cols=261 Identities=16% Similarity=0.146 Sum_probs=200.8
Q ss_pred chHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCcc
Q 018820 63 VTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIR 139 (350)
Q Consensus 63 ~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~ 139 (350)
....+..+.+++.|+|+.|.+ +.. +.+.+.++....... .....|.+..|..+||+++++++. |.. +.
T Consensus 34 ~~~~~~~~~g~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~~la~~~~~~~g~~---~~ 104 (437)
T 3g0t_A 34 LVTNLEKATGTKFCRMEMGVP-GLP----APQIGIETEIQKLRE-GVASIYPNLDGLPELKQEASRFAKLFVNID---IP 104 (437)
T ss_dssp HHHHHHHHHTCCCEECCCCSC-CSC----CCHHHHHHHHHHHHH-TGGGSCCCTTCCHHHHHHHHHHHHHHHCCC---CC
T ss_pred HHHHHHHhcCCCEEeccCcCC-CCC----CCHHHHHHHHHHHhC-CcCcCCCCCCChHHHHHHHHHHHHHhhCCC---CC
Confidence 333333334678999999998 422 245555555544322 222679999999999999999954 443 33
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh--cCCC--EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH--YHQR--TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~--~~gd--~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
+++|++ |+|+++++.++ +.++. .+|| +|++++|+|..+...++..|++++.+++ +++++.+|++.+++.++
T Consensus 105 ~~~i~~--t~g~t~al~~~--~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l~ 179 (437)
T 3g0t_A 105 ARACVP--TVGSMQGCFVS--FLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDL-FEYRGEKLREKLESYLQ 179 (437)
T ss_dssp GGGEEE--ESHHHHHHHHH--HHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEG-GGGCTTHHHHHHHHHHT
T ss_pred cccEEE--eCCHHHHHHHH--HHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEee-cCCCCccCHHHHHHHHh
Confidence 789999 99999999884 44456 8999 9999999999999999999999999999 66667899999999994
Q ss_pred -cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch---HHH-HHHhhcCCcEEEE
Q 018820 216 -SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA---QSV-RMFVADGGECFIA 290 (350)
Q Consensus 216 -~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~---~~~-~~~~~~~~~vi~~ 290 (350)
.+++ ++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++. ... +++ ..+....++++++
T Consensus 180 ~~~~~---~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~ 255 (437)
T 3g0t_A 180 TGQFC---SIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD-YSHPGEPLYQPSVANYTDNYILA 255 (437)
T ss_dssp TTCCC---EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC-CCSTTSSCCCCCGGGTCSCEEEE
T ss_pred cCCce---EEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC-cCcccccchhhccCCCCCcEEEE
Confidence 3333 677789999999999999999999999999999999999999887631 111 000 2232335689999
Q ss_pred eccccccCccCcceeEEEEeeCChhHHHHHHH-H-----------------HHHhhcccccCCChhHHHHHHHHhc
Q 018820 291 QSYAKNLGLYGERVGALSIVCKTADVAGRVES-Q-----------------VKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 291 ~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~-~-----------------l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.||||.+|++|+|+||++ ++ +.+++ + +.........+++.++|.++..+|+
T Consensus 256 ~s~sK~~~~~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (437)
T 3g0t_A 256 LSSSKAFSYAGQRIGVLM--IS-----GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLK 324 (437)
T ss_dssp EESTTTTSCGGGCCEEEE--EC-----HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHH
T ss_pred EcCccCCCCccceeEEEE--EC-----HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHh
Confidence 999999999999999988 76 45555 4 5555555567889999999888775
No 39
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-33 Score=270.88 Aligned_cols=268 Identities=17% Similarity=0.163 Sum_probs=198.3
Q ss_pred CCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH
Q 018820 51 HVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI 130 (350)
Q Consensus 51 ~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~ 130 (350)
++...+++. +....++.+ .++.|+|+.|.+ +.. +.+.+.++......+ . ...|.+..|.++||+++++++
T Consensus 6 ~~~~~~~~~-~~~~~~~~~--~~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~~-~-~~~y~~~~g~~~l~~~la~~~ 75 (411)
T 2o0r_A 6 RLRPYATTV-FAEMSALAT--RIGAVNLGQGFP-DED----GPPKMLQAAQDAIAG-G-VNQYPPGPGSAPLRRAIAAQR 75 (411)
T ss_dssp GGGGGSSCH-HHHHHHHHH--TTTCEESSCSSC-SSC----CCHHHHHHHHHHHHT-T-CCSCCCTTCCHHHHHHHHHHH
T ss_pred HhHhcCccH-HHHHHHHhh--cCCeeeccCcCC-CCC----CCHHHHHHHHHHHhc-C-CCCCCCCCCCHHHHHHHHHHH
Confidence 334444433 344444443 356899999988 422 234555555554422 2 356988899999999999995
Q ss_pred ---hCCCCCCccCC-cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC--CCC
Q 018820 131 ---LGADSPAIREN-RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA--TRG 204 (350)
Q Consensus 131 ---~g~~~~~~~~~-~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~--~~~ 204 (350)
+|.+.. ++ +|++ |+|+++++.++. .+.+.+||+|++++|+|..+...++..|++++.+|+ +++ ++.
T Consensus 76 ~~~~g~~~~---~~~~v~~--t~g~~~al~~~~--~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~ 147 (411)
T 2o0r_A 76 RRHFGVDYD---PETEVLV--TVGATEAIAAAV--LGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPL-VPDGRGFA 147 (411)
T ss_dssp HHHHCCCCC---TTTSEEE--EEHHHHHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-EEETTEEE
T ss_pred HHHcCCCCC---CCceEEE--eCCHHHHHHHHH--HHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeec-cccccCCC
Confidence 354433 66 8999 999999998853 445789999999999999999999999999999998 433 466
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG 284 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
+|++.+++.++.+ ..++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ +...++..+....
T Consensus 148 ~d~~~l~~~l~~~---~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~ 222 (411)
T 2o0r_A 148 LDADALRRAVTPR---TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDH--ARHLPLAGFDGMA 222 (411)
T ss_dssp CCHHHHHHHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTT--CCCCCGGGSTTTG
T ss_pred CCHHHHHHhhccC---ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC--CCCcChhhccCCC
Confidence 8999999988643 3477788999999999999999999999999999999999999998753 2112232221123
Q ss_pred CcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 285 GECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 285 ~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.+++++.||||.+|++|+|+||++ ++ +++.+.+.........+++.+.|.++..+|+
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~ 279 (411)
T 2o0r_A 223 ERTITISSAAKMFNCTGWKIGWAC--GP-----AELIAGVRAAKQYLSYVGGAPFQPAVALALD 279 (411)
T ss_dssp GGEEEEEEHHHHTTCTTTCEEEEE--CC-----HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHH
T ss_pred CCEEEEeechhhcCCccceEEEEe--eC-----HHHHHHHHHHHhhccCCCChHHHHHHHHHHh
Confidence 579999999999999999999988 75 4455555554443334566777777776664
No 40
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=4.4e-33 Score=270.30 Aligned_cols=277 Identities=20% Similarity=0.192 Sum_probs=199.7
Q ss_pred ccccchHhhccCC-CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhC-----
Q 018820 59 PILGVTVAYNKDP-SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILG----- 132 (350)
Q Consensus 59 ~i~~~~~~~~~~~-~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g----- 132 (350)
++..+...+.+.. .++.|+|+.|.|. ..+...+.+.+.++....... .....|++..|.++||+++++++..
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~l~~g~p~-~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~~~~~lr~~la~~~~~~~~~~ 95 (416)
T 1bw0_A 18 PIRTVSDNAKPSPSPKPIIKLSVGDPT-LDKNLLTSAAQIKKLKEAIDS-QECNGYFPTVGSPEAREAVATWWRNSFVHK 95 (416)
T ss_dssp HHHHHHHTCCCCCSCSCCEECCCCCTT-TTSCSCCCHHHHHHHHHHHHT-TCSSSCCCTTCCHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHhhcCCCeEEecCcCCC-cccCCCCCHHHHHHHHHHhhC-CccCCcCCCCCCHHHHHHHHHHHHhhhccc
Confidence 4444444333211 2568999999872 111123345555555544422 2345798888999999999999751
Q ss_pred -CCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHH
Q 018820 133 -ADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLL 211 (350)
Q Consensus 133 -~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~ 211 (350)
.....+.+++|++ |+|+++++.+++ ..++.+||+|++++|+|+.|...++..|++++.+++.+.+++.+|++.++
T Consensus 96 ~~~~~~~~~~~v~~--~~g~~~al~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 171 (416)
T 1bw0_A 96 EELKSTIVKDNVVL--CSGGSHGILMAI--TAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIR 171 (416)
T ss_dssp TTTGGGCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHH
T ss_pred ccCCCCCCcceEEE--eCChHHHHHHHH--HHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHH
Confidence 1222234789999 999999998844 44578999999999999999999999999999999833335779999999
Q ss_pred HHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC--chHHHHHHhhcCCcEEE
Q 018820 212 EDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS--DAQSVRMFVADGGECFI 289 (350)
Q Consensus 212 ~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~--~~~~~~~~~~~~~~vi~ 289 (350)
+.++.+ ..++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++... ...++..+ ....++++
T Consensus 172 ~~l~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~-~~~~~~i~ 247 (416)
T 1bw0_A 172 RLKDDK---TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF-ETTVPRVI 247 (416)
T ss_dssp HHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS-CCSCCEEE
T ss_pred HHhccC---CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHc-cCCCcEEE
Confidence 988643 3467788899999999999999999999999999999999999988764100 11122222 12236899
Q ss_pred EeccccccCccCcceeEEEEeeCCh-hHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTA-DVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+.||||.|+++|+|+||++ ++++ +..+.+...++..... ..+++.++|.++..+|+
T Consensus 248 ~~s~sK~~~~~Glr~G~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~ 304 (416)
T 1bw0_A 248 LGGTAKNLVVPGWRLGWLL--YVDPHGNGPSFLEGLKRVGML-VCGPCTVVQAALGEALL 304 (416)
T ss_dssp EEESTTTTSCGGGCCEEEE--EECTTCSCHHHHHHHHHHHHH-HTCSCHHHHHHHHHHHH
T ss_pred EecchhhCCCCCceEEEEE--eeCchhhHHHHHHHHHHHhcc-ccCCCcHHHHHHHHHHh
Confidence 9999999999999999988 7764 4444555444433222 33678889988888775
No 41
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=2.3e-33 Score=268.71 Aligned_cols=251 Identities=17% Similarity=0.107 Sum_probs=194.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCC-cEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIREN-RVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~-~v~~~ 146 (350)
++.+.|||+.|.+ +.. ..+.+.++....... .....|++..|..+||+++++++ +|.+.. ++ +|++
T Consensus 23 ~g~~~idl~~~~~-~~~----~~~~v~~a~~~~~~~-~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~---~~~~v~~- 92 (376)
T 2dou_A 23 RGVGLIDLSIGST-DLP----PPEAPLKALAEALND-PTTYGYCLKSCTLPFLEEAARWYEGRYGVGLD---PRREALA- 92 (376)
T ss_dssp TTCCCEECSSCCC-CCC----CCHHHHHHHHHHTTC-GGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCC---TTTSEEE-
T ss_pred cCCCEEeccCCCC-CCC----CCHHHHHHHHHHHhC-CCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCccEEE-
Confidence 4567999999988 422 245566666555422 22456877679999999999996 365432 45 8999
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
|+|+++++.++. .++..+||+|++++|+|..+...++..|++++.+|+ ++++.+|++.+++.+..+ ..++++
T Consensus 93 -~~g~~~a~~~~~--~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~---~~~v~l 164 (376)
T 2dou_A 93 -LIGSQEGLAHLL--LALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWRE---AKVLLL 164 (376)
T ss_dssp -ESSHHHHHHHHH--HHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHH---EEEEEE
T ss_pred -cCCcHHHHHHHH--HHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccC---ceEEEE
Confidence 999999998843 445678999999999999999999999999999988 445678999999888643 347777
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ .. .+...+....++++++.||||.||++|+|+||
T Consensus 165 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~--~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 241 (376)
T 2dou_A 165 NYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG--EA-PSPLALPGAKERVVELFSLSKSYNLAGFRLGF 241 (376)
T ss_dssp CSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS--CC-CCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEE
T ss_pred CCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--CC-CChhhcCCCCCcEEEEecchhhcCChhheeEE
Confidence 8999999999999999999999999999999999999998753 11 11111212235799999999999999999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ ++ +++.+++.........+++.+.|.++..+|++
T Consensus 242 ~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 277 (376)
T 2dou_A 242 AL--GS-----EEALARLERVKGVIDFNQYAGVLRMGVEALKT 277 (376)
T ss_dssp EE--EC-----HHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTS
T ss_pred Ee--cC-----HHHHHHHHHHHHhcccCCCHHHHHHHHHHHhC
Confidence 87 76 45666666655544456788899888888764
No 42
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=3.2e-32 Score=263.25 Aligned_cols=253 Identities=18% Similarity=0.280 Sum_probs=194.1
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEe
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQ 147 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~ 147 (350)
+.+.|||+.|.+ +..+ .+.+.+.++........ .... |++..|..+||+++++++ +|.+.. +++|++
T Consensus 33 g~~~idl~~g~~-~~~~--~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~---~~~v~~-- 103 (407)
T 2zc0_A 33 GVKLISLAAGDP-DPEL--IPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVS---PENIVI-- 103 (407)
T ss_dssp SCCCEECCSCCC-CTTT--SCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCC---GGGEEE--
T ss_pred CCceEeCCCCCC-Cchh--CCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCC---cceEEE--
Confidence 337899999988 4332 23556666655543221 1235 888889999999999996 454333 689999
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhh----cCCCCcEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLG----SAPAGAIV 223 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~----~~~~~~~~ 223 (350)
|+|+++++.++. .+.+.+||+|++++|+|..+...++..|++++.+|. +++ ++|++.+++.++ +.++.+++
T Consensus 104 t~g~t~a~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~--~~d~~~l~~~l~~~~~~~~~~~~v 178 (407)
T 2zc0_A 104 TIGGTGALDLLG--RVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPV-DND--GMRVDLLEEKIKELKAKGQKVKLI 178 (407)
T ss_dssp ESHHHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEE-ETT--EECHHHHHHHHHHHHHTTCCEEEE
T ss_pred ecCHHHHHHHHH--HHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEccc-CCC--CCCHHHHHHHHHhhhcccCCceEE
Confidence 999999998854 444679999999999999999999999999999998 553 489999999887 42222334
Q ss_pred EEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcc
Q 018820 224 LLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGER 303 (350)
Q Consensus 224 l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R 303 (350)
+++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ ....++..+ ...++++++.||||.++ +|+|
T Consensus 179 ~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~-~~~~~~i~~~s~sK~~~-~G~r 254 (407)
T 2zc0_A 179 YTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEG--GDIVPLKAL-DNEGRVIVAGTLSKVLG-TGFR 254 (407)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSC--SSCCCGGGG-CSSCCEEEEEESTTTTC-TTSC
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCC--CCCCChhhc-CCCCCEEEEcccccccC-CCcc
Confidence 4689999999999999999999999999999999999999998753 221223233 22247999999999999 9999
Q ss_pred eeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 304 VGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 304 vG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+||++ ++ +++.+++.........+++.+.|.++..+|++
T Consensus 255 ~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 293 (407)
T 2zc0_A 255 IGWII--AE-----GEILKKVLMQKQPIDFCAPAISQYIALEYLKR 293 (407)
T ss_dssp CEEEE--CC-----HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHT
T ss_pred eEEEe--cC-----HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHc
Confidence 99988 76 45666666655555556788999988888764
No 43
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=5.5e-33 Score=271.26 Aligned_cols=255 Identities=16% Similarity=0.188 Sum_probs=183.9
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+.++|+|++|++ +...++.+.+.++++...+. .......|.+..|.++||+++++|+.. . ..+.+++|++ |+|+
T Consensus 55 ~~~~i~l~~~~~-~~~~~~~v~~a~~~~~~~~~-~~~~~~~y~~~~g~~~l~~~ia~~~~~-~-~~~~~~~i~~--t~G~ 128 (432)
T 3ei9_A 55 DAQVISLGIGDT-TEPIPEVITSAMAKKAHELS-TIEGYSGYGAEQGAKPLRAAIAKTFYG-G-LGIGDDDVFV--SDGA 128 (432)
T ss_dssp TCCCEECSSCCC-CSCCCHHHHHHHHHHHHHTT-STTTCCCCCCTTCCHHHHHHHHHHHHT-T-TTCCGGGEEE--ESCH
T ss_pred CCCeEEccCCCC-CCCCCHHHHHHHHHHHhccc-ccCCccCCCCCCCCHHHHHHHHHHHHc-c-CCCCcceEEE--CCCh
Confidence 457999999988 54433333333333333222 112335798889999999999999752 1 1234789999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCC------------eEEEEEeecCCCCCCCHHHHHHHhhcCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGL------------SVKSYRYYDPATRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~------------~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 219 (350)
++++.++ .+++.+||.|++++|+|..|...++..|. +++.+++.+.+++..|++. .++
T Consensus 129 ~~al~~l---~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~ 198 (432)
T 3ei9_A 129 KCDISRL---QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-------VGR 198 (432)
T ss_dssp HHHHHHH---HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-------CCC
T ss_pred HHHHHHH---HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-------CCC
Confidence 9999863 34578999999999999999999988884 6888888333344555432 122
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGL 299 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl 299 (350)
..++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ ...++..+....+++|++.||||.||+
T Consensus 199 -~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK~~g~ 274 (432)
T 3ei9_A 199 -TDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDD---NPRSIFEIPGAEEVAMETASFSNYAGF 274 (432)
T ss_dssp -CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS---CCSSGGGSTTGGGTEEEEEESHHHHCT
T ss_pred -CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCC---CCCChhhcCCCCCeEEEEecchhccCC
Confidence 2266778999999999999999999999999999999999999998763 112333332223579999999999999
Q ss_pred cCcceeEEEEeeCChhH---HHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 300 YGERVGALSIVCKTADV---AGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 300 ~G~RvG~l~~v~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+|+|+||++ +++... ...+++.+.......+++++.++|.++..+|.
T Consensus 275 ~G~r~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (432)
T 3ei9_A 275 TGVRLGWTV--IPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLT 324 (432)
T ss_dssp TTTCCEEEE--CCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSS
T ss_pred cccceEEEE--EChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHh
Confidence 999999988 774320 00124555555555677889999998877764
No 44
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=1.8e-32 Score=265.56 Aligned_cols=267 Identities=15% Similarity=0.118 Sum_probs=196.0
Q ss_pred ccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCC
Q 018820 59 PILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADS 135 (350)
Q Consensus 59 ~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~ 135 (350)
.++ ...++.+ .+++.|+|+.|.+....- + ..+.+.++...... .. ...|++..|.++||+++++++ +|.+.
T Consensus 26 ~~~-~~~~~~~-~g~~~i~l~~~~~~~~~~-~-~~~~v~~a~~~~~~-~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~ 99 (406)
T 1xi9_A 26 VVL-PARELEK-KGIKVIRLNIGDPVKFDF-Q-PPEHMKEAYCKAIK-EG-HNYYGDSEGLPELRKAIVEREKRKNGVDI 99 (406)
T ss_dssp ----CHHHHHH-TTCCCEECCCCCGGGTTC-C-CCHHHHHHHHHHHH-TT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred HHH-HHHHHHH-cCCCEEEecCCCCCcCCC-C-CCHHHHHHHHHHHh-cC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCC
Confidence 444 5555554 357899999998821011 1 23455555444331 22 246988889999999999996 34333
Q ss_pred CCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 136 PAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 136 ~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
.+++|++ |+|+++|+.++. .+.+.+||+|++++|+|..+...++..|++++.+|+.+++++.+|++.+++.++
T Consensus 100 ---~~~~v~~--t~g~~~al~~~~--~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 172 (406)
T 1xi9_A 100 ---TPDDVRV--TAAVTEALQLIF--GALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKIT 172 (406)
T ss_dssp ---CGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCC
T ss_pred ---CHHHEEE--cCChHHHHHHHH--HHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhC
Confidence 3689999 999999998854 444789999999999999999999999999999998332457789999999886
Q ss_pred cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCc-EEEEeccc
Q 018820 216 SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGE-CFIAQSYA 294 (350)
Q Consensus 216 ~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~S 294 (350)
++ ..++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ...++..+ . .++ +|++.|||
T Consensus 173 ~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~---~~~~~~~~-~-~~~~~i~~~s~s 244 (406)
T 1xi9_A 173 DR---TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG---EHISPGSL-T-KDVPVIVMNGLS 244 (406)
T ss_dssp TT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS---CCCCHHHH-C-SSSCEEEEEEST
T ss_pred cC---ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC---CCCCHHHc-C-CCceEEEEeccc
Confidence 53 3467778999999999999999999999999999999999999998742 11233333 2 457 99999999
Q ss_pred cccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 295 KNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
|.+|++|+|+||+++. .+++...++.+++....... .+++.+.|.++..+|+
T Consensus 245 K~~~~~G~r~G~~~~~-~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~ 296 (406)
T 1xi9_A 245 KVYFATGWRLGYMYFV-DPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLT 296 (406)
T ss_dssp TTTCCGGGCCEEEEEE-CTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHH
T ss_pred cccCCCccEEEEEEEe-cCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHh
Confidence 9999999999997632 33300014444454444433 5678888988888874
No 45
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=3.3e-32 Score=266.14 Aligned_cols=263 Identities=17% Similarity=0.207 Sum_probs=197.8
Q ss_pred hccCCCC-CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCC----------CCCCCCCCCcHHHHHHHHHHHhC--C
Q 018820 67 YNKDPSP-VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSR----------VKEYLPIVGLAEFNKLSAKLILG--A 133 (350)
Q Consensus 67 ~~~~~~~-~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~----------~~~Y~p~~G~~~lr~aia~~~~g--~ 133 (350)
|..+.+| ..|+|+++.. +...+.++++++........ ...|.+..|.++||+++++++.. .
T Consensus 31 y~~~~~p~~~i~lg~~~~------~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~ 104 (435)
T 3piu_A 31 YHEVHNTNGIIQMGLAEN------QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRG 104 (435)
T ss_dssp CBTTTBTTSBEECSSCCC------CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTT
T ss_pred CCcccCCCCeEEeccccc------cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhC
Confidence 4444444 4789998765 44577777777664411111 14599999999999999999641 1
Q ss_pred CCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCCeEEEEEeecCCCCCCCHHHHHH
Q 018820 134 DSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGLSVKSYRYYDPATRGLNFQGLLE 212 (350)
Q Consensus 134 ~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~ 212 (350)
....+.+++|++ |+|+++|+.++ +.++..+||.|++++|+|..+...+. ..|++++.+++.+..++.+|++.+++
T Consensus 105 ~~~~~~~~~v~~--~~gg~~a~~~~--~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 180 (435)
T 3piu_A 105 NKVTFDPNHLVL--TAGATSANETF--IFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEE 180 (435)
T ss_dssp TSSCCCGGGEEE--EEHHHHHHHHH--HHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHH
T ss_pred CCCCCCHHHEEE--cCChHHHHHHH--HHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHH
Confidence 111234789999 99999999884 44557899999999999999998888 78999999998444457899999999
Q ss_pred HhhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc------
Q 018820 213 DLGSA---PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD------ 283 (350)
Q Consensus 213 ~l~~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~------ 283 (350)
.+++. ..+..++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ +...+...+..+
T Consensus 181 ~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~--~~~~~~~~~~~~~~~d~~ 258 (435)
T 3piu_A 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSS--PSFISVMEVLKDRNCDEN 258 (435)
T ss_dssp HHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS--SCCCCHHHHHHC------
T ss_pred HHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCcCHHHhccccccccc
Confidence 98751 2234578889999999999999999999999999999999999999987764 222233333332
Q ss_pred ---CCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 284 ---GGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 284 ---~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
.++++++.||||.||++|+|+||++ +++++ +.+.+..... +.+.+.+.|.++..+|++
T Consensus 259 ~~~~~~~i~i~s~sK~~g~~G~r~G~~~--~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 319 (435)
T 3piu_A 259 SEVWQRVHVVYSLSKDLGLPGFRVGAIY--SNDDM----VVAAATKMSS--FGLVSSQTQHLLSAMLSD 319 (435)
T ss_dssp -CGGGGEEEEEESSSSSCCGGGCEEEEE--ESCHH----HHHHHHHHGG--GSCCCHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEEeeecccCCCceeEEEEE--eCCHH----HHHHHHHHhh--cCCCCHHHHHHHHHHhcC
Confidence 4689999999999999999999988 86543 3444443332 345678888888877764
No 46
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=3.1e-32 Score=265.73 Aligned_cols=255 Identities=13% Similarity=0.164 Sum_probs=193.8
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCCcEEEEe
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIRENRVTTVQ 147 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~~v~~~~ 147 (350)
.++.|||+.|.+ +..+ .+.+.+.++........ .....|.+..|.++||+++++++. |.. .+.+++|++
T Consensus 42 ~~~~idl~~g~~-~~~~--~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~--~~~~~~v~~-- 114 (425)
T 1vp4_A 42 DKDAISFGGGVP-DPET--FPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGIT--GLDEDNLIF-- 114 (425)
T ss_dssp STTCEECCCCSC-CGGG--SCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCC--SCCGGGEEE--
T ss_pred CCCceeCCCCCC-Cccc--CCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCC--CCCcccEEE--
Confidence 467899999987 4332 23555666655544211 112569888899999999999963 432 022689999
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-----CCCcE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA-----PAGAI 222 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-----~~~~~ 222 (350)
|+|+++++.++ +.++..+||+|++++|+|..+...++..|++++.+|. +++ ++|++.+++.+++. ..+..
T Consensus 115 t~G~~~al~~~--~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~--~~d~~~l~~~l~~~~~~~~~~~~~ 189 (425)
T 1vp4_A 115 TVGSQQALDLI--GKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPL-EDD--GMDLNVLERKLSEFDKNGKIKQVK 189 (425)
T ss_dssp EEHHHHHHHHH--HHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEE-ETT--EECHHHHHHHHHHHHHTTCGGGEE
T ss_pred eccHHHHHHHH--HHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEecc-CCC--CCCHHHHHHHHHhhhhcccCCCce
Confidence 99999999884 3455789999999999999999999999999999998 553 48999999988651 01223
Q ss_pred EE-EecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccC
Q 018820 223 VL-LHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG 301 (350)
Q Consensus 223 ~l-~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G 301 (350)
++ ++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ +...++..+ ...+++|++.||||.|+ +|
T Consensus 190 ~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~-~~~~~~i~~~s~sK~~~-~G 265 (425)
T 1vp4_A 190 FIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG--ETVDPIFKI-GGPERVVLLNTFSKVLA-PG 265 (425)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSS--CCCCCHHHH-HCTTTEEEEEESTTTTC-GG
T ss_pred EEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC--CCCcCHHHh-CCCCCEEEEeccccccc-cc
Confidence 44 689999999999999999999999999999999999999998754 211233333 23358999999999999 99
Q ss_pred cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 302 ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 302 ~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+|+||++ ++ +++++.+.........+++.++|.++..+|++
T Consensus 266 ~r~G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 306 (425)
T 1vp4_A 266 LRIGMVA--GS-----KEFIRKIVQAKQSADLCSPAITHRLAARYLER 306 (425)
T ss_dssp GCEEEEE--CC-----HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred cceEEEe--eC-----HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhc
Confidence 9999988 76 45555555555444456788999988888753
No 47
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.5e-33 Score=273.15 Aligned_cols=264 Identities=16% Similarity=0.165 Sum_probs=186.4
Q ss_pred CCccccchHhhc-cCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHH--
Q 018820 57 EDPILGVTVAYN-KDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS---RVKEYLPIVGLAEFNKLSAKLI-- 130 (350)
Q Consensus 57 ~~~i~~~~~~~~-~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~---~~~~Y~p~~G~~~lr~aia~~~-- 130 (350)
++.|..+..++. ...++++|+|+.|.| +. .|.+.+.++++...+..++. ....|.+..|.++||+++|+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 90 (417)
T 3g7q_A 14 HSGITRLMEDLNDGLRTPGAIMLGGGNP-AH--IPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRE 90 (417)
T ss_dssp --CHHHHHHHHHC-----CCEECSCCCC-CC--CHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhhccCCCceEecCcCC-CC--CChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHH
Confidence 445666665554 335678999999988 43 24445777777776652221 1246999999999999999996
Q ss_pred -hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCC-----EEEEc-CCCCCChHHHHHH------cCCeEEEEEe
Q 018820 131 -LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQR-----TIYIP-QPTWGNHPKVFTL------AGLSVKSYRY 197 (350)
Q Consensus 131 -~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd-----~Vlv~-~P~y~~~~~~~~~------~G~~~~~v~~ 197 (350)
+|.... +++|++ |+|+++|+.+++ ..+..+|| .|+++ +|+|..|...+.. .+..+..++.
T Consensus 91 ~~g~~~~---~~~i~~--t~G~t~al~~~~--~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (417)
T 3g7q_A 91 TLGWDIE---PQNIAL--TNGSQSAFFYLF--NLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPE 163 (417)
T ss_dssp HHCCCCC---GGGEEE--ESCHHHHHHHHH--HHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGG
T ss_pred HhCCCCC---cccEEE--eCCcHHHHHHHH--HHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCC
Confidence 454433 789999 999999999954 44577877 89997 9999998776532 2333444432
Q ss_pred ecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHH
Q 018820 198 YDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSV 277 (350)
Q Consensus 198 ~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~ 277 (350)
+..++.+|++.++ +. ++..++++++||||||.+++.+++++|+++|++||+++|+||+|..+..+....+..
T Consensus 164 -~~~~~~~d~~~l~--~~---~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~-- 235 (417)
T 3g7q_A 164 -GQFKYHVDFEHLH--IG---EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEAR-- 235 (417)
T ss_dssp -GEEEEECCGGGCC--CC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCC--
T ss_pred -cccccccCHHHhc--cc---cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccc--
Confidence 2123568888887 33 335588899999999999999999999999999999999999998754321000100
Q ss_pred HHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
....+++|++.|||| ++++|+|+||++ ++ +++.+++.........+++.++|.++..+|++
T Consensus 236 ---~~~~~~~i~~~s~sK-~~~~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 296 (417)
T 3g7q_A 236 ---PLWNPNIILCMSLSK-LGLPGSRCGIII--AN-----DKTITAIANMNGIISLAPGGMGPAMMCEMIKR 296 (417)
T ss_dssp ---CCCCTTEEEEEESGG-GTCTTSCCEEEE--CC-----HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHT
T ss_pred ---cCCCCCEEEEEechh-ccCCCcceEEEE--eC-----HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcC
Confidence 112458999999999 788999999987 76 56777777776666677889999998888764
No 48
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2e-32 Score=261.70 Aligned_cols=247 Identities=13% Similarity=0.095 Sum_probs=192.4
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccCCcEEEEec
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIRENRVTTVQC 148 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~~~v~~~~t 148 (350)
+.+.|||+.|.+ +.. +.+.+.++...... . ....|++ .| .++|+++++++. |.. +.+++|++ |
T Consensus 22 g~~~idl~~~~~-~~~----~~~~v~~a~~~~~~-~-~~~~y~~-~~-~~lr~~la~~~~~~~~~~---~~~~~i~~--t 87 (377)
T 3fdb_A 22 GQGVLPLWVAES-DFS----TCPAVLQAITDAVQ-R-EAFGYQP-DG-SLLSQATAEFYADRYGYQ---ARPEWIFP--I 87 (377)
T ss_dssp CTTSEECCSSCC-CSC----CCHHHHHHHHHHHH-T-TCCSSCC-SS-CCHHHHHHHHHHHHHCCC---CCGGGEEE--E
T ss_pred CCCeeeecccCC-CCC----CCHHHHHHHHHHHH-c-CCCCCCC-CC-HHHHHHHHHHHHHHhCCC---CCHHHEEE--e
Confidence 567999999976 322 24455555554441 2 2356988 88 899999999954 433 23789999 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecC
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC 228 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~ 228 (350)
+|+++++.++ +..+..+||+|+++.|+|..+...++..|++++.+|+ +++ +|++.+++.++++++ ++++++
T Consensus 88 ~g~~~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~---~d~~~l~~~l~~~~~---~v~i~~ 158 (377)
T 3fdb_A 88 PDVVRGLYIA--IDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDA-TGG---INLHDVEKGFQAGAR---SILLCN 158 (377)
T ss_dssp SCHHHHHHHH--HHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEEC-TTS---CCHHHHHHHHHTTCC---EEEEES
T ss_pred CChHHHHHHH--HHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccC-CCC---CCHHHHHHHhccCCC---EEEEeC
Confidence 9999999884 3455789999999999999999999999999999998 543 899999999987544 788899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ ++...++..+.. .++++++.||||.+|++|+|+||++
T Consensus 159 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~ 236 (377)
T 3fdb_A 159 PYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDG-QHTVAAGVSDTA-ASVCITITAPSKAWNIAGLKCAQII 236 (377)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSCHHH-HHHEEEEECSTTTTTCGGGCCEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCC-CCCcccHHHccC-CCcEEEEEeChHhccCcchhheEEE
Confidence 99999999999999999999999999999999999988763 011122222222 3579999999999999999999988
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++++ .+.+.+.........+++.++|.++...|++
T Consensus 237 --~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 271 (377)
T 3fdb_A 237 --FSNP----SDAEHWQQLSPVIKDGASTLGLIAAEAAYRY 271 (377)
T ss_dssp --CCSH----HHHHHHHHSCHHHHCCCCHHHHHHHHHHHHH
T ss_pred --eCCH----HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhc
Confidence 7654 4555555555555567888999887777653
No 49
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=5.6e-33 Score=270.92 Aligned_cols=263 Identities=14% Similarity=0.125 Sum_probs=191.3
Q ss_pred ccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHH-HHh-hcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCC
Q 018820 59 PILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQ-QLV-NDRSRVKEYLPIVGLAEFNKLSAKLILGADSP 136 (350)
Q Consensus 59 ~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~-~l~-~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~ 136 (350)
.++....++.+ ...+|||+.|.| +...-+. .+.+.++.. .+. ........|++..|.++||+++++++ +.
T Consensus 20 ~~~~~~~~l~~--~~~~i~l~~g~~-~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~-~~--- 91 (422)
T 3d6k_A 20 EVTAKYAELKA--KNLSLDLTRGKP-SAEQLDL-SNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL-GL--- 91 (422)
T ss_dssp HHHHHHHHHHH--TTCCEECCCCSC-CHHHHHT-TGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH-TC---
T ss_pred HHHHHHHHHhc--cCCeEeCCCCCC-ChhhCCC-cHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh-CC---
Confidence 34455555544 235899999998 4110011 222333322 211 01123467999999999999999997 32
Q ss_pred CccCCcEEEEecCCchhHH--HHHHHHHHHhcC------------CCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCC
Q 018820 137 AIRENRVTTVQCLSGTGSL--RVGAEFLARHYH------------QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPAT 202 (350)
Q Consensus 137 ~~~~~~v~~~~t~G~~~al--~l~~~l~~~~~~------------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~ 202 (350)
.+++|++ |+|+++++ .+++. .+..+ +|+|++++|+|+.|...++..|++++.+|+ +++
T Consensus 92 --~~~~i~~--t~G~~~al~l~~~~~--~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~- 163 (422)
T 3d6k_A 92 --PADLVVA--QDGSSLNIMFDLISW--SYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPM-TDE- 163 (422)
T ss_dssp --CGGGEEE--CSSCHHHHHHHHHHH--HHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEE-ETT-
T ss_pred --ChhHEEE--ecchHHHHHHHHHHH--HhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCC-CCC-
Confidence 2689999 99999997 45332 22344 358999999999999999999999999999 554
Q ss_pred CCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHH-hcCcEEEEccCCCC--CCCCCCCCchHHHHH
Q 018820 203 RGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMR-SKGLLPFFDSAYQG--FASGSLDSDAQSVRM 279 (350)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~-~~~~~ii~DeaY~~--~~~~~~~~~~~~~~~ 279 (350)
++|++.+++.++.. +.++++++++||||||.+++.+++++|+++|+ ++|+++|+||+|.+ |.+++ ....++..
T Consensus 164 -g~d~~~l~~~l~~~-~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~--~~~~~~~~ 239 (422)
T 3d6k_A 164 -GPDMGVVRELVKDP-QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEF--PIVHNVIE 239 (422)
T ss_dssp -EECHHHHHHHHTST-TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC--CCCCCHHH
T ss_pred -CCCHHHHHHHHhcC-CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCC--CCCcChhh
Confidence 49999999988642 11334448999999999999999999999999 99999999999986 54432 11122322
Q ss_pred H---hhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 280 F---VADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 280 ~---~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ ....+++|++.||||. +++|+|+||++ ++ +++++++.........+++.++|.++..+|++
T Consensus 240 ~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~--~~-----~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 304 (422)
T 3d6k_A 240 FAQAAGNPNRFWFMSSTSKI-THAGSGVSFFA--SS-----KENIEWYASHANVRGIGPNKLNQLAHAQFFGD 304 (422)
T ss_dssp HHHHTTCTTCEEEEEESTTT-SCTTSSCEEEE--CC-----HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCS
T ss_pred HhhccCCCCcEEEEcChhhh-cCcccceEEEE--eC-----HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhC
Confidence 2 1234689999999998 77999999988 77 56677777766666677899999999988875
No 50
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=4.8e-32 Score=260.00 Aligned_cols=242 Identities=22% Similarity=0.223 Sum_probs=187.4
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
++.|||+.|.+ +.. +.+.+.++...... . ...|.+..|.++||+++++++ +.+ +++|++ |+|++
T Consensus 25 ~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~-~--~~~y~~~~~~~~l~~~la~~~-~~~-----~~~v~~--~~g~~ 88 (381)
T 1v2d_A 25 LGAVNLGQGFP-SNP----PPPFLLEAVRRALG-R--QDQYAPPAGLPALREALAEEF-AVE-----PESVVV--TSGAT 88 (381)
T ss_dssp HTCEECCCCSC-SSC----CCHHHHHHHHHHTT-T--SCSCCCTTCCHHHHHHHHHHH-TSC-----GGGEEE--ESSHH
T ss_pred CCeEEecCCCC-CCC----CCHHHHHHHHHHHH-H--hcCCCCCCCCHHHHHHHHHhc-CCC-----hhhEEE--cCChH
Confidence 56899999988 432 24555555555441 2 346988889999999999994 432 568888 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeec--CCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYD--PATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~--~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++.++. ...+.+||+|++++|+|..+...++..|++++.+|. + ++++.+|++.+++.+..+ ..++++++||
T Consensus 89 ~a~~~~~--~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~ 162 (381)
T 1v2d_A 89 EALYVLL--QSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRL-DLTPEGFRLDLSALEKALTPR---TRALLLNTPM 162 (381)
T ss_dssp HHHHHHH--HHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEC-EEETTEEECCHHHHHTTCCTT---EEEEEEESSC
T ss_pred HHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeC-CCCCccCCcCHHHHHHhcCcC---CEEEEECCCC
Confidence 9998854 444789999999999999999999999999999998 5 345779999999887542 3477778999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|+++|+++|+||+|.+|.++. ...++..+ ...+++++.||||.+|++|+|+||++
T Consensus 163 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~---~~~~~~~~--~~~~~~~~~s~sK~~~~~G~r~G~~~-- 235 (381)
T 1v2d_A 163 NPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGE---RPRRLREF--APERTFTVGSAGKRLEATGYRVGWIV-- 235 (381)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS---CCCCHHHH--CTTTEEEEEEHHHHTTCGGGCCEEEE--
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCC---CCCCHHHh--cCCCEEEEeechhhcCCcccceEEEE--
Confidence 999999999999999999999999999999999998742 11122222 34589999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++ + ++.+.+.........+++.+.|.++...|+
T Consensus 236 ~~-~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 268 (381)
T 1v2d_A 236 GP-K----EFMPRLAGMRQWTSFSAPTPLQAGVAEALK 268 (381)
T ss_dssp CC-T----TTHHHHHHHHHHHTSSCCHHHHHHHHHHHH
T ss_pred eC-H----HHHHHHHHHHhhcccCCCcHHHHHHHHHHh
Confidence 65 3 344444444433445678888887777664
No 51
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=8.5e-32 Score=262.55 Aligned_cols=256 Identities=16% Similarity=0.221 Sum_probs=189.9
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhc-------C--CCCCCCCCCCCcHHHHHHHHHHHh---CCCCCCccC
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-------R--SRVKEYLPIVGLAEFNKLSAKLIL---GADSPAIRE 140 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-------~--~~~~~Y~p~~G~~~lr~aia~~~~---g~~~~~~~~ 140 (350)
...|+|+.+.+ +...+.++++....... . .....|++..|.++||+++++++. |... ++.+
T Consensus 36 ~~~i~l~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~-~~~~ 108 (428)
T 1iay_A 36 NGVIQMGLAEN------QLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRV-RFDP 108 (428)
T ss_dssp TSBEECSSCCC------CSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCS-CCCT
T ss_pred Cceeeeccccc------hhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCC-CCCh
Confidence 35789987765 23345666665532100 0 012459888899999999999953 3321 1337
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCCeEEEEEeecCCCCCCCHHHHHHHhhc---
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGLSVKSYRYYDPATRGLNFQGLLEDLGS--- 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~--- 216 (350)
++|++ |+|+++++.++ +.+.+.+||.|++++|+|..|...+. ..|++++.+|+..++++++|++.+++.++.
T Consensus 109 ~~i~~--~~G~~~ai~~~--~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 184 (428)
T 1iay_A 109 ERVVM--AGGATGANETI--IFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQK 184 (428)
T ss_dssp TSCEE--EEHHHHHHHHH--HHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHH
T ss_pred hhEEE--ccChHHHHHHH--HHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHh
Confidence 89999 99999999884 34557899999999999999987554 789999999983224578999999998864
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-------CCcEEE
Q 018820 217 APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-------GGECFI 289 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-------~~~vi~ 289 (350)
...+..++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ....+...+... .+++++
T Consensus 185 ~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~viv 262 (428)
T 1iay_A 185 SNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDT--PQFVSIAEILDEQEMTYCNKDLVHI 262 (428)
T ss_dssp TTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSS--SCCCCHHHHHTSGGGTTSCTTSEEE
T ss_pred cCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCC--CCccCHHHhccccccccCCCCcEEE
Confidence 12234577889999999999999999999999999999999999999987753 111223333322 468999
Q ss_pred EeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+.||||.||++|+|+||++ +++++ +++.+..... +.+++.++|.++..+|++
T Consensus 263 ~~s~sK~~g~~Glr~G~~~--~~~~~----~~~~~~~~~~--~~~~~~~~~~a~~~~l~~ 314 (428)
T 1iay_A 263 VYSLSKDMGLPGFRVGIIY--SFNDD----VVNCARKMSS--FGLVSTQTQYFLAAMLSD 314 (428)
T ss_dssp EEESTTTSSCGGGCEEEEE--ESCHH----HHHHHHHHHT--TSCCCHHHHHHHHHHTTC
T ss_pred EecchhhcCCCCceEEEEE--eCCHH----HHHHHHHHHh--cccCCHHHHHHHHHHhcC
Confidence 9999999999999999988 86654 4444444332 246788999999888875
No 52
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=9.8e-32 Score=254.92 Aligned_cols=245 Identities=15% Similarity=0.194 Sum_probs=193.3
Q ss_pred CCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 70 DPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 70 ~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
..+++.|+|+.|.+ +. .+.+.+.++...... . ...| |..|.++||+++++++ +. .+++|++ |+
T Consensus 13 ~~~~~~i~l~~~~~-~~----~~~~~v~~a~~~~~~--~-~~~y-~~~~~~~l~~~la~~~-~~-----~~~~i~~--~~ 75 (354)
T 3ly1_A 13 PSTDNPIRINFNEN-PL----GMSPKAQAAARDAVV--K-ANRY-AKNEILMLGNKLAAHH-QV-----EAPSILL--TA 75 (354)
T ss_dssp CCSSSCEECSSCCC-SS----CCCHHHHHHHHHTGG--G-TTSC-CHHHHHHHHHHHHHHT-TS-----CGGGEEE--ES
T ss_pred CCCCceEEccCCCC-CC----CCCHHHHHHHHHHHh--h-CcCC-CCCchHHHHHHHHHHh-CC-----ChHHEEE--eC
Confidence 35678999999987 32 234566666555441 1 3557 5678899999999985 42 2679999 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
|+++++.++. ..+..+||+|++++|+|..+...++..|++++.+|. ++ ++++|++.+++.+++.+ +..++++++|
T Consensus 76 g~~~a~~~~~--~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~-~~~~d~~~l~~~l~~~~-~~~~v~l~~p 150 (354)
T 3ly1_A 76 GSSEGIRAAI--EAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKM-LD-NWAFDIEGLKAAVAAYS-GPSIVYLVNP 150 (354)
T ss_dssp HHHHHHHHHH--HHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECC-CT-TSCCCHHHHHHHHHTCS-SCEEEEEESS
T ss_pred ChHHHHHHHH--HHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecC-CC-CCCCCHHHHHHHhccCC-CCCEEEEeCC
Confidence 9999998844 445789999999999999999999999999999998 53 47899999999997422 2337777899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcC-CcEEEEeccccccCccCcceeEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADG-GECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
|||||.+++.+++++|+++| ++|+++|+||+|.+|.+++ .. .......... ++++++.||||.+|++|+|+||++
T Consensus 151 ~nptG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~--~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 226 (354)
T 3ly1_A 151 NNPTGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDP--RF-RSISPMITQGAENIILLKTFSKIHAMAGMRVGYAV 226 (354)
T ss_dssp CTTTCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCT--TC-CCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEE
T ss_pred CCCcCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhcccc--cc-CCHHHHhhhcCCCEEEEeeChhhccChhhhheeee
Confidence 99999999999999999999 8999999999999988764 11 1222222333 689999999999999999999988
Q ss_pred EeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 309 IVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +.+.+++...... .+++.++|.++...|++
T Consensus 227 --~~-----~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~ 258 (354)
T 3ly1_A 227 --AH-----PTVIALMGRYVAG--EKINFSGVDAALASMND 258 (354)
T ss_dssp --CC-----HHHHHHHGGGTTC--SCCCHHHHHHHHHHTTC
T ss_pred --cC-----HHHHHHHHHhcCC--CCCCHHHHHHHHHHhcC
Confidence 76 5677777766554 57888999998888764
No 53
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5.1e-32 Score=262.78 Aligned_cols=268 Identities=16% Similarity=0.160 Sum_probs=198.2
Q ss_pred CCCCCCCccccchHhhcc--CCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 018820 52 VVRAPEDPILGVTVAYNK--DPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL 129 (350)
Q Consensus 52 v~~~~~~~i~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~ 129 (350)
+...+++++..+...+.+ ..+++.|+|+.|.+ +.. ..+.+.++. .... . ....|.+..|..+||++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~-~~~----~~~~v~~a~-~~l~-~-~~~~y~~~~g~~~l~~~la~~ 91 (409)
T 2gb3_A 20 VLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQP-DLK----TPEVFFERI-YENK-P-EVVYYSHSAGIWELREAFASY 91 (409)
T ss_dssp HHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCC-CSC----CCTHHHHHH-HHTC-C-SSCCCCCTTCCHHHHHHHHHH
T ss_pred hhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCC-CCC----CCHHHHHHH-HHHh-c-CCCCCCCCCCcHHHHHHHHHH
Confidence 444555566665554322 13567999999998 322 134455555 4331 2 234698888999999999999
Q ss_pred HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-CCCCCCHH
Q 018820 130 ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP-ATRGLNFQ 208 (350)
Q Consensus 130 ~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~ 208 (350)
+.......+.+++|++ |+|+++|+.++. .+.+.+||+|++++|+|..+...++..|++++.+|+ ++ +++.+ ++
T Consensus 92 ~~~~~g~~~~~~~v~~--~~g~t~a~~~~~--~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~~-~~ 165 (409)
T 2gb3_A 92 YKRRQRVDVKPENVLV--TNGGSEAILFSF--AVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTR-RMEEGFAI-PQ 165 (409)
T ss_dssp HHHTSCCCCCGGGEEE--ESHHHHHHHHHH--HHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEEC-CGGGTSCC-CT
T ss_pred HHHHhCCCCCHHHEEE--eCCHHHHHHHHH--HHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEecc-CCCCCCcc-HH
Confidence 6432111233689999 999999999854 445789999999999999999999999999999998 43 34444 77
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 209 GLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 209 ~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
.+++.+++ +..++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++ +. .+. +.....+++
T Consensus 166 ~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~--~~-~~~--~~~~~~~~i 237 (409)
T 2gb3_A 166 NLESFINE---RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG--EF-ASA--LSIESDKVV 237 (409)
T ss_dssp TGGGGCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS--CC-CCG--GGSCCTTEE
T ss_pred HHHHhhCc---CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCC--CC-CCc--cccCCCCEE
Confidence 88777754 34477788999999999999999999999999999999999999988753 11 111 222235799
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++.||||.+|++|+|+||++ ++++ ++.+++........ +++.+.|.++..+|+
T Consensus 238 ~~~s~sK~~g~~G~r~G~~~--~~~~----~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~ 290 (409)
T 2gb3_A 238 VIDSVSKKFSACGARVGCLI--TRNE----ELISHAMKLAQGRL-APPLLEQIGSVGLLN 290 (409)
T ss_dssp EEEESTTTTTCGGGCCEEEE--CSCH----HHHHHHHHHHHHSC-CCCHHHHHHHHHHHT
T ss_pred EEecchhccCCccceEEEEE--ECcH----HHHHHHHHHHhccC-CCCHHHHHHHHHHHh
Confidence 99999999999999999988 7743 44555555544444 788899988888875
No 54
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.8e-32 Score=266.72 Aligned_cols=264 Identities=15% Similarity=0.163 Sum_probs=194.6
Q ss_pred ccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHH--HHhhcCCCCCCC-CCCCCcHHHHHHHHHHHhCCCCCC
Q 018820 61 LGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQ--QLVNDRSRVKEY-LPIVGLAEFNKLSAKLILGADSPA 137 (350)
Q Consensus 61 ~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~--~l~~~~~~~~~Y-~p~~G~~~lr~aia~~~~g~~~~~ 137 (350)
+....++.. .+++|||+.|.| +...-|. .+.+.++.. ....+......| .+..|.++||+++++++ +.
T Consensus 15 ~~~~~~~~~--~~~~i~l~~g~p-~~~~~~~-~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~-~~---- 85 (423)
T 3ez1_A 15 RQAYEAFKA--RGLNLNMQRGQP-ADADFDL-SNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL-DV---- 85 (423)
T ss_dssp HHHHHHHHH--HTCCEESCCCCC-CHHHHHT-TGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT-TS----
T ss_pred HHHHHHhhc--CCceEecCCCCC-ChHhCCC-cHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh-CC----
Confidence 333344443 457899999999 4110011 223344432 322122224679 88999999999999995 32
Q ss_pred ccCCcEEEEecCCchhHHH--HHHHHHHHhc--C---------CCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCC
Q 018820 138 IRENRVTTVQCLSGTGSLR--VGAEFLARHY--H---------QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 138 ~~~~~v~~~~t~G~~~al~--l~~~l~~~~~--~---------gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
.+++|++ |+|+++++. ++ +.+++. + ||+|++++|+|..|...++..|++++.+|+ +++ +
T Consensus 86 -~~~~i~~--t~G~~~al~~~~~--~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~-~~~--g 157 (423)
T 3ez1_A 86 -KAENVLV--WNNSSLELQGLVL--TFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDM-QSD--G 157 (423)
T ss_dssp -CGGGEEE--CSSCHHHHHHHHH--HHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEE-ETT--E
T ss_pred -ChhhEEE--eCCcHHHHHHHHH--HHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccC-CCC--C
Confidence 2679999 999999997 53 334455 6 599999999999999999999999999999 543 5
Q ss_pred CCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHH-HhcCcEEEEccCCCCCCCCC-CCCchHHHHHH--
Q 018820 205 LNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLM-RSKGLLPFFDSAYQGFASGS-LDSDAQSVRMF-- 280 (350)
Q Consensus 205 ~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~-~~~~~~ii~DeaY~~~~~~~-~~~~~~~~~~~-- 280 (350)
+|++.+++.+++.++.++++++++||||||.+++.+++++|+++| ++||+++|+||+|..+.+.+ ......+...+
T Consensus 158 ~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 237 (423)
T 3ez1_A 158 PDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLAR 237 (423)
T ss_dssp ECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHH
T ss_pred CCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhh
Confidence 999999999963333344446789999999999999999999999 99999999999999755432 10111122222
Q ss_pred -hhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 281 -VADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 281 -~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
....+++|+++||||. +++|+|+||++ ++ +++++++.........+++.+.|.++..+|++
T Consensus 238 ~~~~~~~~i~~~S~sK~-~~~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 238 DAGYPDRAFVFASTSKI-TFAGAGLGFVA--SS-----EDNIRWLSKYLGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp HHTCTTSEEEEEESTTT-SCSSSSCEEEE--EC-----HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEeCchhh-ccCCcceEEEE--eC-----HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHh
Confidence 1244689999999998 57999999988 77 56777777777777778999999998888764
No 55
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=5.9e-32 Score=260.96 Aligned_cols=250 Identities=19% Similarity=0.243 Sum_probs=192.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.++.|||+.|.+ +..+ .+.+.+.++....... ......|.+..|..+||+++++++ |. .+++|++ |+|
T Consensus 31 ~~~~i~l~~g~~-~~~~--~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~-g~-----~~~~v~~--~~g 99 (397)
T 2zyj_A 31 RPGILSFAGGLP-APEL--FPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI-GV-----RPEEVLI--TTG 99 (397)
T ss_dssp STTCEEESSCCC-CGGG--CCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH-TS-----CGGGEEE--ESH
T ss_pred CCCceecCCCCC-Cchh--CCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh-CC-----ChhhEEE--ecc
Confidence 457899999987 4332 2345566555444311 111256888889999999999997 42 2679999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACA 229 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p 229 (350)
+++++.++. .++..+||+|++++|+|..+...++..|++++.+|. +++ ++|++.+++.+++ +++ +++++++|
T Consensus 100 ~~~al~~~~--~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~--~~d~~~l~~~l~~~~~~--~v~~~~~~ 172 (397)
T 2zyj_A 100 SQQALDLVG--KVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPA-GEE--GPDLDALEEVLKRERPR--FLYLIPSF 172 (397)
T ss_dssp HHHHHHHHH--HHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEE-ETT--EECHHHHHHHHHHCCCS--CEEECCBS
T ss_pred HHHHHHHHH--HHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCc-CCC--CCCHHHHHHHHhhcCCe--EEEECCCC
Confidence 999998843 445689999999999999999999999999999998 543 4899999999875 332 34468999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc--CCcEEEEeccccccCccCcceeEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD--GGECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~--~~~vi~~~S~SK~~gl~G~RvG~l 307 (350)
|||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ +...++..+... .++++++.||||.++ +|+|+||+
T Consensus 173 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~ 249 (397)
T 2zyj_A 173 QNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGE--ARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFA 249 (397)
T ss_dssp CTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSS--CCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEE
T ss_pred cCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCC--CCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEE
Confidence 9999999999999999999999999999999999998753 211233333222 157999999999999 99999998
Q ss_pred EEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 308 SIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 308 ~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ ++ +++.+++.........+++.++|.++..+|++
T Consensus 250 ~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 284 (397)
T 2zyj_A 250 V--AH-----PEALQKLVQAKQGADLHTPMLNQMLVHELLKE 284 (397)
T ss_dssp E--CC-----HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTT
T ss_pred e--cC-----HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHh
Confidence 8 76 45566665554444455688999988888864
No 56
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.98 E-value=9.4e-32 Score=256.97 Aligned_cols=255 Identities=12% Similarity=0.125 Sum_probs=191.5
Q ss_pred CCCCccccchHhhcc--CCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh-
Q 018820 55 APEDPILGVTVAYNK--DPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL- 131 (350)
Q Consensus 55 ~~~~~i~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~- 131 (350)
.+++++..+.....+ ..+++.|+|+.|.+ +.. +.+.+.++...... .. ...|++..|.++||+++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~-~~-~~~y~~~~~~~~l~~~la~~~~~ 81 (370)
T 2z61_A 9 FESFEVMDILALAQKLESEGKKVIHLEIGEP-DFN----TPKPIVDEGIKSLK-EG-KTHYTDSRGILELREKISELYKD 81 (370)
T ss_dssp CCCCTTHHHHHHHHHHHHTTCCCEECCCCSC-SSC----CCHHHHHHHHHHHH-TT-CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCEEEccCCCC-CCC----CCHHHHHHHHHHHH-cC-ccCCCCCCCCHHHHHHHHHHHHH
Confidence 334455554443321 13567899999988 422 13555555544431 22 3569888899999999999963
Q ss_pred --CCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHH
Q 018820 132 --GADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQG 209 (350)
Q Consensus 132 --g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~ 209 (350)
|... .+++|++ |+|+++++.++. .+.+.+||+|++++|+|+.+...++..|++++.+| +|++.
T Consensus 82 ~~g~~~---~~~~v~~--~~g~~~a~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~ 146 (370)
T 2z61_A 82 KYKADI---IPDNIII--TGGSSLGLFFAL--SSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVES 146 (370)
T ss_dssp HSSCCC---CGGGEEE--ESSHHHHHHHHH--HHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHH
T ss_pred HhCCCC---ChhhEEE--CCChHHHHHHHH--HHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHH
Confidence 4333 3789999 999999998854 44478999999999999999999999999998876 58999
Q ss_pred HHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 210 LLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 210 l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
+++.++++ ..++++++||||||.+++.+ |+++|+++|+++|+||+|.++.+++ +. .++..+....+++++
T Consensus 147 l~~~l~~~---~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g--~~-~~~~~~~~~~~~~i~ 216 (370)
T 2z61_A 147 LEEALSDK---TKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEG--KC-YSAIEFDENLEKTIL 216 (370)
T ss_dssp HHHHCCSS---EEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSS--CC-CCGGGTCTTCSSEEE
T ss_pred HHHhcccC---ceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCC--CC-cCHHHccCCCCcEEE
Confidence 99988652 34677799999999999988 8999999999999999999998753 11 122222123357999
Q ss_pred EeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+.||||.+|++|+|+||++ ++ +++.+++.........+++.+.|.++..+|+
T Consensus 217 ~~s~sK~~~~~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 268 (370)
T 2z61_A 217 INGFSKLYAMTGWRIGYVI--SN-----DEIIEAILKLQQNLFISAPTISQYAALKAFE 268 (370)
T ss_dssp EEESTTTTTCGGGCCEEEE--CC-----HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGS
T ss_pred EecChhccCCccceEEEEE--EC-----HHHHHHHHHHHhhcccCCCHHHHHHHHHHHh
Confidence 9999999999999999988 77 4566666666555556788889988877764
No 57
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.98 E-value=2e-31 Score=254.05 Aligned_cols=241 Identities=14% Similarity=0.092 Sum_probs=188.6
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
++.|+|+.|.+ +.. +.+.+.++...... ....|++..+ .+||+++++++ |. .+++|++ |+|++
T Consensus 30 ~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~---~~~~y~~~~~-~~lr~~la~~~-~~-----~~~~v~~--~~g~~ 92 (365)
T 3get_A 30 KEVIKLASNEN-PFG----TPPKAIECLRQNAN---KAHLYPDDSM-IELKSTLAQKY-KV-----QNENIII--GAGSD 92 (365)
T ss_dssp SCCEECSSCCC-TTC----SCHHHHHHHHHHGG---GTTSCCCTTC-HHHHHHHHHHH-TC-----CGGGEEE--ESSHH
T ss_pred CceEEecCCCC-CCC----CCHHHHHHHHHHHH---hhccCCCCCh-HHHHHHHHHHh-CC-----CcceEEE--CCCHH
Confidence 67999999987 321 24556666555441 2356877766 89999999986 43 2679999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++.++ +..++.+||+|++++|+|..+...++..|++++.+|+ +++++ +|++.+++.++.+ ..++++++||||
T Consensus 93 ~a~~~~--~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~---~~~v~~~~p~np 165 (365)
T 3get_A 93 QVIEFA--IHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDE---IKLIFLCLPNNP 165 (365)
T ss_dssp HHHHHH--HHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTT---EEEEEEESSCTT
T ss_pred HHHHHH--HHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCC---CCEEEEcCCCCC
Confidence 999884 3445789999999999999999999999999999988 55567 9999999998743 347778999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCC--CCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFAS--GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~--~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||.+++.+++++|+++| ++|+++|+||+|.+|.+ .+ ....+........+++++++||||.+|++|+|+||++
T Consensus 166 tG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-- 240 (365)
T 3get_A 166 LGECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDS--KKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGI-- 240 (365)
T ss_dssp TCCCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCG--GGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEE--
T ss_pred CCCCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCC--cccccHhHHhccCCCEEEEeecchHhcCcchheEEEE--
Confidence 99999999999999999 57999999999998874 32 1111222223445689999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +++.+++...... .+++.++|.++..+|++
T Consensus 241 ~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~ 272 (365)
T 3get_A 241 AN-----ANIISAFYKLRAP--FNVSNLALKAAVAAMDD 272 (365)
T ss_dssp EC-----HHHHHHHHHHSCT--TCSCHHHHHHHHHHHTC
T ss_pred cC-----HHHHHHHHHhcCC--CCcCHHHHHHHHHHhCC
Confidence 75 4566666655543 35888999998888764
No 58
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.98 E-value=1.6e-31 Score=257.77 Aligned_cols=250 Identities=11% Similarity=0.069 Sum_probs=188.2
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEecC
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t~ 149 (350)
++.|+|+.|.+ +. .+.+.+.++....... ....|++. .++||+++++++ +|.+.. +++|++ |+
T Consensus 31 ~~~i~l~~~~~-~~----~~~~~v~~a~~~~~~~--~~~~y~~~--~~~l~~~la~~l~~~~g~~~~---~~~v~~--t~ 96 (399)
T 1c7n_A 31 NEVVPLSVADM-EF----KNPPELIEGLKKYLDE--TVLGYTGP--TEEYKKTVKKWMKDRHQWDIQ---TDWIIN--TA 96 (399)
T ss_dssp TTCCCCCSSSC-SS----CCCHHHHHHHHHHHHH--CCCSSBCC--CHHHHHHHHHHHHHHHCCCCC---GGGEEE--ES
T ss_pred CCceeeeecCC-CC----CCCHHHHHHHHHHHhc--CCCCCCCC--cHHHHHHHHHHHHHHhCCCCC---hhhEEE--cC
Confidence 47899999987 32 1245566655554422 23468654 899999999995 464333 688999 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-CCCCCHHHHHHHhhcCCCCcEEEEecC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-TRGLNFQGLLEDLGSAPAGAIVLLHAC 228 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~l~~~~ 228 (350)
|+++++.++. .++..+||+|++++|+|..+...++..|++++.+|+.+++ ++.+|++.+++.++.. +..++++++
T Consensus 97 g~~~a~~~~~--~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~--~~~~v~~~~ 172 (399)
T 1c7n_A 97 GVVPAVFNAV--REFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDK--NNKALLFCS 172 (399)
T ss_dssp SHHHHHHHHH--HHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCT--TEEEEEEES
T ss_pred CHHHHHHHHH--HHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccC--CCcEEEEcC
Confidence 9999998844 4556789999999999999999999999999999883233 3558999999998732 234677799
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-CCcEEEEeccccccCccCcceeEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-GGECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~RvG~l 307 (350)
||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ....++..+... .++++++.||||.+|++|+|+||+
T Consensus 173 ~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (399)
T 1c7n_A 173 PHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPG--YEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI 250 (399)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTT--CCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC--CCcccHHHcCccccCcEEEEEeChhhccccchheEEE
Confidence 99999999999999999999999999999999999998754 111222222111 357999999999999999999998
Q ss_pred EEeeCChhHHHHHHHHHHHhhccc-ccCCChhHHHHHHHHhc
Q 018820 308 SIVCKTADVAGRVESQVKLVIRPM-YSNPPIHGASIVAAILR 348 (350)
Q Consensus 308 ~~v~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~i~~~~L~ 348 (350)
+ +++++ +.+++....... +++++.++|.++..+|+
T Consensus 251 ~--~~~~~----~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~ 286 (399)
T 1c7n_A 251 I--IKNPD----IRERFTKSRDATSGMPFTTLGYKACEICYK 286 (399)
T ss_dssp E--CCCHH----HHHHHHHHHHHTTCCCCCHHHHHHHHHHHH
T ss_pred E--ECCHH----HHHHHHHHHhhcccCCCCHHHHHHHHHHHh
Confidence 8 87654 444444443332 34678888888777764
No 59
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.98 E-value=2.6e-31 Score=254.17 Aligned_cols=251 Identities=9% Similarity=0.109 Sum_probs=189.3
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEec
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQC 148 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t 148 (350)
+++.|+|+.|.+ +.. +.+.+.++...... .. ...|++. ..++|+++++++ +|... .+++|++ |
T Consensus 23 ~~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~-~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~---~~~~v~~--~ 88 (383)
T 3kax_A 23 NEELIHAWIADM-DFE----VPQPIQTALKKRIE-HP-IFGYTLP--PENIGDIICNWTKKQYNWDI---QKEWIVF--S 88 (383)
T ss_dssp SSCCEECCCSSC-SSC----CCHHHHHHHHHHHH-SC-CCCCCCC--CTTHHHHHHHHHHHHHCCCC---CGGGEEE--E
T ss_pred CCCeeecccccC-CCC----CCHHHHHHHHHHHh-cC-CCCCCCC--CHHHHHHHHHHHHHHhCCCC---ChhhEEE--c
Confidence 468999999987 322 24555555544431 22 3557655 678999999985 45332 3789999 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-CCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-TRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
+|+++++.++ +..++.+||+|+++.|+|..+...++..|++++.+++...+ ++.+|++.+++.+..+++ +++++
T Consensus 89 ~g~~~a~~~~--~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~v~i~ 163 (383)
T 3kax_A 89 AGIVPALSTS--IQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVK---LMLLC 163 (383)
T ss_dssp SCHHHHHHHH--HHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCC---EEEEE
T ss_pred CCHHHHHHHH--HHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCe---EEEEe
Confidence 9999999884 34457899999999999999999999999999999983222 356899999999954443 66779
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-CCcEEEEeccccccCccCcceeE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-GGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
+||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ +...++..+..+ .++++++.||||.+|++|+|+||
T Consensus 164 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 241 (383)
T 3kax_A 164 SPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYAD--HTHTPFASLSEELAARTITCMAPSKTFNIAGLQASI 241 (383)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--CCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEE
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCceeHhhcCccccCcEEEEEEChhhccCcchhheE
Confidence 999999999999999999999999999999999999998864 211222222211 36899999999999999999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhhcc-cccCCChhHHHHHHHHhcC
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRP-MYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +++++ +.+++...... .+.+++.+++.++...|++
T Consensus 242 ~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 279 (383)
T 3kax_A 242 II--IPNEK----LRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE 279 (383)
T ss_dssp EE--CCCHH----HHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT
T ss_pred EE--eCCHH----HHHHHHHHHhhcccCCCCHHHHHHHHHHHHh
Confidence 88 76654 44444444332 3457888888888877764
No 60
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.98 E-value=1.1e-31 Score=259.62 Aligned_cols=250 Identities=18% Similarity=0.150 Sum_probs=178.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhh---cCCCCCCCCCCCCcHHHHHHHHHHHh-CCCCCCccCCcEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVN---DRSRVKEYLPIVGLAEFNKLSAKLIL-GADSPAIRENRVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~---~~~~~~~Y~p~~G~~~lr~aia~~~~-g~~~~~~~~~~v~~~ 146 (350)
.+++.|+|+.|.+ +... .+.+.++...... .......|++..|.++||++++++++ |. . .+++|++
T Consensus 31 ~~~~~i~l~~~~~-~~~~----~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~-~---~~~~v~~- 100 (400)
T 3asa_A 31 PQHTVINLSIGDT-TQPL----NASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGF-V---DAKEIFI- 100 (400)
T ss_dssp TTSCCEECSSCCC-CCCC----CHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTS-S---CGGGEEE-
T ss_pred CCCceEeccCCCC-CCCC----CHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCC-C---CHHHEEE-
Confidence 4567999999987 4322 3344444333221 11124569888899999999999963 42 2 2789999
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCe-EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLS-VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~-~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
|+|+++++.++. ..+.+||+|++++|+|..+...++..|++ ++.+|+.+.+++..|++. + .++ .+++
T Consensus 101 -~~G~~~al~~~~---~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~----~-~~~---~~v~ 168 (400)
T 3asa_A 101 -SDGAKVDLFRLL---SFFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE----D-THI---DILC 168 (400)
T ss_dssp -ESCHHHHHHHHH---HHHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT----T-CCC---SEEE
T ss_pred -ccChHHHHHHHH---HHcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh----c-cCc---cEEE
Confidence 999999998743 34578999999999999999999999999 999998322234444322 1 222 2666
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCccee
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG 305 (350)
+++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ....++..+....+++|++.||||.||++|+|+|
T Consensus 169 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG 246 (400)
T 3asa_A 169 LCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDP--SLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLG 246 (400)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCT--TSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCE
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCC--CCCCchhhCCCCCCceEEEecchhhcCCcchhee
Confidence 67999999999999999999999999999999999999988753 1111222221113479999999999999999999
Q ss_pred EEEEeeCChhH------HHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 306 ALSIVCKTADV------AGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 306 ~l~~v~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
|++ ++++-. +..+.. ......+.+++.++|.++..+|++
T Consensus 247 ~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l~~ 291 (400)
T 3asa_A 247 WTV--IPQELTYADGHFVIQDWE---RFLSTTFNGASIPAQEAGVAGLSI 291 (400)
T ss_dssp EEE--CCTTCBCTTSCBHHHHHH---HHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred EEe--eChhhccchhhhHHHHHH---HHhccCccCCChHHHHHHHHHhCc
Confidence 987 763210 222322 122333557889999888887753
No 61
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.97 E-value=6.4e-31 Score=252.14 Aligned_cols=249 Identities=7% Similarity=0.030 Sum_probs=188.5
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEec
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQC 148 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t 148 (350)
+.+.|+|+.|.+ +. .+.+.+.++..... ....+.|.+ |..++++++++++ +|... .+++|++ |
T Consensus 31 ~~~~i~l~~~~~-~~----~~~~~v~~a~~~~~--~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~---~~~~v~~--~ 96 (391)
T 4dq6_A 31 TNDLLPMWVADM-DF----KAAPCIIDSLKNRL--EQEIYGYTT--RPDSYNESIVNWLYRRHNWKI---KSEWLIY--S 96 (391)
T ss_dssp CSCSEECCSSSC-SS----CCCHHHHHHHHHHH--TTCCCCCBC--CCHHHHHHHHHHHHHHHCCCC---CGGGEEE--E
T ss_pred CCCceeccccCC-CC----CCCHHHHHHHHHHH--hCCCCCCCC--CCHHHHHHHHHHHHHHhCCCC---cHHHeEE--c
Confidence 467999999987 32 22455556555544 122345654 6799999999984 45332 3789999 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee--cCCCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY--DPATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~--~~~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
+|+++++.++ +.+.+.+||+|+++.|+|..+...++..|++++.+|+. ++.++.+|++.+++.+++ ..++++
T Consensus 97 ~g~~~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~v~i 170 (391)
T 4dq6_A 97 PGVIPAISLL--INELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD----VKLFIL 170 (391)
T ss_dssp SCHHHHHHHH--HHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT----EEEEEE
T ss_pred CChHHHHHHH--HHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc----CCEEEE
Confidence 9999999884 34557899999999999999999999999999999983 233466899999999876 347788
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-CCcEEEEeccccccCccCccee
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-GGECFIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~RvG 305 (350)
++||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ +...++..+..+ .++++++.||||.+|++|+|+|
T Consensus 171 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 248 (391)
T 4dq6_A 171 CNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKK--HKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSS 248 (391)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTT--CCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCE
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCC--CCccCHHHcCccccCcEEEEEechhhccCcccceE
Confidence 9999999999999999999999999999999999999998864 221222222211 2579999999999999999999
Q ss_pred EEEEeeCChhHHHHHHHHHHHhhc-ccccCCChhHHHHHHHHhc
Q 018820 306 ALSIVCKTADVAGRVESQVKLVIR-PMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 306 ~l~~v~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~i~~~~L~ 348 (350)
|++ +++++ +.+.+..... ..+.+++.+++.++...|.
T Consensus 249 ~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 286 (391)
T 4dq6_A 249 YVV--LPDEK----DYKLLDDAFTRIDIKRNNCFSLVATEASYN 286 (391)
T ss_dssp EEE--CCSHH----HHHHHHHHHHHTTCCCCCHHHHHHHHHHHH
T ss_pred EEE--eCCHH----HHHHHHHHHHhhcCCCCCHHHHHHHHHHHh
Confidence 988 77544 3444444322 2345678888887776664
No 62
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.97 E-value=3.3e-31 Score=252.75 Aligned_cols=230 Identities=20% Similarity=0.205 Sum_probs=179.2
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.+.|+|+.|++ +. ++|.. + .+ . ....|++. +.++||+++|+++ +.+ +++|++ |+|++
T Consensus 29 ~~~i~l~~~~~-~~-~~~~~---v-----a~---~-~~~~Y~~~-~~~~lr~~la~~~-~~~-----~~~v~~--~~G~~ 85 (356)
T 1fg7_A 29 NGDVWLNANEY-PT-AVEFQ---L-----TQ---Q-TLNRYPEC-QPKAVIENYAQYA-GVK-----PEQVLV--SRGAD 85 (356)
T ss_dssp TCSEECSSCCC-SS-CCCCC---C-----CC---C-CTTSCCCS-SCHHHHHHHHHHH-TSC-----GGGEEE--ESHHH
T ss_pred CceEEeeCCCC-CC-CCCHh---H-----hh---h-hhccCCCc-cHHHHHHHHHHHh-CCC-----hHHEEE--cCCHH
Confidence 36899999987 32 22211 2 11 1 23568665 5899999999996 432 678999 99999
Q ss_pred hHHHHHHHHHHHhcCC-CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 153 GSLRVGAEFLARHYHQ-RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 153 ~al~l~~~l~~~~~~g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
+++.++ +.+.+.+| |+|++++|+|..|...++..|++++.+|+ + +++++|++.+++.+. +..++++++|||
T Consensus 86 ~ai~~~--~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~----~~~~v~l~~p~n 157 (356)
T 1fg7_A 86 EGIELL--IRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPT-L-DNWQLDLQGISDKLD----GVKVVYVCSPNN 157 (356)
T ss_dssp HHHHHH--HHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCC-C-TTSCCCHHHHHTSCT----TEEEEEEESSCT
T ss_pred HHHHHH--HHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeC-C-CCCCCCHHHHHHHhc----CCCEEEEeCCCC
Confidence 999884 44556799 99999999999999999999999999988 4 347899999988775 234777789999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+++|+ +|+++|+||+|.+|..+ .+...+....++++++.||||.||++|+|+||++ +
T Consensus 158 ptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~------~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~--~ 228 (356)
T 1fg7_A 158 PTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ------ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL--A 228 (356)
T ss_dssp TTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG------GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEE--E
T ss_pred CCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC------CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEE--e
Confidence 9999999999999999999 99999999999988721 1112222334589999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++++++..... .| +++.++|.++..+|++
T Consensus 229 ~-----~~~~~~l~~~~~-~~-~~~~~~~~a~~~~l~~ 259 (356)
T 1fg7_A 229 N-----EEVINLLMKVIA-PY-PLSTPVADIAAQALSP 259 (356)
T ss_dssp C-----HHHHHHHHHHSC-SS-CSCHHHHHHHHHHTSH
T ss_pred C-----HHHHHHHHHhcC-CC-CCCHHHHHHHHHHhcC
Confidence 5 456666665543 33 6888999888888753
No 63
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.97 E-value=6.2e-31 Score=251.52 Aligned_cols=213 Identities=15% Similarity=0.158 Sum_probs=177.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcC
Q 018820 110 VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAG 189 (350)
Q Consensus 110 ~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G 189 (350)
...|.+..|.++||+++++++.+. .+++|++ |+|+++|+.++ +.+++.+||+|++++|+|..+...++..|
T Consensus 56 ~~~y~~~~g~~~l~~~la~~~~~~-----~~~~v~~--~~g~~~a~~~~--~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g 126 (375)
T 3op7_A 56 KLNYGWIEGSPAFKKSVSQLYTGV-----KPEQILQ--TNGATGANLLV--LYSLIEPGDHVISLYPTYQQLYDIPKSLG 126 (375)
T ss_dssp CCSSCCTTCCHHHHHHHHTTSSSC-----CGGGEEE--ESHHHHHHHHH--HHHHCCTTCEEEEEESSCTHHHHHHHHTT
T ss_pred CcCCCCCCChHHHHHHHHHHhccC-----ChhhEEE--cCChHHHHHHH--HHHhcCCCCEEEEeCCCchhHHHHHHHcC
Confidence 357999999999999999985322 2689999 99999999884 44557899999999999999999999999
Q ss_pred CeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCC
Q 018820 190 LSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGS 269 (350)
Q Consensus 190 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~ 269 (350)
++++.+++..++++.+|++.+++.++.+++ ++++++||||||.+++.+++++|+++|++||+++|+||+|.+|.++.
T Consensus 127 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~ 203 (375)
T 3op7_A 127 AEVDLWQIEEENGWLPDLEKLRQLIRPTTK---MICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELD 203 (375)
T ss_dssp CEEEEEEEEGGGTTEECHHHHHHHCCTTCC---EEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSC
T ss_pred CEEEEEeccccCCCCCCHHHHHHhhccCCe---EEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccC
Confidence 999999984355677899999999975444 67788999999999999999999999999999999999999998752
Q ss_pred CCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 270 LDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
. ... ....++++++.||||.+|++|+|+||++ ++ +++.+++.........+++.+.|.++...|+
T Consensus 204 ~----~~~---~~~~~~~i~~~s~sK~~~~~G~r~G~v~--~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (375)
T 3op7_A 204 V----PSI---IEVYDKGIAVNSLSKTYSLPGIRIGWVA--AN-----HQVTDILRDYRDYTMICAGVFDDLVAQLALA 268 (375)
T ss_dssp C----CCH---HHHCTTEEEEEESSSSSSCGGGCCEEEE--CC-----HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred C----Cch---hhhcCCEEEEeEChhhcCCcccceEEEE--eC-----HHHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence 1 111 2234678999999999999999999988 75 5677777776666666778888888777665
No 64
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.97 E-value=1e-30 Score=250.67 Aligned_cols=251 Identities=14% Similarity=0.119 Sum_probs=188.1
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEec
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQC 148 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t 148 (350)
+.+.|||++|.+ +.. +.+.+.++..... ....+.|.+. ..++|+++++++ +|.+. .+++|++ |
T Consensus 26 g~~~i~~~~~~~-~~~----~~~~v~~a~~~~~--~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~---~~~~i~~--~ 91 (391)
T 3dzz_A 26 KEKELPMWIAEM-DFK----IAPEIMASMEEKL--KVAAFGYESV--PAEYYKAVADWEEIEHRARP---KEDWCVF--A 91 (391)
T ss_dssp CTTCEECCSSCC-SSC----CCHHHHHHHHHHH--TTCCCCCBCC--CHHHHHHHHHHHHHHHSCCC---CGGGEEE--E
T ss_pred CCCceeccccCC-CCC----CCHHHHHHHHHHH--hcCcCCCCCC--CHHHHHHHHHHHHHHhCCCC---CHHHEEE--C
Confidence 457999999987 432 2455555555544 1223567665 689999999994 45333 3789999 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee-cCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY-DPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
+|+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+|+. +..++.+|++.+++.++.. +..+++++
T Consensus 92 ~g~~~a~~~~--~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~i~ 167 (391)
T 3dzz_A 92 SGVVPAISAM--VRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATP--SVRMMVFC 167 (391)
T ss_dssp SCHHHHHHHH--HHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTST--TEEEEEEE
T ss_pred CCHHHHHHHH--HHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhcc--CceEEEEE
Confidence 9999999884 44557899999999999999999999999999999983 2333569999999999732 23477789
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-CCcEEEEeccccccCccCcceeE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-GGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
+||||||.+++.+++++|+++|++||+++|+||+|.+|.+++ ....+...+... .++++++.||||.+|++|+|+||
T Consensus 168 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~ 245 (391)
T 3dzz_A 168 NPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTD--EDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAAC 245 (391)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS--CCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEE
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCC--CCceehhhcCccccCcEEEEEeChhhccccchhheE
Confidence 999999999999999999999999999999999999998764 221223222211 35899999999999999999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhhc-ccccCCChhHHHHHHHHhc
Q 018820 307 LSIVCKTADVAGRVESQVKLVIR-PMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~i~~~~L~ 348 (350)
++ +++++..+.+ ..... ....+++.+++.++...|.
T Consensus 246 ~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~~l~ 282 (391)
T 3dzz_A 246 AI--IPNPDLRARA----EESFFLAGIGEPNLLAIPAAIAAYE 282 (391)
T ss_dssp EE--CCSHHHHHHH----HHHHHHHTCSSCCTTHHHHHHHHHH
T ss_pred EE--ECCHHHHHHH----HHHHHhhccCCCCHHHHHHHHHHHh
Confidence 88 7766544444 33322 2334677777777766654
No 65
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.97 E-value=3.7e-32 Score=266.13 Aligned_cols=268 Identities=17% Similarity=0.145 Sum_probs=196.8
Q ss_pred CccccchHhhcc-CCCCCeE-EeecccccCCCCCccccHHHHHHHHHHhhc-------CC---CCCCCCCCCCcHHHHHH
Q 018820 58 DPILGVTVAYNK-DPSPVKL-NLGVGAYRTEEGKPLVLNVVRKAEQQLVND-------RS---RVKEYLPIVGLAEFNKL 125 (350)
Q Consensus 58 ~~i~~~~~~~~~-~~~~~~i-~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-------~~---~~~~Y~p~~G~~~lr~a 125 (350)
++|..+...+.+ ...+++| +|+.|.| +. +|.+.+.++++...+..+ +. ....|.+..|.++||++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~~l~~g~p-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ 91 (444)
T 3if2_A 15 TGISQLMDDLGDALKSDQPVNMLGGGNP-AK--IDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDA 91 (444)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEECSCCCC-CC--CHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHH
T ss_pred hhHHHHHHHHHhhhcCchhhhccCCCCC-Cc--ccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHH
Confidence 355555543321 1347899 9999998 33 245557777777766522 10 12569999999999999
Q ss_pred HHHHH---hCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCC--------------EEEEc-CCCCCChHH----
Q 018820 126 SAKLI---LGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQR--------------TIYIP-QPTWGNHPK---- 183 (350)
Q Consensus 126 ia~~~---~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd--------------~Vlv~-~P~y~~~~~---- 183 (350)
+|+++ +|... .+++|++ |+|+++++.++ +..++.+|| .|+++ +|+|..|..
T Consensus 92 ia~~l~~~~g~~~---~~~~i~~--t~G~t~al~~~--~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~ 164 (444)
T 3if2_A 92 LVGFFNRHYDWNL---TSENIAL--TNGSQNAFFYL--FNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE 164 (444)
T ss_dssp HHHHHHHHHCCCC---CGGGEEE--ESSHHHHHHHH--HHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS
T ss_pred HHHHHHhhcCCCC---CHHHEEE--ecCcHHHHHHH--HHHHhCCCccccccccccccccceEEEeCCCCccchhhcccc
Confidence 99996 44443 3789999 99999999984 444567887 78776 999999987
Q ss_pred --HHHHcCCeEEEEEeecCC----CCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 184 --VFTLAGLSVKSYRYYDPA----TRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 184 --~~~~~G~~~~~v~~~~~~----~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
.+...|.+++.++. +++ ++++|++.+++.++...++..++++++||||||.+++.+++++|+++|++||+++|
T Consensus 165 ~~~~~~~~~~~~~~~~-~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li 243 (444)
T 3if2_A 165 GQHFAAVLPHIDEVTH-DGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLI 243 (444)
T ss_dssp SCCEEECCCEEEEEEE-TTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEE
T ss_pred cchhhccCceEEeccc-ccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEE
Confidence 34567888888887 432 25789999998743212335578889999999999999999999999999999999
Q ss_pred EccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCCh
Q 018820 258 FDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPI 337 (350)
Q Consensus 258 ~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 337 (350)
+||+|..+..+....+.. ....++++++.||||. +++|+|+||++ ++ +++.+++.........+++.
T Consensus 244 ~De~~~~~~~~~~~~~~~-----~~~~~~~i~~~S~sK~-~~~G~r~G~~~--~~-----~~l~~~~~~~~~~~~~~~~~ 310 (444)
T 3if2_A 244 IDNAYGMPFPNIIYSDAH-----LNWDNNTILCFSLSKI-GLPGMRTGIIV--AD-----AKVIEAVSAMNAVVNLAPTR 310 (444)
T ss_dssp EECTTCTTTTCCBCSCCC-----CCCCTTEEEEEESTTT-TCGGGCCEEEE--CC-----HHHHHHHHHHHHHHHSSCCC
T ss_pred EECCCCCccccccccccc-----ccCCCCEEEEechhhc-cCCCCceEEEE--EC-----HHHHHHHHHHHHhccCCCCh
Confidence 999998644221000000 1123589999999996 78999999987 76 56777777666666667888
Q ss_pred hHHHHHHHHhcC
Q 018820 338 HGASIVAAILRD 349 (350)
Q Consensus 338 ~~q~i~~~~L~~ 349 (350)
++|.++..++++
T Consensus 311 ~~~~a~~~~l~~ 322 (444)
T 3if2_A 311 FGAAIATPLVAN 322 (444)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 999988888764
No 66
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.97 E-value=3.9e-30 Score=245.27 Aligned_cols=245 Identities=18% Similarity=0.153 Sum_probs=190.1
Q ss_pred hccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 67 YNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 67 ~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
|..+..++.|+|+.|.+ +.. +.+.+.++....... .....|++ .|..+||+++++++ |.. .+++|++
T Consensus 24 ~~~~~~~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~~-~~~~~y~~-~~~~~l~~~la~~~-g~~----~~~~i~~- 90 (367)
T 3euc_A 24 YHVPDSHGLVKLDAMEN-PYR----LPPALRSELAARLGE-VALNRYPV-PSSEALRAKLKEVM-QVP----AGMEVLL- 90 (367)
T ss_dssp SSCCCCTTCEECCSSCC-CCC----CCHHHHHHHHHHHHH-HHTTCSCC-CCHHHHHHHHHHHH-TCC----TTCEEEE-
T ss_pred CCCCCCCCeeEccCCCC-CCC----CCHHHHHHHHHHhhh-hhhhcCCC-CcHHHHHHHHHHHh-CCC----CcceEEE-
Confidence 33334567999999987 322 234444444443311 12356855 58999999999996 431 2679999
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEE
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLL 225 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~ 225 (350)
|+|+++++.++ +...+.+||+|+++.|+|..+...++..|++++.+|+ ++ ++.+|++.+++.+++ +++ +++
T Consensus 91 -~~g~t~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~~~~~---~v~ 162 (367)
T 3euc_A 91 -GNGSDEIISML--ALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPL-RA-DFTLDRGAMLAAMAEHQPA---IVY 162 (367)
T ss_dssp -EEHHHHHHHHH--HHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEEC-CT-TSCCCHHHHHHHHHHHCCS---EEE
T ss_pred -cCCHHHHHHHH--HHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecC-CC-CCCCCHHHHHHHhhccCCC---EEE
Confidence 99999999884 4455789999999999999999999999999999998 54 578999999999987 554 677
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhc--CcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcc
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSK--GLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGER 303 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R 303 (350)
+++||||||.+++.+++++|+++|++| |+++|+||+|.+|...+ . .. .....++++++.||||. +++|+|
T Consensus 163 ~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~---~---~~-~~~~~~~~i~~~s~sK~-~~~G~r 234 (367)
T 3euc_A 163 LAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES---W---MS-RLTDFGNLLVMRTVSKL-GLAGIR 234 (367)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC---S---GG-GGGTCTTEEEEEECCCT-TSCSCC
T ss_pred EcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc---h---HH-HHhhCCCEEEEecchhh-cccccC
Confidence 789999999999999999999999999 99999999999987542 1 11 22344689999999999 999999
Q ss_pred eeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 304 VGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 304 vG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+||++ ++ +++.+++..... ..+++.++|.++..+|++
T Consensus 235 ~G~~~--~~-----~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~ 271 (367)
T 3euc_A 235 LGYVA--GD-----PQWLEQLDKVRP--PYNVNVLTEATALFALEH 271 (367)
T ss_dssp EEEEE--EC-----HHHHHHHGGGCC--SSCCCHHHHHHHHHHHTT
T ss_pred ceeee--eC-----HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcC
Confidence 99988 76 566666666554 245888999988888764
No 67
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.97 E-value=5.5e-32 Score=272.20 Aligned_cols=245 Identities=14% Similarity=0.099 Sum_probs=188.0
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhCC-C--CCCccCCcEEEEecC
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYL-PIVGLAEFNKLSAKLILGA-D--SPAIRENRVTTVQCL 149 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~-p~~G~~~lr~aia~~~~g~-~--~~~~~~~~v~~~~t~ 149 (350)
+.|+|++|.| +.. +.+.++++.+.+. . ..|. |..|.++||+++++++... . .....+++|++ |+
T Consensus 104 ~~i~l~~g~~-~~~----~~~~v~a~~~~~~--~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~--t~ 171 (533)
T 3f6t_A 104 DAVNYCHTEL-GLN----RDKVVAEWVNGAV--A---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFP--TE 171 (533)
T ss_dssp HHHHHHHHTT-CCC----HHHHHHHHHHHHH--T---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEE--EE
T ss_pred hheeccCCCC-CcC----CcHHHHHHHHHHH--h---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEE--EC
Confidence 4799999998 432 3567777776665 2 2354 7899999999999996211 0 11112478998 99
Q ss_pred CchhHHHHHHHHH-H--HhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeec--CCCCCCCHHHHHHHhhcCCCCcEEE
Q 018820 150 SGTGSLRVGAEFL-A--RHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYD--PATRGLNFQGLLEDLGSAPAGAIVL 224 (350)
Q Consensus 150 G~~~al~l~~~l~-~--~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~--~~~~~~d~~~l~~~l~~~~~~~~~l 224 (350)
|+++++.++...+ + .+.+||.|++++|+|..|..+++..|++++.+++.. ++++++|++.+++.+..+ ..++
T Consensus 172 G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~---~k~v 248 (533)
T 3f6t_A 172 GGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPS---IKAL 248 (533)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTT---EEEE
T ss_pred CHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCC---CeEE
Confidence 9999998854321 0 467999999999999999999999999999998843 456889999999988643 3477
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHH-hcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcc
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMR-SKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGER 303 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~-~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R 303 (350)
++++||||||.+++.+++++|+++|+ ++|+++|+||+|.+|.++. .++... ..+++|+++||||.+|++|+|
T Consensus 249 ~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~-----~~~~~~--~~~~~i~~~S~SK~~g~~G~R 321 (533)
T 3f6t_A 249 IVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNF-----KSIYSV--VPYNTMLVYSYSKLFGCTGWR 321 (533)
T ss_dssp EEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTC-----CCHHHH--SGGGEEEEEESHHHHTCGGGC
T ss_pred EEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCc-----cCHhhc--CCCCEEEEecCcccCCCcccc
Confidence 77799999999999999999999999 6899999999999998752 122222 235899999999999999999
Q ss_pred eeEEEEeeCChhHHHHHHHH--------------------------------HHHhhcccccCCChhHHHH
Q 018820 304 VGALSIVCKTADVAGRVESQ--------------------------------VKLVIRPMYSNPPIHGASI 342 (350)
Q Consensus 304 vG~l~~v~~~~~~~~~~~~~--------------------------------l~~~~~~~~~~~~~~~q~i 342 (350)
+||++ +++.+..+++++. +........++++.+.|.+
T Consensus 322 iG~l~--~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a 390 (533)
T 3f6t_A 322 LGVIA--LNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIM 390 (533)
T ss_dssp EEEEE--EESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHH
T ss_pred eEEEE--ECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHH
Confidence 99988 7766554555443 2445556677888888877
No 68
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.97 E-value=1.6e-30 Score=247.51 Aligned_cols=240 Identities=15% Similarity=0.144 Sum_probs=186.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
.++.|+|+.|.+ .. .+.+.+.++..... . ....| |..|..+||+++++++ +. .+++|++ |+|+
T Consensus 31 ~~~~i~l~~~~~-~~----~~~~~v~~a~~~~~--~-~~~~y-~~~~~~~lr~~la~~~-~~-----~~~~v~~--~~g~ 93 (363)
T 3ffh_A 31 LTKITKLSSNEN-PL----GTSKKVAAIQANSS--V-ETEIY-PDGWASSLRKEVADFY-QL-----EEEELIF--TAGV 93 (363)
T ss_dssp CSCCEECSSCSC-TT----CCCHHHHHHHHTCB--S-CCCBC-----CHHHHHHHHHHH-TC-----CGGGEEE--ESSH
T ss_pred CCceEEccCCCC-CC----CCCHHHHHHHHHHH--H-HhhcC-CCcchHHHHHHHHHHh-CC-----ChhhEEE--eCCH
Confidence 357999999987 32 23456666655533 2 23446 6678999999999996 42 2679999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++ +.+++.+||+|++++|+|..+...++..|++++.+|+ ++ ++.+|++.+++.+.++ ..++++++|||
T Consensus 94 t~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~---~~~v~~~~p~n 166 (363)
T 3ffh_A 94 DELIELL--TRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPL-LQ-DGEHDLEGMLNAIDEK---TTIVWICNPNN 166 (363)
T ss_dssp HHHHHHH--HHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEEC-CT-TSCCCHHHHHHHCCTT---EEEEEEESSCT
T ss_pred HHHHHHH--HHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecC-CC-CCCcCHHHHHHhcccC---CCEEEEeCCCC
Confidence 9999884 3445789999999999999999999999999999998 54 5789999999998653 44778899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++.+|++.|++ |+++|+||+|.+|.++. . ..........+++|++.||||.+|++|+|+||++ +
T Consensus 167 ptG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~~~---~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~--~ 239 (363)
T 3ffh_A 167 PTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVTPQ---P-EKHEKLVRTYKNLIITRTFSKIYGLASARVGYGI--A 239 (363)
T ss_dssp TTCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCSSC---C-CCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEE--E
T ss_pred CcCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcCcc---c-cCHHHHhhcCCCEEEEeechhhhcCchhceeeee--c
Confidence 99999999999999998888 99999999999888632 1 1111222345689999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++.+++..... ..+++.++|.++...|++
T Consensus 240 ~-----~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~ 270 (363)
T 3ffh_A 240 D-----KEIIRQLNIVRP--PFNTTSIGQKLAIEAIKD 270 (363)
T ss_dssp C-----HHHHHHHHHTCC--SCCCBHHHHHHHHHHHHC
T ss_pred C-----HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcC
Confidence 5 566666666554 346888899888888754
No 69
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.97 E-value=1.1e-31 Score=270.67 Aligned_cols=222 Identities=15% Similarity=0.135 Sum_probs=165.9
Q ss_pred eEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHh----CCCCCCccCCcEEEEecCC
Q 018820 75 KLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLIL----GADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 75 ~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~----g~~~~~~~~~~v~~~~t~G 150 (350)
.|+|++|.+ +. .+...+++..+.+. ...|++..|.++||++++++.+ +.......+++|++ |+|
T Consensus 106 ~i~l~~g~~-~~----~~~~~~~al~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~--t~G 173 (546)
T 2zy4_A 106 SLSYVRDQL-GL----DPAAFLHEMVDGIL-----GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFA--VEG 173 (546)
T ss_dssp HHHHHHHTS-CC----CHHHHHHHHHHHHH-----TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEE--EEH
T ss_pred hhecccCCC-CC----CChHHHHHHHHhhh-----cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEE--ECC
Confidence 789999988 32 12344444444433 2469999999999999888643 11111123689998 999
Q ss_pred chhHHHHHHHHHH---HhcCCCEEEEcCCCCCChHHHHHH--cCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 151 GTGSLRVGAEFLA---RHYHQRTIYIPQPTWGNHPKVFTL--AGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 151 ~~~al~l~~~l~~---~~~~gd~Vlv~~P~y~~~~~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
+++++.++...+. ++.+||.|++++|+|+.|...... .|++++.+++..+++|.+|++.+++.+.. +..+++
T Consensus 174 ~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~v~ 250 (546)
T 2zy4_A 174 GTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP---AIKIFF 250 (546)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGST---TEEEEE
T ss_pred HHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCC---CCeEEE
Confidence 9999988543321 357999999999999999988553 47899999983334578999999876643 334777
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHH--HhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcc
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLM--RSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGER 303 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~--~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R 303 (350)
++|||||||.+++.+++++|+++| +++|++||+||+|.+|.++. .++... ..+++|+++||||.+|++|+|
T Consensus 251 l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~-----~s~~~~--~~~~~i~~~S~SK~~g~~GlR 323 (546)
T 2zy4_A 251 CVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDF-----QSLFAI--CPENTLLVYSFSKYFGATGWR 323 (546)
T ss_dssp EESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTC-----CCHHHH--CGGGEEEEEESTTTTTCGGGC
T ss_pred EECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccC-----cCHHHh--CCCCEEEEEeCccccCCCCcc
Confidence 789999999999999999999999 78999999999999998531 122222 235899999999999999999
Q ss_pred eeEEEEeeCChhHHHHH
Q 018820 304 VGALSIVCKTADVAGRV 320 (350)
Q Consensus 304 vG~l~~v~~~~~~~~~~ 320 (350)
+||++ +++++..+++
T Consensus 324 iG~~~--~~~~~l~~~l 338 (546)
T 2zy4_A 324 LGVVA--AHQQNVFDLA 338 (546)
T ss_dssp EEEEE--EESSCHHHHH
T ss_pred eEEEE--ECCHHHHHHH
Confidence 99988 7654344444
No 70
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=2e-30 Score=249.48 Aligned_cols=248 Identities=13% Similarity=0.014 Sum_probs=182.6
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHH-HHHHHHHHH---hCCCCCCccCCcEEEEec
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAE-FNKLSAKLI---LGADSPAIRENRVTTVQC 148 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~-lr~aia~~~---~g~~~~~~~~~~v~~~~t 148 (350)
++.|+|+.|.+ +.. +.+.+.++..... ......|++. .++ ||+++++++ +|... .+++|++ |
T Consensus 28 ~~~i~l~~~~~-~~~----~~~~v~~a~~~~~--~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~---~~~~v~~--t 93 (390)
T 1d2f_A 28 ADLLPFTISDM-DFA----TAPCIIEALNQRL--MHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAI---DSQTVVY--G 93 (390)
T ss_dssp --CEECCSSSC-SSC----CCHHHHHHHHHHH--TTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCC---CGGGEEE--E
T ss_pred CCeeEeeecCC-CCC----CCHHHHHHHHHHH--hCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCC---CHHHEEE--c
Confidence 46899999987 321 3556666665554 1223568664 788 999999996 34333 3789999 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-CCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-TRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
+|+++++.++ +.++..+||+|+++.|+|..+...++..|++++.+|+..++ ++.+|++.+++.++.. +..+++++
T Consensus 94 ~g~~~al~~~--~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~l~ 169 (390)
T 1d2f_A 94 PSVIYMVSEL--IRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP--ECKIMLLC 169 (390)
T ss_dssp SCHHHHHHHH--HHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTST--TEEEEEEE
T ss_pred CCHHHHHHHH--HHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccC--CCeEEEEe
Confidence 9999999884 44556789999999999999999999999999999983222 3568999999998642 23466778
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l 307 (350)
+||||||.+++.+++++|+++|+++|+++|+||+|.+|.+++ +...++..+....... +.||||.+|++|+|+||+
T Consensus 170 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~d~--~~s~sK~~~~~G~r~G~~ 245 (390)
T 1d2f_A 170 SPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGE--QPHIPWSNVARGDWAL--LTSGSKSFNIPALTGAYG 245 (390)
T ss_dssp SSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSS--SCCCCGGGTCCSSEEE--EECSHHHHTCGGGCCEEE
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC--CCCcCHHHcchhhHhh--ccCccHhhcccChhheEE
Confidence 999999999999999999999999999999999999998753 2112222221110023 999999999999999998
Q ss_pred EEeeCChhHHHHHHHHHHHhhc--ccccCCChhHHHHHHHHhc
Q 018820 308 SIVCKTADVAGRVESQVKLVIR--PMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 308 ~~v~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~q~i~~~~L~ 348 (350)
+ +++++ +.+.+..... ..+++++.++|.++...|+
T Consensus 246 ~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 282 (390)
T 1d2f_A 246 I--IENSS----SRDAYLSALKGRDGLSSPSVLALTAHIAAYQ 282 (390)
T ss_dssp E--ECSHH----HHHHHHHHHHTTSCCCSCCHHHHHHHHHHHH
T ss_pred E--ECCHH----HHHHHHHHHhhhcccCCCCHHHHHHHHHHHh
Confidence 8 76654 4444444333 3445778888877766664
No 71
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=2.3e-29 Score=240.10 Aligned_cols=250 Identities=16% Similarity=0.160 Sum_probs=183.6
Q ss_pred cccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCcc
Q 018820 60 ILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIR 139 (350)
Q Consensus 60 i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~ 139 (350)
+..+..++.. .+.+.|||+.|.+ +. + +.+.+.++....... ...|++ .|..+||+++++++ +.+
T Consensus 12 ~~~~~~~~~~-~~~~~idl~~~~~-~~-~---~~~~v~~a~~~~~~~---~~~y~~-~~~~~l~~~la~~~-~~~----- 75 (364)
T 1lc5_A 12 IREPATVLGI-SPDQLLDFSANIN-PL-G---MPVSVKRALIDNLDC---IERYPD-ADYFHLHQALARHH-QVP----- 75 (364)
T ss_dssp CHHHHHHHTS-CGGGSEECSSCCC-TT-C---CCHHHHHHHHHTGGG---GGSCCC-TTCHHHHHHHHHHH-TSC-----
T ss_pred HHHHHHhcCC-CccceEEeccccC-CC-C---CCHHHHHHHHHHHHH---hhcCCC-CCHHHHHHHHHHHH-CcC-----
Confidence 3344444544 2456899999986 32 2 245556665554311 356854 58999999999996 432
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecC-CCCCCCHHHHHHHhhcCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDP-ATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~ 218 (350)
+++|++ |+|+++++.++. .. + +||+|++++|+|..+...++..|++++.+|. ++ +++.+ ++.+.+.+..++
T Consensus 76 ~~~v~~--~~g~~~al~~~~--~~-~-~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~-~~~~~~~~-l~~~~~~~~~~~ 147 (364)
T 1lc5_A 76 ASWILA--GNGETESIFTVA--SG-L-KPRRAMIVTPGFAEYGRALAQSGCEIRRWSL-READGWQL-TDAILEALTPDL 147 (364)
T ss_dssp GGGEEE--ESSHHHHHHHHH--HH-H-CCSEEEEEESCCTHHHHHHHHTTCEEEEEEC-CGGGTTCC-CTTHHHHCCTTC
T ss_pred HHHEEE--CCCHHHHHHHHH--HH-c-CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeC-Ccccccch-hHHHHHhccCCC
Confidence 678999 999999998854 33 3 7899999999999999999999999999998 43 33433 465666554333
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
.++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.++. .. .. .+....++++++.||||.+|
T Consensus 148 ---~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~--~~-~~~~~~~~~i~~~s~sK~~~ 219 (364)
T 1lc5_A 148 ---DCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHE--TG--FI-PALKDNPHIWVLRSLTKFYA 219 (364)
T ss_dssp ---CEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTC--CC--SG-GGCTTCTTEEEEEESTTTTT
T ss_pred ---CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCc--cc--hh-hHhccCCCEEEEEECchhhc
Confidence 267779999999999999999999999999999999999999988642 11 11 12233457999999999999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|+|+||++ +.+++ +.+++..... ..+++.++|.++..+|++
T Consensus 220 ~~G~r~G~~~--~~~~~----~~~~l~~~~~--~~~~~~~~~~~~~~~l~~ 262 (364)
T 1lc5_A 220 IPGLRLGYLV--NSDDA----AMARMRRQQM--PWSVNALAALAGEVALQD 262 (364)
T ss_dssp CTTTCCEEEE--CCCHH----HHHHHHHHSC--TTCSCHHHHHHHHHGGGC
T ss_pred CCccceEEEE--ECCHH----HHHHHHHhCC--CCCCCHHHHHHHHHHHhC
Confidence 9999999976 45544 4444444443 346788999998888864
No 72
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.97 E-value=5.1e-30 Score=249.73 Aligned_cols=251 Identities=13% Similarity=0.094 Sum_probs=188.1
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEec
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQC 148 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t 148 (350)
+.+.|+|++|.+ +.. ..+.|.+++..... . ..+.|.+. ..++++++++++ ++.+. .+++|++ |
T Consensus 60 g~~~i~~~~~~~-~~~----~~~~v~~a~~~~~~-~-~~~~y~~~--~~~l~~~l~~~l~~~~g~~~---~~~~v~~--~ 125 (421)
T 3l8a_A 60 NPELLQMWVADM-DFL----PVPEIKEAIINYGR-E-HIFGYNYF--NDDLYQAVIDWERKEHDYAV---VKEDILF--I 125 (421)
T ss_dssp CTTCEECCSSCC-CSC----CCHHHHHHHHHHHH-H-CCSSCBCC--CHHHHHHHHHHHHHHHCCCC---CGGGEEE--E
T ss_pred CCCeeecccCCC-CCC----CCHHHHHHHHHHHh-c-CCcCCCCC--CHHHHHHHHHHHHHHhCCCC---CHHHEEE--c
Confidence 568999999977 432 24445555444331 1 23557654 389999999994 44332 3789999 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee-cCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY-DPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
+|+++|+.++. .....+||+|++++|+|..+...++..|.+++.+|+. ...++.+|++.+++.++.. +..+++++
T Consensus 126 ~g~~ea~~~a~--~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~--~~~~vil~ 201 (421)
T 3l8a_A 126 DGVVPAISIAL--QAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDN--NVKIYLLC 201 (421)
T ss_dssp SCHHHHHHHHH--HHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHT--TEEEEEEE
T ss_pred CCHHHHHHHHH--HHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhcc--CCeEEEEC
Confidence 99999998854 4457799999999999999999999999999999984 2334678999999999731 23477889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh-cCCcEEEEeccccccCccCcceeE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA-DGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
+||||||.+++++++++|+++|++||+++|+||+|.+|.+++ ....++..+.. ..++++++.||||.+|++|+|+||
T Consensus 202 ~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~ 279 (421)
T 3l8a_A 202 SPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFG--NTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSF 279 (421)
T ss_dssp SSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--CCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEE
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCC--CCCccHHHcCchhcCcEEEEEeChhhccCchhheEe
Confidence 999999999999999999999999999999999999998864 21122222221 135789999999999999999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhh-cccccCCChhHHHHHHHHhc
Q 018820 307 LSIVCKTADVAGRVESQVKLVI-RPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~i~~~~L~ 348 (350)
++ +++++..+.+ .... ...+.+++.+++.++...|+
T Consensus 280 ~~--~~~~~l~~~~----~~~~~~~~~~~~n~~~~~a~~aal~ 316 (421)
T 3l8a_A 280 AI--IQNESLRRKF----QYRQLANNQHEVPTVGMIATQAAFQ 316 (421)
T ss_dssp EE--CCSHHHHHHH----HHHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred EE--cCCHHHHHHH----HHHHHhcccCCCCHHHHHHHHHHHh
Confidence 88 8766544444 3332 23345678888887776664
No 73
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.97 E-value=1e-30 Score=252.86 Aligned_cols=234 Identities=15% Similarity=0.093 Sum_probs=166.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhh-cC-CCCCCCCCCCCc-----HHHHHHHHHHHhCCCCCCccC-Cc
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVN-DR-SRVKEYLPIVGL-----AEFNKLSAKLILGADSPAIRE-NR 142 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~-~~-~~~~~Y~p~~G~-----~~lr~aia~~~~g~~~~~~~~-~~ 142 (350)
.++++|+|+.|.| +. ...+.++++...... +. .....|++..|. ++||+++|+++...+. .+.+ ++
T Consensus 20 ~~~~~i~l~~g~p-~~----~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~-~~~~~~~ 93 (391)
T 3bwn_A 20 MSDFVVNLDHGDP-TA----YEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGN-AATEDRY 93 (391)
T ss_dssp TTTSCEECSSCCC-GG----GHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCS-BCCSSSE
T ss_pred CCCCeeEcCCCCC-CC----CCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCC-CCCCCCe
Confidence 4567899999998 42 223445554322111 11 134679999999 9999999999532111 1224 68
Q ss_pred EEEEecCCchhHHHHHHHHHHHhcCCC----EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 143 VTTVQCLSGTGSLRVGAEFLARHYHQR----TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 143 v~~~~t~G~~~al~l~~~l~~~~~~gd----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
|++ |+|+++++.+++ .+++.+|| +|++++|+|+.|..+++..|++++.++. +.++ ++ ..
T Consensus 94 i~~--t~G~~~al~~~~--~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~~--l~--------~~-- 156 (391)
T 3bwn_A 94 IVV--GTGSTQLCQAAV--HALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEG-DAWG--FD--------KK-- 156 (391)
T ss_dssp EEE--EEHHHHHHHHHH--HHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEE-ESTT--CC--------CC--
T ss_pred EEE--eCChHHHHHHHH--HHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecC-CHHH--cC--------CC--
Confidence 999 999999998854 45578999 9999999999999999999999999988 5543 22 11
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
+..++++++||||||.+++ +|++.+..++++||+||+|.+ +. ..++. ...+++|+++||||.||
T Consensus 157 -~~k~v~l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~---~~----~~~l~---~~~~~~i~~~S~SK~~g 220 (391)
T 3bwn_A 157 -GPYIELVTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW---PH----YTPIT---RRQDHDIMLFTFSKITG 220 (391)
T ss_dssp -SCEEEEEESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS---TT----TSCCC---CCBCCSEEEEEHHHHHS
T ss_pred -CCEEEEECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC---CC----CCccc---cCCCCeEEEEechhhcC
Confidence 2346778999999999996 344422223399999999973 11 01111 13468999999999999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|+|+||++ +++ +++++++.........+++.++|.++..+|++
T Consensus 221 ~~GlRiG~~~--~~~----~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~ 265 (391)
T 3bwn_A 221 HAGSRIGWAL--VKD----KEVAKKMVEYIIVNSIGVSKESQVRTAKILNV 265 (391)
T ss_dssp CGGGCEEEEE--ECC----HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred CCccceEEEE--ecC----HHHHHHHHHHhcccccCCCHHHHHHHHHHHhC
Confidence 9999999988 744 45666666666555678899999999888863
No 74
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.97 E-value=2.8e-29 Score=238.37 Aligned_cols=238 Identities=14% Similarity=0.152 Sum_probs=181.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+++.|||+.|.+ ... +.+.+.++....... ...| |..|..+||+++++++ +. .+++|++ |+|
T Consensus 24 ~~~~~idl~~~~~-~~~----~~~~v~~a~~~~~~~---~~~y-~~~~~~~l~~~la~~~-~~-----~~~~i~~--~~g 86 (361)
T 3ftb_A 24 KGRELLDYSSNIN-PLG----IPKSFLNNIDEGIKN---LGVY-PDVNYRRLNKSIENYL-KL-----KDIGIVL--GNG 86 (361)
T ss_dssp ----CEETTCCCC-TTC----SCHHHHTTHHHHHHG---GGSC-CCTTCHHHHHHHHHHH-TC-----CSCEEEE--ESS
T ss_pred CCCCEEEecCCCC-CCC----CCHHHHHHHHHHHHH---hcCC-CCccHHHHHHHHHHHh-CC-----CcceEEE--cCC
Confidence 4567999999977 221 234555554443311 2457 5678999999999996 32 2679999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++++.++. .. + |+|++++|+|..+...++..|++++.+|+ +++ .+++++.+++.+++ ++ ++++++||
T Consensus 87 ~t~al~~~~--~~-~---d~vi~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~~~l~~~l~~-~~---~v~i~~p~ 154 (361)
T 3ftb_A 87 ASEIIELSI--SL-F---EKILIIVPSYAEYEINAKKHGVSVVFSYL-DEN-MCIDYEDIISKIDD-VD---SVIIGNPN 154 (361)
T ss_dssp HHHHHHHHH--TT-C---SEEEEEESCCTHHHHHHHHTTCEEEEEEC-CTT-SCCCHHHHHHHTTT-CS---EEEEETTB
T ss_pred HHHHHHHHH--HH-c---CcEEEecCChHHHHHHHHHcCCeEEEeec-Ccc-cCCCHHHHHHhccC-CC---EEEEeCCC
Confidence 999998843 22 2 89999999999999999999999999998 543 35788999998876 44 77789999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++++|+++|++||+++|+||+|.+|.++. . .....+....++++++.||||.+|++|+|+||++
T Consensus 155 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~-- 228 (361)
T 3ftb_A 155 NPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDP--S--SSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGI-- 228 (361)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCT--T--SSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEE--
T ss_pred CCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCc--c--cchhHhcccCCCEEEEeeChhhcCCCCcceeEEE--
Confidence 999999999999999999999999999999999988751 1 1122222344689999999999999999999977
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+.++ .+.+++..... ..+++.+++.++...|++
T Consensus 229 ~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 261 (361)
T 3ftb_A 229 TNNK----EIAAKIKAKQN--PWNINCFAEMAAINCLKD 261 (361)
T ss_dssp ESCH----HHHHHHHTTSC--TTCSCHHHHHHHHHTSSC
T ss_pred eCCH----HHHHHHHhhCC--CCCCCHHHHHHHHHHhcC
Confidence 5554 45555555443 247888999888887764
No 75
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.94 E-value=4.2e-32 Score=261.74 Aligned_cols=254 Identities=14% Similarity=0.092 Sum_probs=186.3
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
++.|+|++|.+ +... .+.+.++..... ......|.+. ..+||+++++++.......+.+++|++ |+|++
T Consensus 31 ~~~i~l~~~~~-~~~~----~~~v~~a~~~~~--~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~--~~g~~ 99 (392)
T 3b1d_A 31 PQLLPAWIADM-DFEV----MPEVKQAIHDYA--EQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVF--VEGVV 99 (392)
Confidence 37899999998 4332 334444443333 1123557654 889999999985322111133788998 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCC-CCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPA-TRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~-~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
+++.++. .++..+||+|++++|+|..+...++..|++++.+++.+++ ++.+|++.+++.+++. +..++++++|||
T Consensus 100 ~a~~~~~--~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~--~~~~v~~~~~~n 175 (392)
T 3b1d_A 100 PAISIAI--QAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVEN--DVKLYLLCNPHN 175 (392)
Confidence 9998843 4446789999999999999999999999999999883232 3668999999988632 122666799999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-CCcEEEEeccccccCccCcceeEEEEe
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-GGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
|||.+++.+++++|+++|+++|+++|+||+|.+|.+++ ....+...+... .++++++.||||.||++|+|+||++
T Consensus 176 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-- 251 (392)
T 3b1d_A 176 PGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFG--HEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAI-- 251 (392)
Confidence 99999999999999999999999999999999998753 222233223221 4589999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhccc-ccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPM-YSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~i~~~~L~~ 349 (350)
++++ .+++++....... +++++.++|.++..+|++
T Consensus 252 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (392)
T 3b1d_A 252 IENP----TLCAQFKHQQLVNNHHEVSSLGYIATETAYRY 287 (392)
Confidence 7643 2555555554443 346778888877776653
No 76
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.96 E-value=1.6e-28 Score=234.85 Aligned_cols=240 Identities=17% Similarity=0.187 Sum_probs=177.9
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHH-HhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEecC
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQ-LVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~-l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t~ 149 (350)
..|||+.|.+ +... .+.+.++... +.........|++..| .+||+++++++ +|.+.. +++|++ |+
T Consensus 31 ~~idl~~~~~-~~~~----~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~---~~~v~~--~~ 99 (369)
T 3cq5_A 31 VDIRLNTNEN-PYPP----SEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVT---RDNLWA--AN 99 (369)
T ss_dssp CSEECSSCCC-CSCC----CHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCC---GGGEEE--ES
T ss_pred cceeccCCCC-CCCC----CHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCC---hHhEEE--CC
Confidence 3599999988 3222 3334443333 3211112356876666 79999999995 343323 678998 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecC
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHAC 228 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~ 228 (350)
|+++++.++ +.+++.+||.|++++|+|+.+...++..|++++.+|. ++ ++++|++.+++.+++ +++ ++++++
T Consensus 100 G~~~al~~~--~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~~~~---~v~~~~ 172 (369)
T 3cq5_A 100 GSNEILQQL--LQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSR-GA-DFRIDMDVALEEIRAKQPD---IVFVTT 172 (369)
T ss_dssp HHHHHHHHH--HHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEEC-CT-TSSCCHHHHHHHHHHHCCS---EEEEES
T ss_pred ChHHHHHHH--HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecC-Cc-CCCCCHHHHHHHhhccCCC---EEEEeC
Confidence 999999884 3445789999999999999999999999999999996 43 468999999999876 443 666799
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC-cEEEEeccccccCccCcceeEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG-ECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~-~vi~~~S~SK~~gl~G~RvG~l 307 (350)
||||||.+++.+++.+|++.| ++++|+||+|.+|.++ . +...+.+..+ +++++.||||.+|++|+|+||+
T Consensus 173 ~~nptG~~~~~~~l~~l~~~~---~~~li~De~~~~~~~~---~---~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 243 (369)
T 3cq5_A 173 PNNPTGDVTSLDDVERIINVA---PGIVIVDEAYAEFSPS---P---SATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYF 243 (369)
T ss_dssp SCTTTCCCCCHHHHHHHHHHC---SSEEEEECTTGGGCCS---C---CGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHhC---CCEEEEECCchhhcCC---c---chHHHHhhCCCCEEEEEechHhcCCcccceEEE
Confidence 999999999998887776654 5999999999998753 1 1112222334 8999999999999999999998
Q ss_pred EEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 308 SIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 308 ~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ ++ +++.+.+...... .+++.+.|.++..+|++
T Consensus 244 ~--~~-----~~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~ 276 (369)
T 3cq5_A 244 V--AN-----PAFIDAVMLVRLP--YHLSALSQAAAIVALRH 276 (369)
T ss_dssp E--EC-----THHHHHHHTTSCT--TCSCHHHHHHHHHHHHT
T ss_pred E--eC-----HHHHHHHHHcCCC--CCCCHHHHHHHHHHhcC
Confidence 8 76 3456666554432 35888899888887764
No 77
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.96 E-value=1.6e-28 Score=232.74 Aligned_cols=229 Identities=14% Similarity=0.101 Sum_probs=171.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+.+.|||+.|.+ ... +.+.+.++..... . ....|++..+ ++||+++++++ +. .+++|++ |+|+
T Consensus 14 g~~~id~~~~~~-~~~----~~~~v~~a~~~~~--~-~~~~y~~~~~-~~lr~~la~~~-~~-----~~~~i~~--t~g~ 76 (350)
T 3fkd_A 14 SSEIVNFSTTVW-TDG----DKDHLEKHLVENL--N-CIRHYPEPDA-GTLRQMLAKRN-SV-----DNNAILV--TNGP 76 (350)
T ss_dssp --CCEECSCCSC-CCS----CCHHHHHHHHHTG--G-GGGSCCCTTC-HHHHHHHHHHT-TC-----CGGGEEE--ESHH
T ss_pred cccEEEccCCCC-CCC----CCHHHHHHHHHhH--h-HHhcCCCCcH-HHHHHHHHHHh-Cc-----CHHHEEE--cCCH
Confidence 467999999987 222 2445555554433 1 2356877777 89999999985 43 2679999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++. ..+. ||+|++++|+|..+...++..|++++.++..++ ..++++ .+++ ++++++|||
T Consensus 77 ~~al~~~~--~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~--------~~~~---~v~i~~p~n 140 (350)
T 3fkd_A 77 TAAFYQIA--QAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNED-IGEADF--------SNMD---FCWLCNPNN 140 (350)
T ss_dssp HHHHHHHH--HHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSC-GGGSCC--------TTCS---EEEEESSCT
T ss_pred HHHHHHHH--HHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCc-cccCcc--------CCCC---EEEEeCCCC
Confidence 99998854 3333 999999999999999999999999999987222 123343 2233 677799999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++++|+++|+++ ++|+||+|.+|.+++ .. .. ......++++++.||||.+|++|+|+||++ +
T Consensus 141 ptG~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~--~~--~~-~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~--~ 211 (350)
T 3fkd_A 141 PDGRLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEE--VI--RP-ADIKGRKNLVMVYSFSHAYGIPGLRIGYIV--A 211 (350)
T ss_dssp TTCCCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSC--CC--CG-GGGTTCSSEEEEEESHHHHSCGGGCCEEEE--C
T ss_pred CcCCCCCHHHHHHHHHhCCCC--EEEEECchhhhccCc--ch--hh-HHhhcCCCEEEEecCchhccCcchheEeEE--e
Confidence 999999999999999988765 999999999998764 11 11 222344689999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++.+++..... ..+++.++|.++..+|++
T Consensus 212 ~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 242 (350)
T 3fkd_A 212 N-----KDFMKRVAAFST--PWAVNALAIEAAKFILIH 242 (350)
T ss_dssp C-----HHHHHHHHTTCC--TTCSCHHHHHHHHHHHHC
T ss_pred C-----HHHHHHHHHhCC--CCCCCHHHHHHHHHHHhC
Confidence 5 566666665543 346889999999888865
No 78
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=3.2e-28 Score=228.99 Aligned_cols=229 Identities=16% Similarity=0.161 Sum_probs=175.1
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
..+.|+|+.+++. ..+.+.++++..... .. ...| |..|.++||+++++++ +.+ +++|++ |+|+
T Consensus 15 ~~~~i~l~~n~~~-----~~~~~~v~~a~~~~~--~~-~~~y-~~~~~~~lr~~la~~~-~~~-----~~~i~~--t~G~ 77 (337)
T 3p1t_A 15 AAQAVCLAFNENP-----EAVEPRVQAAIAAAA--AR-INRY-PFDAEPRVMRKLAEHF-SCP-----EDNLML--VRGI 77 (337)
T ss_dssp CCCCEECSSCCCC-----SCCCHHHHHHHHHHG--GG-TTSC-CTTHHHHHHHHHHHHH-TSC-----GGGEEE--ESHH
T ss_pred CCCceEeeCCCCC-----CCCCHHHHHHHHHhh--hh-hccC-CCCchHHHHHHHHHHh-CcC-----HHHEEE--eCCH
Confidence 4568999999762 123566677666655 12 3568 5679999999999996 432 679999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
++++.++. .. + +||+|++++|+|..|...++..|++++.+|+ ++ ++++|++.+++.. +..++++++|||
T Consensus 78 ~~~l~~~~--~~-~-~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~~-----~~~~v~i~~p~n 146 (337)
T 3p1t_A 78 DECFDRIS--AE-F-SSMRFVTAWPGFDGYRARIAVSGLRHFEIGL-TD-DLLLDPNDLAQVS-----RDDCVVLANPSN 146 (337)
T ss_dssp HHHHHHHH--HH-S-TTSEEEEESSSCSHHHHHHTTSCCEEEEECB-CT-TSSBCHHHHTTCC-----TTEEEEEESSCT
T ss_pred HHHHHHHH--Hh-c-CCCeEEEeCCCcHHHHHHHHHcCCEEEEecC-CC-CCCCCHHHHHhhc-----CCCEEEEeCCCC
Confidence 99998853 32 3 8999999999999999999999999999998 43 4789998887641 234888999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEee
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVC 311 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~ 311 (350)
|||.+++.+++.+| |+++++ +|+||+|.+|..... . . .....++++++||||.||++|+|+||++ +
T Consensus 147 ptG~~~~~~~l~~l---~~~~~~-~ivDea~~~~~~~~~--~--~----~~~~~~~i~~~S~sK~~g~~G~r~G~~~--~ 212 (337)
T 3p1t_A 147 PTGQALSAGELDQL---RQRAGK-LLIDETYVDYSSFRA--R--G----LAYGENELVFRSFSKSYGLAGLRLGALF--G 212 (337)
T ss_dssp TTCCCCCHHHHHHH---HHHCSE-EEEECTTGGGSSCSS--S--C----CCCBTTEEEEEESSSTTCCTTTCCEEEE--C
T ss_pred CCCCCCCHHHHHHH---HHhCCc-EEEECCChhhccccc--c--c----cccCCCEEEEeeCchhccCcchheEEEE--e
Confidence 99999999987665 556776 555999998875431 1 0 1223579999999999999999999988 7
Q ss_pred CChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 312 KTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+ +++++++..... ..+++.++|.++..+|++
T Consensus 213 ~-----~~~~~~l~~~~~--~~~~~~~~~~a~~~~l~~ 243 (337)
T 3p1t_A 213 P-----SELIAAMKRKQW--FCNVGTLDLHALEAALDN 243 (337)
T ss_dssp C-----HHHHHHHHTTSC--TTCSCHHHHHHHHHHHTC
T ss_pred C-----HHHHHHHHhhcC--CCCCCHHHHHHHHHHhCC
Confidence 6 566666665443 456788888888888764
No 79
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.96 E-value=1.4e-27 Score=227.31 Aligned_cols=234 Identities=16% Similarity=0.195 Sum_probs=172.5
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+.+.|+|+.|.+ +.. +.+.+.++........ .....|+. .+..+||+++++++ |. .+++|++ |+|
T Consensus 25 ~~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~lr~~la~~~-g~-----~~~~i~~--t~g 90 (360)
T 3hdo_A 25 IASWIKLNTNEN-PYP----PSPEVVKAILEELGPDGAALRIYPS-ASSQKLREVAGELY-GF-----DPSWIIM--ANG 90 (360)
T ss_dssp CTTSEECSSCCC-SSC----CCHHHHHHHHHHHTTTCGGGGSCCC-SSCHHHHHHHHHHH-TC-----CGGGEEE--ESS
T ss_pred ccceeeccCCCC-CCC----CCHHHHHHHHHHHhcccchhhcCCC-CchHHHHHHHHHHh-Cc-----CcceEEE--cCC
Confidence 457999999988 322 2455555555544111 01355744 46799999999996 42 2679999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAH 230 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~ 230 (350)
+++++.++ +.+++.+||+|++++|+|..+...++..|++++.+++ +++ +.+ +.+++.+ .. + ++++++||
T Consensus 91 ~~~al~~~--~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~-~~~--~~l~~~~---~~-~-~v~i~~p~ 159 (360)
T 3hdo_A 91 SDEVLNNL--IRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGL-TGD-FRI--AGFPERY---EG-K-VFFLTTPN 159 (360)
T ss_dssp HHHHHHHH--HHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECB-CTT-SSB--TTCCSSB---CS-S-EEEEESSC
T ss_pred HHHHHHHH--HHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeC-CCC-CCH--HHHHhhc---CC-C-EEEEeCCC
Confidence 99999984 4455789999999999999999999999999999998 432 333 3332211 12 2 77789999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEe
Q 018820 231 NPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIV 310 (350)
Q Consensus 231 NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v 310 (350)
||||.+++.+++. ++|+++|+++|+||+|.+|... . ... +....++++++.||||.+|++|+|+||++
T Consensus 160 nptG~~~~~~~l~---~l~~~~~~~li~De~~~~~~~~----~--~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~-- 227 (360)
T 3hdo_A 160 APLGPSFPLEYID---ELARRCAGMLVLDETYAEFAES----N--ALE-LVRRHENVVVTRTLSKSYSLAGMRIGLAI-- 227 (360)
T ss_dssp TTTCCCCCHHHHH---HHHHHBSSEEEEECTTGGGSSC----C--CTH-HHHHCSSEEEEEESTTTTSCTTSCCEEEE--
T ss_pred CCCCCCcCHHHHH---HHHHHCCCEEEEECChHhhCCc----c--hhH-HhccCCCEEEEecchHhhcCCccceeeEe--
Confidence 9999999998765 5567889999999999998432 1 111 22345789999999999999999999988
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++ +++.+++...... .+++.++|.++...|++
T Consensus 228 ~~-----~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~ 259 (360)
T 3hdo_A 228 AR-----PEVIAALDKIRDH--YNLDRLAQAACVAALRD 259 (360)
T ss_dssp CC-----HHHHHHHHHHSCS--CCSCHHHHHHHHHHHHC
T ss_pred eC-----HHHHHHHHHhCCC--CCCCHHHHHHHHHHhcC
Confidence 75 5566666655543 46888999988887764
No 80
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.96 E-value=1.9e-28 Score=231.24 Aligned_cols=229 Identities=17% Similarity=0.156 Sum_probs=171.3
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
++.|+|+.|.+ +.. +.+.+.++....... .....|+. .|.++||+++++++... .+.+++|++ |+|++
T Consensus 19 ~~~i~l~~~~~-~~~----~~~~v~~a~~~~~~~-~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~--~~G~~ 86 (335)
T 1uu1_A 19 RDKTYLALNEN-PFP----FPEDLVDEVFRRLNS-DALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSV--GNGAD 86 (335)
T ss_dssp CCSEEESSCCC-SSC----CCHHHHHHHHHTCCG-GGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEE--ESSHH
T ss_pred CcceECCCCCC-CCC----CCHHHHHHHHHHhhh-hhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEE--cCChH
Confidence 46899999987 321 234455554443311 12355744 57999999999997432 233689999 99999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
+++.++. .. + ||+|+++ |+|..+...++..|++++.+|+ ++ ++++|++.+ . +..++++++||||
T Consensus 87 ~al~~~~--~~-~--gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l-----~---~~~~v~l~~p~np 150 (335)
T 1uu1_A 87 EIIYVMM--LM-F--DRSVFFP-PTYSCYRIFAKAVGAKFLEVPL-TK-DLRIPEVNV-----G---EGDVVFIPNPNNP 150 (335)
T ss_dssp HHHHHHH--HH-S--SEEEECS-SSCHHHHHHHHHHTCEEEECCC-CT-TSCCCCCCC-----C---TTEEEEEESSCTT
T ss_pred HHHHHHH--HH-h--CCcEEEC-CCcHHHHHHHHHcCCeEEEecc-CC-CCCCCHHHc-----C---CCCEEEEeCCCCC
Confidence 9998853 32 3 8999999 9999999999999999999988 43 367887776 2 2347777999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+++.+++++|+++| | ++|+||+|.+|..+. ... +....++++++.||||.+|++|+|+||++ ++
T Consensus 151 tG~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~~------~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~--~~ 217 (335)
T 1uu1_A 151 TGHVFEREEIERILKTG---A-FVALDEAYYEFHGES------YVD-FLKKYENLAVIRTFSKAFSLAAQRVGYVV--AS 217 (335)
T ss_dssp TCCCCCHHHHHHHHHTT---C-EEEEECTTHHHHCCC------CGG-GGGTCSSEEEEEESTTTTTCGGGCCEEEE--EC
T ss_pred CCCCCCHHHHHHHHHhC---C-EEEEECcchhhcchh------HHH-HhhhCCCEEEEecchhhcCCcccCeEEEE--eC
Confidence 99999999999998887 7 899999999876431 111 12334589999999999999999999988 75
Q ss_pred ChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 313 TADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
+++++++...... .+++.++|.++..+|++
T Consensus 218 -----~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~ 247 (335)
T 1uu1_A 218 -----EKFIDAYNRVRLP--FNVSYVSQMFAKVALDH 247 (335)
T ss_dssp -----HHHHHHHHHHSCT--TCSCHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHhcCC--CCcCHHHHHHHHHHhCC
Confidence 4566666655433 37888999998888764
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.95 E-value=3.7e-28 Score=237.84 Aligned_cols=232 Identities=12% Similarity=0.052 Sum_probs=167.1
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC-CCCCCCCCC-C---cHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS-RVKEYLPIV-G---LAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~-~~~~Y~p~~-G---~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
....|+|+.|.| +. .+.+.++++......... ....|++.. | .++||+++++++.......+.+++|++
T Consensus 55 ~~~~i~l~~g~~-~~----~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~- 128 (427)
T 2hox_A 55 QGCSADVASGDG-LF----LEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVF- 128 (427)
T ss_dssp TTCCEECCSCCC-GG----GHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEE-
T ss_pred CCceEEecCcCC-CC----CCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEE-
Confidence 346899999998 42 223455555444321112 123498888 9 999999999996432222234789999
Q ss_pred ecCCchhHHHHHHHHHHH--------hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 147 QCLSGTGSLRVGAEFLAR--------HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~--------~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
|+|+++++.++ +.++ +.+||.|++++|+|+.|...++..|++++.+. +|++.+++.+..
T Consensus 129 -t~G~~~al~~~--~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~~-- 195 (427)
T 2hox_A 129 -GVGVTQLIHGL--VISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWA--------GNAANYVNVSNP-- 195 (427)
T ss_dssp -ESHHHHHHHHH--HHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEE--------EEGGGGTTCSCG--
T ss_pred -eCCHHHHHHHH--HHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeeec--------CCHHHHHHhhcC--
Confidence 99999999984 4556 78999999999999999999999999987544 466677766543
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
+..++++++||||||.+++ +.+ + ++..+.|++|.+ + . .++..+. .+++|+++||||.+|
T Consensus 196 -~~k~v~l~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~----~--~--~s~~~~~--~~~~i~~~S~SK~~g 254 (427)
T 2hox_A 196 -EQYIEMVTSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW----P--H--YTPIKYK--ADEDILLFTMSKFTG 254 (427)
T ss_dssp -GGEEEEEESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS----T--T--TSCCCSC--BCCSEEEEEHHHHTS
T ss_pred -CceEEEEcCCCCCcccccH-HHH-------c--CCCEEEeecccC----C--C--CCccccC--CCceEEEEeChhcCC
Confidence 2347788999999999999 422 2 556777777642 1 0 1111121 458999999999999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhcC
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILRD 349 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~~ 349 (350)
++|+|+||++ ++++ .+++++..+......+++.+.|.++..+|++
T Consensus 255 ~~G~RiG~~~--~~~~----~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~ 299 (427)
T 2hox_A 255 HSGSRFGWAL--IKDE----SVYNNLLNYMTKNTEGTPRETQLRSLKVLKE 299 (427)
T ss_dssp CGGGCCEEEE--ECCH----HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH
T ss_pred CCCceEEEEE--ECCH----HHHHHHHHHHHhcCCCCCHHHHHHHHHHhhc
Confidence 9999999988 8654 4556666666556678999999998888763
No 82
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.94 E-value=6.6e-26 Score=220.18 Aligned_cols=228 Identities=15% Similarity=0.094 Sum_probs=178.1
Q ss_pred eEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcH---HHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 75 KLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLA---EFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 75 ~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~---~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
..++++|.| +...++...+.++++.+.+.. ....+.|++ .|.+ +||++++++. |. +++++ ++||
T Consensus 20 ~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~-~~~~~~~~l~~~ia~~~-g~-------~~~i~--~~~g 86 (404)
T 1e5e_A 20 DQFGAAIPP-IYQTSTFVFDNCQQGGNRFAG-QESGYIYTR-LGNPTVSNLEGKIAFLE-KT-------EACVA--TSSG 86 (404)
T ss_dssp CTTCCSSCC-CCCCSBCCCSSHHHHHHHHTT-SSCSCCBTT-TCCHHHHHHHHHHHHHH-TC-------SEEEE--ESSH
T ss_pred CCCCCcCCC-CcCCCccccCCHHHHHHhhcC-CcCCccccC-CcChHHHHHHHHHHHHh-CC-------CcEEE--eCCh
Confidence 356899999 788888888888777665542 223467877 6777 8999999986 43 25666 8888
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
++|+.++ +.+++.+||.|++++|+|+.+.. .++..|++++.++. + |++.+++.++++ ..+++++
T Consensus 87 ~~ai~~~--~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-~------d~~~l~~~i~~~---t~~v~l~ 154 (404)
T 1e5e_A 87 MGAIAAT--VLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINT-A------IPGEVKKHMKPN---TKIVYFE 154 (404)
T ss_dssp HHHHHHH--HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-T------STTHHHHHCCTT---EEEEEEE
T ss_pred HHHHHHH--HHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-C------CHHHHHHhcCCC---CcEEEEE
Confidence 9999884 44557899999999999999888 67889999999887 2 788899888653 4488889
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHh-cCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce-e
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRS-KGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-G 305 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~-~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G 305 (350)
+||||||.+++ +++|+++|++ +|+++|+||+|..+.+.. +. .. ...+++.|+||.|+++|+|+ |
T Consensus 155 ~p~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~------~~----~~-~~di~~~S~sK~~~~~g~ri~G 220 (404)
T 1e5e_A 155 TPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN------PV----DF-GVDVVVHSATKYINGHTDVVAG 220 (404)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC------GG----GG-TCSEEEEETTTTTTCSSCCCCE
T ss_pred CCCCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC------cc----cc-CCEEEEEcCccccCCCCCCeEE
Confidence 99999999996 7888999999 999999999999987641 11 11 46899999999999999998 9
Q ss_pred EEEEeeCChhHHHHHHH-HHHHhhccc-ccCCChhHHHHHHHHhc
Q 018820 306 ALSIVCKTADVAGRVES-QVKLVIRPM-YSNPPIHGASIVAAILR 348 (350)
Q Consensus 306 ~l~~v~~~~~~~~~~~~-~l~~~~~~~-~~~~~~~~q~i~~~~L~ 348 (350)
|++ ++ +.++. ++....... ..+++.+.|.++...|+
T Consensus 221 ~~~--~~-----~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~ 258 (404)
T 1e5e_A 221 LIC--GK-----ADLLQQIRMVGIKDITGSVISPHDAWLITRGLS 258 (404)
T ss_dssp EEE--EC-----HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHT
T ss_pred EEE--EC-----HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHh
Confidence 988 76 44555 666665544 45678888887776664
No 83
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.93 E-value=9e-25 Score=210.48 Aligned_cols=241 Identities=13% Similarity=0.052 Sum_probs=167.5
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+.+.|||+.|.+.+ ..+.+.+.++....... ......|.+..|.+++++++++++..... .+++++ |+|
T Consensus 42 g~~~idl~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~--~~g 111 (398)
T 3a2b_A 42 GRRVLMFGSNSYLG----LTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAIL--FST 111 (398)
T ss_dssp TEEEEECSCSCTTC----GGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEE--ESS
T ss_pred CceEEEeecccccC----CCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEE--ECC
Confidence 45789999997721 11234444444433211 11223466778888888888887422111 247888 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC-CcEEEEecCC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA-GAIVLLHACA 229 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~-~~~~l~~~~p 229 (350)
+++++.++ +.+.+.+||.|++++|+|+.+...++..|++++.+|. +|++.+++.+++... +..++++++|
T Consensus 112 gt~a~~~~--~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~ 182 (398)
T 3a2b_A 112 GFQSNLGP--LSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGI 182 (398)
T ss_dssp HHHHHHHH--HHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESB
T ss_pred HHHHHHHH--HHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCC
Confidence 99999884 4455789999999999999999999999999998876 589999999876321 3458888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCc-EEEEeccccccCccCcceeEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGE-CFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~-vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
|||||.+++ +++|+++|+++|+++|+||+|..+.++. ...+........++ .++++||||.++++| ||++
T Consensus 183 ~nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~ 253 (398)
T 3a2b_A 183 FSMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGH---KGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVA 253 (398)
T ss_dssp CTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG---GGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEE
T ss_pred CCCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCC---CCCchHhhcCCCcCCeEEEecccccccCCC---cEEE
Confidence 999999987 6888999999999999999999887642 11112111111235 599999999999888 9977
Q ss_pred EeeCChhHHHHHHHHHHHhh-cccccCCChhHHHH-HHHHh
Q 018820 309 IVCKTADVAGRVESQVKLVI-RPMYSNPPIHGASI-VAAIL 347 (350)
Q Consensus 309 ~v~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~i-~~~~L 347 (350)
++ +++++++.... ...+.+++...|.+ +...|
T Consensus 254 --~~-----~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l 287 (398)
T 3a2b_A 254 --GD-----ADVIDFLKHNARSVMFSASMTPASVASTLKAL 287 (398)
T ss_dssp --EC-----HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHH
T ss_pred --eC-----HHHHHHHHHhcccceecCCCCHHHHHHHHHHH
Confidence 76 45555555532 22344455555553 33444
No 84
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.91 E-value=3.2e-23 Score=198.52 Aligned_cols=236 Identities=15% Similarity=0.099 Sum_probs=160.4
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC-----CCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS-----RVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~-----~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
+...|||+.|.+.. ..+.+.+.++......... ..+.|....+..+||+++++++ |. ++.|++
T Consensus 38 g~~~id~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~------~~~i~~- 105 (384)
T 1bs0_A 38 DRQYLNFSSNDYLG----LSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL-GY------SRALLF- 105 (384)
T ss_dssp TEEEEECSCCCTTS----GGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH-TC------SEEEEE-
T ss_pred CceEEEeeccCccC----CCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh-CC------CcEEEe-
Confidence 45689999987511 1123445555444331101 1122345578899999999996 43 344554
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
++| ++++..+ +.+...+||.|++++|+|+.+...++..|++++.+|. .|++.+++.+++..++..++++
T Consensus 106 -~sG-t~a~~~~--~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~ 174 (384)
T 1bs0_A 106 -ISG-FAANQAV--IAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVT 174 (384)
T ss_dssp -SCH-HHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEE
T ss_pred -CCc-HHHHHHH--HHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEE
Confidence 554 8999874 3455789999999999999999999999999988874 4789999988765433568888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
++||||||.+++ +++|+++|+++|+++|+||+|..+.++. ........+ ..+ ..++++||||.++.+| ||
T Consensus 175 ~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~--~~~~~~~~~-~~~-~di~~~s~sK~~~~~G---G~ 244 (384)
T 1bs0_A 175 EGVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGE--QGRGSCWLQ-KVK-PELLVVTFGKGFGVSG---AA 244 (384)
T ss_dssp ESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSG--GGCCHHHHT-TCC-CSEEEEESSSTTSSCC---EE
T ss_pred eCCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecC--CCCchHHhc-CCC-CcEEEeeccchhhccC---cE
Confidence 999999999998 6788999999999999999998766431 000111222 122 2388999999999777 99
Q ss_pred EEEeeCChhHHHHHHHHHHHhhccc-c-cCCChhHHHHHHHHh
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPM-Y-SNPPIHGASIVAAIL 347 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~q~i~~~~L 347 (350)
++ ++ + ++++++....... + .+++.+.+.++...|
T Consensus 245 ~~--~~-~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al 280 (384)
T 1bs0_A 245 VL--CS-S----TVADYLLQFARHLIYSTSMPPAQAQALRASL 280 (384)
T ss_dssp EE--EC-H----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHH
T ss_pred EE--eC-H----HHHHHHHHhchhhhcCCCCCHHHHHHHHHHH
Confidence 87 75 3 4444444432111 1 246677776555444
No 85
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.91 E-value=3.8e-23 Score=199.82 Aligned_cols=228 Identities=12% Similarity=0.083 Sum_probs=167.3
Q ss_pred EEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchh
Q 018820 76 LNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYL--PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTG 153 (350)
Q Consensus 76 i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~--p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~ 153 (350)
-.+++|.| |...++...+.+.++..... ++...+.|. +..+..+|++.++++. |. + ++++ +.+|++
T Consensus 23 ~~~~~~~~-d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~la~~~-g~------~-~~i~--~~sG~~ 90 (398)
T 2rfv_A 23 STGALSTP-IFQTSTFVFDSAEQGAARFA-LEESGYIYTRLGNPTTDALEKKLAVLE-RG------E-AGLA--TASGIS 90 (398)
T ss_dssp TTCCSSCC-CCCCSBCCCSSHHHHHHHC------CCSBTTTCCHHHHHHHHHHHHHH-TC------S-EEEE--ESSHHH
T ss_pred CCCCcCCC-CcCCCccccCCHHHHHHhhc-CCCCCCceeCCCChHHHHHHHHHHHHh-CC------C-cEEE--ECCHHH
Confidence 35888988 77777888888877766322 122234454 4566788999999885 43 2 4444 666779
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 154 SLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 154 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
|+.++ +.+.+.+||.|++++|+|+.+...+ +..|++++.++. .|++.+++.++++ ..++++++|
T Consensus 91 a~~~~--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~i~~~---~~~v~~~~~ 158 (398)
T 2rfv_A 91 AITTT--LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA-------AKPEEIRAAMRPE---TKVVYIETP 158 (398)
T ss_dssp HHHHH--HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT-------TSHHHHHHHCCTT---EEEEEEESS
T ss_pred HHHHH--HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCC-------CCHHHHHHhcCCC---CeEEEEECC
Confidence 99884 4455789999999999999888776 788999998876 2889999988653 447888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALS 308 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~ 308 (350)
+||||.+++ +++|+++|+++|+++|+||+|..+.++. +. .. ...+++.|+||.++.+|+|+ ||++
T Consensus 159 ~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~------~~----~~-~~di~~~s~sK~~~~~g~~~~G~~~ 224 (398)
T 2rfv_A 159 ANPTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQQ------PL----QL-GADIVVHSVTKYINGHGDVIGGIIV 224 (398)
T ss_dssp BTTTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC------GG----GG-TCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred CCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC------ch----hh-CCcEEEEeCcccccCCCCceEEEEE
Confidence 999999996 7888999999999999999999876542 11 11 35788999999999999999 9877
Q ss_pred EeeCChhHHHHHHH-HHHHhhccc-ccCCChhHHHHHHHHhc
Q 018820 309 IVCKTADVAGRVES-QVKLVIRPM-YSNPPIHGASIVAAILR 348 (350)
Q Consensus 309 ~v~~~~~~~~~~~~-~l~~~~~~~-~~~~~~~~q~i~~~~L~ 348 (350)
++ +.+.. .++...... ..+.+.+.+.++...|+
T Consensus 225 --~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (398)
T 2rfv_A 225 --GK-----QEFIDQARFVGLKDITGGCMSPFNAWLTLRGVK 259 (398)
T ss_dssp --EC-----HHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred --EC-----HHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhh
Confidence 76 33333 344433333 34667778877766664
No 86
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.90 E-value=2.5e-23 Score=199.75 Aligned_cols=240 Identities=13% Similarity=0.043 Sum_probs=156.4
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhc--C---CCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND--R---SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTT 145 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~--~---~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~ 145 (350)
.+.+.|||+.|.|..... .+.+.++....... . .....|+...+..+||+.+++++ +. ++.|++
T Consensus 41 ~g~~~id~~~~~~~g~~~----~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-~~------~~~i~~ 109 (399)
T 3tqx_A 41 GEKEVLNFCANNYLGLAD----HPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL-GT------DDTILY 109 (399)
T ss_dssp TTEEEEECSSCCTTSCTT----CHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH-TC------SEEEEE
T ss_pred CCeeEEEeeccCcccccC----CHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH-CC------CcEEEE
Confidence 355789999996632112 33333333332211 1 11111334455799999999985 43 345554
Q ss_pred EecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC---CcE
Q 018820 146 VQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA---GAI 222 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~ 222 (350)
++ |++++.+ .+.+.+.+||.|++++|+|+.+...++..|++++.+|. .|++.+++.+++... +..
T Consensus 110 --~s-Gt~a~~~--~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~ 177 (399)
T 3tqx_A 110 --SS-CFDANGG--LFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFK 177 (399)
T ss_dssp --SC-HHHHHHT--THHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSE
T ss_pred --Cc-hHHHHHH--HHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCce
Confidence 54 5778876 34556789999999999999999999999999998876 466778877765221 456
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE 302 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~ 302 (350)
++++++||||||.+++ +++|+++|+++|+++|+||+|....++. ........+.......+++.||||.++ |.
T Consensus 178 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~di~~~s~sK~~~--g~ 250 (399)
T 3tqx_A 178 LIATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGE--NGRGTPEYCGVADRVDILTGTLGKALG--GA 250 (399)
T ss_dssp EEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSST--TSCCHHHHHTCTTCCSEEEEESSSSSC--SS
T ss_pred EEEEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCC--CCCchHHhhCCCCCCcEEEecchHhcc--cC
Confidence 8889999999999998 7889999999999999999996332332 111122222111245699999999998 45
Q ss_pred ceeEEEEeeCChhHHHHHHHHHHHhhccc-c-cCCChhHHHHHHHHh
Q 018820 303 RVGALSIVCKTADVAGRVESQVKLVIRPM-Y-SNPPIHGASIVAAIL 347 (350)
Q Consensus 303 RvG~l~~v~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~q~i~~~~L 347 (350)
+.||++ ++ +++++.+....... + .+++...+.++...+
T Consensus 251 ~gG~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (399)
T 3tqx_A 251 SGGYTS--GH-----KEIIEWLRNRSRPYLFSNTVAPVIVATSLKVL 290 (399)
T ss_dssp CCEEEE--EC-----HHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHH
T ss_pred ceEEEE--cC-----HHHHHHHHHhCcceeccCCCcHHHHHHHHHHH
Confidence 559977 76 45555555542221 2 244555544444433
No 87
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.90 E-value=1.3e-23 Score=199.78 Aligned_cols=206 Identities=12% Similarity=0.093 Sum_probs=149.0
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC-------CCCCCCCCCCCcHHHHHH-HHHHHhCCCCCCccCCcE
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-------SRVKEYLPIVGLAEFNKL-SAKLILGADSPAIRENRV 143 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-------~~~~~Y~p~~G~~~lr~a-ia~~~~g~~~~~~~~~~v 143 (350)
.++.++|..|.+ .. + +.+.+.++........ .....|.+..+..+||++ +++++ |. + +|
T Consensus 6 ~~~~i~ld~~~~-~~---~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~-~~------~-~v 72 (371)
T 2e7j_A 6 TKDFINIDPLQT-GG---K-LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL-GC------D-VA 72 (371)
T ss_dssp --CCEECCHHHH-TC---C-CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT-TS------S-EE
T ss_pred CCCcEEeccccc-CC---C-CCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc-CC------C-EE
Confidence 456889999876 21 2 2445555554433111 012235577899999999 99984 43 2 78
Q ss_pred EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEE--eecCCCCCCCHHHHHHHhhcCC--C
Q 018820 144 TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYR--YYDPATRGLNFQGLLEDLGSAP--A 219 (350)
Q Consensus 144 ~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~--~~~~~~~~~d~~~l~~~l~~~~--~ 219 (350)
++ |+|+++|+.++. .+.+.+||+|++++|+|..+...++..|++++.++ . ++ ++.+|++.+++.+++.. +
T Consensus 73 ~~--~~g~t~a~~~~~--~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~-~~~~d~~~l~~~l~~~~~~~ 146 (371)
T 2e7j_A 73 RV--TNGAREAKFAVM--HSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTD-YP-DYAITPENFAQTIEETKKRG 146 (371)
T ss_dssp EE--ESSHHHHHHHHH--HHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCC-TT-TCCCCHHHHHHHHHHHTTTS
T ss_pred EE--eCChHHHHHHHH--HHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeeccc-CC-CCCcCHHHHHHHHHhhcccC
Confidence 77 999999998854 44478999999999999999999999999999998 5 43 47899999999987321 2
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGL 299 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl 299 (350)
+..++++++||||||.+++. ++|+++|+++|+++|+||+|..+... . ....+ ...+++.||||.++.
T Consensus 147 ~~~~v~~~~~~nptG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~---~---~~~~~----~~di~~~s~sK~~~~ 213 (371)
T 2e7j_A 147 EVVLALITYPDGNYGNLPDV---KKIAKVCSEYDVPLLVNGAYAIGRMP---V---SLKEI----GADFIVGSGHKSMAA 213 (371)
T ss_dssp CEEEEEEESSCTTTCCCCCH---HHHHHHHHTTTCCEEEECTTTBTTBC---C---CHHHH----TCSEEEEEHHHHSSC
T ss_pred CeEEEEEECCCCCCcccCCH---HHHHHHHHHcCCeEEEECccccCCCC---C---Chhhc----CCCEEEecCCcCCCC
Confidence 34578899999999999985 78899999999999999999886542 1 12222 123889999999984
Q ss_pred cCcceeEEEEeeC
Q 018820 300 YGERVGALSIVCK 312 (350)
Q Consensus 300 ~G~RvG~l~~v~~ 312 (350)
+.|+||++ ++
T Consensus 214 -~~~~G~~~--~~ 223 (371)
T 2e7j_A 214 -SGPIGVMG--MK 223 (371)
T ss_dssp -CSSCEEEE--EC
T ss_pred -CCCcEEEE--Ee
Confidence 56999988 76
No 88
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.90 E-value=3.3e-23 Score=200.02 Aligned_cols=213 Identities=14% Similarity=0.078 Sum_probs=156.3
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcC----C-CCCCCCC--CCCcHHHHHHHHHHHhCCCCCCccCCcEEE
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR----S-RVKEYLP--IVGLAEFNKLSAKLILGADSPAIRENRVTT 145 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~----~-~~~~Y~p--~~G~~~lr~aia~~~~g~~~~~~~~~~v~~ 145 (350)
++.|+|+.|.+ + +.+ +.+.++........ . ..+.|++ ..|..++|+++++++ +.. . +++|++
T Consensus 27 ~~~i~l~~~~~-~----~~~-~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~-~~~-~---~~~v~~ 95 (420)
T 1t3i_A 27 HPLVYLDNAAT-S----QKP-RAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI-NAR-S---PREIVY 95 (420)
T ss_dssp EECEECBTTTC-C----CCC-HHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT-TCS-C---GGGEEE
T ss_pred CceEEecCCcc-C----CCC-HHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc-CCC-C---CCeEEE
Confidence 35899999988 3 222 33444433332111 1 1234654 478899999999985 431 1 578999
Q ss_pred EecCCchhHHHHHHHHHHH----hcCCCEEEEcCCCCCC----hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 146 VQCLSGTGSLRVGAEFLAR----HYHQRTIYIPQPTWGN----HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~----~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
|+|+++|+.++. .+. +.+||+|++++|+|.. +..+++..|++++.++. + +++.+|++.+++.++++
T Consensus 96 --~~g~t~a~~~~~--~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~l~~~ 169 (420)
T 1t3i_A 96 --TRNATEAINLVA--YSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL-D-EQESFDLEHFKTLLSEK 169 (420)
T ss_dssp --ESSHHHHHHHHH--HHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB-C-TTSSBCHHHHHHHCCTT
T ss_pred --cCChHHHHHHHH--HHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEecc-C-CCCCcCHHHHHHhhCCC
Confidence 999999998854 444 6799999999999998 56677788999999998 5 34679999999988653
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccccc
Q 018820 218 PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNL 297 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 297 (350)
..++++++|+||||.+++ +++|.++|+++|+++|+|++|...... . ....+ ...+++.||||.+
T Consensus 170 ---~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~---~~~~~----~~di~~~s~sK~~ 233 (420)
T 1t3i_A 170 ---TKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP---L---DVQLI----DCDWLVASGHKMC 233 (420)
T ss_dssp ---EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---C---CHHHH----TCSEEEEEGGGTT
T ss_pred ---ceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc---C---chhhc----CCCEEEEehhhhc
Confidence 447888999999999998 688899999999999999999865432 1 11111 2568899999999
Q ss_pred CccCcceeEEEEeeCChhHHHHHHHHHHHh
Q 018820 298 GLYGERVGALSIVCKTADVAGRVESQVKLV 327 (350)
Q Consensus 298 gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~ 327 (350)
|.+| +||++ ++ +++.+++...
T Consensus 234 ~~~g--~G~~~--~~-----~~~~~~~~~~ 254 (420)
T 1t3i_A 234 APTG--IGFLY--GK-----EEILEAMPPF 254 (420)
T ss_dssp SCTT--CEEEE--EC-----HHHHHHSCCC
T ss_pred CCCc--eEEEE--Ec-----hHHHhhcCce
Confidence 8778 99988 76 4555555443
No 89
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.90 E-value=2.5e-23 Score=201.95 Aligned_cols=249 Identities=12% Similarity=0.095 Sum_probs=164.9
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS-RVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~-~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+...+||+.|.....-|. +.+.+.++......... ....|.+..|..+||+++++++.+ + . +++|++ |+|
T Consensus 40 g~~~id~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~-~---~~~v~~--~~g 110 (426)
T 1sff_A 40 GREYLDFAGGIAVLNTGH--LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPG-D-F---AKKTLL--VTT 110 (426)
T ss_dssp CCEEEESSHHHHTCTTCB--TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSC-S-S---CEEEEE--ESS
T ss_pred CCEEEEcccChhhcccCC--CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCc-c-c---ccEEEE--eCc
Confidence 456899998874212232 23445555444431111 112467788999999999999633 1 1 578998 999
Q ss_pred chhHHHHHHHHH-HHhcCCCEEEEcCCCCCChH-HHHHHcCCe-------------EEEEEeecC----CCCCCCHHHHH
Q 018820 151 GTGSLRVGAEFL-ARHYHQRTIYIPQPTWGNHP-KVFTLAGLS-------------VKSYRYYDP----ATRGLNFQGLL 211 (350)
Q Consensus 151 ~~~al~l~~~l~-~~~~~gd~Vlv~~P~y~~~~-~~~~~~G~~-------------~~~v~~~~~----~~~~~d~~~l~ 211 (350)
+++|+.++..+. +...+| .|++++|+|..+. ..+...|.+ ++.+|+ +. .++.+|++.++
T Consensus 111 ~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~-~~~~~~~~~~~d~~~l~ 188 (426)
T 1sff_A 111 GSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALY-PCPLHGISEDDAIASIH 188 (426)
T ss_dssp HHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECC-CBGGGTBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCC-CccccccchHHHHHHHH
Confidence 999998864421 334565 8999999998765 456666653 666776 21 12346899999
Q ss_pred HHhhcC---CCCcEEEEecCCCCCCC-CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE
Q 018820 212 EDLGSA---PAGAIVLLHACAHNPTG-VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 212 ~~l~~~---~~~~~~l~~~~p~NPTG-~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
+.+++. .+..++++.++++| || .+++++++++|+++|++||+++|+||+|.+|.+.+ .. ...... ...
T Consensus 189 ~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g--~~-~~~~~~----~~~ 260 (426)
T 1sff_A 189 RIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTG--TL-FAMEQM----GVA 260 (426)
T ss_dssp HHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-SGGGGT----TSC
T ss_pred HHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCccc--ch-hhhhhc----CCC
Confidence 888641 12234444467889 99 88999999999999999999999999999987543 11 111111 112
Q ss_pred EEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+.+.||||.++. |+|+||++ ++ +++++.+.........+++.++|.++...|
T Consensus 261 ~di~s~sK~~~~-GlriG~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~aal 312 (426)
T 1sff_A 261 PDLTTFAKSIAG-GFPLAGVT--GR-----AEVMDAVAPGGLGGTYAGNPIACVAALEVL 312 (426)
T ss_dssp CSEEEECGGGGT-SSCCEEEE--EE-----HHHHTTSCTTSBCCSSSSCHHHHHHHHHHH
T ss_pred CCEEEEcccccC-CCceEEEE--Ec-----HHHHhhhccCCcCcCCCCCHHHHHHHHHHH
Confidence 334499999996 99999988 77 455555543323333456778887777444
No 90
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.90 E-value=7.3e-23 Score=195.26 Aligned_cols=241 Identities=13% Similarity=0.080 Sum_probs=161.4
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+...+||+.|.+...-| .+.+.+.++........ .....| +..+..+|++++++++ |. +++|++ |+
T Consensus 26 ~g~~~ld~~~~~~~~~~g--~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~-g~------~~~v~~--~~ 93 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLG--HAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF-WT------EGKVFF--AN 93 (375)
T ss_dssp TCCEEEESSHHHHTCTTC--BSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS-SS------CEEEEE--ES
T ss_pred CCCEEEEcCCcccccccC--CCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc-CC------CCeEEE--eC
Confidence 345689999998722222 12445555544433211 122357 5668899999999984 43 368888 99
Q ss_pred CchhHHHHHHHHH-HHh---cCC-CEEEEcCCCCCChHHHHHHcCCe-------------EEEEEeecCCCCCCCHHHHH
Q 018820 150 SGTGSLRVGAEFL-ARH---YHQ-RTIYIPQPTWGNHPKVFTLAGLS-------------VKSYRYYDPATRGLNFQGLL 211 (350)
Q Consensus 150 G~~~al~l~~~l~-~~~---~~g-d~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~~d~~~l~ 211 (350)
|+++++.++.... ... .+| |+|++++|+|..+...+...+.. +..++. .|++.++
T Consensus 94 g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 166 (375)
T 2eh6_A 94 SGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVY 166 (375)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHH
T ss_pred chHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHH
Confidence 9999998864332 124 678 99999999999987765544322 233322 5888888
Q ss_pred HHhhcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEE
Q 018820 212 EDLGSAPAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIA 290 (350)
Q Consensus 212 ~~l~~~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 290 (350)
+.+++ +..+++++++|||||.+ .+.+++++|+++|+++|+++|+||+|.+|...+ .. .....+ ....+++
T Consensus 167 ~~l~~---~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~-~~~~~~-~~~~d~~-- 237 (375)
T 2eh6_A 167 KLLDE---ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG--EF-YAYQHF-NLKPDVI-- 237 (375)
T ss_dssp TTCCT---TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-SGGGGG-TCCCSEE--
T ss_pred HHhcC---CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC--cc-hhhhhc-CCCCCEE--
Confidence 87764 34477778899999999 679999999999999999999999999876432 11 112222 1113444
Q ss_pred eccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 291 QSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 291 ~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
||||.++ +|+|+||++ ++ +++.+++.........+.+.+.+.++...|+
T Consensus 238 -s~SK~~~-~g~~~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (375)
T 2eh6_A 238 -ALAKGLG-GGVPIGAIL--AR-----EEVAQSFTPGSHGSTFGGNPLACRAGTVVVD 286 (375)
T ss_dssp -EECGGGG-TTSCCEEEE--EE-----HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHH
T ss_pred -EEccccc-CCCCeEEEE--Ec-----HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 8899999 799999988 76 4455544442222233457777777666554
No 91
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.89 E-value=3.8e-22 Score=191.51 Aligned_cols=213 Identities=15% Similarity=0.114 Sum_probs=153.5
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKE------YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~------Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
++.++|..+.+ + +.+.+++++..+.+.......+. |.+..+..+||+++++++ +.. . +++|++
T Consensus 22 ~~~i~l~~~~~-~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-~~~-~---~~~v~~- 90 (406)
T 1kmj_A 22 LPLAYLDSAAS-A----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI-NAR-S---AEELVF- 90 (406)
T ss_dssp EECEECCTTTC-C----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT-TCS-C---GGGEEE-
T ss_pred CceEEecCCcc-C----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc-CCC-C---CCeEEE-
Confidence 45899999988 3 22233333333333311111111 235677899999999985 431 1 578999
Q ss_pred ecCCchhHHHHHHHHHHH----hcCCCEEEEcCCCCCCh----HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 147 QCLSGTGSLRVGAEFLAR----HYHQRTIYIPQPTWGNH----PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~----~~~gd~Vlv~~P~y~~~----~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
|+|+++|+.++. .+. +.+||+|++++|+|... ..+++..|++++.+|. ++ ++.+|++.+++.+.++
T Consensus 91 -~~g~t~a~~~~~--~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~-~~~~d~~~l~~~l~~~- 164 (406)
T 1kmj_A 91 -VRGTTEGINLVA--NSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPL-NP-DGTLQLETLPTLFDEK- 164 (406)
T ss_dssp -ESSHHHHHHHHH--HHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECB-CT-TSCBCGGGHHHHCCTT-
T ss_pred -eCChhHHHHHHH--HHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEec-CC-CCCcCHHHHHHHhccC-
Confidence 999999998854 444 67999999999998654 3456778999999988 43 4678999999998653
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccC
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLG 298 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g 298 (350)
..++++++|+||||.+++ +++|+++|+++|+++|+||+|...... -+ .... ...+++.||||.+|
T Consensus 165 --~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~~---~~---~~~~----~~d~~~~s~~K~~g 229 (406)
T 1kmj_A 165 --TRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHHP---VD---VQAL----DCDFYVFSGHKLYG 229 (406)
T ss_dssp --EEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---CC---HHHH----TCSEEEEEGGGTTS
T ss_pred --CeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCCC---Cc---cccc----CCCEEEEEchhccC
Confidence 447888999999999999 788899999999999999999865421 11 1111 35688999999999
Q ss_pred ccCcceeEEEEeeCChhHHHHHHHHHHH
Q 018820 299 LYGERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 299 l~G~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
.+| +||++ ++ +++.+++..
T Consensus 230 ~~G--~G~~~--~~-----~~~~~~~~~ 248 (406)
T 1kmj_A 230 PTG--IGILY--VK-----EALLQEMPP 248 (406)
T ss_dssp CTT--CEEEE--EC-----HHHHHHCCC
T ss_pred CCC--cEEEE--Ee-----HHHHhhcCC
Confidence 888 89988 76 455555543
No 92
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.88 E-value=1.9e-22 Score=193.49 Aligned_cols=200 Identities=16% Similarity=0.151 Sum_probs=147.9
Q ss_pred CCCCCCCcHHHHHHHHHHH---hCCCCCCccCC-cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC--hHHHH
Q 018820 112 EYLPIVGLAEFNKLSAKLI---LGADSPAIREN-RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN--HPKVF 185 (350)
Q Consensus 112 ~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~-~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~ 185 (350)
.|++. ..++++++++++ +|.+ ++ +|++ |+|+++|+.++ +.+.+.+||+|++++|+|.. +...+
T Consensus 60 ~~~~~--~~~~~~~~~~~la~~~g~~-----~~~~v~~--t~g~t~al~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~ 128 (393)
T 1vjo_A 60 HLDPA--FLALMDEIQSLLRYVWQTE-----NPLTIAV--SGTGTAAMEAT--IANAVEPGDVVLIGVAGYFGNRLVDMA 128 (393)
T ss_dssp TTSHH--HHHHHHHHHHHHHHHHTCC-----CSCEEEE--SSCHHHHHHHH--HHHHCCTTCEEEEEESSHHHHHHHHHH
T ss_pred ccCHH--HHHHHHHHHHHHHHHhCCC-----CCcEEEE--eCchHHHHHHH--HHhccCCCCEEEEEcCChhHHHHHHHH
Confidence 46442 456666666652 4542 56 8998 99999999884 34457899999999999998 88889
Q ss_pred HHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 186 TLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 186 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
+..|++++.+|. ++ ++.+|++.+++.+++ +++ ++++++|+||||.+.+ +++|+++|+++|+++|+||+|.
T Consensus 129 ~~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~~~~~---~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~- 199 (393)
T 1vjo_A 129 GRYGADVRTISK-PW-GEVFSLEELRTALETHRPA---ILALVHAETSTGARQP---LEGVGELCREFGTLLLVDTVTS- 199 (393)
T ss_dssp HHTTCEEEEEEC-CT-TCCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTT-
T ss_pred HHcCCceEEEec-CC-CCCCCHHHHHHHHhhCCce---EEEEeccCCCcceecc---HHHHHHHHHHcCCEEEEECCcc-
Confidence 999999999998 54 457999999999976 444 7788999999999987 6788999999999999999998
Q ss_pred CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh----h------------
Q 018820 265 FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV----I------------ 328 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~----~------------ 328 (350)
+. ....+ + ......+++.|+||.++.+| |+||++ ++ +++.+++... .
T Consensus 200 ~g--~~~~~------~-~~~~~di~~~s~sK~l~~~~-~~G~l~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (393)
T 1vjo_A 200 LG--GVPIF------L-DAWGVDLAYSCSQKGLGCSP-GASPFT--MS-----SRAIEKLQRRRTKVANWYLDMNLLGKY 262 (393)
T ss_dssp TT--TSCCC------T-TTTTCSEEECCSSSTTCSCS-SCEEEE--EC-----HHHHHHHHTCSSCCSCSTTCHHHHHHH
T ss_pred cc--CcCCc------c-cccCccEEEEcCcccccCCC-ceEEEE--EC-----HHHHHHHhccCCCCCceecCcHhhhhh
Confidence 32 11011 1 11235688999999999788 999988 76 4555555321 0
Q ss_pred ----cccccCCChhHHHHHHHHhc
Q 018820 329 ----RPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 329 ----~~~~~~~~~~~q~i~~~~L~ 348 (350)
+..+.+++.+.+.++...|+
T Consensus 263 ~~~~~~~~g~~~~~~~~a~~~al~ 286 (393)
T 1vjo_A 263 WGSERVYHHTAPINLYYALREALR 286 (393)
T ss_dssp HSTTCCCCSCCCHHHHHHHHHHHH
T ss_pred hccCCCCCCCCCHHHHHHHHHHHH
Confidence 11222677777777666553
No 93
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.88 E-value=4.1e-22 Score=191.86 Aligned_cols=239 Identities=15% Similarity=0.094 Sum_probs=158.5
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhc-CCC--CCCCC--CCCCcHHHHHHHHHHHhCCCCCCccCCcEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-RSR--VKEYL--PIVGLAEFNKLSAKLILGADSPAIRENRVTT 145 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-~~~--~~~Y~--p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~ 145 (350)
.+...|||+.|.|. | +...+.+.++....... ... ...|. ...+..+||+++++++ |. ++.|++
T Consensus 43 ~g~~~id~~~~~~~---g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~------~~~i~~ 111 (401)
T 1fc4_A 43 DGSHVINFCANNYL---G-LANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL-GM------EDAILY 111 (401)
T ss_dssp TSCEEEECCCSCTT---S-CTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH-TC------SEEEEE
T ss_pred CCccEEEeeccCcc---c-ccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh-CC------CcEEEe
Confidence 35678999999662 1 11133444443333211 110 11232 2567899999999996 43 245544
Q ss_pred EecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC---CcE
Q 018820 146 VQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA---GAI 222 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~ 222 (350)
++ |++++..+ +.+...+||.|++++|+|+.+...++..|++++.++. .|++.+++.+++... +..
T Consensus 112 --~s-Gs~a~~~~--~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~ 179 (401)
T 1fc4_A 112 --SS-CFDANGGL--FETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHV 179 (401)
T ss_dssp --SC-HHHHHHTT--HHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSE
T ss_pred --CC-hHHHHHHH--HHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCce
Confidence 55 57788773 4455789999999999998888888999999988764 478889888865211 344
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHHHHHhhcCCcEEEEecccccc-Ccc
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSVRMFVADGGECFIAQSYAKNL-GLY 300 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-gl~ 300 (350)
++++++||||||.+++ +++|+++|+++|+++|+||+|. ++.+.+. .. ....+.-.....+++.||||.+ +.+
T Consensus 180 ~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g-~~--~~~~~~~~~~~di~~~s~sK~~~~~~ 253 (401)
T 1fc4_A 180 LIATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENG-RG--SHEYCDVMGRVDIITGTLGKALGGAS 253 (401)
T ss_dssp EEEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTS-CC--HHHHTTCTTCCSEEEEESSSTTCSSS
T ss_pred EEEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCC-Cc--cHHHcCCCcCCcEEEecchhhccCCC
Confidence 7888999999999998 7888999999999999999995 8863211 11 1111211123579999999999 655
Q ss_pred CcceeEEEEeeCChhHHHHHHHHHHHhhcc--cccCCChhHHHHHHHHhc
Q 018820 301 GERVGALSIVCKTADVAGRVESQVKLVIRP--MYSNPPIHGASIVAAILR 348 (350)
Q Consensus 301 G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~q~i~~~~L~ 348 (350)
| ||++ ++ +++++.+...... ...+++.+.+.++...|+
T Consensus 254 g---G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~ 293 (401)
T 1fc4_A 254 G---GYTA--AR-----KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLE 293 (401)
T ss_dssp C---EEEE--EC-----HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred C---EEEE--cC-----HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHH
Confidence 5 9987 75 3445555443321 133667777777765553
No 94
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.88 E-value=7.6e-22 Score=190.17 Aligned_cols=239 Identities=13% Similarity=0.111 Sum_probs=158.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDR-SRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~-~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+...+|++.|.+...-|. ..+.+.++........ .....| +.....++++.++++. + .++|++ |+
T Consensus 37 ~g~~~lD~~~~~~~~~lg~--~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-~-------~~~v~~--~~ 103 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGH--AHPELREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT-F-------ADRVFF--CN 103 (406)
T ss_dssp TCCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCSCCCTTS-CCHHHHHHHHHHHHHS-S-------CSEEEE--ES
T ss_pred CCCEEEECCCchhhcccCC--CCHHHHHHHHHHHHhcccccCCc-CCHHHHHHHHHHHhhC-C-------CCeEEE--eC
Confidence 3556899999843222222 2344445444433111 111223 3344567777777763 3 358888 99
Q ss_pred CchhHHHHHHHHHHHh-----cCC-CEEEEcCCCCCChHHHHHHcCC-------------eEEEEEeecCCCCCCCHHHH
Q 018820 150 SGTGSLRVGAEFLARH-----YHQ-RTIYIPQPTWGNHPKVFTLAGL-------------SVKSYRYYDPATRGLNFQGL 210 (350)
Q Consensus 150 G~~~al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l 210 (350)
|+++|+.++...+... .+| |.|++++|+|..+.......+. ++..+|+ .|++.+
T Consensus 104 gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 176 (406)
T 4adb_A 104 SGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSA 176 (406)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHH
Confidence 9999998854332111 055 9999999999998655544443 3444433 478888
Q ss_pred HHHhhcCCCCcEEEEecCCCCCCCCCC--CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 211 LEDLGSAPAGAIVLLHACAHNPTGVDP--TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 211 ~~~l~~~~~~~~~l~~~~p~NPTG~~~--s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
++.++. +..+++++ |+||||.++ +.+++++|+++|++||+++|+||+|.+|.+.+ .. .....+ ....+++
T Consensus 177 ~~~l~~---~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g--~~-~~~~~~-~~~~d~~ 248 (406)
T 4adb_A 177 SALIDD---STCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG--EL-YAYMHY-GVTPDLL 248 (406)
T ss_dssp HTTCST---TEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS--SS-SHHHHH-TCCCSEE
T ss_pred HHHhcC---CeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc--hh-HHHHhc-CCCCCEE
Confidence 887753 34466666 999999998 99999999999999999999999999887643 11 122222 2233555
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+|||.++ +|+|+||++ ++ +++.+.+.........+++.+.+.++...|+
T Consensus 249 ---t~sK~~~-~G~r~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 297 (406)
T 4adb_A 249 ---TTAKALG-GGFPVGALL--AT-----EECARVMTVGTHGTTYGGNPLASAVAGKVLE 297 (406)
T ss_dssp ---EECGGGG-TTSCCEEEE--EC-----HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred ---Eechhhc-CCCCeEEEE--Ec-----HHHHhhhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 6799999 999999977 76 5676666655555555778888888776654
No 95
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.88 E-value=7.3e-22 Score=193.73 Aligned_cols=221 Identities=10% Similarity=0.064 Sum_probs=155.7
Q ss_pred CCCCeEEeecccc-cCCCCCc---cccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 71 PSPVKLNLGVGAY-RTEEGKP---LVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~-~~~~~~p---~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
.+.+.++|+.|.+ .|...+. .+.+.+.+ .+. .. ...|.+..|..+||+++++++ +. +++++
T Consensus 31 ~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~---a~~--~~-~~~y~~~~~~~~l~~~la~~~-~~-------~~~~~- 95 (456)
T 2ez2_A 31 AGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWA---GMM--MG-DEAYAGSENFYHLERTVQELF-GF-------KHIVP- 95 (456)
T ss_dssp TTTCGGGSCGGGCSEECSCSSSCCCCCHHHHH---HHT--TC-CCCSSSCHHHHHHHHHHHHHH-CC-------SEEEE-
T ss_pred CCCCcccCCcccceeeeccccCCccCCHHHHH---Hhh--cc-hhhcccChhHHHHHHHHHHHh-CC-------CcEEE-
Confidence 4566788888853 2322211 22333333 333 12 235888889999999999986 42 36777
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCC-CChHHHHHHcCCeEEEEEeecC----C-----CCCCCHHHHHHHhhc
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTW-GNHPKVFTLAGLSVKSYRYYDP----A-----TRGLNFQGLLEDLGS 216 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y-~~~~~~~~~~G~~~~~v~~~~~----~-----~~~~d~~~l~~~l~~ 216 (350)
|+||++|+.++ +.+.+.+|| +++.|+| ..|...++..|++++.+++ ++ + ++.+|++.+++.+++
T Consensus 96 -~~~gt~a~~~a--l~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~-~~~~~~~~~~~~~~~~d~~~l~~~i~~ 169 (456)
T 2ez2_A 96 -THQGRGAENLL--SQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVR-DEAHDAGLNIAFKGDIDLKKLQKLIDE 169 (456)
T ss_dssp -ESSHHHHHHHH--HHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBC-GGGGCTTCCCSCTTCBCHHHHHHHHHH
T ss_pred -eCCcHHHHHHH--HHHhCCCCC--EeccccccchhHHHHHHcCCEEEEecc-cccccccccccccCCCCHHHHHHHHHh
Confidence 99999999884 344578999 7889999 7778889999999999988 42 2 367899999999876
Q ss_pred CC-CCcEEEEecCCCC-CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC----------CCCCCCCCchHHHH-HHhhc
Q 018820 217 AP-AGAIVLLHACAHN-PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG----------FASGSLDSDAQSVR-MFVAD 283 (350)
Q Consensus 217 ~~-~~~~~l~~~~p~N-PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~----------~~~~~~~~~~~~~~-~~~~~ 283 (350)
++ ....++++++||| |||.+++.+++++|+++|++||+++|+||+|.. +.+.+ ....++. .+ ..
T Consensus 170 ~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~-~~ 246 (456)
T 2ez2_A 170 KGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFEN--KSIAEIVHEM-FS 246 (456)
T ss_dssp HCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTT--SCHHHHHHHH-HT
T ss_pred ccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCC--cchhhhhhhh-cc
Confidence 44 2235788899999 999999999999999999999999999999975 44443 2211111 11 12
Q ss_pred CCcEEEEeccccccCccCcceeEEEEeeCChhHHHHH
Q 018820 284 GGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 284 ~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~ 320 (350)
..+++++ |++|.++ +| |.||++ +.+++..+.+
T Consensus 247 ~~d~~~~-S~kk~~~-~~-~gG~~~--~~~~~~~~~~ 278 (456)
T 2ez2_A 247 YADGCTM-SGKKDCL-VN-IGGFLC--MNDDEMFSSA 278 (456)
T ss_dssp TCSEEEE-ETTTTTC-CS-SCEEEE--ESCHHHHHHH
T ss_pred cCCEEEE-eCcccCC-CC-ceeEEE--ECCHHHHHHH
Confidence 2356665 7888655 78 899987 7555444433
No 96
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.88 E-value=7.8e-22 Score=188.28 Aligned_cols=203 Identities=15% Similarity=0.126 Sum_probs=146.7
Q ss_pred CCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC--hHHHHH
Q 018820 112 EYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN--HPKVFT 186 (350)
Q Consensus 112 ~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~~ 186 (350)
.|++. ..+++++++++ ++|.+ . ++++++ |+|+++|+.++ +.+++.+||+|++++|+|.. +...++
T Consensus 46 ~~~~~--~~~~~~~~~~~la~~~g~~-~---~~~v~~--~~g~t~a~~~~--~~~l~~~gd~vl~~~~~~~~~~~~~~~~ 115 (386)
T 2dr1_A 46 HRSKE--YRKVHMDTVERLREFLEVE-K---GEVLLV--PSSGTGIMEAS--IRNGVSKGGKVLVTIIGAFGKRYKEVVE 115 (386)
T ss_dssp TTSHH--HHHHHHHHHHHHHHHHTCS-S---SEEEEE--SSCHHHHHHHH--HHHHSCTTCEEEEEESSHHHHHHHHHHH
T ss_pred ccCHH--HHHHHHHHHHHHHHHhCCC-C---CcEEEE--eCChHHHHHHH--HHHhhcCCCeEEEEcCCchhHHHHHHHH
Confidence 46442 25666666666 34543 2 467888 99999999984 34457899999999999987 888889
Q ss_pred HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 187 LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 187 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
..|++++.++. ++ ++.+|++.+++.+++.++ ..++++++|+||||.+.+ +++|+++|+++|+++|+||+|..+.
T Consensus 116 ~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~~~~-~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~ 189 (386)
T 2dr1_A 116 SNGRKAVVLEY-EP-GKAVKPEDLDDALRKNPD-VEAVTITYNETSTGVLNP---LPELAKVAKEHDKLVFVDAVSAMGG 189 (386)
T ss_dssp HTTCEEEEEEC-CT-TCCCCHHHHHHHHHHCTT-CCEEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTBTT
T ss_pred HhCCceEEEec-CC-CCCCCHHHHHHHHhcCCC-CcEEEEEeecCCcchhCC---HHHHHHHHHHcCCeEEEEccccccC
Confidence 99999999998 54 467999999999954222 236777899999999986 6888999999999999999998765
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHH----------------HHh--h
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQV----------------KLV--I 328 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l----------------~~~--~ 328 (350)
.. . . + ......+++.||||.++.++ ++||++ ++ +++.+.+ ... .
T Consensus 190 ~~---~---~---~-~~~~~di~~~s~sK~~~~~~-g~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (386)
T 2dr1_A 190 AD---I---K---F-DKWGLDVVFSSSQKAFGVPP-GLAIGA--FS-----ERFLEIAEKMPERGWYFDIPLYVKYLKEK 251 (386)
T ss_dssp BC---C---C---T-TTTTCSEEEEETTSTTCCCS-SCEEEE--EC-----HHHHHHHTTCTTCCSTTCHHHHHHHHHHH
T ss_pred cc---c---c---c-cccCCcEEEEeccccccCCC-ceEEEE--EC-----HHHHHHHhcCCCCceEEeHHHHHHhhccC
Confidence 42 1 1 1 11135789999999998653 499988 76 3333333 222 1
Q ss_pred cccccCCChhHHHHHHHHhc
Q 018820 329 RPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 329 ~~~~~~~~~~~q~i~~~~L~ 348 (350)
+....+++.+.|.++...|+
T Consensus 252 ~~~~~~~~~~~~~a~~~~l~ 271 (386)
T 2dr1_A 252 ESTPSTPPMPQVFGINVALR 271 (386)
T ss_dssp SSCSSCCCHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHH
Confidence 23345677778877766553
No 97
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.88 E-value=3.8e-22 Score=188.31 Aligned_cols=202 Identities=15% Similarity=0.132 Sum_probs=141.9
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.+.|+|+.+.+ . .+.+.++++..... .. ...|.+..+..+||+++++++ |. +++++ +.||+
T Consensus 3 ~~~i~~~~~~~-~-----~p~~~~~~a~~~~~--~~-~~~y~~~~~~~~l~~~la~~~-g~-------~~~~~--~~~gt 63 (347)
T 1jg8_A 3 HMMIDLRSDTV-T-----KPTEEMRKAMAQAE--VG-DDVYGEDPTINELERLAAETF-GK-------EAALF--VPSGT 63 (347)
T ss_dssp --CEECSCGGG-C-----CCCHHHHHHHHTCC--CC-CGGGTCCHHHHHHHHHHHHHH-TC-------SEEEE--ESCHH
T ss_pred ceEEEeccccC-C-----CCCHHHHHHHhcCC--CC-CcccCCChHHHHHHHHHHHHh-CC-------ceEEE--ecCcH
Confidence 45789999988 2 23566666655432 11 235888889999999999985 43 24555 78888
Q ss_pred hHHHHHHHHHHHhcCCCEEEEcCCCCCC-hH--HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEe
Q 018820 153 GSLRVGAEFLARHYHQRTIYIPQPTWGN-HP--KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLH 226 (350)
Q Consensus 153 ~al~l~~~l~~~~~~gd~Vlv~~P~y~~-~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~ 226 (350)
+++.++ +.+.+.+||+|++++|+|.. |. .+++..|++++.+ . ++ ++.+|++.+++.+++. .++..++++
T Consensus 64 ~a~~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~-~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~ 138 (347)
T 1jg8_A 64 MGNQVS--IMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-P-GK-NGAMDPDDVRKAIRPRNIHFPRTSLIAI 138 (347)
T ss_dssp HHHHHH--HHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-C-EE-TTEECHHHHHHHSCCSCTTSCCEEEEEE
T ss_pred HHHHHH--HHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-c-CC-CCccCHHHHHHHhccccccccCceEEEE
Confidence 888763 45557899999999999854 32 3567789999888 4 33 3558999999988652 123567888
Q ss_pred cCCCCCC-CCCCCHHHHHHHHHHHHhcCcEEEEccCCCCC--CCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcc
Q 018820 227 ACAHNPT-GVDPTLQQWERIRQLMRSKGLLPFFDSAYQGF--ASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGER 303 (350)
Q Consensus 227 ~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~--~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R 303 (350)
++||||| |.+++.+++++|+++|+++|+++|+|++|..+ .+.+ .+ ...+....+ .+ +.||||.++++
T Consensus 139 ~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~--~~---~~~~~~~~d-~~-~~s~sK~l~~~--- 208 (347)
T 1jg8_A 139 ENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASG--VP---VKEYAGYAD-SV-MFCLSKGLCAP--- 208 (347)
T ss_dssp ESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHC--CC---HHHHHHTCS-EE-EEESSSTTCCS---
T ss_pred eccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcC--CC---hHHhccccc-EE-EEecccccCCC---
Confidence 9999999 99999999999999999999999999987421 1111 11 122222223 33 34899998743
Q ss_pred eeEEE
Q 018820 304 VGALS 308 (350)
Q Consensus 304 vG~l~ 308 (350)
+||++
T Consensus 209 ~G~~~ 213 (347)
T 1jg8_A 209 VGSVV 213 (347)
T ss_dssp SCEEE
T ss_pred ceEEE
Confidence 78644
No 98
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.88 E-value=2.4e-21 Score=186.71 Aligned_cols=174 Identities=13% Similarity=0.035 Sum_probs=128.5
Q ss_pred CCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCe
Q 018820 112 EYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLS 191 (350)
Q Consensus 112 ~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 191 (350)
.|....+..+||+++++++ +. +++|++ ++|++ ++..+..++....+||.|+++.|+|+.+...++..|++
T Consensus 86 ~~~~~~~~~~l~~~la~~~-~~------~~~i~~--~sG~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~ 155 (401)
T 2bwn_A 86 ISGTTAYHRRLEAEIAGLH-QK------EAALVF--SSAYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGP 155 (401)
T ss_dssp TBCCBHHHHHHHHHHHHHT-TC------SEEEEE--SCHHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCC
T ss_pred ccCChHHHHHHHHHHHHHh-CC------CcEEEE--CCcHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCe
Confidence 3556678999999999985 42 467776 77766 55543222222458999999999999999999999999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAP-AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
++.+|. + |++.+++.++... .+..++++++|+||||.+++ +++|+++|+++|+++|+||+|....++.
T Consensus 156 ~~~v~~-~------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~- 224 (401)
T 2bwn_A 156 KRIFRH-N------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGP- 224 (401)
T ss_dssp EEEECT-T------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSST-
T ss_pred EEEEcC-C------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCC-
Confidence 999886 2 7888888887432 24458889999999999998 6788999999999999999999544431
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
..........-.....++++||||.||++| ||++ ++
T Consensus 225 -~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~--~~ 260 (401)
T 2bwn_A 225 -RGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIA--AS 260 (401)
T ss_dssp -TSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEE--EC
T ss_pred -CCceeeeccCccccCcEEEeechhhccCCC---CEEe--cC
Confidence 111111111101124788999999999988 9977 65
No 99
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.87 E-value=3e-22 Score=190.85 Aligned_cols=199 Identities=16% Similarity=0.136 Sum_probs=144.4
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh----cCCCEEEEcCCCCCChHHHH---HH
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH----YHQRTIYIPQPTWGNHPKVF---TL 187 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~----~~gd~Vlv~~P~y~~~~~~~---~~ 187 (350)
+..|..+||+++++++ |.+ +++|++ |+|+++++.++.. +.. .+||+|++++|+|+.+...+ +.
T Consensus 42 ~~~~~~~l~~~la~~~-g~~-----~~~v~~--~~g~t~a~~~~~~--~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~ 111 (384)
T 1eg5_A 42 ANLHMEKAREKVAKVL-GVS-----PSEIFF--TSCATESINWILK--TVAETFEKRKRTIITTPIEHKAVLETMKYLSM 111 (384)
T ss_dssp HHHHHHHHHHHHHHHH-TSC-----GGGEEE--ESCHHHHHHHHHH--HHHHHTTTTCCEEEECTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHc-CCC-----CCeEEE--ECCHHHHHHHHHH--hhhhhccCCCCEEEECCCCchHHHHHHHHHHh
Confidence 4567799999999986 432 578998 9999999988543 334 68999999999999886655 67
Q ss_pred cCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcC--cEEEEccCCCCC
Q 018820 188 AGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKG--LLPFFDSAYQGF 265 (350)
Q Consensus 188 ~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~--~~ii~DeaY~~~ 265 (350)
.|++++.+|. ++ ++.+|++.+++.++++ ..++++++|+||||.+++ +++|.++|+++| +++|+||+|. |
T Consensus 112 ~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~-~ 182 (384)
T 1eg5_A 112 KGFKVKYVPV-DS-RGVVKLEELEKLVDED---TFLVSIMAANNEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQT-I 182 (384)
T ss_dssp TTCEEEECCB-CT-TSCBCHHHHHHHCCTT---EEEEEEESBCTTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTT-T
T ss_pred cCCEEEEEcc-CC-CCccCHHHHHHHhCCC---CeEEEEECCCCCcccccC---HHHHHHHHHhcCCceEEEEEhhhh-c
Confidence 8999999988 54 4679999999988653 347778899999999999 577889999999 9999999997 2
Q ss_pred CCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh---hcccccCCChhHHHH
Q 018820 266 ASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV---IRPMYSNPPIHGASI 342 (350)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~i 342 (350)
+.. . .. +... ...+++.||||.+|++| +||++ ++++ . ++...+... ......+++.+.+.+
T Consensus 183 --~~~--~-~~---~~~~-~~di~~~s~sK~~g~~G--~G~~~--~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~a 246 (384)
T 1eg5_A 183 --GKI--P-FS---LEKL-EVDYASFSAHKFHGPKG--VGITY--IRKG-V--PIRPLIHGGGQERGLRSGTQNVPGIVG 246 (384)
T ss_dssp --TTS--C-CC---CTTT-CCSEEEEEGGGGTSCTT--CEEEE--ECTT-S--CCCCSBCSSCTTTTTBCSCCCHHHHHH
T ss_pred --CCc--c-cC---chhc-CCCEEEecHHHhcCCCc--eEEEE--EcCC-C--ccccccccCcccccccCCCCChHHHHH
Confidence 211 0 01 1111 35688999999999888 89988 7632 1 011111110 112334677777776
Q ss_pred HHHHhc
Q 018820 343 VAAILR 348 (350)
Q Consensus 343 ~~~~L~ 348 (350)
+...|+
T Consensus 247 ~~~al~ 252 (384)
T 1eg5_A 247 AARAME 252 (384)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 100
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.87 E-value=9.2e-22 Score=189.50 Aligned_cols=238 Identities=13% Similarity=0.117 Sum_probs=154.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSR-VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~-~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+...+||+.|...+.-|. ..+.+.++.......... ...| +.....+|++.++++. | .++|++ |+|
T Consensus 39 g~~~ld~~~~~~~~~lg~--~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~v~~--~~g 105 (397)
T 2ord_A 39 GNAYLDFTSGIAVNVLGH--SHPRLVEAIKDQAEKLIHCSNLF-WNRPQMELAELLSKNT-F-------GGKVFF--ANT 105 (397)
T ss_dssp CCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHHHCSCCCTTS-EEHHHHHHHHHHHHTT-T-------SCEEEE--ESS
T ss_pred CCEEEECCccccccccCC--CCHHHHHHHHHHHHhcccCcccc-CCHHHHHHHHHHHHhc-C-------CCeEEE--eCC
Confidence 456789988842122221 233444444333211111 1123 2334566777777663 3 468888 999
Q ss_pred chhHHHHHHHHHHHh----cC-CCEEEEcCCCCCCh-HHHHHHcCCe------------EEEEEeecCCCCCCCHHHHHH
Q 018820 151 GTGSLRVGAEFLARH----YH-QRTIYIPQPTWGNH-PKVFTLAGLS------------VKSYRYYDPATRGLNFQGLLE 212 (350)
Q Consensus 151 ~~~al~l~~~l~~~~----~~-gd~Vlv~~P~y~~~-~~~~~~~G~~------------~~~v~~~~~~~~~~d~~~l~~ 212 (350)
+++|+.++...+... .+ ++.|++++|+|... ...++..|.+ ++.+|. .|++.+++
T Consensus 106 g~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~ 178 (397)
T 2ord_A 106 GTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRR 178 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHH
Confidence 999998854332211 04 47899999999664 4477777776 666654 38999999
Q ss_pred HhhcCCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEe
Q 018820 213 DLGSAPAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQ 291 (350)
Q Consensus 213 ~l~~~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 291 (350)
.+++ +..++++++||||||. +++.+++++|+++|+++|+++|+||+|.+|.+.+ +. .....+ .....++
T Consensus 179 ~l~~---~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g--~~-~~~~~~-~~~~d~~--- 248 (397)
T 2ord_A 179 KMSE---DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG--KL-FAYQKY-GVVPDVL--- 248 (397)
T ss_dssp HCCT---TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-SHHHHH-TCCCSEE---
T ss_pred Hhhc---CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCc--cc-hhhhhh-CCCCCee---
Confidence 8864 3458888889999999 9999999999999999999999999999886543 11 222222 1112433
Q ss_pred ccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 292 SYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 292 S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
||||.++ +|+|+||++ +++ ++. .+.........+++.+.+.++...|+
T Consensus 249 s~sK~~~-~G~r~G~~~--~~~-----~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~ 296 (397)
T 2ord_A 249 TTAKGLG-GGVPIGAVI--VNE-----RAN-VLEPGDHGTTFGGNPLACRAGVTVIK 296 (397)
T ss_dssp EECGGGG-TTSCCEEEE--ECS-----TTC-CCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred eeccccC-CCcCeEEEE--Ech-----Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 8899999 999999988 763 233 33322223334567788877776654
No 101
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.87 E-value=1.9e-22 Score=192.88 Aligned_cols=171 Identities=15% Similarity=0.056 Sum_probs=131.8
Q ss_pred CCCC-CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHH----H
Q 018820 112 EYLP-IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKV----F 185 (350)
Q Consensus 112 ~Y~p-~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~----~ 185 (350)
.|.. ..+..+||+++++++ |.+ +++|++ |+|+++++.++ +... +.+||+|++++|+|..+... +
T Consensus 53 ~y~~~~~~~~~l~~~la~~~-g~~-----~~~v~~--~~g~t~a~~~~--~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~ 122 (390)
T 1elu_A 53 ANQHIQQLIAQLRQALAETF-NVD-----PNTITI--TDNVTTGCDIV--LWGLDWHQGDEILLTDCEHPGIIAIVQAIA 122 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TSC-----GGGEEE--ESSHHHHHHHH--HHHSCCCTTCEEEEETTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHc-CCC-----HHHEEE--eCChHHHHHHH--HhCCCCCCCCEEEEecCcccHHHHHHHHHH
Confidence 3543 368899999999985 432 568998 99999999884 3444 57999999999999988654 4
Q ss_pred HHcCCeEEEEEeecC-CCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHH----hcCcEEEEcc
Q 018820 186 TLAGLSVKSYRYYDP-ATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMR----SKGLLPFFDS 260 (350)
Q Consensus 186 ~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~----~~~~~ii~De 260 (350)
+..|++++.++. ++ +++.+|++.+++.+++ +..++++++||||||.+++ +++|.++|+ ++|+++|+||
T Consensus 123 ~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~De 195 (390)
T 1elu_A 123 ARFGITYRFFPV-AATLNQGDAAAVLANHLGP---KTRLVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDG 195 (390)
T ss_dssp HHHCCEEEEECC-GGGSSSSCHHHHHHTTCCT---TEEEEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEEC
T ss_pred HHhCcEEEEEcC-CCCCCccchHHHHHHhcCC---CceEEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEc
Confidence 677999999998 42 4578999999988864 3447888999999999999 678899999 9999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 261 AYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 261 aY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
+|...... .+ + ......+++.|+||.+ ..|.|+||++ ++
T Consensus 196 a~~~g~~~---~~------~-~~~~~d~~~~s~~K~~-~~~~g~G~~~--~~ 234 (390)
T 1elu_A 196 AQSAGSLP---LD------F-SRLEVDYYAFTGHKWF-AGPAGVGGLY--IH 234 (390)
T ss_dssp TTTBTTBC---CC------T-TTSCCSEEEEESSSTT-CCCTTCEEEE--EC
T ss_pred ccccCCcC---CC------h-hhcCCCEEEccccccc-cCCCceEEEE--EC
Confidence 99742211 01 1 1123468899999944 3678899988 66
No 102
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.87 E-value=4.8e-21 Score=186.80 Aligned_cols=209 Identities=13% Similarity=0.074 Sum_probs=146.3
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHH-HhhcCCCCCCCCCCCC----cHHHHHHHHHHHhCCCCCCccCCcEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQ-LVNDRSRVKEYLPIVG----LAEFNKLSAKLILGADSPAIRENRVTT 145 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~-l~~~~~~~~~Y~p~~G----~~~lr~aia~~~~g~~~~~~~~~~v~~ 145 (350)
.+.+.|||+.|.|.... ..+.+.++... +.........|....| ..+|++.+++++ |. + ++++
T Consensus 62 ~g~~~id~~~~~~lg~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~-g~------~-~~i~ 129 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMT----FDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY-GT------T-GAIV 129 (427)
T ss_dssp TTEEEEECSCCCTTCGG----GCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH-TC------S-EEEE
T ss_pred CCceEEEEECcccccCC----CCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh-CC------C-ceEE
Confidence 35568999999762211 23334444333 3210111122333344 488999999986 43 3 3444
Q ss_pred EecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC-CcEEE
Q 018820 146 VQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA-GAIVL 224 (350)
Q Consensus 146 ~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~-~~~~l 224 (350)
+++|++++..+ +.+...+||.|+++.|+|..+...++..|++++.++. .|++.+++.+++... +..+|
T Consensus 130 --~~sGs~a~~~a--l~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v 198 (427)
T 2w8t_A 130 --FSTGYMANLGI--ISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLV 198 (427)
T ss_dssp --ESCHHHHHHHH--HHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEE
T ss_pred --ecCcHHHHHHH--HHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEE
Confidence 66667788763 3445789999999999999999999999999988764 589999999876432 45688
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
++++++||||.+++ +++|+++|+++|+++|+||+|..+.++. ........+.-..+..+++.||||.+|++|
T Consensus 199 ~~~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~--~g~~~~~~~~~~~~~di~~~s~sK~~g~~g--- 270 (427)
T 2w8t_A 199 VLEGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGP--NGRGVYEAQGLEGQIDFVVGTFSKSVGTVG--- 270 (427)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSST--TSCCHHHHTTCTTCCSEEEEESSSTTCSCC---
T ss_pred EEcCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCC--CCCchHhhcCCCcCCcEEEecchhhhccCC---
Confidence 88999999999998 7888999999999999999999987752 111122212112235899999999999777
Q ss_pred eEEEEeeC
Q 018820 305 GALSIVCK 312 (350)
Q Consensus 305 G~l~~v~~ 312 (350)
||++ ++
T Consensus 271 G~v~--~~ 276 (427)
T 2w8t_A 271 GFVV--SN 276 (427)
T ss_dssp EEEE--EC
T ss_pred CEEE--eC
Confidence 9977 65
No 103
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.87 E-value=1.3e-21 Score=193.40 Aligned_cols=232 Identities=13% Similarity=0.137 Sum_probs=154.3
Q ss_pred CCeEEeecc-cccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 73 PVKLNLGVG-AYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 73 ~~~i~l~~G-~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
.+.|+|++| .+ +...++++............ ....+.|. ..|.+ +++++++++..... .+++++ +.||
T Consensus 89 ~~~i~l~~g~~~-~~~~~~~i~~a~~~~~~~~~--~~~~~~Y~-~~g~~-~~~~l~~~la~~~g----~~~~i~--~~sG 157 (464)
T 1ibj_A 89 TLLVNLDNKFDP-FDAMSTPLYQTATFKQPSAI--ENGPYDYT-RSGNP-TRDALESLLAKLDK----ADRAFC--FTSG 157 (464)
T ss_dssp HHHTCCCCSSCT-TCCSSCCCCCCSBCCCSSSS--CCCSCSBT-TTCCH-HHHHHHHHHHHHHT----CSEEEE--ESSH
T ss_pred CeEEECCCCCCC-CCCCCccHHhhhhhhhhccc--ccCCcccc-CCCCH-HHHHHHHHHHHHhC----CCeEEE--ECCH
Confidence 357889998 55 44433333222111100011 12235576 45666 67777666321111 235666 7888
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH----HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV----FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
++|+.++. ..+.+||.|++++|+|..+... ++..|++++.++. .|++.+++.+..+ ..+++++
T Consensus 158 t~al~~~l---~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~-------~d~~~l~~~i~~~---tk~v~l~ 224 (464)
T 1ibj_A 158 MAALSAVT---HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT-------TKLDEVAAAIGPQ---TKLVWLE 224 (464)
T ss_dssp HHHHHHHH---TTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT-------TSHHHHHHHCCSS---EEEEEEC
T ss_pred HHHHHHHH---HHhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCC-------CCHHHHHHHhccC---ceEEEEe
Confidence 88987632 3568999999999999988765 4568999998876 2889999988643 4488899
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc-CcceeE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY-GERVGA 306 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~-G~RvG~ 306 (350)
+||||||.+++ +++|+++|+++|+++|+||+|...... .+. . ....+++.|+||.|+.+ |+|+||
T Consensus 225 ~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g~~~------~~~----~-~~~div~~S~sK~~~g~~Gl~~G~ 290 (464)
T 1ibj_A 225 SPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVLS------RPL----E-LGADIVMHSATKFIAGHSDVMAGV 290 (464)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTTC------CGG----G-TTCSEEEEETTTTTTCSSCCCCEE
T ss_pred CCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCcccccC------Chh----h-cCCEEEEECCcccccCCCCCcEEE
Confidence 99999999995 788899999999999999999753211 011 1 24688999999998744 999999
Q ss_pred EEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 307 LSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 307 l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++ +++++ +.+++.........+.+.+.|.++...|+
T Consensus 291 l~--~~~~~----l~~~l~~~~~~~g~~~~~~~~~a~~~al~ 326 (464)
T 1ibj_A 291 LA--VKGEK----LAKEVYFLQNSEGSGLAPFDCWLCLRGIK 326 (464)
T ss_dssp EE--ECSHH----HHHHHHHHHHHTTCBCCHHHHHHHHHHHT
T ss_pred EE--EChHH----HHHHHHHHHHhcCCCCCHHHHHHHHhchh
Confidence 88 77543 34444444433334566777777655543
No 104
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.86 E-value=9e-21 Score=182.28 Aligned_cols=240 Identities=15% Similarity=0.117 Sum_probs=153.9
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCC-CCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS-RVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~-~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+...+||+.|.+...-| + ..+.+.++......... ....| +.....++++.++++ ++. .+++|++ |+|
T Consensus 44 g~~~ld~~~~~~~~~~g-~-~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~-~~~-----~~~~v~~--~~g 112 (395)
T 1vef_A 44 GNEYIDCVGGYGVANLG-H-GNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAI-LPP-----ELNRVFP--VNS 112 (395)
T ss_dssp SCEEEESSHHHHTCTTC-B-TCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHT-SCT-----TEEEEEE--ESS
T ss_pred CCEEEEccCccccccCC-C-CCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHh-cCC-----CcCEEEE--cCc
Confidence 44678999886422222 1 23444444444331111 11224 445667888888887 332 1578888 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCC-hHHHHHHcCCe------------EEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGN-HPKVFTLAGLS------------VKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~-~~~~~~~~G~~------------~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
+++|+.++...+..+.+||.|++++|+|.. +...++..|.+ +..++. .|++.+++.++.+
T Consensus 113 g~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~ 185 (395)
T 1vef_A 113 GTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEE 185 (395)
T ss_dssp HHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-------CcHHHHHHHhccC
Confidence 999998854332112578999999999975 45566667765 222222 4899999988642
Q ss_pred CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 218 PAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
..+++++.++||||.. .+++++++|+++|++||+++|+||+|.+|.+.+ .. .....+ .....++ ||||.
T Consensus 186 ---~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g--~~-~~~~~~-~~~~d~~---s~sK~ 255 (395)
T 1vef_A 186 ---TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTG--KR-FAFEHF-GIVPDIL---TLAKA 255 (395)
T ss_dssp ---EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-STHHHH-TCCCSEE---EECGG
T ss_pred ---EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCC--ch-hHhhhc-CCCCCEE---EEccc
Confidence 3466666668899976 579999999999999999999999999875432 11 112222 2223444 88999
Q ss_pred cCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 297 LGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
++. |+|+||++ ++ +++.+++.........+++.+.+.++...|
T Consensus 256 ~~~-g~~~G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~al 298 (395)
T 1vef_A 256 LGG-GVPLGVAV--MR-----EEVARSMPKGGHGTTFGGNPLAMAAGVAAI 298 (395)
T ss_dssp GGT-TSSCEEEE--EE-----HHHHHTSCTTSSCCSSTTCHHHHHHHHHHH
T ss_pred ccC-CCceEEEE--eh-----HHHHhhhccCCcCCCcCCCHHHHHHHHHHH
Confidence 995 99999988 76 445554443222223356777776665554
No 105
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.86 E-value=8.1e-21 Score=182.94 Aligned_cols=209 Identities=14% Similarity=0.004 Sum_probs=147.4
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCC--CCCCCC----CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEe
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRS--RVKEYL----PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQ 147 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~--~~~~Y~----p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~ 147 (350)
+.+.|..+.+ . +. .+.+.++......... ....|. ...+..++|+++++++ |.+ +++|++
T Consensus 26 ~~~~ld~~~~-~----~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~-----~~~v~~-- 91 (406)
T 3cai_A 26 GWVHFDAPAG-M----LI-PDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV-NAD-----PGGVVL-- 91 (406)
T ss_dssp SCEECBGGGC-C----CC-CHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH-TCC-----GGGEEE--
T ss_pred CeEEEeCCCc-C----CC-CHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh-CCC-----CCeEEE--
Confidence 4788888877 2 22 3344444443331110 111232 2356789999999986 432 578998
Q ss_pred cCCchhHHHHHHHHHHH---hcCCCEEEEcCCCCCChHHHHHH----cCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCC
Q 018820 148 CLSGTGSLRVGAEFLAR---HYHQRTIYIPQPTWGNHPKVFTL----AGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~---~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 220 (350)
|+|+++++.++. .++ +.+||+|++++|+|+.+...+.. .|++++.+++ +++++.+|++.+++.+.++
T Consensus 92 ~~g~t~al~~~~--~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~-~~~~~~~d~~~l~~~l~~~--- 165 (406)
T 3cai_A 92 GADRAVLLSLLA--EASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEV-DIETGELPTWQWESLISKS--- 165 (406)
T ss_dssp ESCHHHHHHHHH--HHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECC-CTTTCCCCGGGHHHHCCTT---
T ss_pred eCChHHHHHHHH--HHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEec-CcccCCcCHHHHHHHhCCC---
Confidence 999999998853 333 57899999999999987665543 7999999998 5445678999999988643
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc
Q 018820 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY 300 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 300 (350)
..++++++|+||||.+++ +++|.++|+++|+++|+|++|..-... .+ ...+ ...+++.||||.+| +
T Consensus 166 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~---~~---~~~~----~~d~~~~s~~K~~g-~ 231 (406)
T 3cai_A 166 TRLVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYRL---LD---IRET----DADVVTVNAHAWGG-P 231 (406)
T ss_dssp EEEEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTCC---CC---HHHH----CCSEEEEEGGGGTS-C
T ss_pred ceEEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCCC---CC---chhc----CCCEEEeehhhhcC-C
Confidence 448888999999999998 578899999999999999999742211 11 1111 24578999999876 5
Q ss_pred Cccee-EEEEeeCChhHHHHHHHHHH
Q 018820 301 GERVG-ALSIVCKTADVAGRVESQVK 325 (350)
Q Consensus 301 G~RvG-~l~~v~~~~~~~~~~~~~l~ 325 (350)
+ +| |++ ++ +++.+++.
T Consensus 232 ~--~G~~~~--~~-----~~~~~~l~ 248 (406)
T 3cai_A 232 P--IGAMVF--RD-----PSVMNSFG 248 (406)
T ss_dssp S--CEEEEE--SC-----HHHHHTSC
T ss_pred C--cCeEEE--Ee-----hHHHhhcC
Confidence 4 99 877 76 45555443
No 106
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.86 E-value=1e-20 Score=178.56 Aligned_cols=207 Identities=14% Similarity=0.017 Sum_probs=146.9
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEec
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQC 148 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~t 148 (350)
.|+.|+|+.+.+ . .+.+.+.++..... . .|.+..|..++++++++++ +|.+ +++|++ |
T Consensus 12 ~p~~i~l~~~~~-~-----~~~~~v~~a~~~~~--~----~~~~~~g~~~~~~~~~~~l~~~~g~~-----~~~v~~--~ 72 (359)
T 1svv_A 12 KPKPYSFVNDYS-V-----GMHPKILDLMARDN--M----TQHAGYGQDSHCAKAARLIGELLERP-----DADVHF--I 72 (359)
T ss_dssp ---CEECSCSCS-S-----CCCHHHHHHHHHHT--T----CCCCSTTCSHHHHHHHHHHHHHHTCT-----TSEEEE--E
T ss_pred CCeeEEecCCCc-C-----CCCHHHHHHHHHHH--h----hccccccccHHHHHHHHHHHHHhCCC-----CccEEE--e
Confidence 467899998655 2 22455666655544 1 3666678888888888873 4532 678998 9
Q ss_pred CCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH--HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC----CCcE
Q 018820 149 LSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK--VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP----AGAI 222 (350)
Q Consensus 149 ~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~--~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~ 222 (350)
+|+++++.++. .....+||+|++++|+|..+.. .++..|++++.+|. + ++.+|++.+++.+++.+ .+..
T Consensus 73 ~g~t~a~~~~~--~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~l~~~~~~~~~~~~ 147 (359)
T 1svv_A 73 SGGTQTNLIAC--SLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPC-P--DGKLRVADIESALHENRSEHMVIPK 147 (359)
T ss_dssp SCHHHHHHHHH--HHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECC-T--TSCCCHHHHHHHHHHSCSTTSCEEE
T ss_pred CCchHHHHHHH--HHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeC-C--CCeecHHHHHHHHHHHHhccCCCce
Confidence 99999999854 4446799999999999998877 57889999999987 4 57899999999987641 1244
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE 302 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~ 302 (350)
++++++| ||||.+++.+++++|+++|+++|+++|+||+|.+|..+....+...+. +... .-+++.|++|..+ ..
T Consensus 148 ~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~--~d~~~~s~~K~g~--~~ 221 (359)
T 1svv_A 148 LVYISNT-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLAD-IARL--TDMFYIGATKAGG--MF 221 (359)
T ss_dssp EEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHH-HHHH--CSEEEEECTTTTC--SS
T ss_pred EEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhh-hhhc--CCEEEEecccCCC--CC
Confidence 7777788 899999999999999999999999999999995553221111111110 0011 1256778999633 46
Q ss_pred ceeEEE
Q 018820 303 RVGALS 308 (350)
Q Consensus 303 RvG~l~ 308 (350)
++|+++
T Consensus 222 ~~g~l~ 227 (359)
T 1svv_A 222 GEALII 227 (359)
T ss_dssp CEEEEE
T ss_pred ceEEEE
Confidence 678766
No 107
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.86 E-value=4e-21 Score=184.50 Aligned_cols=220 Identities=12% Similarity=0.094 Sum_probs=147.2
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchh
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTG 153 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~ 153 (350)
+++|++.|.+ + +.+.+.+.++... ...|... ..++++..+++ +|.+ + ++++++ ++|+++
T Consensus 29 ~v~~~~~~~~-~----~~~~~~v~~a~~~-------~~~~~~~--~~~~~~~~a~~-~g~~-~---~~~~~~--~~ggt~ 87 (374)
T 2aeu_A 29 ALYDLSGLSG-G----FLIDEKDKALLNT-------YIGSSYF--AEKVNEYGLKH-LGGD-E---NDKCVG--FNRTSS 87 (374)
T ss_dssp GCEECSSCCC-C----CCCCHHHHHHHTS-------TTHHHHH--HHHHHHHHHHH-HTCC-T---TEEEEE--ESSHHH
T ss_pred ceeeecccCC-C----CCCCHHHHHHHHH-------hcCchHH--HHHHHHHHHHH-hCCC-C---cceEEE--EcChHH
Confidence 6899999876 2 2334555554331 0111000 12333333333 4543 1 467888 999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCChHH---HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEE-EEecCC
Q 018820 154 SLRVGAEFLARHYHQRTIYIPQPTWGNHPK---VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIV-LLHACA 229 (350)
Q Consensus 154 al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~-l~~~~p 229 (350)
++.++. .+ + +||+|++++|+|+.+.. .++..|++++.+ .|++.+++. .. +..+ +++++|
T Consensus 88 a~~~~~--~~-~-~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~---~~~~~v~~~~p 150 (374)
T 2aeu_A 88 AILATI--LA-L-KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-ID---KDTLVIITGST 150 (374)
T ss_dssp HHHHHH--HH-H-CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CC---TTEEEEEECBC
T ss_pred HHHHHH--Hh-C-CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CC---CccEEEEEccC
Confidence 998843 33 3 99999999999988665 567889998877 277888776 32 3346 888999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
|||||. +.+++++|+++|+++|+++|+||+|..+..+.. ...... .. ...+++.||||.+ +|+|+||++
T Consensus 151 ~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~----~~-~~di~~~S~sK~l--~g~~~G~~~- 219 (374)
T 2aeu_A 151 MDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLF-NQPPAL----KL-GADLVVTSTDKLM--EGPRGGLLA- 219 (374)
T ss_dssp TTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHT-TCCCHH----HH-TCSEEEEETTSSS--SSCSCEEEE-
T ss_pred CCCCCC--CcccHHHHHHHHHHcCCEEEEECCccccccccc-ccCCcc----cc-CCcEEEecCcccc--cCcceEEEE-
Confidence 999998 889999999999999999999999977641100 000011 11 2357889999984 689999977
Q ss_pred eeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 310 VCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 310 v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++ +++++++.........+++.+.+.++...|+
T Consensus 220 -~~-----~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~ 252 (374)
T 2aeu_A 220 -GK-----KELVDKIYIEGTKFGLEAQPPLLAGIYRALK 252 (374)
T ss_dssp -EE-----HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHH
T ss_pred -EC-----HHHHHHHHHhhccccCCCCHHHHHHHHHHHH
Confidence 66 4556666555443334677788877776654
No 108
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.85 E-value=1.3e-20 Score=182.21 Aligned_cols=208 Identities=13% Similarity=0.067 Sum_probs=142.2
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCC----CCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEE
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEY----LPIVGLAEFNKLSAKLILGADSPAIRENRVTTV 146 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y----~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~ 146 (350)
.+...+||+...+.+..+ +..++++..+.+.........| +......+|++++++++ +. +. .++
T Consensus 57 ~g~~~ld~~s~~~l~~~~---~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~------~~-~i~- 124 (409)
T 3kki_A 57 ASPDDIILQSNDYLALAN---HPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT-GF------DE-CLL- 124 (409)
T ss_dssp CCTTSEECCCSCTTCCTT---CHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH-TC------SE-EEE-
T ss_pred CCCceEEeeccCccCCcC---CHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh-CC------Ce-EEE-
Confidence 356789998876633222 2333444444443111111222 22344678999999885 43 22 333
Q ss_pred ecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEe
Q 018820 147 QCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLH 226 (350)
Q Consensus 147 ~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~ 226 (350)
+++|++++.. .+.+.+.+||.|++++|+|+.+...++..|++++.++. .|++.+++.+++... .++++
T Consensus 125 -~~sGt~a~~~--~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~--~~vi~ 192 (409)
T 3kki_A 125 -SQSGWNANVG--LLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGP--GIIVV 192 (409)
T ss_dssp -ESCHHHHHHH--HHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCS--CEEEE
T ss_pred -ecchHHHHHH--HHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCC--eEEEE
Confidence 5556788876 34566789999999999999999999999999887754 589999999875321 37888
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeE
Q 018820 227 ACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA 306 (350)
Q Consensus 227 ~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~ 306 (350)
++|+||||.+++ +++|+++|++||+++|+||+|.++.++. ........+.......|++.||||.++++ .||
T Consensus 193 ~~~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~--~g~~~~~~~~~~~~~di~~~s~sK~~~~~---gg~ 264 (409)
T 3kki_A 193 DSIYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHGP--NGAGLLAELGLTREVHFMTASLAKTFAYR---AGA 264 (409)
T ss_dssp ESBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG--GGCCHHHHHTCGGGCSEEEEESSSTTCSS---CEE
T ss_pred CCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCC--CCCcchhhcCCCCCCCEEEeecchhhCCC---ceE
Confidence 999999999998 7889999999999999999999865542 11112222211112458899999999966 388
Q ss_pred EEEeeC
Q 018820 307 LSIVCK 312 (350)
Q Consensus 307 l~~v~~ 312 (350)
++ ++
T Consensus 265 v~--~~ 268 (409)
T 3kki_A 265 IW--CN 268 (409)
T ss_dssp EE--ES
T ss_pred EE--EC
Confidence 77 65
No 109
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.85 E-value=2e-20 Score=179.68 Aligned_cols=240 Identities=10% Similarity=0.060 Sum_probs=156.5
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...+||+.+.+...-|. ..+.+.++.............+.+..-..++++.++++. | .+++++ ++||
T Consensus 35 g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g-------~~~v~~--~~~g 102 (392)
T 3ruy_A 35 GNRYMDLLSAYSAVNQGH--RHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT-N-------KEMVLP--MNTG 102 (392)
T ss_dssp CCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH-T-------CSEEEE--ESSH
T ss_pred CCEEEEcCCChhhhccCC--CCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc-C-------CCEEEE--eCcH
Confidence 456899998854222221 234455554443311111111123344577888888874 3 468888 9999
Q ss_pred hhHHHHHHHHHHHh--------cCCCEEEEcCCCCCChHHHHHHcCC-------------eEEEEEeecCCCCCCCHHHH
Q 018820 152 TGSLRVGAEFLARH--------YHQRTIYIPQPTWGNHPKVFTLAGL-------------SVKSYRYYDPATRGLNFQGL 210 (350)
Q Consensus 152 ~~al~l~~~l~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~d~~~l 210 (350)
++|+.++..++... ..+|.|+++.|+|..+.......+. .+..+++ .|++.+
T Consensus 103 t~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 175 (392)
T 3ruy_A 103 AEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEAL 175 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHH
Confidence 99998865433222 2367999999999777655543322 2333333 279999
Q ss_pred HHHhhcCCCCcEEEEecCCCCCCCCCCCHHH-HHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 211 LEDLGSAPAGAIVLLHACAHNPTGVDPTLQQ-WERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 211 ~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~-~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
++.++. +..++++++||||||.+++.++ +++|+++|++||+++|+||+|.+|.+.+ .. ..... .....+++
T Consensus 176 ~~~l~~---~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g--~~-~~~~~-~~~~~d~~- 247 (392)
T 3ruy_A 176 KAAITP---NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTG--KV-FACDW-DNVTPDMY- 247 (392)
T ss_dssp HHHCCT---TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTS--SS-SGGGG-GTCCCSEE-
T ss_pred HHHhcc---CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccc--cc-hhhhc-cCCCCCEE-
Confidence 998873 3458888899999999996555 9999999999999999999999886543 11 11111 11223444
Q ss_pred EeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 290 AQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 290 ~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+|||.++ .| +|+||++ ++ +++.+.+.........+++.+++.++...|+
T Consensus 248 --~~SK~l~-gG~~~~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 297 (392)
T 3ruy_A 248 --ILGKALG-GGVFPISCAA--AN-----RDILGVFEPGSHGSTFGGNPLACAVSIAALE 297 (392)
T ss_dssp --EECGGGG-TTTSCCEEEE--EC-----HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred --EEchhhh-CChhhhEEEE--EC-----HHHHhhhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 7799876 46 9999988 76 5666666555554455778888887777664
No 110
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.85 E-value=3.7e-21 Score=184.56 Aligned_cols=186 Identities=12% Similarity=0.078 Sum_probs=140.0
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEE
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTI 171 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~V 171 (350)
.+.+.++....... . ...|.+..+..+||+++++++ |. ++.|++ ++| ++|+.++ +.+. +.+||+|
T Consensus 16 ~~~~~~a~~~~l~~-~-~~~~~~~~~~~~l~~~la~~~-~~------~~~i~~--~sG-t~al~~~--l~~l~~~~gd~V 81 (388)
T 1b9h_A 16 DDAERNGLVRALEQ-G-QWWRMGGDEVNSFEREFAAHH-GA------AHALAV--TNG-THALELA--LQVMGVGPGTEV 81 (388)
T ss_dssp CHHHHHHHHHHHHT-S-CCBTTTCSHHHHHHHHHHHHT-TC------SEEEEE--SCH-HHHHHHH--HHHTTCCTTCEE
T ss_pred CHHHHHHHHHHHHc-C-CeeecCCHHHHHHHHHHHHHh-CC------CeEEEe--CCH-HHHHHHH--HHHcCCCCcCEE
Confidence 35555555544422 2 235777788999999999985 43 245665 665 8999884 4455 6789999
Q ss_pred EEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh
Q 018820 172 YIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS 251 (350)
Q Consensus 172 lv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~ 251 (350)
++++|+|..+...++..|++++.++. +++++.+|++.+++.++.+ ..+++ |+||||.+.+ +++|.++|++
T Consensus 82 i~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~i~~~---~~~v~---~~n~tG~~~~---l~~i~~la~~ 151 (388)
T 1b9h_A 82 IVPAFTFISSSQAAQRLGAVTVPVDV-DAATYNLDPEAVAAAVTPR---TKVIM---PVHMAGLMAD---MDALAKISAD 151 (388)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECB-CTTTCCBCHHHHHHHCCTT---EEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred EECCCccHHHHHHHHHcCCEEEEEec-CCCcCCCCHHHHHHhcCcC---ceEEE---EeCCccCcCC---HHHHHHHHHH
Confidence 99999999999999999999999998 6666889999999988643 23444 8999999865 5778899999
Q ss_pred cCcEEEEccCCCC-CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCCh
Q 018820 252 KGLLPFFDSAYQG-FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTA 314 (350)
Q Consensus 252 ~~~~ii~DeaY~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~ 314 (350)
+|+++|+|++|.. +.+.+ .+ + ... ..+.+.||||..+++|.|+||++ ++++
T Consensus 152 ~~~~li~D~a~~~g~~~~~--~~---~---~~~--~~i~~~S~s~~K~l~g~~~G~~~--~~~~ 203 (388)
T 1b9h_A 152 TGVPLLQDAAHAHGARWQG--KR---V---GEL--DSIATFSFQNGKLMTAGEGGAVV--FPDG 203 (388)
T ss_dssp HTCCBCEECTTCTTCEETT--EE---G---GGS--SSCEEEECCTTSSSCSSSCEEEE--ECTT
T ss_pred cCCEEEEecchhcCCccCC--ee---c---ccc--cceEEEEccCCCcccCCCeEEEE--ECCH
Confidence 9999999999986 33322 11 1 111 26889999988888888999987 7754
No 111
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.85 E-value=1.4e-20 Score=181.90 Aligned_cols=227 Identities=13% Similarity=0.106 Sum_probs=148.4
Q ss_pred eecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHH
Q 018820 78 LGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYL--PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSL 155 (350)
Q Consensus 78 l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~--p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al 155 (350)
.+++.| +.....+..+.++++...+. ++...+.|. +.....+|++.++++. |. + +.++ +.+|++|+
T Consensus 26 ~~~~~p-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~~~l~~~la~~~-g~------~-~~i~--~~sG~~a~ 93 (398)
T 1gc0_A 26 GALVPP-VYQTATFTFPTVEYGAACFA-GEQAGHFYSRISNPTLNLLEARMASLE-GG------E-AGLA--LASGMGAI 93 (398)
T ss_dssp TBSSCC-BCCCSCBCCC----------------------CCHHHHHHHHHHHHHH-TC------S-EEEE--ESSHHHHH
T ss_pred CCcCCC-ccCCCccccCCHHHHHHhhc-CCcCCCcccCCCChHHHHHHHHHHHHh-CC------C-cEEE--ECCHHHHH
Confidence 455555 55555566666666654332 121223344 4556788999999985 43 2 3444 66668999
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 156 RVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 156 ~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
.++ +.+.+.+||.|++++|+|..+...+ +..|++++.++. .|++.+++.++++ ..++++++|+|
T Consensus 94 ~~~--l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~---~~~v~~~~~~n 161 (398)
T 1gc0_A 94 TST--LWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALEAAMTPA---TRVIYFESPAN 161 (398)
T ss_dssp HHH--HHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-------TCHHHHHHHCCTT---EEEEEEESSCT
T ss_pred HHH--HHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-------CCHHHHHHhcCCC---CeEEEEECCCC
Confidence 884 4455789999999999999887776 677999888865 3789999988653 44788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEe
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIV 310 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v 310 (350)
|||.+++ +++|+++|+++|+++|+|++|..+.+.. +. .. ...+++.|+||.++.+|+|+ ||++
T Consensus 162 ptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~------~~----~~-~~d~~~~S~sK~~~~~~~~~~G~l~-- 225 (398)
T 1gc0_A 162 PNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR------PL----EL-GADLVVHSATKYLSGHGDITAGIVV-- 225 (398)
T ss_dssp TTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC------GG----GG-TCSEEEEETTTTTTCSSSCCCEEEE--
T ss_pred CCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC------ch----hh-CceEEEECCccccCCCCCCeEEEEE--
Confidence 9999996 7888999999999999999998765431 11 11 35688999999999999998 8876
Q ss_pred eCChhHHHHHHHHHHHhhcc-cccCCChhHHHHHHHHhc
Q 018820 311 CKTADVAGRVESQVKLVIRP-MYSNPPIHGASIVAAILR 348 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~q~i~~~~L~ 348 (350)
++ ++.+. ..+...... ...+.+.+.+.++...|+
T Consensus 226 ~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 260 (398)
T 1gc0_A 226 GS-QALVD---RIRLQGLKDMTGAVLSPHDAALLMRGIK 260 (398)
T ss_dssp EC-HHHHH---HHHHTHHHHHTCCCCCHHHHHHHHHHHT
T ss_pred EC-hHHHH---HHHHHHhhccCCCCCCHHHHHHHHhccc
Confidence 65 22221 133333322 223456666666555443
No 112
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.85 E-value=9.6e-21 Score=182.83 Aligned_cols=203 Identities=18% Similarity=0.148 Sum_probs=149.8
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCch
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGT 152 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~ 152 (350)
.+.|||+.|.+ + .. +.+.++....... ..|.+..+..+||+++++++ +. + ++++ +.||+
T Consensus 30 ~~~id~~~~~~-~-----~~-~~v~~a~~~~~~~----~~y~~~~~~~~l~~~la~~~-~~------~-~~v~--~~~Gt 88 (399)
T 2oga_A 30 VPFLDLKAAYE-E-----LR-AETDAAIARVLDS----GRYLLGPELEGFEAEFAAYC-ET------D-HAVG--VNSGM 88 (399)
T ss_dssp BCSCCHHHHHH-H-----TH-HHHHHHHHHHHHH----TCCSSSHHHHHHHHHHHHHT-TS------S-EEEE--ESCHH
T ss_pred CcccccCcCCC-C-----CC-HHHHHHHHHHHhc----CCCCCchhHHHHHHHHHHHH-CC------C-eEEE--ecCHH
Confidence 35789999987 2 22 4555555544312 24767788999999999984 43 2 4555 77789
Q ss_pred hHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 153 GSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 153 ~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
+++.++ +.+. +.+||+|++++|+|+.+...++..|++++.+++ +++++.+|++.+++.++++ ..+++ |+|
T Consensus 89 ~a~~~~--l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~~~---~~~v~---~~n 159 (399)
T 2oga_A 89 DALQLA--LRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEP-HEDHPTLDPLLVEKAITPR---TRALL---PVH 159 (399)
T ss_dssp HHHHHH--HHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECB-CSSSSSBCHHHHHHHCCTT---EEEEC---CBC
T ss_pred HHHHHH--HHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEec-CCCCCCcCHHHHHHhcCCC---CeEEE---EeC
Confidence 999884 4444 678999999999999999999999999999998 6556789999999988653 23444 579
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecc--ccccCccCcceeEEEE
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSY--AKNLGLYGERVGALSI 309 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~--SK~~gl~G~RvG~l~~ 309 (350)
|||...+ +++|.++|+++|+++|+||+|..+...+ .. ....+ ..+++.|| ||.+|.+| |+||++
T Consensus 160 ~tG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~--~~--~~~~~-----~di~~~S~~~sK~~~~~G-~~g~~~- 225 (399)
T 2oga_A 160 LYGHPAD---MDALRELADRHGLHIVEDAAQAHGARYR--GR--RIGAG-----SSVAAFSFYPGKNLGCFG-DGGAVV- 225 (399)
T ss_dssp GGGCCCC---HHHHHHHHHHHTCEECEECTTCTTCEET--TE--ETTCT-----TCEEEEECCTTSSSCCSS-CCEEEE-
T ss_pred CcCCccC---HHHHHHHHHHcCCEEEEECcccccCccC--Ce--ecccc-----cCEEEEeCCCCccCCcCC-ceEEEE-
Confidence 9999876 6788999999999999999998664211 11 11111 13788888 89999779 999977
Q ss_pred eeCChhHHHHH
Q 018820 310 VCKTADVAGRV 320 (350)
Q Consensus 310 v~~~~~~~~~~ 320 (350)
+++++..+++
T Consensus 226 -~~~~~~~~~l 235 (399)
T 2oga_A 226 -TGDPELAERL 235 (399)
T ss_dssp -ESCHHHHHHH
T ss_pred -eCCHHHHHHH
Confidence 7766544443
No 113
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.85 E-value=8.3e-21 Score=184.72 Aligned_cols=201 Identities=19% Similarity=0.199 Sum_probs=149.1
Q ss_pred EeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHH
Q 018820 77 NLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP-IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSL 155 (350)
Q Consensus 77 ~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p-~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al 155 (350)
+|+.|.| +.. . .+.+.++....... ..|++ ..|..+||+++++++ +. +++++ |+|+++++
T Consensus 20 ~l~~~~p-~~~---~-p~~~~~a~~~~~~~----~~y~~~~~~~~~l~~~la~~~-~~-------~~v~~--~~ggt~al 80 (424)
T 2po3_A 20 PLLVGRP-NRI---D-RARLYERLDRALDS----QWLSNGGPLVREFEERVAGLA-GV-------RHAVA--TCNATAGL 80 (424)
T ss_dssp CEETTCC-CCC---C-HHHHHHHHHHHHHH----TCCSSSCHHHHHHHHHHHHHH-TS-------SEEEE--ESCHHHHH
T ss_pred cccccCC-CCC---C-hHHHHHHHHHHHhc----CCcccCCHHHHHHHHHHHHHh-CC-------CeEEE--eCCHHHHH
Confidence 6888988 432 1 23444444444312 13876 688999999999996 32 47888 99999999
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCC
Q 018820 156 RVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGV 235 (350)
Q Consensus 156 ~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~ 235 (350)
.++.. + +.+||+|++++|+|..+...++..|++++.+++ +++++.+|++.+++.++++ ..++++ +||||.
T Consensus 81 ~~~l~--~-l~~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~~---~~~v~~---~~~tG~ 150 (424)
T 2po3_A 81 QLLAH--A-AGLTGEVIMPSMTFAATPHALRWIGLTPVFADI-DPDTGNLDPDQVAAAVTPR---TSAVVG---VHLWGR 150 (424)
T ss_dssp HHHHH--H-HTCCSEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTSSBCHHHHGGGCCTT---EEEEEE---ECGGGC
T ss_pred HHHHH--H-cCCCCEEEECCCccHHHHHHHHHcCCEEEEEec-CCCcCCcCHHHHHHhhCcC---CcEEEE---ECCCCC
Confidence 88543 3 247899999999999999999999999999998 6556789999999887643 335555 359998
Q ss_pred CCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCCh
Q 018820 236 DPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTA 314 (350)
Q Consensus 236 ~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~ 314 (350)
. +++++|+++|+++|+++|+||+|. ++.+++ . ++. ... . +++.||||..+++|+|+||++ ++++
T Consensus 151 ~---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~---~~~---~~~-d-i~~~S~sk~K~l~~~~~G~~v--~~~~ 215 (424)
T 2po3_A 151 P---CAADQLRKVADEHGLRLYFDAAHALGCAVDG--R---PAG---SLG-D-AEVFSFHATKAVNAFEGGAVV--TDDA 215 (424)
T ss_dssp C---CCHHHHHHHHHHTTCEEEEECTTCTTCEETT--E---ETT---SSS-S-EEEEECCTTSSSCCSSCEEEE--ESCH
T ss_pred c---CCHHHHHHHHHHcCCEEEEECccccCCeECC--e---ecc---ccc-C-EEEEeCCCCCCccCCCCeEEE--eCCH
Confidence 6 467888999999999999999999 576542 1 111 112 3 889999977777889999988 7765
Q ss_pred hHHHHHH
Q 018820 315 DVAGRVE 321 (350)
Q Consensus 315 ~~~~~~~ 321 (350)
+..+++.
T Consensus 216 ~l~~~l~ 222 (424)
T 2po3_A 216 DLAARIR 222 (424)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5444443
No 114
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.85 E-value=1.2e-21 Score=189.82 Aligned_cols=165 Identities=16% Similarity=0.146 Sum_probs=126.9
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH--hcCCCEEEEcCCCCCChHHHH---HHcCCeE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR--HYHQRTIYIPQPTWGNHPKVF---TLAGLSV 192 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~--~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~ 192 (350)
+..++++.+++++ +.+ +++|++ |+|+++|+.++...+.. ..+||.|++++|+|+.+...+ +..|+++
T Consensus 69 ~~~~l~~~la~~~-~~~-----~~~v~~--~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~ 140 (423)
T 3lvm_A 69 AVDIARNQIADLV-GAD-----PREIVF--TSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEV 140 (423)
T ss_dssp HHHHHHHHHHHHH-TCC-----GGGEEE--ESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHc-CCC-----CCeEEE--eCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEE
Confidence 4477888888875 432 678999 99999999885432211 127999999999999987777 4559999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~ 272 (350)
+.++. ++ ++.+|++.+++.++++ ..++++++||||||.+++ +++|+++|+++|+++|+||+|...... .
T Consensus 141 ~~v~~-~~-~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~---~ 209 (423)
T 3lvm_A 141 TYLAP-QR-NGIIDLKELEAAMRDD---TILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP---I 209 (423)
T ss_dssp EEECC-CT-TSCCCHHHHHHHCCTT---EEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC---C
T ss_pred EEecc-CC-CCccCHHHHHHhcCCC---cEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC---c
Confidence 99998 54 4678999999998753 458889999999999999 667899999999999999998653221 0
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
.. ......+++.||||.+|.+| +||++ ++
T Consensus 210 ---~~----~~~~~di~~~s~sK~~g~~g--~G~~~--~~ 238 (423)
T 3lvm_A 210 ---DL----SQLKVDLMSFSGHKIYGPKG--IGALY--VR 238 (423)
T ss_dssp ---CT----TTSCCSEEEEESTTTTSCSS--CEEEE--EC
T ss_pred ---Ch----hhcCCCEEEechHHhcCCCC--eEEEE--Ee
Confidence 00 11124588999999888777 89887 65
No 115
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.85 E-value=1.2e-20 Score=180.94 Aligned_cols=169 Identities=11% Similarity=0.087 Sum_probs=128.3
Q ss_pred CCCC--CCcHHHHHHHHHHHhCCCCCCccCC-cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH--HHHHH
Q 018820 113 YLPI--VGLAEFNKLSAKLILGADSPAIREN-RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP--KVFTL 187 (350)
Q Consensus 113 Y~p~--~G~~~lr~aia~~~~g~~~~~~~~~-~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~--~~~~~ 187 (350)
|.+. ....++|+++++++ |.+ ++ +|++ |+|+++++.++ +.+.+.+||+|++++|+|+.|. ..++.
T Consensus 45 ~~~~~~~~~~~l~~~la~~~-~~~-----~~~~v~~--~~g~t~al~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~ 114 (396)
T 2ch1_A 45 FHAELFRTMDEVKDGLRYIF-QTE-----NRATMCV--SGSAHAGMEAM--LSNLLEEGDRVLIAVNGIWAERAVEMSER 114 (396)
T ss_dssp TCHHHHHHHHHHHHHHHHHH-TCC-----CSCEEEE--SSCHHHHHHHH--HHHHCCTTCEEEEEESSHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHh-CCC-----CCcEEEE--CCcHHHHHHHH--HHHhcCCCCeEEEEcCCcccHHHHHHHHH
Confidence 5442 23789999999985 432 45 7888 99999999884 4445789999999999999885 47788
Q ss_pred cCCeEEEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 188 AGLSVKSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 188 ~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
.|++++.++. ++ ++.+|++.+++.+++ +++ ++++++||||||.+++ +++|+++|+++|+++|+||+|. +.
T Consensus 115 ~g~~~~~v~~-~~-~~~~d~~~l~~~l~~~~~~---~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~Dea~~-~g 185 (396)
T 2ch1_A 115 YGADVRTIEG-PP-DRPFSLETLARAIELHQPK---CLFLTHGDSSSGLLQP---LEGVGQICHQHDCLLIVDAVAS-LC 185 (396)
T ss_dssp TTCEEEEEEC-CT-TSCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTT-BT
T ss_pred cCCceEEecC-CC-CCCCCHHHHHHHHHhCCCC---EEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEEcccc-cc
Confidence 9999999998 54 467999999999876 444 7778999999999998 6788999999999999999997 22
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
.. . .. +...+.. +++.|++|.++ .+.++||++ ++
T Consensus 186 ~~----~-~~---~~~~~~d-~~~~s~~K~~~-~~~g~g~~~--~~ 219 (396)
T 2ch1_A 186 GV----P-FY---MDKWEID-AVYTGAQKVLG-APPGITPIS--IS 219 (396)
T ss_dssp TB----C-CC---TTTTTCC-EEECCCC-CCC-CCSSCEEEE--EC
T ss_pred CC----c-cc---hhhcCcC-EEEEcCCcccc-CCCCeEEEE--EC
Confidence 11 1 01 1111223 55689999876 456679877 65
No 116
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.85 E-value=8.9e-21 Score=178.01 Aligned_cols=184 Identities=15% Similarity=0.104 Sum_probs=137.3
Q ss_pred HHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEEEEE
Q 018820 121 EFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVKSYR 196 (350)
Q Consensus 121 ~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~ 196 (350)
+|++++++++ |. ++.++ +.+|++|+.++ +.+.+.+||.|++++|+|+.+...+ +..|++++.++
T Consensus 2 ~l~~~la~~~-g~------~~~i~---~~sG~~a~~~~--~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 69 (331)
T 1pff_A 2 ALEGKIAKLE-HA------EACAA---TASGMGAIAAS--VWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFID 69 (331)
T ss_dssp HHHHHHHHHH-TC------SEEEE---ESSHHHHHHHH--HHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred hHHHHHHHHh-CC------CeEEE---eCChHHHHHHH--HHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeC
Confidence 6899999985 43 33444 45558999884 3445789999999999999887765 45899998886
Q ss_pred eecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh-cCcEEEEccCCCCCCCCCCCCchH
Q 018820 197 YYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS-KGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 197 ~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~-~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
. .|++.+++.++++ ..++++++|+||||.+++ +++|.++|++ +|+++|+|++|..+.+..
T Consensus 70 ~-------~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~------ 130 (331)
T 1pff_A 70 M-------AVPGNIEKHLKPN---TRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN------ 130 (331)
T ss_dssp T-------TSTTHHHHTCCTT---EEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC------
T ss_pred C-------CCHHHHHHhhcCC---CeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC------
Confidence 5 4778888877643 347888999999999996 7888999999 999999999998654321
Q ss_pred HHHHHhhcCCcEEEEeccccccCccCcc-eeEEEEeeCChhHHHHHHHHHHHhhcc-cccCCChhHHHHHHHH
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYGER-VGALSIVCKTADVAGRVESQVKLVIRP-MYSNPPIHGASIVAAI 346 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G~R-vG~l~~v~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~q~i~~~~ 346 (350)
+. . ....+++.||||.|+.+|.| +||++ ++++ ++.+++...... ...+++.+.+.++...
T Consensus 131 ~~----~-~~~d~~~~s~~K~~~~~~~r~~G~~~--~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (331)
T 1pff_A 131 PL----D-LGVDIVVHSATKYINGHTDVVAGLVC--SRAD----IIAKVKSQGIKDITGAIISPHDAWLITRG 192 (331)
T ss_dssp GG----G-GTCSEEEEETTTTTSSSSSCCCEEEE--ECHH----HHHHHHHTCCCCCCCCCCCHHHHHHHHHH
T ss_pred hh----h-cCCcEEEEECccccCCCCCceEEEEE--eCcH----HHHHHHHHHHHhhcCCCCCHHHHHHHHcC
Confidence 11 1 23678999999999999999 79987 7721 566666666554 4456677777654433
No 117
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.85 E-value=1e-20 Score=181.24 Aligned_cols=211 Identities=16% Similarity=0.099 Sum_probs=148.2
Q ss_pred hccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhCCCCCCccCC-cE
Q 018820 67 YNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP--IVGLAEFNKLSAKLILGADSPAIREN-RV 143 (350)
Q Consensus 67 ~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p--~~G~~~lr~aia~~~~g~~~~~~~~~-~v 143 (350)
+..-..+..+++..|.. + +.+.+.++..... . ..|.+ ..+..++|+++++++ |.+ ++ +|
T Consensus 12 ~~~~~~~~~~~~~~g~~------~-~~~~v~~a~~~~~--~---~~~~~~~~~~~~~l~~~la~~~-g~~-----~~~~i 73 (393)
T 2huf_A 12 REPLVTPNKLLMGPGPS------N-APQRVLDAMSRPI--L---GHLHPETLKIMDDIKEGVRYLF-QTN-----NIATF 73 (393)
T ss_dssp GSCCCCCCCEECSSSCC------C-CCHHHHHHTTSCC--C---CTTSHHHHHHHHHHHHHHHHHH-TCC-----CSEEE
T ss_pred hcccCCCCeEEecCCCC------C-CCHHHHHHHHhhh--c---cCCCHHHHHHHHHHHHHHHHHh-CCC-----CCcEE
Confidence 33334556778777733 2 2344555443322 1 12433 356789999999985 442 33 78
Q ss_pred EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH--HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-CCCC
Q 018820 144 TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP--KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-APAG 220 (350)
Q Consensus 144 ~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~--~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~ 220 (350)
++ |+|+++++.++. .+.+.+||+|++++|+|+.+. .+++..|++++.+++ ++ ++.+|++.+++.+++ +++
T Consensus 74 ~~--~~g~t~a~~~~~--~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~~~~- 146 (393)
T 2huf_A 74 CL--SASGHGGMEATL--CNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKS-KV-GQSLSLDEIRDALLIHKPS- 146 (393)
T ss_dssp EE--SSCHHHHHHHHH--HHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCHHHHHHHHHHHCCS-
T ss_pred EE--cCcHHHHHHHHH--HHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeC-CC-CCCCCHHHHHHHHhccCCc-
Confidence 88 999999999854 444789999999999997742 345678999999998 54 357999999999876 554
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccc-cCc
Q 018820 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN-LGL 299 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~-~gl 299 (350)
++++++|+||||..++ +++|+++|+++|+++|+|+++.. .... . . + ......+++.|+||. +|+
T Consensus 147 --~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~li~D~a~~~-~~~~--~---~---~-~~~~~d~~~~s~sK~l~g~ 211 (393)
T 2huf_A 147 --VLFLTQGDSSTGVLQG---LEGVGALCHQHNCLLIVDTVASL-GGAP--M---F---M-DRWEIDAMYTGSQKVLGAP 211 (393)
T ss_dssp --EEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTB-TTBC--C---C---T-TTTTCSEEECCSSSTTCCC
T ss_pred --EEEEEccCCCccccCC---HHHHHHHHHHcCCEEEEEccccc-CCCC--c---c---h-hhcCccEEEECCCcccccC
Confidence 7778899999999998 67889999999999999999642 1110 0 1 1 111356788999997 467
Q ss_pred cCcceeEEEEeeCChhHHHHHHHHHHH
Q 018820 300 YGERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 300 ~G~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
+|+ ||++ ++ +++.+++..
T Consensus 212 ~G~--G~~~--~~-----~~~~~~~~~ 229 (393)
T 2huf_A 212 PGI--TPVS--FS-----HRAVERYKR 229 (393)
T ss_dssp SSC--EEEE--EC-----HHHHHHHHT
T ss_pred CCe--EEEE--EC-----HHHHHHHhh
Confidence 888 9987 76 445555544
No 118
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.84 E-value=8.6e-21 Score=181.13 Aligned_cols=158 Identities=12% Similarity=0.058 Sum_probs=122.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc-------------CCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY-------------HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLN 206 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~-------------~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d 206 (350)
+++|++ |+|+++|+.++... ... +||+|++++|+|..+...++..|++++.+|+ ++ ++.+|
T Consensus 86 ~~~i~~--~~ggt~a~~~~~~~--~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d 159 (397)
T 3f9t_A 86 DAYGHI--VSGGTEANLMALRC--IKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPI-KE-DYTID 159 (397)
T ss_dssp TCEEEE--ESCHHHHHHHHHHH--HHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECB-CT-TSSBC
T ss_pred CCCEEE--ecCcHHHHHHHHHH--HHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEee-CC-CCcCC
Confidence 678888 99999999885433 333 3899999999999999999999999999998 54 46789
Q ss_pred HHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch------HHHHH
Q 018820 207 FQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA------QSVRM 279 (350)
Q Consensus 207 ~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~------~~~~~ 279 (350)
++.+++.+++ .++ ++++++|+||||.+.+ +++|.++|++||+++|+||+|.++..+...+.. ... .
T Consensus 160 ~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~-~ 232 (397)
T 3f9t_A 160 EKFVKDAVEDYDVD---GIIGIAGTTELGTIDN---IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKF-D 232 (397)
T ss_dssp HHHHHHHHHHSCCC---EEEEEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCC-S
T ss_pred HHHHHHHHhhcCCe---EEEEECCCCCCCCCCC---HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccc-c
Confidence 9999999987 444 7777889999999976 677899999999999999999876543110000 000 0
Q ss_pred HhhcCCcEEEEeccccccCccCcceeEEEEeeCChh
Q 018820 280 FVADGGECFIAQSYAKNLGLYGERVGALSIVCKTAD 315 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~ 315 (350)
+ .. ...+++.|++|.++ +|.|+||++ ++++.
T Consensus 233 ~-~~-~~~~~~~s~~K~~~-~~~~~g~~~--~~~~~ 263 (397)
T 3f9t_A 233 F-SL-GVDSITIDPHKMGH-CPIPSGGIL--FKDIG 263 (397)
T ss_dssp G-GG-TCSEEECCTTTTTC-CCSSCEEEE--ESSGG
T ss_pred c-cc-cCCeEEEccccccC-CCCCceEEE--EeCHH
Confidence 1 11 34577899999775 888999988 77543
No 119
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.84 E-value=4.4e-20 Score=178.11 Aligned_cols=190 Identities=16% Similarity=0.139 Sum_probs=140.8
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH----HHHcCCe
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV----FTLAGLS 191 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~ 191 (350)
.....+|++.++++. |. + ++++ +.+|++|+.++ +.+.+.+||.|++++|+|..+... ++..|++
T Consensus 58 ~~~~~~l~~~la~~~-g~------~-~~i~--~~sG~~ai~~~--~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~ 125 (389)
T 3acz_A 58 NPTVEQFEEMVCSIE-GA------A-GSAA--FGSGMGAISSS--TLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIE 125 (389)
T ss_dssp CHHHHHHHHHHHHHH-TC------S-EEEE--ESSHHHHHHHH--HTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCE
T ss_pred ChHHHHHHHHHHHHh-CC------C-eEEE--eCCHHHHHHHH--HHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCE
Confidence 445678999999985 43 2 4555 67788999884 344467999999999999976665 5778999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
++.++. .|++.+++.++++ ..++++++|+||||.+++ +++|.++|+++|+++|+|++|..+....
T Consensus 126 ~~~v~~-------~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~-- 190 (389)
T 3acz_A 126 VDLIDT-------SDVEKVKAAWKPN---TKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK-- 190 (389)
T ss_dssp EEEECT-------TCHHHHHHTCCTT---EEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC--
T ss_pred EEEECC-------CCHHHHHHhcCCC---CeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC--
Confidence 988876 4889998888653 347888999999999997 6888999999999999999999876431
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
++ . ....+++.|+||.++.+|.|+ ||++ +++++ +.+++.........+.+...+.++...|
T Consensus 191 ----~~----~-~~~di~~~S~sK~~~~~~~~~~G~v~--~~~~~----~~~~l~~~~~~~g~~~~~~~~~~~~~~l 252 (389)
T 3acz_A 191 ----PL----E-LGADIALHSVSKYINGHGDVIGGVSS--AKTAE----DIATIKFYRKDAGSLMAPMDAFLCARGM 252 (389)
T ss_dssp ----GG----G-TTCSEEEEETTTTTTCSSCCCCEEEE--ESSHH----HHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_pred ----cc----c-cCCeEEEECChhhccCCCCceeEEEE--ECcHH----HHHHHHHHHHhcCCCCCHHHHHHHHcCc
Confidence 11 1 135688999999999999999 9887 77423 4444444443333445666666555444
No 120
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.84 E-value=6.6e-20 Score=176.17 Aligned_cols=190 Identities=16% Similarity=0.119 Sum_probs=139.4
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH----HHHcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV----FTLAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~ 190 (350)
+..+..+|++++++++ +. ++.|++ ++| ++|+.++. ...+.+||.|++++|+|...... ++..|+
T Consensus 50 ~~~~~~~l~~~la~~~-~~------~~~i~~--~sG-t~a~~~~~--~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 117 (386)
T 1cs1_A 50 GNPTRDVVQRALAELE-GG------AGAVLT--NTG-MSAIHLVT--TVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_dssp CCHHHHHHHHHHHHHH-TC------SEEEEE--SSH-HHHHHHHH--HHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSC
T ss_pred CCccHHHHHHHHHHHh-CC------CcEEEe--CCH-HHHHHHHH--HHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCC
Confidence 4567789999999986 33 245554 555 89998843 44478999999999999864443 367799
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.++. .|++.+++.++++++ ++++++|+||||.+++ +++|.++|+++|+++|+||+|..+....
T Consensus 118 ~~~~~~~-------~d~~~l~~~i~~~~~---~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~- 183 (386)
T 1cs1_A 118 RVLFVDQ-------GDEQALRAALAEKPK---LVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN- 183 (386)
T ss_dssp EEEEECT-------TCHHHHHHHHHTCCS---EEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-
T ss_pred EEEEeCC-------CCHHHHHHhhccCCc---EEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 9888876 289999999976544 7778999999999996 6788999999999999999999887541
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHH
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAI 346 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~ 346 (350)
+. . ....+++.|+||.++.+|.|+ ||++ +++++. .+.+.........+.+.+.+.++...
T Consensus 184 -----~~----~-~~~di~~~s~sK~~~~~~~~~~G~~~--~~~~~l----~~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
T 1cs1_A 184 -----PL----A-LGADLVLHSCTKYLNGHSDVVAGVVI--AKDPDV----VTELAWWANNIGVTGGAFDSYLLLRG 244 (386)
T ss_dssp -----GG----G-GTCSEEEEETTTTTTCSSCCCCEEEE--ESSHHH----HHHHHHHHHHHTCBCCHHHHHHHHHH
T ss_pred -----cc----c-cCceEEEEcCcccccCCCCceeEEEE--eCcHHH----HHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 11 1 135688999999999999998 9987 775433 33343333332334566666554433
No 121
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.84 E-value=1.4e-19 Score=176.28 Aligned_cols=213 Identities=14% Similarity=0.078 Sum_probs=145.2
Q ss_pred ccccHHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcC
Q 018820 90 PLVLNVVRKAEQQLVNDRSRVKEYLP--IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167 (350)
Q Consensus 90 p~~~~~v~~a~~~l~~~~~~~~~Y~p--~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~ 167 (350)
.+..+..+++.+.+.. ....+.|.. .....+|++.++++. |. +++++ ++||++|+.+ .+.+.+.+
T Consensus 53 t~~~~~~~~~~~~~~~-~~~~~~y~r~~~p~~~~l~~~la~~~-g~-------~~~~~--~~sG~~Ai~~--al~~l~~~ 119 (414)
T 3ndn_A 53 GYVYGSAAVAEKSFAG-ELDHYVYSRYGNPTVSVFEERLRLIE-GA-------PAAFA--TASGMAAVFT--SLGALLGA 119 (414)
T ss_dssp BBCCSSHHHHHHHHTT-SSCCCCBTTTCCHHHHHHHHHHHHHH-TC-------SEEEE--ESSHHHHHHH--HHHTTCCT
T ss_pred ceecCChHHHHHHHhC-CcCCcCcCCCCChHHHHHHHHHHHHH-CC-------CcEEE--ECCHHHHHHH--HHHHHhCC
Confidence 4445555555554432 222344532 233456777777764 42 35666 8899999987 44556789
Q ss_pred CCEEEEcCCCCCChHHHHH----HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHH
Q 018820 168 QRTIYIPQPTWGNHPKVFT----LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWE 243 (350)
Q Consensus 168 gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~ 243 (350)
||.|++++|+|..+...++ ..|++++.++. + |++.+++.++++++ +|++++|+||||.+.+ ++
T Consensus 120 Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~-~------d~~~l~~ai~~~t~---~v~le~p~NptG~~~~---l~ 186 (414)
T 3ndn_A 120 GDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG-D------DLSQWERALSVPTQ---AVFFETPSNPMQSLVD---IA 186 (414)
T ss_dssp TCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-T------CHHHHHHHTSSCCS---EEEEESSCTTTCCCCC---HH
T ss_pred CCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC-C------CHHHHHHhcCCCCe---EEEEECCCCCCCcccc---HH
Confidence 9999999999999877764 48999999877 2 89999999876554 7788999999999976 66
Q ss_pred HHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHH
Q 018820 244 RIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVES 322 (350)
Q Consensus 244 ~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~ 322 (350)
+|+++|+++|+++|+||+|....... + + ..+ ..+++.|+||.++.+| +|+||++ +++ ..+.
T Consensus 187 ~i~~la~~~g~~livDe~~~~~~~~~------~---~-~~g-~div~~S~sK~l~~~G~~~~G~vv--~~~-----~~~~ 248 (414)
T 3ndn_A 187 AVTELAHAAGAKVVLDNVFATPLLQQ------G---F-PLG-VDVVVYSGTKHIDGQGRVLGGAIL--GDR-----EYID 248 (414)
T ss_dssp HHHHHHHHTTCEEEEECTTTHHHHCC------C---G-GGT-CSEEEEETTTTTTCSSCCCCEEEE--ECH-----HHHT
T ss_pred HHHHHHHHcCCEEEEECCCcccccCC------c---h-hcC-CCeEeccCCccccCCCCceEEEEE--ECH-----HHHH
Confidence 88999999999999999997432111 1 1 112 3578999999999889 8999877 652 2222
Q ss_pred -HHHHhhcccccCCChhHHHHHHHH
Q 018820 323 -QVKLVIRPMYSNPPIHGASIVAAI 346 (350)
Q Consensus 323 -~l~~~~~~~~~~~~~~~q~i~~~~ 346 (350)
.++........+.+...+.++..-
T Consensus 249 ~~l~~~~~~~g~~~~~~~a~~~~~~ 273 (414)
T 3ndn_A 249 GPVQKLMRHTGPAMSAFNAWVLLKG 273 (414)
T ss_dssp THHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 333333333344555555554443
No 122
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.84 E-value=1.9e-20 Score=179.42 Aligned_cols=175 Identities=11% Similarity=-0.004 Sum_probs=129.2
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh--HHHHHHcCCeEE
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH--PKVFTLAGLSVK 193 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~ 193 (350)
..+..++|+++++++ |.+ +++|++ |+|+++++.++. .+.+.+||+|++++|+|+.+ ..+++..|++++
T Consensus 41 ~~~~~~l~~~la~~~-g~~-----~~~v~~--t~g~t~a~~~~~--~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~ 110 (392)
T 2z9v_A 41 QLLYEKVVDKAQKAM-RLS-----NKPVIL--HGEPVLGLEAAA--ASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLL 110 (392)
T ss_dssp HHHHHHHHHHHHHHT-TCS-----SCCEEE--SSCTHHHHHHHH--HHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEE
T ss_pred HHHHHHHHHHHHHHh-CCC-----CCEEEE--eCCchHHHHHHH--HHhcCCCCEEEEecCCcccHHHHHHHHHcCCceE
Confidence 346788999999984 432 578998 999999998854 44478999999999999765 344566899999
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
.+++ +++ +.+|++.+++.+++.+ +..++++++|+||||.+++ +++|.++|+++|+++|+|++|......
T Consensus 111 ~v~~-~~~-~~~d~~~l~~~l~~~~-~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~~----- 179 (392)
T 2z9v_A 111 EIEV-PYN-EAIDPQAVADMLKAHP-EITVVSVCHHDTPSGTINP---IDAIGALVSAHGAYLIVDAVSSFGGMK----- 179 (392)
T ss_dssp EEEC-CTT-SCCCHHHHHHHHHHCT-TCCEEEEESEEGGGTEECC---HHHHHHHHHHTTCEEEEECTTTBTTBS-----
T ss_pred EeeC-CCC-CCCCHHHHHHHHhcCC-CCcEEEEeccCCCCceecc---HHHHHHHHHHcCCeEEEEcccccCCcc-----
Confidence 9998 543 4699999999996421 2237788999999999998 568899999999999999998632110
Q ss_pred hHHHHHHhhcCCcEEEEecccccc-CccCcceeEEEEeeCChhHHHHHHHHHH
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNL-GLYGERVGALSIVCKTADVAGRVESQVK 325 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~~~~~~~~~~~~~l~ 325 (350)
.... .. ...+++.|+||.+ |.+| +||++ ++ +++.++++
T Consensus 180 -~~~~---~~-~~d~~~~s~sK~~~~~~g--~G~l~--~~-----~~~~~~l~ 218 (392)
T 2z9v_A 180 -THPE---DC-KADIYVTGPNKCLGAPPG--LTMMG--VS-----ERAWAKMK 218 (392)
T ss_dssp -CCGG---GG-TCSEEEECSSSTTCCCSC--CEEEE--EC-----HHHHHHHH
T ss_pred -cccc---cc-cceEEEecCcccccCCCc--eeEEE--EC-----HHHHHHhh
Confidence 0111 11 2457889999965 4445 49988 76 44555453
No 123
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.84 E-value=1.9e-20 Score=182.04 Aligned_cols=165 Identities=19% Similarity=0.178 Sum_probs=112.1
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH------hcCCCEEEEcCCCCCCh-----------
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR------HYHQRTIYIPQPTWGNH----------- 181 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~------~~~gd~Vlv~~P~y~~~----------- 181 (350)
..++|+++++++ |.+ +++|++ |+|+++++.++...+.. ..+||+|++++|+|..|
T Consensus 63 ~~~l~~~la~~~-g~~-----~~~v~~--~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~ 134 (432)
T 3a9z_A 63 INTARASLAKMI-GGK-----PQDIIF--TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHD 134 (432)
T ss_dssp HHHHHHHHHHHH-TCC-----GGGEEE--ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCH
T ss_pred HHHHHHHHHHHc-CCC-----cCeEEE--eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcch
Confidence 468999999985 432 578998 99999999885433310 14899999999999886
Q ss_pred ------HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcC--
Q 018820 182 ------PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKG-- 253 (350)
Q Consensus 182 ------~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~-- 253 (350)
....+..|++++.+|+ +++++.+|++.+++.+.++ ..++++++||||||.+++.+ +|.++|++++
T Consensus 135 s~~~~~~~~~~~~g~~v~~v~~-~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~~~---~i~~l~~~~~~~ 207 (432)
T 3a9z_A 135 SIRLPLEHLVEDQVAEVTFVPV-SKVNGQVEVEDILAAVRPT---TCLVTIMLANNETGVIMPIS---EISRRIKALNQI 207 (432)
T ss_dssp HHHHHHHHHHHTTSCEEEEECC-CTTTSSCCHHHHHHTCCTT---EEEEECCSBCTTTCBBCCHH---HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCcEEEEEec-CcccCCcCHHHHHHhccCC---ceEEEEECcccCcccccCHH---HHHHHHHhcCcc
Confidence 3334557999999998 5434578999999988643 45889999999999999965 5788899988
Q ss_pred --------cEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 254 --------LLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 254 --------~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
+++|+|++|..+... . .... .+.. +++.||||.+ |.|+||++ +++
T Consensus 208 ~~~~~~~~~~livDea~~~~~~~---~---~~~~---~~~d-~~~~s~~K~~---g~~~G~~~--~~~ 260 (432)
T 3a9z_A 208 RAASGLPRVLVHTDAAQALGKRR---V---DVED---LGVD-FLTIVGHKFY---GPRIGALY--VRG 260 (432)
T ss_dssp HHHHTCCCCEEEEECTTTTTTSC---C---CHHH---HCCS-EEEEEGGGTT---CCSCEEEE--ETT
T ss_pred cccccCCceEEEEEchhhhCCcc---c---Chhh---cCCC-EEEEehhHhc---CCcceEEE--Ecc
Confidence 999999999764321 1 1211 2234 4589999976 46799988 764
No 124
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.83 E-value=1.3e-19 Score=176.57 Aligned_cols=253 Identities=11% Similarity=0.030 Sum_probs=145.1
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...+|++.|.+...-|. .+..+++++.+.+. . . ..|.+..+..++++++++++..... ...++|++ |+||
T Consensus 28 g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~-~-~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~--~~gg 98 (430)
T 3i4j_A 28 GRRYLDGSSGALVANIGH-GRAEVGERMAAQAA-R-L--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWA--VSGG 98 (430)
T ss_dssp SCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHH-H-C--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEE--ESSH
T ss_pred CCEEEECCCchhccccCC-CCHHHHHHHHHHHH-h-c--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCcH
Confidence 456899998854233332 12334444444443 1 1 1243444555566666665321110 12578999 9999
Q ss_pred hhHHHHHHHHHHHh------cCCCEEEEcCCCCCChHHHHHHcCCe---------------EEEEEeecCC--CCCCCHH
Q 018820 152 TGSLRVGAEFLARH------YHQRTIYIPQPTWGNHPKVFTLAGLS---------------VKSYRYYDPA--TRGLNFQ 208 (350)
Q Consensus 152 ~~al~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~~---------------~~~v~~~~~~--~~~~d~~ 208 (350)
++|+..+...+... .+++.|++.+|+|..+.......+.. +..+|. +.. ....|++
T Consensus 99 ~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 177 (430)
T 3i4j_A 99 SEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPK-PDPARNGAEDAE 177 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECC-CCTTSCHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCC-CcccchhhHHHH
Confidence 99998864433222 34689999999999887655443332 222222 100 0112558
Q ss_pred HHHHHhhcCC-CCcEEEEecCCCC-CCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 209 GLLEDLGSAP-AGAIVLLHACAHN-PTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 209 ~l~~~l~~~~-~~~~~l~~~~p~N-PTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
.+++.+++.. ...++++++.++| |+|. .++++++++|.++|++||+++|+||+|.+|...+ + ......+.....
T Consensus 178 ~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g--~-~~~~~~~~~~~~ 254 (430)
T 3i4j_A 178 GLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCG--S-PLALSRWSGVTP 254 (430)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS--S-SSGGGGTTTCCC
T ss_pred HHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc--c-hhhhhhhcCCCC
Confidence 8888886422 2334555554556 8886 7788899999999999999999999999986543 1 112211101112
Q ss_pred cEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHh----hcccccCCChhHHHHHHHHhc
Q 018820 286 ECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLV----IRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+++ +|||.++ .| +|+||++ ++ +++++.+... ......+.+.++|.++...|+
T Consensus 255 di~---t~sK~l~-~G~~r~G~~~--~~-----~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 311 (430)
T 3i4j_A 255 DIA---VLGKGLA-AGYAPLAGLL--AA-----PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD 311 (430)
T ss_dssp SEE---EECGGGT-TTSSCCEEEE--EC-----HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHH
T ss_pred cEE---EEccccc-CCccccEEEE--EC-----HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHH
Confidence 333 6899999 59 9999988 76 5677777653 223334677888887776664
No 125
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.83 E-value=7.4e-20 Score=178.68 Aligned_cols=251 Identities=12% Similarity=0.018 Sum_probs=153.3
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccC-CcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRE-NRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~-~~v~~~~t~G 150 (350)
+...+||+.|.+...-|. .+..+++++.+.+. .. ..|....|..++++++++++..... ... ++|++ |+|
T Consensus 42 g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~--~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~~v~~--~~g 112 (439)
T 3dxv_A 42 GRELIDLSGAWGAASLGY-GHPAIVAAVSAAAA--NP--AGATILSASNAPAVTLAERLLASFP--GEGTHKIWF--GHS 112 (439)
T ss_dssp SCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHH--SC--SCSCSSSSEEHHHHHHHHHHHHTTT--CTTTEEEEE--ESS
T ss_pred CCEEEECCCchhhccCCC-CCHHHHHHHHHHHH--hc--cCccccccCCHHHHHHHHHHHHhCC--CCCCCEEEE--eCC
Confidence 456899999977333332 22333443444443 22 2355556667777777777433211 113 68988 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHc-CCeE--------------EEEEeecCCCCCC----CHHHHH
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLA-GLSV--------------KSYRYYDPATRGL----NFQGLL 211 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~~~--------------~~v~~~~~~~~~~----d~~~l~ 211 (350)
|++|+..+..+.....+++.|++.+|+|..+....... |... ..+|+ +....+. |++.++
T Consensus 113 gsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~le 191 (439)
T 3dxv_A 113 GSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPY-RPYRNDPTGDAILTLLT 191 (439)
T ss_dssp HHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSS-SCBTTBTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCC-CcccccccHHHHHHHHH
Confidence 99999886543222346688999999997665544333 3221 11222 1100111 689999
Q ss_pred HHhh-cCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 212 EDLG-SAPAGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 212 ~~l~-~~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
+.++ ..+.+.+++++.+++|++|.+. +++.+++|.++|++||+++|+||+|.+|...+ .. .....+ ....+++
T Consensus 192 ~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g--~~-~~~~~~-~~~~di~- 266 (439)
T 3dxv_A 192 EKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSG--RL-HCFEHE-GFVPDIL- 266 (439)
T ss_dssp HHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTS--SS-SGGGGT-TCCCSEE-
T ss_pred HHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc--hh-hHHHhc-CCCCCEE-
Confidence 9884 3334455777777888888865 45559999999999999999999999885432 10 111111 1222443
Q ss_pred EeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
||||.++ +|+|+||++ ++ +++++.+......... .+.+++.++...|+
T Consensus 267 --s~sK~~~-~G~riG~~~--~~-----~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~ 314 (439)
T 3dxv_A 267 --VLGKGLG-GGLPLSAVI--AP-----AEILDCASAFAMQTLH-GNPISAAAGLAVLE 314 (439)
T ss_dssp --EECGGGG-TTSCCEEEE--EE-----HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHH
T ss_pred --EEcchhc-CCcceEEEE--EC-----HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHH
Confidence 9999999 799999988 76 5666655543322233 67777776665553
No 126
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.83 E-value=2.3e-20 Score=176.18 Aligned_cols=214 Identities=15% Similarity=0.078 Sum_probs=145.5
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+++.|+|+.+.+ . + +.+.+.++..... ......|.+.....++++.+++++ |. +.+|++ |+|
T Consensus 5 ~~~~~id~~~~~~-~----~-~~~~v~~a~~~~~--~~~~~~~~~~~~~~~l~~~la~~~-g~------~~~v~~--~~~ 67 (356)
T 1v72_A 5 SRPPALGFSSDNI-A----G-ASPEVAQALVKHS--SGQAGPYGTDELTAQVKRKFCEIF-ER------DVEVFL--VPT 67 (356)
T ss_dssp -CCCCCBCSCGGG-C----C-CCHHHHHHHHHTT--SSCCCSTTCSHHHHHHHHHHHHHH-TS------CCEEEE--ESC
T ss_pred CCCceEeeccCCc-c----C-CCHHHHHHHHhhc--cCcccccccchHHHHHHHHHHHHh-CC------CCcEEE--eCC
Confidence 3567899998866 2 1 2455555555433 122245665556678888888874 41 456888 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH--HHHc--CCeEEEEEeecCCCCCCCHHHHHH-HhhcC----CCCc
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV--FTLA--GLSVKSYRYYDPATRGLNFQGLLE-DLGSA----PAGA 221 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~--~~~~--G~~~~~v~~~~~~~~~~d~~~l~~-~l~~~----~~~~ 221 (350)
+++++.++ +.....+||.|++++|+|..+... +... |++++.+|. + ++.+|++.+++ .+++. ..+.
T Consensus 68 gt~a~~~a--l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~~i~~~~~~~~~~~ 142 (356)
T 1v72_A 68 GTAANALC--LSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDG-P--AAKLDIVRLRERTREKVGDVHTTQP 142 (356)
T ss_dssp HHHHHHHH--HHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCC-G--GGCCCHHHHHHHTTSSTTCTTSCEE
T ss_pred ccHHHHHH--HHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecC-C--CCeEcHHHHHHHhhhcchhhccCCc
Confidence 99999884 444467999999999998765544 6666 999999887 4 36799999999 88641 1134
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCC--CCCCCchHHHHHHh-hcCCcEEEEeccccccC
Q 018820 222 IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFAS--GSLDSDAQSVRMFV-ADGGECFIAQSYAKNLG 298 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~--~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~g 298 (350)
.++++++||| ||.+++.+++++|+++|++||+++|+|++|..+.. .+ .. ...+. ..+..++ +.|+||. |
T Consensus 143 ~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~--~~---~~~~~~~~~~d~~-~~s~sK~-g 214 (356)
T 1v72_A 143 ACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLG--CS---PAEMTWKAGVDAL-SFGATKN-G 214 (356)
T ss_dssp EEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT--CC---TTTTTGGGTCCEE-EECCGGG-T
T ss_pred eEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCC--CC---HHHhhhhhcCCEE-EEecccC-C
Confidence 5777788887 99999999999999999999999999999975421 11 01 11110 1123444 4589997 3
Q ss_pred ccCccee--EEEEeeCChhHHHHH
Q 018820 299 LYGERVG--ALSIVCKTADVAGRV 320 (350)
Q Consensus 299 l~G~RvG--~l~~v~~~~~~~~~~ 320 (350)
.|+| |++ + +++..+++
T Consensus 215 ---~~~G~g~~~--~-~~~~~~~~ 232 (356)
T 1v72_A 215 ---VLAAEAIVL--F-NTSLATEM 232 (356)
T ss_dssp ---CSSCEEEEE--S-SGGGHHHH
T ss_pred ---CcCccEEEE--E-CHHHHhhH
Confidence 4777 544 5 55544443
No 127
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.83 E-value=3.7e-20 Score=179.68 Aligned_cols=191 Identities=13% Similarity=0.103 Sum_probs=140.3
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 190 (350)
+..+..+||++++++. |. ++.|++ ++ |++|+.++ +. ++.+||.|++++|+|......+ +..|+
T Consensus 65 ~~p~~~~l~~~la~~~-g~------~~~i~~--~s-G~~ai~~~--~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 131 (403)
T 3cog_A 65 GNPTRNCLEKAVAALD-GA------KYCLAF--AS-GLAATVTI--TH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGL 131 (403)
T ss_dssp -CHHHHHHHHHHHHHH-TC------SEEEEE--SC-HHHHHHHH--HT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred CCchHHHHHHHHHHHh-CC------CcEEEE--CC-HHHHHHHH--HH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCC
Confidence 4466789999999986 43 245654 55 46888874 33 5789999999999998754443 57899
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcC-cEEEEccCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKG-LLPFFDSAYQGFASGS 269 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~-~~ii~DeaY~~~~~~~ 269 (350)
+++.++. + |++.+++.++++ ..++++++|+||||.+++ +++|+++|+++| +++|+|++|..+.+..
T Consensus 132 ~v~~v~~-~------d~~~l~~~i~~~---t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~ 198 (403)
T 3cog_A 132 KISFVDC-S------KIKLLEAAITPE---TKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQR 198 (403)
T ss_dssp EEEEECT-T------SHHHHHHHCCTT---EEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCC
T ss_pred EEEEECC-C------CHHHHHHhcCcC---CeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCC
Confidence 9998876 2 789999888653 347888999999999997 788899999999 9999999999876531
Q ss_pred CCCchHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 270 LDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
++. ....+++.|+||.++.+|. |+||++ +++++. .+++.........+.+.+.+.++...|+
T Consensus 199 ------~~~-----~~~div~~S~sK~~~g~~~~~~G~v~--~~~~~l----~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 261 (403)
T 3cog_A 199 ------PLA-----LGADISMYSATKYMNGHSDVVMGLVS--VNCESL----HNRLRFLQNSLGAVPSPIDCYLCNRGLK 261 (403)
T ss_dssp ------TTT-----TTCSEEEEETTTTTTCSSCCCCEEEE--ECCHHH----HHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred ------ccc-----cCCeEEEEcChhhccCCCCCeEEEEE--ECcHHH----HHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 111 1356899999999998775 799988 766543 3444444433344566777777655543
No 128
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.83 E-value=1.9e-20 Score=178.45 Aligned_cols=164 Identities=18% Similarity=0.169 Sum_probs=126.6
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh----cCCCEEEEcCCCCCChHHHHH---HcC
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH----YHQRTIYIPQPTWGNHPKVFT---LAG 189 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~----~~gd~Vlv~~P~y~~~~~~~~---~~G 189 (350)
.+..++|+++++++ |.+ +++|++ |+|+++|+.++.. ++. .+||.|++++|+|+.+...++ ..|
T Consensus 43 ~~~~~l~~~la~~~-g~~-----~~~v~~--~~g~t~a~~~~~~--~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g 112 (382)
T 4eb5_A 43 EAVQEAREKVAKLV-NGG-----GGTVVF--TSGATEANNLAII--GYAMRNARKGKHILVSAVEHMSVINPAKFLQKQG 112 (382)
T ss_dssp HHHHHHHHHHHHHH-TCT-----TEEEEE--ESSHHHHHHHHHH--HHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHh-CCC-----CCeEEE--cCchHHHHHHHHH--HHHhhccCCCCEEEECCCcchHHHHHHHHHHhCC
Confidence 46788999999985 432 568888 9999999988543 334 789999999999998876665 379
Q ss_pred CeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCC
Q 018820 190 LSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGS 269 (350)
Q Consensus 190 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~ 269 (350)
++++.+++ ++ ++.+|++.+++.++++ ..++++++|+||||.+++ +++|+++|+++|++ |+|++|. + +.
T Consensus 113 ~~~~~v~~-~~-~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~-~--g~ 180 (382)
T 4eb5_A 113 FEVEYIPV-GK-YGEVDVSFIDQKLRDD---TILVSVQHANNEIGTIQP---VEEISEVLAGKAAL-HIDATAS-V--GQ 180 (382)
T ss_dssp CEEEEECB-CT-TSCBCHHHHHHHCCTT---EEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE-EEECTTT-B--TT
T ss_pred cEEEEecc-CC-CCccCHHHHHHHhcCC---CeEEEEeccCCCccccCC---HHHHHHHHHHCCCE-EEEcchh-c--CC
Confidence 99999998 54 4679999999988653 348889999999999998 56889999999999 9999997 2 21
Q ss_pred CCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 270 LDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
.. ..+..+ ...+++.||||.+|.+| +||++ +++
T Consensus 181 --~~-~~~~~~----~~di~~~s~sK~~g~~g--~G~~~--~~~ 213 (382)
T 4eb5_A 181 --IE-VDVEKI----GADMLTISSNDIYGPKG--VGALW--IRK 213 (382)
T ss_dssp --BC-CCHHHH----TCSEEEEETGGGTCCSS--CEEEE--EET
T ss_pred --cc-cCcccc----CCCEEEeehHHhcCCCc--eEEEE--Ecc
Confidence 10 111111 24588999999988666 78877 654
No 129
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.83 E-value=2.3e-19 Score=174.63 Aligned_cols=240 Identities=12% Similarity=0.074 Sum_probs=149.8
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSR-VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~-~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+...+||+.|...+.-|. ..+.+.++.......... ...| +..-..+|++.++++. | .++|++ |+
T Consensus 55 ~g~~~lD~~~~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~v~~--~~ 121 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGH--CHPALVEALKSQGETLWHTSNVF-TNEPALRLGRKLIDAT-F-------AERVLF--MN 121 (420)
T ss_dssp TCCEEEESSHHHHTCTTCB--TCHHHHHHHHHHHTTCCCCCTTS-CCHHHHHHHHHHHHHS-S-------CSEEEE--ES
T ss_pred CCCEEEEccccccccccCC--CCHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC-C-------CCeEEE--eC
Confidence 3456899998843122222 234444444443311111 1113 2223345555555552 2 468988 99
Q ss_pred CchhHHHHHHHHHHHhc-----CC-CEEEEcCCCCCChHH-HHHHcCCe------------EEEEEeecCCCCCCCHHHH
Q 018820 150 SGTGSLRVGAEFLARHY-----HQ-RTIYIPQPTWGNHPK-VFTLAGLS------------VKSYRYYDPATRGLNFQGL 210 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~-----~g-d~Vlv~~P~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~~d~~~l 210 (350)
||++|+.++...+.... +| +.|++++|+|..+.. .+...|.+ +..+|+ .|++.+
T Consensus 122 ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l 194 (420)
T 2pb2_A 122 SGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAV 194 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHH
Confidence 99999988654332110 66 589999999987754 44555543 444443 389999
Q ss_pred HHHhhcCCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 211 LEDLGSAPAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 211 ~~~l~~~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
++.+++ +..+++++.++||+|+ +++.+++++|.++|++||+++|+||+|.+|.+.+ +. .....+ ....+++
T Consensus 195 e~~i~~---~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g--~~-~~~~~~-~~~~dii- 266 (420)
T 2pb2_A 195 KAVMDD---HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTG--DL-FAYMHY-GVTPDIL- 266 (420)
T ss_dssp HHHCCT---TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS--SS-SHHHHH-TCCCSEE-
T ss_pred HHHhcc---CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCC--cH-HHHHhc-CCCCCeE-
Confidence 998864 3447777778888884 6999999999999999999999999998886543 11 122222 2223554
Q ss_pred EeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
||||.++ +|+|+||++ ++ +++.+.+.........+.+.+++.++...|+
T Consensus 267 --t~sK~l~-~G~~iG~~~--~~-----~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~ 315 (420)
T 2pb2_A 267 --TSAKALG-GGFPVSAML--TT-----QEIASAFHVGSHGSTYGGNPLACAVAGAAFD 315 (420)
T ss_dssp --EECGGGG-TTSCCEEEE--EC-----HHHHTTCC----CCEECCCHHHHHHHHHHHH
T ss_pred --Eeccccc-CCCceEEEE--Eh-----HHHHHhhcCCCcCcccCcCHHHHHHHHHHHH
Confidence 7899999 999999988 76 3454444332222334567777777666553
No 130
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.83 E-value=1.6e-20 Score=177.55 Aligned_cols=200 Identities=14% Similarity=0.026 Sum_probs=140.4
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC-C-CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP-I-VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p-~-~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
++++|+.| | . + +.+.+.++... ...+.|.. . .+..++|+++++++ |.. ...+++++ |+|+
T Consensus 4 ~~~~~~~g-p-~----~-~~~~v~~a~~~-----~~~~~~~~~~~~~~~~l~~~la~~~-g~~---~~~~~v~~--~~g~ 65 (366)
T 1m32_A 4 NYLLLTPG-P-L----T-TSRTVKEAMLF-----DSCTWDDDYNIGVVEQIRQQLTALA-TAS---EGYTSVLL--QGSG 65 (366)
T ss_dssp -CEECSSS-S-C----C-CCHHHHHTTCC-----CCCTTSHHHHTTTHHHHHHHHHHHH-CSS---SSEEEEEE--ESCH
T ss_pred ccccccCC-C-c----C-CCHHHHHHHhh-----hhcCCCHHHHHHHHHHHHHHHHHHh-CCC---CcCcEEEE--ecCh
Confidence 36889999 5 2 1 23444444322 11232321 1 67899999999996 421 11357888 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcC-CCCCC-hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCC
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQ-PTWGN-HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACA 229 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~-P~y~~-~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p 229 (350)
++|+.++ +.+...+||.|++++ |+|+. +..+++..|++++.++. +. ++.+|++.+++.+++.++ ..++++++|
T Consensus 66 t~a~~~~--~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~l~~~~~-~~~v~~~~~ 140 (366)
T 1m32_A 66 SYAVEAV--LGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDC-GE-VARPDVQAIDAILNADPT-ISHIAMVHS 140 (366)
T ss_dssp HHHHHHH--HHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEEC-CT-TSCCCHHHHHHHHHHCTT-CCEEEEESE
T ss_pred HHHHHHH--HHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeC-CC-CCCCCHHHHHHHHhcCCC-eEEEEEecc
Confidence 9999884 444467899887765 56653 66777888999999998 44 456999999999976422 236778899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
+||||.+++ +++|+++|+++|+++|+||+|...... .+ + ......+++.|+||.++ .+.++||++
T Consensus 141 ~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~---~~------~-~~~~~di~~~s~~K~~~-~~~g~G~~~- 205 (366)
T 1m32_A 141 ETTTGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGIP---MD------I-AALHIDYLISSANKCIQ-GVPGFAFVI- 205 (366)
T ss_dssp ETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTSC---CC------T-TTTTCSEEEEESSSTTC-CCSSEEEEE-
T ss_pred cCCcceecC---HHHHHHHHHHcCCEEEEECCccccCcC---cc------c-cccCccEEEecCccccc-CCCceEEEE-
Confidence 999999998 678899999999999999999754321 01 1 11124688999999874 345679988
Q ss_pred eeC
Q 018820 310 VCK 312 (350)
Q Consensus 310 v~~ 312 (350)
++
T Consensus 206 -~~ 207 (366)
T 1m32_A 206 -AR 207 (366)
T ss_dssp -EE
T ss_pred -EC
Confidence 76
No 131
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.83 E-value=3.1e-19 Score=172.41 Aligned_cols=192 Identities=14% Similarity=0.091 Sum_probs=143.9
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~ 190 (350)
+.....+|++.++++. |. +++++ ++||++|+.++ +...+.+||+|++++|+|+.+...+ +..|+
T Consensus 64 ~~~~~~~l~~~la~~~-g~-------~~~~~--~~sGt~A~~~a--l~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~ 131 (392)
T 3qhx_A 64 GNPTRTALEAALAAVE-DA-------AFGRA--FSSGMAAADCA--LRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNV 131 (392)
T ss_dssp CCHHHHHHHHHHHHHT-TC-------SEEEE--ESSHHHHHHHH--HHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTC
T ss_pred CChHHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCc
Confidence 3445678999999884 32 25666 88999999884 4455789999999999998777766 67899
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.++. .|++.+++.+++. ..++++++|+||||.+.+ +++|+++|+++|+++|+|++|..+....
T Consensus 132 ~~~~v~~-------~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~- 197 (392)
T 3qhx_A 132 EYTPVAL-------ADLDAVRAAIRPT---TRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ- 197 (392)
T ss_dssp EEEEECT-------TCHHHHHHHCCTT---EEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC-
T ss_pred EEEEeCC-------CCHHHHHHhhCCC---CeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 9988876 2899999988753 447888999999999987 7888999999999999999998654321
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+. .. ...+++.|+||.+|.+| .|+||++ +++++. ...+.........+++.+.+.++...++
T Consensus 198 -----~~----~~-~~di~~~S~sK~lg~~g~~~~G~v~--~~~~~~----~~~l~~~~~~~g~~~~~~~~~~~~~~l~ 260 (392)
T 3qhx_A 198 -----PL----SL-GADVVLHSTTKYIGGHSDVVGGALV--TNDEEL----DQSFAFLQNGAGAVPGPFDAYLTMRGLK 260 (392)
T ss_dssp -----GG----GG-TCSEEEEETTTTTTCSSCCCCEEEE--ESCHHH----HHHHHHHHHHHCCCCCHHHHHHHHHHHT
T ss_pred -----hH----Hh-CCcEEEEcCccccCCCCCceEEEEE--ECcHHH----HHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence 11 11 23588999999999877 7999988 776543 3444444443445667777777666554
No 132
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.83 E-value=1.9e-19 Score=175.37 Aligned_cols=250 Identities=11% Similarity=0.067 Sum_probs=146.3
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...+|+..|.+...-|. .+..++++..+.+.........| +.....+|++.++++ ++.+ .++|++ |+|+
T Consensus 42 g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~-~~~~-----~~~v~~--~~gg 111 (433)
T 1zod_A 42 GRAILDFTSGQMSAVLGH-CHPEIVSVIGEYAGKLDHLFSEM-LSRPVVDLATRLANI-TPPG-----LDRALL--LSTG 111 (433)
T ss_dssp CCEEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCCCCCTTC-CCHHHHHHHHHHHHH-SCTT-----CCEEEE--ESCH
T ss_pred CCEEEEcccchhccccCC-CCHHHHHHHHHHHHhCccccccc-CCHHHHHHHHHHHHh-CCCC-----cCEEEE--eCch
Confidence 445789987764222231 12333333333333111111223 222345666666665 3322 578999 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH--------------cCCeEEEEEeecCCCCC--------CCHHH
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL--------------AGLSVKSYRYYDPATRG--------LNFQG 209 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~--------------~G~~~~~v~~~~~~~~~--------~d~~~ 209 (350)
++|+..+.........++.|++.+|+|..+...... .|+..+++|......++ +|++.
T Consensus 112 ~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~ 191 (433)
T 1zod_A 112 AESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDY 191 (433)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHH
Confidence 999988654321123458999999999876543321 13333333220000111 36899
Q ss_pred HHHHhhcCC-CCcEEEEecCC-CCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCc
Q 018820 210 LLEDLGSAP-AGAIVLLHACA-HNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGE 286 (350)
Q Consensus 210 l~~~l~~~~-~~~~~l~~~~p-~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~ 286 (350)
+++.+++.. .+..+++ ++| +||||. .++++++++|.++|++||+++|+||+|.+|...+ .. .....+ .....
T Consensus 192 le~~l~~~~~~~~~~vi-~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g--~~-~~~~~~-~~~~d 266 (433)
T 1zod_A 192 AFDLIDRQSSGNLAAFI-AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG--TM-FACQRD-GVTPD 266 (433)
T ss_dssp HHHHHHHHCCSCEEEEE-ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-STHHHH-TCCCS
T ss_pred HHHHHHhcCCCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc--hH-hHHhhc-CCCCC
Confidence 998886421 2233444 455 588996 6789999999999999999999999999986432 11 111222 21223
Q ss_pred EEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh--hcccccCCChhHHHHHHHHh
Q 018820 287 CFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV--IRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 287 vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~i~~~~L 347 (350)
+.||||.|+. |+|+||++ ++ +++++.+... ......+.+.+++.++...|
T Consensus 267 ---i~s~sK~~~~-G~~ig~~~--~~-----~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal 318 (433)
T 1zod_A 267 ---ILTLSKTLGA-GLPLAAIV--TS-----AAIEERAHELGYLFYTTHVSDPLPAAVGLRVL 318 (433)
T ss_dssp ---EEEECHHHHT-TSSCEEEE--EC-----HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHH
T ss_pred ---EEEecccccC-CCCeeEEE--Eh-----HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence 3489999995 99999988 76 4555555542 12133456777776665554
No 133
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.82 E-value=2.2e-19 Score=175.06 Aligned_cols=248 Identities=14% Similarity=0.096 Sum_probs=150.1
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...+|+..|..-..-|. .+..+++++.+.+. ......| +.....+|+++++++. + + .++|++ ++|
T Consensus 53 ~g~~ylD~~~~~~~~~lG~-~~p~v~~a~~~~~~--~~~~~~~-~~~~~~~l~~~la~~~-~-~-----~~~v~~--~~s 119 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGH-AHPHITKAITTAAE--NGVLYGT-PTALEVKFAKMLKEAM-P-A-----LDKVRF--VNS 119 (434)
T ss_dssp TCCEEEECCGGGTTCSSCB-TCHHHHHHHHHHHH--HCSCCSS-CCHHHHHHHHHHHHHC-T-T-----CSEEEE--ESS
T ss_pred CCCEEEECCCchhccccCC-CCHHHHHHHHHHHH--hCcCCCC-CCHHHHHHHHHHHHhC-C-C-----CCEEEE--eCc
Confidence 3556899998864223332 22333333344444 1222334 5556678888888874 2 1 578999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHc-CCeEEEEEeecCCCCC-------------CCHHHHHHHhhc
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLA-GLSVKSYRYYDPATRG-------------LNFQGLLEDLGS 216 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~~~~~v~~~~~~~~~-------------~d~~~l~~~l~~ 216 (350)
|++++..+..+.....+++.|++.+|+|..+....... |.....+.. ...... .|++.+++.+++
T Consensus 120 Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 198 (434)
T 3l44_A 120 GTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGT-PDSAGVPQSIAQEVITVPFNNVETLKEALDK 198 (434)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCC-BSSTTCCHHHHTTEEEECTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCC-CCcCCCCCcCCCceEecCcccHHHHHHHHHh
Confidence 99999886544322346789999999998765433322 211111111 000000 188999998875
Q ss_pred CCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecccc
Q 018820 217 APAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAK 295 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 295 (350)
.+.+.++++++.++|++|.. ++++.+++|.++|++||+++|+||+|.+|..+ .. .....+ ..... +.+|||
T Consensus 199 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g---~~-~~~~~~-~~~~d---i~t~sK 270 (434)
T 3l44_A 199 WGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFM---YG-GAQDLL-GVTPD---LTALGK 270 (434)
T ss_dssp HGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSS---SS-CHHHHH-TCCCS---EEEEEG
T ss_pred CCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceecc---cc-HHHHHc-CCCCC---eeehhh
Confidence 33333455544444455554 48999999999999999999999999999332 11 122222 11122 457999
Q ss_pred ccCccCcceeEEEEeeCChhHHHHHHHHHHHh---hcccccCCChhHHHHHHHHhc
Q 018820 296 NLGLYGERVGALSIVCKTADVAGRVESQVKLV---IRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 296 ~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.++ +|+|+||++ ++ +++++.+... ......+.+.+++.++...|+
T Consensus 271 ~~~-~G~~iG~~~--~~-----~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~ 318 (434)
T 3l44_A 271 VIG-GGLPIGAYG--GK-----KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLE 318 (434)
T ss_dssp GGG-TTSSCEEEE--EC-----HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred hhc-CCcCeeeEE--Ec-----HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 999 899999986 76 5666655442 122234567777776665554
No 134
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.82 E-value=5.6e-20 Score=173.21 Aligned_cols=162 Identities=15% Similarity=0.045 Sum_probs=120.8
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH--HHHHHcCCeEEE
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP--KVFTLAGLSVKS 194 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~--~~~~~~G~~~~~ 194 (350)
.+..++|+++++++ |.+ ++++++ |+|+++++.++ +.+.+.+||+|++++|+|+.+. .+++..|++++.
T Consensus 34 ~~~~~l~~~la~~~-g~~-----~~~i~~--~~g~t~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~ 103 (352)
T 1iug_A 34 EVFLKARGLLREAF-RTE-----GEVLIL--TGSGTLAMEAL--VKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVER 103 (352)
T ss_dssp HHHHHHHHHHHHHH-TCS-----SEEEEE--ESCHHHHHHHH--HHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHh-CCC-----CceEEE--cCchHHHHHHH--HHhccCCCCeEEEEeCCchhHHHHHHHHHcCCceEE
Confidence 46789999999985 432 578888 99999999884 4445789999999999998865 445678999999
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc--CcEEEEccCCCCCCCCCCCC
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK--GLLPFFDSAYQGFASGSLDS 272 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~DeaY~~~~~~~~~~ 272 (350)
+++ ++ ++.+|++.+++ .++ .++++++||||||.+++ +++|.++|+++ |+++|+|++|..-. .. .
T Consensus 104 v~~-~~-~~~~d~~~l~~---~~~---~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~D~a~~~~~-~~--~ 169 (352)
T 1iug_A 104 LDY-PY-GDTPRPEDVAK---EGY---AGLLLVHSETSTGALAD---LPALARAFKEKNPEGLVGADMVTSLLV-GE--V 169 (352)
T ss_dssp EEC-CT-TCCCCTTTSCC---SSC---SEEEEESEETTTTEECC---HHHHHHHHHHHCTTCEEEEECTTTBTT-BC--C
T ss_pred EeC-CC-CCCCCHHHHhc---cCC---cEEEEEEecCCcceecC---HHHHHHHHHhhCCCCEEEEECCccccC-cc--e
Confidence 998 54 34678877766 222 37788999999999998 56889999999 99999999986211 10 0
Q ss_pred chHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 273 DAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
+ .. .. ...+++.|+||.++ .+.++||++ ++
T Consensus 170 ~---~~---~~-~~d~~~~s~~K~~~-~~~g~G~~~--~~ 199 (352)
T 1iug_A 170 A---LE---AM-GVDAAASGSQKGLM-CPPGLGFVA--LS 199 (352)
T ss_dssp C---SG---GG-TCSEEEEESSSTTC-CCSCEEEEE--EC
T ss_pred e---cc---cc-CeeEEEecCccccc-CCCceeEEE--EC
Confidence 1 11 11 24577899999554 224589987 65
No 135
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.82 E-value=2.5e-19 Score=174.15 Aligned_cols=248 Identities=13% Similarity=0.103 Sum_probs=146.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSR--VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~--~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
+...+|++.|.+...-|+..+..+++++.+.+. .... ...| +..-..++++.++++ ++.+ . +++|++ |+
T Consensus 41 g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~-~~~~~~~~~~-~~~~~~~l~~~la~~-~~~~---~-~~~v~~--~~ 111 (419)
T 2eo5_A 41 GNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQ-KLAHAAANDF-YNIPQLELAKKLVTY-SPGN---F-QKKVFF--SN 111 (419)
T ss_dssp SCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHT-TSCCCSCSCS-CCHHHHHHHHHHHHH-SSCS---S-CEEEEE--ES
T ss_pred CCEEEEccCChhhhccCCCCCHHHHHHHHHHHh-hCcccccccc-CCHHHHHHHHHHHHh-CCCC---c-CCEEEE--eC
Confidence 456899998874212222112344444334443 1110 0113 222235566666665 3432 1 468999 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcC-------------CeEEEEEeecCC---CCC--------
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAG-------------LSVKSYRYYDPA---TRG-------- 204 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G-------------~~~~~v~~~~~~---~~~-------- 204 (350)
|+++++.++.... ...+||.|++++|+|..+... ....| ..++.+|+ +.+ .++
T Consensus 112 gg~ea~~~ai~~~-~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~g~~~~~~~~ 189 (419)
T 2eo5_A 112 SGTEAIEASIKVV-KNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPY-PNPYRNPWHINGYENPS 189 (419)
T ss_dssp SHHHHHHHHHHHH-HTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECC-CCSSSCTTCCCTTTCHH
T ss_pred chHHHHHHHHHHH-HHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECC-Cccccccccccccccch
Confidence 9999998854332 122489999999999865443 22221 25677776 321 012
Q ss_pred ----CCHHHHH-HHhhcCC--CCcEEEEecCCC-CCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 205 ----LNFQGLL-EDLGSAP--AGAIVLLHACAH-NPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 205 ----~d~~~l~-~~l~~~~--~~~~~l~~~~p~-NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
+|++.++ +.+++.. .+.++ ++++|+ ||||. .++++++++|.++|++||+++|+||+|.+|...+ .. .
T Consensus 190 ~~~~~~~~~l~~~~i~~~~~~~~~~~-vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g--~~-~ 265 (419)
T 2eo5_A 190 ELVNRVIEFIEDYIFVNLVPPEEVAG-IFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTG--KL-F 265 (419)
T ss_dssp HHHHHHHHHHHHTHHHHTCCGGGEEE-EEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-S
T ss_pred hhHHHHHHHHHHHHHhhccCCCCEEE-EEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCc--ch-h
Confidence 3678888 8776421 22334 445665 57896 7789999999999999999999999999986543 11 1
Q ss_pred HHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
....+ ....+++ ||||.|+ .| +|+||++ +++ +++ .+...... ..+.+.++|.++...|+
T Consensus 266 ~~~~~-~~~~d~~---t~sK~~~-~G~~riG~~~--~~~-----~~~-~~~~~~~~-t~~~n~~~~~aa~aal~ 325 (419)
T 2eo5_A 266 AIENF-NTVPDVI---TLAKALG-GGIMPIGATI--FRK-----DLD-FKPGMHSN-TFGGNALACAIGSKVID 325 (419)
T ss_dssp GGGGG-TCCCSEE---EECGGGG-TTTSCCEEEE--EEG-----GGC-CC-------CCCCCHHHHHHHHHHHH
T ss_pred hHHhc-CCCCCEE---Eeccccc-CCccceEEEE--Ech-----Hhh-cCCcccCC-CCCCCHHHHHHHHHHHH
Confidence 11111 2223443 8999999 59 9999988 662 233 33112222 34567778877766654
No 136
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.82 E-value=6e-19 Score=171.71 Aligned_cols=250 Identities=10% Similarity=0.004 Sum_probs=151.0
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSR--VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~--~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
+...+|+..+.+...-|. . .+.+.++.......... ...|. .....++++.+++++ +. .+++|++ |+
T Consensus 42 g~~ylD~~~~~~~~~lg~-~-~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~-~~-----~~~~v~~--~~ 110 (429)
T 1s0a_A 42 GRRLVDGMSSWWAAIHGY-N-HPQLNAAMKSQIDAMSHVMFGGIT-HAPAIELCRKLVAMT-PQ-----PLECVFL--AD 110 (429)
T ss_dssp SCEEEESSTTTTTCTTCB-S-CHHHHHHHHHHHHHCSCCCCSSEE-CHHHHHHHHHHHHHS-CT-----TCCEEEE--ES
T ss_pred CCEEEEcCccHhhccCCC-C-CHHHHHHHHHHHHhcccccccccC-CHHHHHHHHHHHHhC-CC-----CCCEEEE--eC
Confidence 445789988864222332 2 34444443333211111 11342 223467777777763 32 2679999 99
Q ss_pred CchhHHHHHHHHHHH-hc----CCCEEEEcCCCCCChHHHHH-HcC-------------CeEEEEEee-c--CCCC-CCC
Q 018820 150 SGTGSLRVGAEFLAR-HY----HQRTIYIPQPTWGNHPKVFT-LAG-------------LSVKSYRYY-D--PATR-GLN 206 (350)
Q Consensus 150 G~~~al~l~~~l~~~-~~----~gd~Vlv~~P~y~~~~~~~~-~~G-------------~~~~~v~~~-~--~~~~-~~d 206 (350)
|+++|+.++...+.. .. |||.|++++|+|..+..... ..| ..++.++.. . .+.+ .+|
T Consensus 111 ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 190 (429)
T 1s0a_A 111 SGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERD 190 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGG
T ss_pred CHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHH
Confidence 999999886543211 22 58999999999988754332 211 123444441 1 1123 479
Q ss_pred HHHHHHHhhcCCCCcEEEEecCC--CCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc
Q 018820 207 FQGLLEDLGSAPAGAIVLLHACA--HNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD 283 (350)
Q Consensus 207 ~~~l~~~l~~~~~~~~~l~~~~p--~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~ 283 (350)
++.+++.+++.+.+.++++ ++| |||||. .++++++++|+++|++||+++|+||+|.+|...+ .. .....+ ..
T Consensus 191 ~~~l~~~l~~~~~~~~~vi-~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g--~~-~~~~~~-~~ 265 (429)
T 1s0a_A 191 MVGFARLMAAHRHEIAAVI-IEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTG--KL-FACEHA-EI 265 (429)
T ss_dssp GHHHHHHHHHHTTTEEEEE-ECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-SGGGGG-TC
T ss_pred HHHHHHHHHhCCCCEEEEE-EeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccc--hH-HHhhhc-CC
Confidence 9999998874322333444 556 699996 6688999999999999999999999999886432 11 111111 12
Q ss_pred CCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHh-----hcccccCCChhHHHHHHHHhc
Q 018820 284 GGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLV-----IRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 284 ~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~q~i~~~~L~ 348 (350)
..+++ ||||.++ .| +|+||++ ++ +++++.+... ......+++.+++.++...|+
T Consensus 266 ~~d~~---t~sK~l~-~G~~~iG~~~--~~-----~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~ 325 (429)
T 1s0a_A 266 APDIL---CLGKALT-GGTMTLSATL--TT-----REVAETISNGEAGCFMHGPTFMGNPLACAAANASLA 325 (429)
T ss_dssp CCSEE---EECGGGG-TSSSCCEEEE--EC-----HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred CCCEE---Eeccccc-CCCccceEEE--eC-----HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHH
Confidence 23433 7999998 68 9999988 76 4555555542 122233566777766665553
No 137
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.82 E-value=2.4e-20 Score=177.66 Aligned_cols=167 Identities=16% Similarity=0.065 Sum_probs=127.4
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC--hHHHHHHcCCeEEE
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN--HPKVFTLAGLSVKS 194 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~~~~G~~~~~ 194 (350)
....++|+.+++++ |.+.+ .++|++ |+|+++++. +. .+.+.+||+|++++|+|.. +..+++..|++++.
T Consensus 35 ~~~~~~~~~la~~~-~~~~~---~~~v~~--~~g~t~al~-~~--~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~ 105 (384)
T 3zrp_A 35 EALAYSLKGLRYVM-GASKN---YQPLII--PGGGTSAME-SV--TSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKV 105 (384)
T ss_dssp HHHHHHHHHHHHHH-TCCTT---SEEEEE--ESCHHHHHH-HG--GGGCCTTCEEEEECSSHHHHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHHHHHHh-CCCCC---CcEEEE--cCCcHHHHH-HH--HhhcCCCCEEEEecCCcchHHHHHHHHHcCCcEEE
Confidence 45677888888875 54321 378988 999999998 53 3447899999999999854 55667788999999
Q ss_pred EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 195 YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
+++ +. ++.+|++.+++.+++. +..++++++||||||.+++ +++|.++|++||+++|+|++|...... .+
T Consensus 106 v~~-~~-~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~~- 174 (384)
T 3zrp_A 106 LRP-SP-GDYVKPGEVEEEVRKS--EYKLVALTHVETSTGVREP---VKDVINKIRKYVELIVVDGVSSVGAEE---VK- 174 (384)
T ss_dssp ECC-ST-TCCCCHHHHHHHHHHS--CEEEEEEESEETTTTEECC---HHHHHHHHGGGEEEEEEECTTTTTTSC---CC-
T ss_pred ecC-CC-CCCCCHHHHHHHHHhC--CCcEEEEeCCCCCCceECc---HHHHHHHHHhcCCEEEEECcccccCcc---cc-
Confidence 998 54 4578999999999762 2348888999999999998 677899999999999999998744321 01
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
. ......+++.|+||.++ .+.++||++ ++
T Consensus 175 --~----~~~~~d~~~~s~~K~~~-~~~g~g~~~--~~ 203 (384)
T 3zrp_A 175 --A----EEWNVDVYLTASQKALG-SAAGLGLLL--LS 203 (384)
T ss_dssp --T----TTTTCSEEEEETTSTTC-CCSSEEEEE--EC
T ss_pred --c----cccCCCEEEecCccccc-CCCceEEEE--EC
Confidence 1 11134688999999985 345599877 65
No 138
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.82 E-value=1.2e-19 Score=178.37 Aligned_cols=190 Identities=11% Similarity=0.172 Sum_probs=135.5
Q ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhc----CCCE---EEEcCCCCCChHH
Q 018820 111 KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY----HQRT---IYIPQPTWGNHPK 183 (350)
Q Consensus 111 ~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~----~gd~---Vlv~~P~y~~~~~ 183 (350)
..|.+..|..+||+++++++ +. ++|++ |+||++|+.++. ..... +||. |+++.|.|..+..
T Consensus 70 ~~y~~~~~~~~l~~~la~~~-~~-------~~v~~--t~ggt~A~~~al--~~~~~~~~~~Gd~~~~viv~~~~~~~~~~ 137 (467)
T 1ax4_A 70 EAYAGSRNYYDLKDKAKELF-NY-------DYIIP--AHQGRGAENILF--PVLLKYKQKEGKAKNPVFISNFHFDTTAA 137 (467)
T ss_dssp CCSSSCHHHHHHHHHHHHHH-CC-------CEEEE--ESSHHHHHHHHH--HHHHHHHHHTTCCSSCEEEESSCCHHHHH
T ss_pred cccccCccHHHHHHHHHHHc-CC-------CcEEE--cCCcHHHHHHHH--HHHHHhhccCCCccceEEEeccccchhhH
Confidence 35888889999999999986 32 47888 999999998854 33455 8998 8888888888888
Q ss_pred HHHHcCCeEEEEEeec---C-----CCCCCCHHHHHHHhhcCC-CCcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHhcC
Q 018820 184 VFTLAGLSVKSYRYYD---P-----ATRGLNFQGLLEDLGSAP-AGAIVLLHACAHNPT-GVDPTLQQWERIRQLMRSKG 253 (350)
Q Consensus 184 ~~~~~G~~~~~v~~~~---~-----~~~~~d~~~l~~~l~~~~-~~~~~l~~~~p~NPT-G~~~s~~~~~~i~~~~~~~~ 253 (350)
.+...|.+++.++... . .++.+|++.+++.++... .+..++++++||||| |.+++.+++++|+++|++||
T Consensus 138 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~g 217 (467)
T 1ax4_A 138 HVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHG 217 (467)
T ss_dssp HHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHT
T ss_pred HHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcC
Confidence 8899999988776521 1 134689999999987532 234588889999999 89999999999999999999
Q ss_pred cEEEEccCCCC---C-------CCCCCCCchHHHH-HHhhcCCcEEEEeccccccCccCcce-eEEEEeeCCh-hHHHHH
Q 018820 254 LLPFFDSAYQG---F-------ASGSLDSDAQSVR-MFVADGGECFIAQSYAKNLGLYGERV-GALSIVCKTA-DVAGRV 320 (350)
Q Consensus 254 ~~ii~DeaY~~---~-------~~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~~~-~~~~~~ 320 (350)
+++|+|+++.. + .+.+ .+...+. ...... . +++.|+||.+|++ + ||++ ++|+ +..+.+
T Consensus 218 i~li~De~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-d-~~~~s~sK~~g~~---~Gg~~~--~~d~~~l~~~~ 288 (467)
T 1ax4_A 218 IFVVMDSARFCENAYFIKARDPKYKN--ATIKEVIFDMYKYA-D-ALTMSAKKDPLLN---IGGLVA--IRDNEEIFTLA 288 (467)
T ss_dssp CCEEEECTTHHHHHHHHHHHCGGGTT--CCHHHHHHHHGGGC-S-EEEEETTSTTCCS---SCEEEE--ESSCHHHHHHH
T ss_pred CEEEEEchhhhhcchhccccccccCC--Cchhhhhhhhcccc-c-eEEEeccccCCCC---cceEEE--eCCHHHHHHHH
Confidence 99999997432 0 2221 1111110 000112 2 4568999998765 4 4544 5655 555544
Q ss_pred H
Q 018820 321 E 321 (350)
Q Consensus 321 ~ 321 (350)
.
T Consensus 289 ~ 289 (467)
T 1ax4_A 289 R 289 (467)
T ss_dssp H
T ss_pred H
Confidence 3
No 139
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.82 E-value=1e-19 Score=175.85 Aligned_cols=186 Identities=12% Similarity=0.099 Sum_probs=133.6
Q ss_pred CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCCe
Q 018820 116 IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGLS 191 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~~ 191 (350)
..+..+||+++|+++ |. + ++++ +.+|++|+.++. . .+.+||.|+++.|+|..... .++..|++
T Consensus 54 ~~~~~~lr~~la~~~-g~------~-~~i~--~~sGt~a~~~al--~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~ 120 (393)
T 1n8p_A 54 NPNRENLERAVAALE-NA------Q-YGLA--FSSGSATTATIL--Q-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVE 120 (393)
T ss_dssp CHHHHHHHHHHHHHT-TC------S-EEEE--ESCHHHHHHHHH--H-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSC
T ss_pred ChhHHHHHHHHHHHh-CC------C-cEEE--ECChHHHHHHHH--H-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcE
Confidence 446789999999984 43 2 3444 566699998843 4 57899999999999985444 34667999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc----CcEEEEccCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK----GLLPFFDSAYQGFAS 267 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~----~~~ii~DeaY~~~~~ 267 (350)
++.++. + | +.+++.++++ ..++++++|+||||.+++ +++|+++|+++ |+++|+|++|..+..
T Consensus 121 v~~v~~-~------d-~~l~~~i~~~---t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~ 186 (393)
T 1n8p_A 121 TSFTND-L------L-NDLPQLIKEN---TKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYI 186 (393)
T ss_dssp CEEESS-H------H-HHHHHHSCSS---EEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHH
T ss_pred EEEeCC-C------h-HHHHHhcccC---ceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCcccccc
Confidence 999887 2 6 7888887643 448888999999999997 67889999999 999999999987764
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHH
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~ 345 (350)
.+ .. .. ...+++.|+||.+|.+|+|+ ||++ +.+++..+.+ ...........+...+.++..
T Consensus 187 ~~------~~----~~-~~di~~~S~sK~~g~~G~rigG~~~--~~~~~~~~~l----~~~~~~~g~~~~~~~~~~~~~ 248 (393)
T 1n8p_A 187 SN------PL----NF-GADIVVHSATKYINGHSDVVLGVLA--TNNKPLYERL----QFLQNAIGAIPSPFDAWLTHR 248 (393)
T ss_dssp CC------GG----GG-TCSEEEEETTTTTTCSSCCCCEEEE--ESCHHHHHHH----HHHHHHHCCCCCHHHHHHHHH
T ss_pred CC------HH----Hc-CCeEEEEECcccccCCCCceeEEEE--eCCHHHHHHH----HHHHHhcCCCCCHHHHHHHHh
Confidence 31 11 11 35688999999999999999 8877 7555444333 333322223344555554433
No 140
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.82 E-value=1.2e-19 Score=174.41 Aligned_cols=204 Identities=18% Similarity=0.109 Sum_probs=139.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYL-PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~-p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
+.+++++++.|.| +. +. .+.++....... ..|. +..+..+||+++++++ +. +++++ +.
T Consensus 20 ~~~~~~~l~~~~p-~~-----~~-~~~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~-~~-------~~~i~--~~ 78 (391)
T 3dr4_A 20 HMSDLPRISVAAP-RL-----DG-NERDYVLECMDT----TWISSVGRFIVEFEKAFADYC-GV-------KHAIA--CN 78 (391)
T ss_dssp --------CCCCC-CC-----CS-SHHHHHHHHHHH----TCCSSCSHHHHHHHHHHHHHH-TC-------SEEEE--ES
T ss_pred hcCCCceeccCCC-CC-----CH-HHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHh-CC-------CcEEE--eC
Confidence 3457889999987 22 12 333333333311 2355 6788999999999996 33 25666 88
Q ss_pred CchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecC
Q 018820 150 SGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC 228 (350)
Q Consensus 150 G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~ 228 (350)
||++|+.++ +.+. +.+||+|++++|+|..+...++..|++++.++. +++++.+|++.+++.++++ ..+++
T Consensus 79 ~gt~al~~~--l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~---~~~v~--- 149 (391)
T 3dr4_A 79 NGTTALHLA--LVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDN-DPRTFNLDAAKLEALITPR---TKAIM--- 149 (391)
T ss_dssp SHHHHHHHH--HHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCGGGSGGGCCTT---EEEEC---
T ss_pred CHHHHHHHH--HHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEec-CccccCcCHHHHHHhcCCC---ceEEE---
Confidence 999999884 4445 679999999999999999999999999999998 6667889999999888643 33444
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEE
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l 307 (350)
++||||...+ +++|+++|+++|+++|+|++|.... +.+ . ... ..++ +.+.||||.-+++|.|.||+
T Consensus 150 ~~n~tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~--~---~~~---~~~d--i~~~S~s~~K~l~~g~gg~~ 216 (391)
T 3dr4_A 150 PVHLYGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRG--K---KSG---SLGD--CATFSFFGNAIITTGEGGMI 216 (391)
T ss_dssp CBCGGGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETT--E---ETT---SSSS--EEEEECBTTSSSCCBSCEEE
T ss_pred EECCCCChhh---HHHHHHHHHHcCCEEEEECcccccceECC--e---eec---ccCC--EEEEECCCCCcCCcCCeEEE
Confidence 5789999765 6678999999999999999998533 221 1 110 1112 77888884444456788987
Q ss_pred EEeeCChhHHHH
Q 018820 308 SIVCKTADVAGR 319 (350)
Q Consensus 308 ~~v~~~~~~~~~ 319 (350)
+ +++++..+.
T Consensus 217 ~--~~~~~~~~~ 226 (391)
T 3dr4_A 217 T--TNDDDLAAK 226 (391)
T ss_dssp E--ESCHHHHHH
T ss_pred E--ECCHHHHHH
Confidence 7 776544333
No 141
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.81 E-value=1.5e-19 Score=172.63 Aligned_cols=174 Identities=14% Similarity=0.088 Sum_probs=129.0
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC--hHHHHHHcCCeEEEE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN--HPKVFTLAGLSVKSY 195 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v 195 (350)
...++++.+++++ +.+ . +++|++ |+|+++++.++ +.+.+.+||+|+++.++|.. +...++..|++++.+
T Consensus 57 ~~~~l~~~la~~~-~~~-~---~~~v~~--~~gg~~al~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~ 127 (393)
T 3kgw_A 57 IMEEIKQGIQYVF-QTR-N---PLTLVV--SGSGHCAMETA--LFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQM 127 (393)
T ss_dssp HHHHHHHHHHHHH-TCC-C---SEEEEE--SCCTTTHHHHH--HHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHh-CCC-C---CcEEEE--eCCcHHHHHHH--HHhcCCCCCEEEEEeCCchhHHHHHHHHHcCCceEEE
Confidence 4567888888874 442 1 345888 99999999884 44557899999999888742 266778899999999
Q ss_pred EeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCch
Q 018820 196 RYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDA 274 (350)
Q Consensus 196 ~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~ 274 (350)
++ +++ +.+|++.+++.+++ +++ ++++++||||||.+++ +++|.++|++||+++|+||+|...... .+
T Consensus 128 ~~-~~~-~~~d~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~g~~~---~~- 195 (393)
T 3kgw_A 128 IK-KPG-EHYTLQEVEEGLAQHKPV---LLFLVHGESSTGVVQP---LDGFGELCHRYQCLLLVDSVASLGGVP---IY- 195 (393)
T ss_dssp EC-CTT-CCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECC---CTTHHHHHHHTTCEEEEECTTTTTTSC---CC-
T ss_pred eC-CCC-CCCCHHHHHHHHhhCCCc---EEEEeccCCcchhhcc---HHHHHHHHHHcCCEEEEECCccccCcc---cc-
Confidence 98 543 46899999999987 554 7788999999999998 678899999999999999998632111 00
Q ss_pred HHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHH
Q 018820 275 QSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 275 ~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
. ......+++.|+||.++ .+.++||++ ++ +++.+.+..
T Consensus 196 --~----~~~~~d~~~~s~sK~~~-~~~g~g~~~--~~-----~~~~~~~~~ 233 (393)
T 3kgw_A 196 --M----DQQGIDIMYSSSQKVLN-APPGISLIS--FN-----DKAKYKVYS 233 (393)
T ss_dssp --T----TTTTCCEEEEESSSTTC-CCSSCEEEE--EC-----HHHHHHHHT
T ss_pred --h----hhcCCCEEEecCccccc-CCCceeEEE--EC-----HHHHHHHhc
Confidence 0 11124577889999874 345589877 66 455555543
No 142
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.81 E-value=3e-19 Score=173.32 Aligned_cols=192 Identities=15% Similarity=0.103 Sum_probs=136.8
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCC----cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcC
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVG----LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYH 167 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G----~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~ 167 (350)
.+.+.++....... .....|++..| ..++++.+++++ |. + ++++ +.+|++++.++ +.+. +.+
T Consensus 15 ~~~~~~a~~~~~~~-~~~~~~~~~~g~~~l~~~l~~~la~~~-g~------~-~~i~--~~~gt~al~~~--~~~~~~~~ 81 (418)
T 2c81_A 15 SDRTRRKIEEVFQS-NRWAISGYWTGEESMERKFAKAFADFN-GV------P-YCVP--TTSGSTALMLA--LEALGIGE 81 (418)
T ss_dssp CHHHHHHHHHHHHH-TCCSTTSBCCSSCCHHHHHHHHHHHHH-TC------S-EEEE--ESCHHHHHHHH--HHHTTCCT
T ss_pred CHHHHHHHHHHHhc-CCccccCcccCCHHHHHHHHHHHHHHh-CC------C-cEEE--eCCHHHHHHHH--HHHcCCCC
Confidence 45555555444322 22234877778 566666666663 43 2 3444 67778999884 4455 579
Q ss_pred CCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHH
Q 018820 168 QRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQ 247 (350)
Q Consensus 168 gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~ 247 (350)
||+|+++.|+|..+...++..|++++.++. +++++.+|++.+++.++++ ..++++ +||||... ++++|++
T Consensus 82 gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~~~---~~~v~~---~~~~G~~~---~~~~i~~ 151 (418)
T 2c81_A 82 GDEVIVPSLTWIATATAVLNVNALPVFVDV-EADTYCIDPQLIKSAITDK---TKAIIP---VHLFGSMA---NMDEINE 151 (418)
T ss_dssp TCEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHGGGCCTT---EEEECC---BCCTTCCC---CHHHHHH
T ss_pred cCEEEECCCccHhHHHHHHHcCCEEEEEec-CCCCCCcCHHHHHHhhCCC---CeEEEE---eCCcCCcc---cHHHHHH
Confidence 999999999999999999999999999998 6556889999999888643 335553 57999864 5788899
Q ss_pred HHHhcCcEEEEccCCCCCC-CCCCCCchHHHHHHhhcCCcEEEEecc--ccccCccCcceeEEEEeeCChhHHHHHH
Q 018820 248 LMRSKGLLPFFDSAYQGFA-SGSLDSDAQSVRMFVADGGECFIAQSY--AKNLGLYGERVGALSIVCKTADVAGRVE 321 (350)
Q Consensus 248 ~~~~~~~~ii~DeaY~~~~-~~~~~~~~~~~~~~~~~~~~vi~~~S~--SK~~gl~G~RvG~l~~v~~~~~~~~~~~ 321 (350)
+|+++|+++|+|++|..+. +++ .. . ...+ -+.+.|| ||.++. | |+||++ +++++..+++.
T Consensus 152 ~~~~~~~~li~D~a~~~~~~~~~--~~---~---~~~~--~~~~~s~s~~K~~~~-g-~~g~~~--~~~~~l~~~~~ 214 (418)
T 2c81_A 152 IAQEHNLFVIEDCAQSHGSVWNN--QR---A---GTIG--DIGAFSCQQGKVLTA-G-EGGIIV--TKNPRLFELIQ 214 (418)
T ss_dssp HHHHTTCEEEEECTTCTTCEETT--EE---T---TSSS--SEEEEECCTTSSSCS-S-SCEEEE--ESCHHHHHHHH
T ss_pred HHHHCCCEEEEECcccccCccCC--Ee---c---cccc--ceEEEeccCCcccCC-C-CeEEEE--ECCHHHHHHHH
Confidence 9999999999999999886 432 11 1 1111 2777888 999996 8 999988 76655444433
No 143
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.81 E-value=1.1e-19 Score=170.75 Aligned_cols=164 Identities=16% Similarity=0.129 Sum_probs=122.9
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh--HHHHHHcCCeEEE
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH--PKVFTLAGLSVKS 194 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~ 194 (350)
.+..++|+++++++ |.+.. +++|++ |+|+++++.++. .... . |+|++++|+|+.+ ...++..|++++.
T Consensus 33 ~~~~~l~~~la~~~-g~~~~---~~~v~~--t~g~t~a~~~~~--~~~~-~-d~vl~~~~~~~~~~~~~~~~~~g~~~~~ 102 (353)
T 2yrr_A 33 RVNRAIQERLAALF-DPGEG---ALVAAL--AGSGSLGMEAGL--ANLD-R-GPVLVLVNGAFSQRVAEMAALHGLDPEV 102 (353)
T ss_dssp HHHHHHHHHHHHHH-CCCTT---CEEEEE--SSCHHHHHHHHH--HTCS-C-CCEEEEECSHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHh-CCCCC---CceEEE--cCCcHHHHHHHH--HHhc-C-CcEEEEcCCCchHHHHHHHHHcCCceEE
Confidence 56789999999985 54322 578888 999999998843 3333 3 8899999988865 4556788999999
Q ss_pred EEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 195 YRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
++. ++ ++.+|++.+++.+++ +++ ++++++|+||||..++ +++|.++|+++|+++|+|++|..... . .
T Consensus 103 v~~-~~-~~~~d~~~l~~~l~~~~~~---~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~D~a~~~~~~-~--~- 170 (353)
T 2yrr_A 103 LDF-PP-GEPVDPEAVARALKRRRYR---MVALVHGETSTGVLNP---AEAIGALAKEAGALFFLDAVTTLGML-P--F- 170 (353)
T ss_dssp EEC-CT-TSCCCHHHHHHHHHHSCCS---EEEEESEETTTTEECC---HHHHHHHHHHHTCEEEEECTTTTTTS-C--C-
T ss_pred EeC-CC-CCCCCHHHHHHHHHhCCCC---EEEEEccCCCcceecC---HHHHHHHHHHcCCeEEEEcCcccccc-c--c-
Confidence 998 54 356999999999976 444 7788999999999998 56889999999999999999952211 1 1
Q ss_pred hHHHHHHhhcCCcEEEEecccccc-CccCcceeEEEEeeC
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNL-GLYGERVGALSIVCK 312 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~-gl~G~RvG~l~~v~~ 312 (350)
.+..+ + ..+++.|++|.+ +.+| +||++ ++
T Consensus 171 --~~~~~---~-~d~~~~s~~K~~~~~~g--~G~~~--~~ 200 (353)
T 2yrr_A 171 --SMRAM---G-VDYAFTGSQKCLSAPPG--LAPIA--AS 200 (353)
T ss_dssp --CHHHH---T-CSEEECCTTSTTCCCSS--CEEEE--EC
T ss_pred --ccccc---C-ceEEEecCcccccCCCc--eEEEE--EC
Confidence 12222 2 246788999965 4456 79988 76
No 144
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.81 E-value=8.6e-19 Score=168.53 Aligned_cols=238 Identities=15% Similarity=0.063 Sum_probs=148.3
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYL--PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~--p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
+...+||+.|.+...-|. ..+.+.++...... . ..+.|. +..-..+|++.++++. + .++|++ |+
T Consensus 35 g~~~lD~~~~~~~~~lG~--~~p~v~~a~~~~~~-~-~~~~~~~~~~~~~~~l~~~la~~~-~-------~~~v~~--~~ 100 (395)
T 3nx3_A 35 AKKYLDFSSGIGVCALGY--NHAKFNAKIKAQVD-K-LLHTSNLYYNENIAAAAKNLAKAS-A-------LERVFF--TN 100 (395)
T ss_dssp CCEEEESSHHHHTCTTCB--SCHHHHHHHHHHHT-T-CSCCCTTSBCHHHHHHHHHHHHHH-T-------CSEEEE--ES
T ss_pred CCEEEECCCcHHhccCCC--CCHHHHHHHHHHHH-h-ccccccccCCHHHHHHHHHHHHhc-C-------CCeEEE--eC
Confidence 556899999855333332 23444454444331 1 112121 2222344555555543 3 468888 99
Q ss_pred CchhHHHHHHHHHHHh-----cCCCEEEEcCCCCCChHHHHHHcC-------------CeEEEEEeecCCCCCCCHHHHH
Q 018820 150 SGTGSLRVGAEFLARH-----YHQRTIYIPQPTWGNHPKVFTLAG-------------LSVKSYRYYDPATRGLNFQGLL 211 (350)
Q Consensus 150 G~~~al~l~~~l~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~G-------------~~~~~v~~~~~~~~~~d~~~l~ 211 (350)
||++|+..+..++... .+++.|++.+|+|..+.......+ .++..+++ .|++.++
T Consensus 101 gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 173 (395)
T 3nx3_A 101 SGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVE 173 (395)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHH
Confidence 9999998865433222 457999999999988754433222 34444443 3788888
Q ss_pred HHhhcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEE
Q 018820 212 EDLGSAPAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIA 290 (350)
Q Consensus 212 ~~l~~~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 290 (350)
+.++. +..++++.+++|++|.. ++++++++|.++|++||+++|+||+|.+|...+ .. .....+ . ....+
T Consensus 174 ~~l~~---~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g--~~-~~~~~~-~---~~~d~ 243 (395)
T 3nx3_A 174 KLVNE---KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSG--KF-FAYEHA-Q---ILPDI 243 (395)
T ss_dssp TTCCT---TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-SGGGGG-T---CCCSE
T ss_pred HhccC---CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCC--cc-hhHHhc-C---CCCCE
Confidence 88753 23355555566777766 789999999999999999999999999885432 11 111111 1 11224
Q ss_pred eccccccCccCcceeEEEEeeCChhHHHHH-HHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 291 QSYAKNLGLYGERVGALSIVCKTADVAGRV-ESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 291 ~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.+|||.++ .|+|+||++ ++ +++ .+.+.........+.+.+++.++...|+
T Consensus 244 ~t~sK~~~-~G~~~G~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~ 294 (395)
T 3nx3_A 244 MTSAKALG-CGLSVGAFV--IN-----QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFE 294 (395)
T ss_dssp EEECGGGT-TTSCCEEEE--EC-----HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHH
T ss_pred EEeccccc-CCCceEEEE--Ec-----hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHH
Confidence 47899999 599999987 76 555 5555554333444667777777766654
No 145
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.81 E-value=2.4e-19 Score=172.86 Aligned_cols=172 Identities=10% Similarity=0.055 Sum_probs=128.6
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEE-EEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC--hHHHHHHcCCeEEE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVT-TVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN--HPKVFTLAGLSVKS 194 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~-~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~~~~G~~~~~ 194 (350)
...++++.+++++ |.+ +++++ + +.|+++++.++ +.+++.+||+|++++|+|.. +..+++..|++++.
T Consensus 45 ~~~~l~~~la~~~-g~~-----~~~~~~~--~~s~t~al~~~--~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~ 114 (416)
T 3isl_A 45 IMNETMEMLRELF-QTK-----NRWAYPI--DGTSRAGIEAV--LASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHM 114 (416)
T ss_dssp HHHHHHHHHHHHT-TCC-----CSEEEEE--ESCHHHHHHHH--HHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHh-CCC-----CCcEEEe--cCcHHHHHHHH--HHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEE
Confidence 4567888888774 432 34444 5 88999999884 44557899999999999986 66788899999999
Q ss_pred EEeecCCCCCCCHHHHHHHhh-cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 195 YRYYDPATRGLNFQGLLEDLG-SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l~-~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
++. +++ +.+|++.+++.++ .+++ ++++++||||||...+ +++|+++|+++|+++|+|++|...... .+
T Consensus 115 v~~-~~~-~~~d~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~~ 183 (416)
T 3isl_A 115 LEC-EWG-TVFDPEDIIREIKKVKPK---IVAMVHGETSTGRIHP---LKAIGEACRTEDALFIVDAVATIGGCE---VK 183 (416)
T ss_dssp EEC-CTT-CCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECC---CHHHHHHHHHTTCEEEEECTTTTTTSC---CC
T ss_pred Eec-CCC-CCCCHHHHHHHHhhCCCc---EEEEEccCCCCceecC---HHHHHHHHHHcCCEEEEECCccccCCC---cc
Confidence 998 543 5789999999997 4554 7888999999999998 677899999999999999998632211 01
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHH
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVK 325 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~ 325 (350)
. ......+++.|++|.++ .+.++||++ ++ +++.+++.
T Consensus 184 ---~----~~~~~d~~~~s~~K~l~-g~~g~g~~~--~~-----~~~~~~~~ 220 (416)
T 3isl_A 184 ---V----DEWKIDAAIGGTQKCLS-VPSGMAPIT--YN-----ERVADVIA 220 (416)
T ss_dssp ---T----TTTTCSEEECCSSSTTC-CCSSEEEEE--EC-----HHHHHHHH
T ss_pred ---h----hhcCCCEEEecCccccC-CCCCeEEEE--EC-----HHHHHHhh
Confidence 0 11124588999999854 455789877 65 44554444
No 146
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.81 E-value=5.5e-19 Score=170.06 Aligned_cols=173 Identities=10% Similarity=0.043 Sum_probs=129.4
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC--hHHHHHHcCCeEEEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN--HPKVFTLAGLSVKSYR 196 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~ 196 (350)
..++++.+++++ +.+ . ++.|++ +.|+++++.++ +.+.+.+||+|++++|+|.. +...++..|++++.+|
T Consensus 48 ~~~~~~~la~~~-~~~-~---~~~v~~--~~sgt~al~~~--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 118 (411)
T 3nnk_A 48 MNEVMALYRGVF-RTE-N---RWTMLV--DGTSRAGIEAI--LVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIE 118 (411)
T ss_dssp HHHHHHHHHHHH-TCC-C---SEEEEE--ESCHHHHHHHH--HHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHh-CCC-C---CcEEEE--CCCcHHHHHHH--HHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEe
Confidence 467788887774 442 1 233666 88999999884 44557899999999999976 8888899999999999
Q ss_pred eecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 197 YYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 197 ~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
+ +. ++.+|++.+++.+++ +++ ++++++||||||.+.+ +++|+++|++||+++|+|+++...... .+
T Consensus 119 ~-~~-~~~~d~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~---~~-- 185 (411)
T 3nnk_A 119 V-PW-GEVFTPDQVEDAVKRIRPR---LLLTVQGDTSTTMLQP---LAELGEICRRYDALFYTDATASLGGNP---LE-- 185 (411)
T ss_dssp C-CT-TCCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECC---CTTHHHHHHHHTCEEEEECTTTBTTBC---CC--
T ss_pred c-CC-CCCCCHHHHHHHHhhCCCe---EEEEeCCCCCcceecc---HHHHHHHHHHcCCEEEEECCcccCCcc---cc--
Confidence 8 43 467899999999975 444 7788899999999988 678899999999999999997532211 00
Q ss_pred HHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHH
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
+ ......+++.|++|.++ .+.++||++ ++ +++.+++..
T Consensus 186 ----~-~~~~~d~~~~s~~K~l~-~~~g~g~~~--~~-----~~~~~~~~~ 223 (411)
T 3nnk_A 186 ----T-DVWGLDAVSAGMQKCLG-GPSGTSPIT--LS-----ARMEEAIRR 223 (411)
T ss_dssp ----T-TTTTCSEEECCSTTTTC-CCSSEEEEE--EC-----HHHHHHHHT
T ss_pred ----h-hccCCcEEEecCccccC-CCCceEEEE--EC-----HHHHHHHhh
Confidence 0 11124588999999864 445789987 66 455555544
No 147
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.81 E-value=1.6e-18 Score=170.62 Aligned_cols=254 Identities=15% Similarity=0.053 Sum_probs=150.8
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...|||..|..-..-|. .+..+++++.+.+. .. ...|....+..+.++++++++...- +...++|++ |+||
T Consensus 49 g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~--~~-~~~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~--~~gg 120 (459)
T 4a6r_A 49 GNKIIDGMAGLWCVNVGY-GRKDFAEAARRQME--EL-PFYNTFFKTTHPAVVELSSLLAEVT--PAGFDRVFY--TNSG 120 (459)
T ss_dssp CCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHH--HC-SCCCTTSSSCCHHHHHHHHHHHHHS--CTTCCEEEE--ESSH
T ss_pred CCEEEECCCchhcccCCC-CCHHHHHHHHHHHH--hc-cccccccccCCHHHHHHHHHHHHhC--CCCCCEEEE--eCch
Confidence 556899998854233332 22344444444444 11 1224444455566666666632211 112678999 9999
Q ss_pred hhHHHHHHHHHHHh------cCCCEEEEcCCCCCChHHHHHHcCC-------------eEEEEEe---ecCCCCCCC---
Q 018820 152 TGSLRVGAEFLARH------YHQRTIYIPQPTWGNHPKVFTLAGL-------------SVKSYRY---YDPATRGLN--- 206 (350)
Q Consensus 152 ~~al~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~---~~~~~~~~d--- 206 (350)
++|+..+..++... .+++.|++.+|+|..+.......+. .+..++. +..+.+ .|
T Consensus 121 seA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~ 199 (459)
T 4a6r_A 121 SESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDE 199 (459)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHH
Confidence 99998865443221 2568999999999988765543322 2233332 010112 35
Q ss_pred -----HHHHHHHhhcCC-CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHH
Q 018820 207 -----FQGLLEDLGSAP-AGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRM 279 (350)
Q Consensus 207 -----~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~ 279 (350)
++.+++.+.... .+.+++++...+|++|. .++++.+++|.++|++||+++|+||+|.+|...+ + ......
T Consensus 200 ~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G--~-~~~~~~ 276 (459)
T 4a6r_A 200 FGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTG--E-WFGHQH 276 (459)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS--S-SSHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc--c-cchHhh
Confidence 778888776422 22334444434444455 5699999999999999999999999999986543 1 122222
Q ss_pred HhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHH---HhhcccccCCChhHHHHHHHHhc
Q 018820 280 FVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVK---LVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+ .....++ +|||.++..|+|+||++ ++ +++.+.+. ........+.+.+++.++...|+
T Consensus 277 ~-~~~pdi~---t~sK~l~gg~~~lg~v~--~~-----~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 337 (459)
T 4a6r_A 277 F-GFQPDLF---TAAKGLSSGYLPIGAVF--VG-----KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVA 337 (459)
T ss_dssp H-TCCCSEE---EECGGGGTTSSCCEEEE--EC-----HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHH
T ss_pred c-CCCCCee---ehhhhhcCCCCCcccee--eC-----HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHH
Confidence 2 2222333 68999985459999977 76 55666555 22222334567778877776664
No 148
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.80 E-value=3.2e-19 Score=171.01 Aligned_cols=173 Identities=13% Similarity=0.097 Sum_probs=133.5
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCe
Q 018820 113 YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLS 191 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 191 (350)
|.+..+..+||+++++++ +. +++++ ++|+++|+.++ +.+. +.+||+|++++|+|+.+...++..|++
T Consensus 35 ~~~~~~~~~l~~~la~~~-~~-------~~~~~--~~~gt~al~~~--~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~ 102 (393)
T 1mdo_A 35 ITTGPKNQELEAAFCRLT-GN-------QYAVA--VSSATAGMHIA--LMALGIGEGDEVITPSMTWVSTLNMIVLLGAN 102 (393)
T ss_dssp CSSSHHHHHHHHHHHHHH-CC-------SEEEE--ESCHHHHHHHH--HHHTTCCTTCEEEEESSSCHHHHHHHHHTTCE
T ss_pred cCCChHHHHHHHHHHHHh-CC-------CcEEE--ecChHHHHHHH--HHHcCCCCCCEEEeCCCccHhHHHHHHHCCCE
Confidence 446678999999999996 42 36777 99999999884 4455 679999999999999999999999999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC-CCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG-FASGSL 270 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~-~~~~~~ 270 (350)
++.+++ +++++.+|++.+++.++++ ..++++ .||||...+ +++|.++|+++|+++|+|++|.. +.+.+
T Consensus 103 ~~~v~~-~~~~~~~d~~~l~~~l~~~---~~~v~~---~~~~G~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~- 171 (393)
T 1mdo_A 103 PVMVDV-DRDTLMVTPEHIEAAITPQ---TKAIIP---VHYAGAPAD---LDAIYALGERYGIPVIEDAAHATGTSYKG- 171 (393)
T ss_dssp EEEECB-CTTTCCBCHHHHHHHCCTT---EEEECC---BCGGGCCCC---HHHHHHHHHHHTCCBCEECTTCTTCEETT-
T ss_pred EEEEec-cCCcCCCCHHHHHHhcCCC---ceEEEE---eCCCCCcCC---HHHHHHHHHHcCCeEEEECccccCCeECC-
Confidence 999998 6666789999999988653 335554 359999865 78889999999999999999986 33321
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHH
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~ 320 (350)
. . +. . ..+++.||||..+++|.|+||++ +++++..+++
T Consensus 172 -~---~---~~-~--~d~~~~S~~k~K~l~~~~~g~~~--~~~~~~~~~l 209 (393)
T 1mdo_A 172 -R---H---IG-A--RGTAIFSFHAIKNITCAEGGIVV--TDNPQFADKL 209 (393)
T ss_dssp -E---E---TT-S--SSEEEEECCTTSSSCSSSCEEEE--ESCHHHHHHH
T ss_pred -e---e---cC-C--CCeEEEeCCCCCccccccceEEE--eCCHHHHHHH
Confidence 1 1 11 1 56889999944445667999988 7765544444
No 149
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.80 E-value=1.2e-18 Score=169.54 Aligned_cols=241 Identities=13% Similarity=0.070 Sum_probs=147.5
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...|||+.|..-..-|. .+..+++++.+.+. ......| +.....+|.+.++++. + . .++|++ ++|
T Consensus 50 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~--~~~~~~~-~~~~~~~la~~l~~~~-~---~---~~~v~~--~~g 116 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICGH-AHPEVIEALKVAME--KGTSFGA-PCALENVLAEMVNDAV-P---S---IEMVRF--VNS 116 (427)
T ss_dssp TSCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHT--TCSCCSS-CCHHHHHHHHHHHHHS-T---T---CSEEEE--ESS
T ss_pred CCCEEEECCCchhhhccCC-CCHHHHHHHHHHHH--hCCCcCC-CCHHHHHHHHHHHHhC-C---C---CCEEEE--eCC
Confidence 3556899999865333332 22333443344443 2222223 3323344444444442 2 1 678999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHc-CC-------------------eEEEEEeecCCCCCCCHHHH
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLA-GL-------------------SVKSYRYYDPATRGLNFQGL 210 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-G~-------------------~~~~v~~~~~~~~~~d~~~l 210 (350)
|++|+..+..+......++.|++.+|+|..+....... |. .++.+|+ -|++.+
T Consensus 117 gsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l 189 (427)
T 3fq8_A 117 GTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAV 189 (427)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHH
Confidence 99999886543322345588999999997654322111 11 1333433 189999
Q ss_pred HHHhhcCCCCcEEEEecCCCCCCCCCCC-HHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 211 LEDLGSAPAGAIVLLHACAHNPTGVDPT-LQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 211 ~~~l~~~~~~~~~l~~~~p~NPTG~~~s-~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
++.+++.+.+..+++++.++|++|...+ ++.+++|.++|++||+++|+||+|.+| ..+ . ......+ .....
T Consensus 190 e~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g--~-~~~~~~~-~~~~d--- 261 (427)
T 3fq8_A 190 KALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIA--Y-GGVQEKF-GVTPD--- 261 (427)
T ss_dssp HHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTB--T-THHHHHT-TCCCS---
T ss_pred HHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC--c-chhhHhc-CCCCC---
Confidence 9999875545556776667777787665 666999999999999999999999998 432 1 1222221 11112
Q ss_pred EeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh---hcccccCCChhHHHHHHHHh
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV---IRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~i~~~~L 347 (350)
+.||||.++ +|+|+||++ ++ +++++.+... ......+.+.+++.++...|
T Consensus 262 i~t~sK~~~-~G~~~G~~~--~~-----~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal 314 (427)
T 3fq8_A 262 LTTLGKIIG-GGLPVGAYG--GK-----REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTL 314 (427)
T ss_dssp EEEECGGGG-TTSSCEEEE--EC-----HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHH
T ss_pred hhhhhhhhh-CCcceEEEE--Ec-----HHHHHhhccCCCccccCCCCcCHHHHHHHHHHH
Confidence 468999999 899999987 76 5666555432 12222345677777666555
No 150
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.80 E-value=5.8e-19 Score=173.70 Aligned_cols=251 Identities=14% Similarity=0.053 Sum_probs=151.7
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...|||..|..-..-|. .+..+++++.+.+. .. ..|....+..+.++++++++...-.. -..++|++ |+||
T Consensus 63 G~~ylD~~~~~~~~~lGh-~~p~v~~A~~~~~~--~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~--~~sG 134 (453)
T 4ffc_A 63 GNSFIDLGAGIAVTTVGA-SHPAVAAAIADQAT--HF--THTCFMVTPYEQYVQVAELLNALTPG-DHDKRTAL--FNSG 134 (453)
T ss_dssp SCEEEESSHHHHTCTTCT-TCHHHHHHHHHHHH--HC--SCCTTTTSCCHHHHHHHHHHHHHSSC-SSCEEEEE--ESSH
T ss_pred CCEEEEcCCCcccCcCCC-CCHHHHHHHHHHHH--hc--cccccCcCCCHHHHHHHHHHHHhCCC-CCCcEEEE--eCcH
Confidence 556899998854233332 22344444444444 11 12444445555555555553211100 01468998 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCC--------------eEEEEEeecC--CCCCCC--------H
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGL--------------SVKSYRYYDP--ATRGLN--------F 207 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~--------------~~~~v~~~~~--~~~~~d--------~ 207 (350)
++|+..+..+......++.|++.+|+|..+.......+. .+..+|+... +.++.+ +
T Consensus 135 seA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 214 (453)
T 4ffc_A 135 AEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAI 214 (453)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHH
Confidence 999988654332223558999999999987665543321 3455554210 112333 2
Q ss_pred HHHHHHhhcCCCCcEEEEecCCCCCCC--CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCC
Q 018820 208 QGLLEDLGSAPAGAIVLLHACAHNPTG--VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 208 ~~l~~~l~~~~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
+.+++.+. .+...+++++|.||+| ..++++.+++|.++|++||+++|+||+|.+|...+ . ......+ ..
T Consensus 215 ~~l~~~i~---~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g--~-~~a~~~~-~~-- 285 (453)
T 4ffc_A 215 SRIETQIG---AQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTG--A-WFASEHE-GI-- 285 (453)
T ss_dssp HHHHHHTC---GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS--S-SSTHHHH-TC--
T ss_pred HHHHHhcC---CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccc--c-cchhhhc-CC--
Confidence 33333332 2234566678899988 55688899999999999999999999999985432 1 1122222 11
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
...+.+|||.++. |+|+||++ ++ +++++.+.........+.+.++|.++...|+
T Consensus 286 -~pdi~t~sK~~~~-G~~~G~~~--~~-----~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~ 339 (453)
T 4ffc_A 286 -VPDIVTMAKGIAG-GMPLSAVT--GR-----AELMDAVYAGGLGGTYGGNPVTCAAAVAALG 339 (453)
T ss_dssp -CCSEEEECGGGGT-TSSCEEEE--EE-----HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred -CcchHhhhhhhcC-CcCeEEEE--EC-----HHHHhhhcccCcCCCCCcCHHHHHHHHHHHH
Confidence 1224478999985 99999987 76 5666666554444455677888877766654
No 151
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.80 E-value=3.3e-19 Score=169.19 Aligned_cols=159 Identities=18% Similarity=0.150 Sum_probs=120.5
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh----cCCCEEEEcCCCCCChHHHHHH---cCCe
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH----YHQRTIYIPQPTWGNHPKVFTL---AGLS 191 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~----~~gd~Vlv~~P~y~~~~~~~~~---~G~~ 191 (350)
..++++.+++++ |.+ +++|++ |+|+++++.++. .++. .+||.|++++|+|+.+...+.. .|++
T Consensus 45 ~~~~~~~la~~~-~~~-----~~~i~~--~~g~~~a~~~~~--~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~ 114 (382)
T 4hvk_A 45 VQEAREKVAKLV-NGG-----GGTVVF--TSGATEANNLAI--IGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFE 114 (382)
T ss_dssp HHHHHHHHHHHT-TCT-----TEEEEE--ESSHHHHHHHHH--HHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHc-CCC-----cCeEEE--ECCchHHHHHHH--HHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCE
Confidence 347778887763 432 578988 999999998854 3344 7999999999999988776554 6999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
++.++. ++ ++.+|++.+++.++++ ..++++++||||||...+ +++|+++|+++|+ +|+|++|..-...
T Consensus 115 ~~~v~~-~~-~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~~~--- 182 (382)
T 4hvk_A 115 VEYIPV-GK-YGEVDVSFIDQKLRDD---TILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHIDATASVGQIE--- 182 (382)
T ss_dssp EEEECB-CT-TSCBCHHHHHHHCCTT---EEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTBTTBC---
T ss_pred EEEecc-CC-CCCcCHHHHHHHhccC---ceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCCCC---
Confidence 999998 54 4579999999998653 348999999999999998 4578899999999 9999987632211
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
.+ .... ...+++.|+||.+|.+| +|+++
T Consensus 183 ~~---~~~~----~~d~~~~s~~K~~g~~g--~g~~~ 210 (382)
T 4hvk_A 183 VD---VEKI----GADMLTISSNDIYGPKG--VGALW 210 (382)
T ss_dssp CC---HHHH----TCSEEEEESGGGTSCTT--CEEEE
T ss_pred CC---chhc----CCCEEEEeHHHhcCCCc--eEEEE
Confidence 11 1111 24588999999887666 66655
No 152
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.80 E-value=7.2e-19 Score=172.54 Aligned_cols=241 Identities=16% Similarity=0.091 Sum_probs=139.3
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...|||+.|.....-|. ..+.|.++...... ... .| .+..++++++++++.... + ..++|++ ++|+
T Consensus 56 g~~~iD~~~~~~~~~lg~--~~~~v~~a~~~~~~-~~~--~~---~~~~~~~~~la~~l~~~~-~--~~~~v~~--~~gg 122 (453)
T 2cy8_A 56 GNVYLDFFGGHGALVLGH--GHPRVNAAIAEALS-HGV--QY---AASHPLEVRWAERIVAAF-P--SIRKLRF--TGSG 122 (453)
T ss_dssp CCEEEESCTTTTSCTTCB--TCHHHHHHHHHHHT-TTC--SS---CSSCHHHHHHHHHHHHHC-T--TCSEEEE--ESCH
T ss_pred CCEEEECcccHhhcccCC--CCHHHHHHHHHHHH-hCC--CC---CCCCHHHHHHHHHHHhhC-C--CCCEEEE--eCCH
Confidence 456789998864222232 23445555444331 221 23 245788999999853221 1 2678998 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH-----------cCCe------EEEEEeecCCCCCCCHHHHHHHh
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL-----------AGLS------VKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~-----------~G~~------~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
++|+.++......+.+++.|++.+|+|..+...... .|+. ++.+++ .|++.+++.+
T Consensus 123 ~eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l 195 (453)
T 2cy8_A 123 TETTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVF 195 (453)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHH
Confidence 999988654311133457888889999876543221 1331 222222 3899999888
Q ss_pred hcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEecc
Q 018820 215 GSAPAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSY 293 (350)
Q Consensus 215 ~~~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 293 (350)
++.+.+..+++++..+||||.. ++++++++|.++|++||+++|+||+|.+|..+ . ......+ .....+ .||
T Consensus 196 ~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g---~-~~~~~~~-~~~~di---~s~ 267 (453)
T 2cy8_A 196 ANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVG---N-HGMQALL-DVQPDL---TCL 267 (453)
T ss_dssp HHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTC---T-THHHHHH-TCCCSE---EEE
T ss_pred HhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccC---c-hhhhHHh-CCCCcE---EEE
Confidence 7432223344433334779975 57999999999999999999999999988333 1 1222222 112233 389
Q ss_pred ccccCccCcceeEEEEeeCChhHHHHHHHHHHH-----hhcccccCCChhHHHHHHHHhc
Q 018820 294 AKNLGLYGERVGALSIVCKTADVAGRVESQVKL-----VIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 294 SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
||.++ .|+|+||++ ++ +++.+.+.. .......+.+.+++.++...|+
T Consensus 268 sK~l~-~G~~~G~v~--~~-----~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~ 319 (453)
T 2cy8_A 268 AKASA-GGLPGGILG--GR-----EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAID 319 (453)
T ss_dssp EGGGG-TTSSCEEEE--EC-----HHHHTTSSSCC---------CCCCHHHHHHHHHHHH
T ss_pred Chhhh-CCcceEEEe--ch-----HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHH
Confidence 99999 599999988 77 455544433 1111223466777776665553
No 153
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.80 E-value=1.6e-19 Score=171.12 Aligned_cols=201 Identities=16% Similarity=0.111 Sum_probs=129.5
Q ss_pred ccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCC
Q 018820 90 PLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQR 169 (350)
Q Consensus 90 p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd 169 (350)
|.+.++++++.+.+. .......|++..+..+|++++++++ |. +.. ++ ++||++++.++ +.+...+||
T Consensus 21 p~~~~~~~~~~~~~~-~~~~~~~y~~~~~~~~l~~~la~~~-~~------~~~-i~--~~~G~~a~~~a--l~~~~~~gd 87 (357)
T 3lws_A 21 KRNVGVLKTAFAAVA-DEMASDQYGTGAIIEPFEQKFADVL-GM------DDA-VF--FPSGTMAQQVA--LRIWSDETD 87 (357)
T ss_dssp CCBHHHHHHHHTTSC-TTCBCEETTEETTHHHHHHHHHHHH-TC------SEE-EE--ESCHHHHHHHH--HHHHHHHHT
T ss_pred CCCHHHHHHHHHHhh-cccCcccccCChHHHHHHHHHHHHh-CC------CcE-EE--ecCcHHHHHHH--HHHHhhcCC
Confidence 444555554443321 0112245877778999999999985 43 223 34 57778888763 444566777
Q ss_pred --EEEEcCCCCCChH---HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCC-CCCCCHHHHH
Q 018820 170 --TIYIPQPTWGNHP---KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT-GVDPTLQQWE 243 (350)
Q Consensus 170 --~Vlv~~P~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPT-G~~~s~~~~~ 243 (350)
.|+++.++|..+. ......|++++.++. +++.+|++.+++.. .++ ++++++||||| |.+++.++++
T Consensus 88 ~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~~--~~~---~v~~~~p~np~~G~~~~~~~l~ 159 (357)
T 3lws_A 88 NRTVAYHPLCHLEIHEQDGLKELHPIETILVGA---ADRLMTLDEIKALP--DIA---CLLLELPQREIGGVAPAFSELE 159 (357)
T ss_dssp CCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC---TTSCCCHHHHHTCC--SCS---EEEEESSBGGGTSBCCCHHHHH
T ss_pred CcEEEecccceeeeeccchhhhccCcEEEEecC---CCCCcCHHHHhcCc--Ccc---eEEEEcccccCCceeCCHHHHH
Confidence 6777766543222 234566888888764 34579999988762 133 78889999998 9999999999
Q ss_pred HHHHHHHhcCcEEEEccCCCCC--CCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHH
Q 018820 244 RIRQLMRSKGLLPFFDSAYQGF--ASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVE 321 (350)
Q Consensus 244 ~i~~~~~~~~~~ii~DeaY~~~--~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~ 321 (350)
+|+++|++||+++|+|++|... .+.+ . ....+... ..+ ++.||||.|+.++- ||++ ++ +.++
T Consensus 160 ~i~~~~~~~~~~li~D~a~~~~~~~~~~--~---~~~~~~~~-~d~-~~~s~sK~~~~~~g--g~~~--~~-----~~~~ 223 (357)
T 3lws_A 160 TISRYCRERGIRLHLDGARLFEMLPYYE--K---TAAEIAGL-FDS-IYISFYKGLGGIAG--AILA--GP-----AAFC 223 (357)
T ss_dssp HHHHHHHHTTCEEEEEETTHHHHHHHHT--C---CHHHHHTT-SSE-EEEESSSTTCCSSC--EEEE--EC-----HHHH
T ss_pred HHHHHHHHcCCEEEEECchhhhhhhhcC--C---ChHHHHhc-CCE-EEEeccccCCCCce--EEEE--cC-----HHHH
Confidence 9999999999999999998621 1111 1 12222222 233 37899999932332 8866 65 3455
Q ss_pred HHHHHh
Q 018820 322 SQVKLV 327 (350)
Q Consensus 322 ~~l~~~ 327 (350)
+++...
T Consensus 224 ~~~~~~ 229 (357)
T 3lws_A 224 QTARIW 229 (357)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 154
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.80 E-value=4.8e-19 Score=170.74 Aligned_cols=176 Identities=14% Similarity=0.111 Sum_probs=131.5
Q ss_pred CCCCCC--cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcC
Q 018820 113 YLPIVG--LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAG 189 (350)
Q Consensus 113 Y~p~~G--~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G 189 (350)
|.+..| ..+||+++++++ +. ++|++ ++|+++|+.++ +.++ +.+||.|++++|+|..+...++..|
T Consensus 26 ~~~~~g~~~~~l~~~la~~~-~~-------~~v~~--~~ggt~al~~~--~~~l~~~~gd~Vl~~~~~~~~~~~~~~~~g 93 (394)
T 1o69_A 26 YIAPLGEFVNRFEQSVKDYS-KS-------ENALA--LNSATAALHLA--LRVAGVKQDDIVLASSFTFIASVAPICYLK 93 (394)
T ss_dssp TTSCTTHHHHHHHHHHHHHH-CC-------SEEEE--ESCHHHHHHHH--HHHTTCCTTCEEEEESSSCGGGTHHHHHTT
T ss_pred CccCCChHHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHHH--HHHcCCCCCCEEEECCCccHHHHHHHHHcC
Confidence 666678 899999999996 42 57888 99999999884 4455 6799999999999999999999999
Q ss_pred CeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCC
Q 018820 190 LSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASG 268 (350)
Q Consensus 190 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~ 268 (350)
++++.++. + +++.+|++.+++.+++.+.+..+++++ ||||.. +++++|.++|+++|+++|+|++|. ++.+.
T Consensus 94 ~~~~~v~~-~-~~~~~d~~~l~~~i~~~~~~~~~v~~~---~~~G~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~~~ 165 (394)
T 1o69_A 94 AKPVFIDC-D-ETYNIDVDLLKLAIKECEKKPKALILT---HLYGNA---AKMDEIVEICKENDIVLIEDAAEALGSFYK 165 (394)
T ss_dssp CEEEEECB-C-TTSSBCHHHHHHHHHHCSSCCCEEEEE---CGGGCC---CCHHHHHHHHHHTTCEEEEECTTCTTCEET
T ss_pred CEEEEEEe-C-CCCCcCHHHHHHHHhcccCCceEEEEE---CCCCCh---hhHHHHHHHHHHcCCEEEEECcCcccceeC
Confidence 99999998 5 457899999999987631112255554 399954 467888999999999999999998 56553
Q ss_pred CCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHH
Q 018820 269 SLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~ 320 (350)
+ .. . ...+. +.+.||||..+++|.|+||++ +++++..+.+
T Consensus 166 ~--~~---~---~~~~~--~~~~s~s~~K~l~~~~~G~~~--~~~~~l~~~l 205 (394)
T 1o69_A 166 N--KA---L---GTFGE--FGVYSYNGNKIITTSGGGMLI--GKNKEKIEKA 205 (394)
T ss_dssp T--EE---T---TSSSS--EEEEECCTTSSSCCSSCEEEE--ESCHHHHHHH
T ss_pred C--cc---c---ccccC--cEEEEEeCCccCCCCCceEEE--ECCHHHHHHH
Confidence 2 11 1 01111 556777655566788999988 7655443333
No 155
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.80 E-value=2.9e-19 Score=170.17 Aligned_cols=198 Identities=13% Similarity=0.074 Sum_probs=144.6
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchh
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTG 153 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~ 153 (350)
..+||+.|.| + . .+ ++++....... ..|.+..+..+||+++++++ +. +++++ +.||++
T Consensus 7 ~~~~l~~~~~-~-----~-~~-~~~~~~~~~~~----~~~~~~~~~~~l~~~la~~~-~~-------~~~~~--~~~gt~ 64 (374)
T 3uwc_A 7 PYSYLERQFA-D-----I-EP-YLNDLREFIKT----ADFTLGAELEKFEKRFAALH-NA-------PHAIG--VGTGTD 64 (374)
T ss_dssp CSCCHHHHTS-S-----C-HH-HHHHHHHHHHH----TCCSSCHHHHHHHHHHHHHT-TC-------SEEEE--ESCHHH
T ss_pred eeeccccCCC-C-----c-hH-HHHHHHHHHHc----CCcccChhHHHHHHHHHHHh-CC-------CcEEE--eCCHHH
Confidence 4678888877 2 1 22 55555544412 24778889999999999985 33 25666 899999
Q ss_pred HHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCC
Q 018820 154 SLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNP 232 (350)
Q Consensus 154 al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NP 232 (350)
|+.++ +.+. +.+||+|++++|+|+.+...++..|++++.++. + +++.+|++.+++.+++. ..+++ |+||
T Consensus 65 a~~~~--~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~d~~~l~~~~~~~---~~~v~---~~n~ 134 (374)
T 3uwc_A 65 ALAMS--FKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDS-E-NGYVIDPEKIEAAITDK---TKAIM---PVHY 134 (374)
T ss_dssp HHHHH--HHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECB-C-TTSSBCGGGTGGGCCTT---EEEEC---CBCG
T ss_pred HHHHH--HHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEec-C-CCCCcCHHHHHHhCCCC---ceEEE---EeCC
Confidence 99874 4455 679999999999999999999999999999998 5 56789999999888653 23444 8999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc--cccCccCcceeEEEEe
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA--KNLGLYGERVGALSIV 310 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S--K~~gl~G~RvG~l~~v 310 (350)
||...+ +++|.++|+++|+++|+|++|..+..-+ .. .. ... ..+++.||+ |.++.+|. .||++
T Consensus 135 ~G~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~~~--~~--~~---~~~--~d~~~~s~~~~K~l~~~g~-~g~~~-- 199 (374)
T 3uwc_A 135 TGNIAD---MPALAKIAKKHNLHIVEDACQTILGRIN--DK--FV---GSW--GQFACFSLHPLKNLNVWSD-AGVII-- 199 (374)
T ss_dssp GGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEET--TE--ET---TSS--SSEEEEECSSSSSSCCSSC-CEEEE--
T ss_pred cCCcCC---HHHHHHHHHHcCCEEEEeCCCccCceeC--Ce--ec---ccc--ccEEEEeCCCCCcCCccce-eEEEE--
Confidence 999875 6778999999999999999998654211 00 11 011 146677866 99985576 88877
Q ss_pred eCChhHHH
Q 018820 311 CKTADVAG 318 (350)
Q Consensus 311 ~~~~~~~~ 318 (350)
+++++..+
T Consensus 200 ~~~~~~~~ 207 (374)
T 3uwc_A 200 THSDEYAE 207 (374)
T ss_dssp ESCHHHHH
T ss_pred eCCHHHHH
Confidence 77654433
No 156
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.79 E-value=2.6e-19 Score=170.72 Aligned_cols=189 Identities=18% Similarity=0.229 Sum_probs=140.3
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEE
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTI 171 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~V 171 (350)
.+.+.++....... ..|.+..+..+||+++++++ |. +++++ ++||++|+.++ +.+. +.+||+|
T Consensus 15 ~~~v~~a~~~~~~~----~~~~~~~~~~~l~~~la~~~-~~-------~~~~~--~~sGt~al~~a--l~~~~~~~gd~V 78 (367)
T 3nyt_A 15 KDKIDAGIQRVLRH----GQYILGPEVTELEDRLADFV-GA-------KYCIS--CANGTDALQIV--QMALGVGPGDEV 78 (367)
T ss_dssp HHHHHHHHHHHHHH----CCCSSCHHHHHHHHHHHHHH-TC-------SEEEE--ESCHHHHHHHH--HHHTTCCTTCEE
T ss_pred CHHHHHHHHHHHhc----CCccCChHHHHHHHHHHHHh-CC-------CcEEE--eCCHHHHHHHH--HHHhCCCCcCEE
Confidence 44555555544411 24667778999999999986 43 36777 99999999884 4444 6799999
Q ss_pred EEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh
Q 018820 172 YIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS 251 (350)
Q Consensus 172 lv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~ 251 (350)
+++.|+|..+...++..|++++.++. +++++.+|++.+++.++.+ ..+++ |+||||...+ +++|.++|++
T Consensus 79 i~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~d~~~l~~~i~~~---~~~v~---~~~~~G~~~~---~~~i~~la~~ 148 (367)
T 3nyt_A 79 ITPGFTYVATAETVALLGAKPVYVDI-DPRTYNLDPQLLEAAITPR---TKAII---PVSLYGQCAD---FDAINAIASK 148 (367)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCGGGTGGGCCTT---EEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred EECCCccHHHHHHHHHcCCEEEEEec-CCccCCcCHHHHHHhcCcC---CcEEE---eeCCccChhh---HHHHHHHHHH
Confidence 99999999999999999999999998 7666889999999988543 33544 7899996655 6778899999
Q ss_pred cCcEEEEccCCCC-CCCCCCCCchHHHHHHhhcCCcEEEEecc--ccccCccCcceeEEEEeeCChhHHHHH
Q 018820 252 KGLLPFFDSAYQG-FASGSLDSDAQSVRMFVADGGECFIAQSY--AKNLGLYGERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 252 ~~~~ii~DeaY~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~--SK~~gl~G~RvG~l~~v~~~~~~~~~~ 320 (350)
+|+++|+|++|.. ..+++ + .. ...+ -+++.|| +|.++.+|. .||++ +++++..+++
T Consensus 149 ~~~~li~D~a~~~g~~~~~--~---~~---~~~~--di~~~Sf~~~K~l~~~g~-gg~~~--~~~~~l~~~~ 207 (367)
T 3nyt_A 149 YGIPVIEDAAQSFGASYKG--K---RS---CNLS--TVACTSFFPSAPLGCYGD-GGAIF--TNDDELATAI 207 (367)
T ss_dssp TTCCBEEECTTTTTCEETT--E---ET---TSSS--SEEEEECCTTSSSCCSSC-CEEEE--ESCHHHHHHH
T ss_pred cCCEEEEECccccCCeECC--e---ec---cCCC--CEEEEECCCCCcCCCcCc-eeEEE--eCCHHHHHHH
Confidence 9999999999974 33321 1 11 1111 4778887 899996688 88877 7765444333
No 157
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.79 E-value=1.6e-18 Score=172.96 Aligned_cols=203 Identities=15% Similarity=0.137 Sum_probs=144.8
Q ss_pred ccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcE--EEEecCCchhHHHHHHHHHHH
Q 018820 90 PLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRV--TTVQCLSGTGSLRVGAEFLAR 164 (350)
Q Consensus 90 p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v--~~~~t~G~~~al~l~~~l~~~ 164 (350)
+.+.+.+.++..... ......|....+..+++++++++ ++|.+.. ++++ ++ |+|+++++.++.. +.
T Consensus 110 ~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~---~~~v~~~~--t~ggt~a~~~al~--a~ 180 (514)
T 3mad_A 110 EHHIAFLNEVYALQS--QSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAA---GGTVCGTV--TSGGTESLLLAMK--TY 180 (514)
T ss_dssp HHHHHHHHHHHHHHT--TCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGG---TSCCEEEE--ESSHHHHHHHHHH--HH
T ss_pred CCHHHHHHHHHHHHh--hcCCcccccChHHHHHHHHHHHHHHHHcCCCCc---cCCcceEE--cCcHHHHHHHHHH--HH
Confidence 334556666665554 22223455555667777777666 3454321 3677 66 9999999988543 33
Q ss_pred hcCC--------CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCC
Q 018820 165 HYHQ--------RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD 236 (350)
Q Consensus 165 ~~~g--------d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~ 236 (350)
..+| |+|+++.|+|..+...++..|++++.+|+ ++ ++.+|++.+++.++++ ..++++++|+||||.+
T Consensus 181 ~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~-~~-~~~~d~~~Le~~i~~~---~~~v~~~~~~nptG~~ 255 (514)
T 3mad_A 181 RDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPL-DA-DYRADVAAMREAITPN---TVVVAGSAPGYPHGVV 255 (514)
T ss_dssp HHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECB-CT-TSCBCHHHHHHHCCTT---EEEEEEETTCTTTCCC
T ss_pred HHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeee-CC-CCCCCHHHHHHHhccC---CEEEEEeCCCCCCccc
Confidence 4444 89999999999999999999999999998 55 5789999999998753 4588889999999999
Q ss_pred CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCC---CCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 237 PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGS---LDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 237 ~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~---~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
.+ +++|.++|++||+++|+|++|.+|.... .......+. + ....-.+++.|++|.++ .|.++||++ +.+
T Consensus 256 ~~---l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~-~-~~~g~d~~~~s~~K~l~-~~~~~g~~~--~~~ 327 (514)
T 3mad_A 256 DP---IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFD-F-RLEGVTSVSADTHKYGY-GAKGTSVIL--YRR 327 (514)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS-T-TSTTCCEEEECTTTTTC-CCSSCEEEE--ESS
T ss_pred cC---HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCccc-c-cCCCCcEEEECchhccC-CCCCeEEEE--EeC
Confidence 87 5788999999999999999999886410 000000000 0 11123577889999864 889999987 775
Q ss_pred h
Q 018820 314 A 314 (350)
Q Consensus 314 ~ 314 (350)
+
T Consensus 328 ~ 328 (514)
T 3mad_A 328 P 328 (514)
T ss_dssp H
T ss_pred H
Confidence 4
No 158
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.79 E-value=2.5e-18 Score=167.55 Aligned_cols=249 Identities=15% Similarity=0.065 Sum_probs=151.2
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...+||..|..-..-|. .+..+++++.+.+. ..... |.|..+..+|+++++++. + + .++|++ ++|
T Consensus 51 ~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~--~~~~~-~~~~~~~~~l~~~la~~~-~-~-----~~~v~~--~~~ 117 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGH-ANDRVVEALKAVAE--RGTSF-GAPTEIENKLAKLVIERV-P-S-----IEIVRM--VNS 117 (429)
T ss_dssp TCCEEEESCGGGTTCTTCB-SCHHHHHHHHHHHH--HCSCC-SSCCHHHHHHHHHHHHHS-T-T-----CSEEEE--ESS
T ss_pred CCCEEEECCCChhhcccCC-CCHHHHHHHHHHHh--hCcCc-CCCCHHHHHHHHHHHHhC-C-C-----CCEEEE--eCC
Confidence 3567899998864233332 22333333344444 22223 346667788999998874 2 1 578999 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCCeEEEEEeecCCCCC------------CCHHHHHHHhhcC
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGLSVKSYRYYDPATRG------------LNFQGLLEDLGSA 217 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~~~~~v~~~~~~~~~------------~d~~~l~~~l~~~ 217 (350)
|++|+..+..+.....+++.|++.+|+|..+..... ..|..+..++........ -|++.+++.+++.
T Consensus 118 Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 197 (429)
T 3k28_A 118 GTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQF 197 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhC
Confidence 999998865443223466899999999976543322 223222222110000000 1789999888753
Q ss_pred CCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 218 PAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
+.+..++++...+|++|.. ++++++++|.++|++||+++|+||+|.+| ..+ . ......+ ..... +.+|||.
T Consensus 198 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g--~-~~~~~~~-~~~~d---i~t~sK~ 269 (429)
T 3k28_A 198 GDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVA--Y-NCGQGYY-GVTPD---LTCLGKV 269 (429)
T ss_dssp GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSS--T-THHHHHH-TCCCS---EEEECGG
T ss_pred CCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccC--c-chHHHHh-CCCCc---eehhhhh
Confidence 3333455544444455544 46888999999999999999999999999 432 1 1222222 11123 3479999
Q ss_pred cCccCcceeEEEEeeCChhHHHHHHHHHHHhh---cccccCCChhHHHHHHHHhc
Q 018820 297 LGLYGERVGALSIVCKTADVAGRVESQVKLVI---RPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~i~~~~L~ 348 (350)
++ .|+|+||++ ++ +++++.+.... .....+++.+++.++...|+
T Consensus 270 ~~-~G~~iG~~~--~~-----~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~ 316 (429)
T 3k28_A 270 IG-GGLPVGAYG--GK-----AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLV 316 (429)
T ss_dssp GG-TTSCCEEEE--EC-----HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHH
T ss_pred hc-CCCCeEEEE--Ec-----HHHHhhhccCCCccccCCCCCChHHHHHHHHHHH
Confidence 98 599999987 76 56665554321 22234677788887777665
No 159
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.79 E-value=2.3e-18 Score=163.88 Aligned_cols=171 Identities=15% Similarity=0.088 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH--HHHHHcCCeEEEEEe
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP--KVFTLAGLSVKSYRY 197 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~--~~~~~~G~~~~~v~~ 197 (350)
.++++.++++ +|.+.. .+.+++ |+|+++++.++ +.+.+.+||+|++++|+|..+. ..+...|++++.++.
T Consensus 55 ~~~~~~la~~-~g~~~~---~~~i~~--~~ggt~al~~~--~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (376)
T 3f0h_A 55 LENEKFMLEY-AKAPEG---SKAVFM--TCSSTGSMEAV--VMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKL 126 (376)
T ss_dssp HHHHHHHHHH-HTCCTT---CEEEEE--SSCHHHHHHHH--HHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHH-hCCCCC---ceEEEE--cCChhHHHHHH--HHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeC
Confidence 4455555555 354311 244555 88999999884 4455789999999998766554 346778999999988
Q ss_pred ecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHH
Q 018820 198 YDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSV 277 (350)
Q Consensus 198 ~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~ 277 (350)
+. ++.+|++.+++.+..+++ ++++++||||||.+++ +++|+++|+++|+++|+|++|..+... .+ .
T Consensus 127 -~~-~~~~d~~~l~~~~~~~~~---~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~---~~---~ 192 (376)
T 3f0h_A 127 -EH-GKKLTKEKLYEYDNQNFT---GLLVNVDETSTAVLYD---TMMIGEFCKKNNMFFVCDCVSAFLADP---FN---M 192 (376)
T ss_dssp -CT-TCCCCHHHHHTTTTSCCC---EEEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSC---CC---H
T ss_pred -CC-CCCCCHHHHHHhhccCce---EEEEecccCCcceecC---HHHHHHHHHHcCCEEEEEcCccccCcc---cc---c
Confidence 43 468999999987654443 7888999999999999 788899999999999999998765432 11 1
Q ss_pred HHHhhcCCcEEEEeccccccC-ccCcceeEEEEeeCChhHHHHHHHHHH
Q 018820 278 RMFVADGGECFIAQSYAKNLG-LYGERVGALSIVCKTADVAGRVESQVK 325 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~g-l~G~RvG~l~~v~~~~~~~~~~~~~l~ 325 (350)
.. . ...+++.|+||.++ .+| +|+++ ++ +++.+++.
T Consensus 193 ~~---~-~~d~~~~s~~K~l~~~~G--~g~~~--~~-----~~~~~~~~ 228 (376)
T 3f0h_A 193 NE---C-GADVMITGSQKVLACPPG--ISVIV--LA-----PRGVERVE 228 (376)
T ss_dssp HH---H-TCSEEEEETTTTTCCCSS--CEEEE--EC-----HHHHHHHH
T ss_pred cc---c-CccEEEecCcccccCCCc--eEEEE--EC-----HHHHHHhh
Confidence 11 1 13478899999998 566 56655 55 44554444
No 160
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.79 E-value=3.6e-18 Score=167.54 Aligned_cols=248 Identities=11% Similarity=0.008 Sum_probs=148.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEe
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQ 147 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~ 147 (350)
.+...|||..|..-..-|. .+..+++++.+.+. .. .+ .+..+..+.++++++++ ++.+ .+ |++
T Consensus 47 ~g~~~lD~~~~~~~~~lG~-~~p~v~~A~~~~~~--~~-~~--~~~~~~~~~~~~la~~l~~~~~~~-----~~-v~~-- 112 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSGY-GRKELAEAAYKQLQ--TL-SY--FPMSQSHEPAIKLAEKLNEWLGGE-----YV-IFF-- 112 (452)
T ss_dssp TCCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHT--TC-CC--CCTTSEEHHHHHHHHHHHHHHTSC-----EE-EEE--
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHH--hc-CC--cccccCCHHHHHHHHHHHHhCCCC-----ce-EEE--
Confidence 3556899999853233342 22333444344443 11 11 22234444455555442 2321 34 777
Q ss_pred cCCchhHHHHHHHHHHHh---c---CCCEEEEcCCCCCChHHHHHHcCCe-------------EEEEEeecCCCCCC-C-
Q 018820 148 CLSGTGSLRVGAEFLARH---Y---HQRTIYIPQPTWGNHPKVFTLAGLS-------------VKSYRYYDPATRGL-N- 206 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~---~---~gd~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~~-d- 206 (350)
|+||++|+..+..+.... . +++.|++.+|+|..+.......+.. +..++..+...... |
T Consensus 113 ~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (452)
T 3n5m_A 113 SNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIER 192 (452)
T ss_dssp ESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTT
T ss_pred eCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCc
Confidence 999999998865443211 3 6799999999999886555433321 22333200000111 1
Q ss_pred --------HHHHHHHhh-cCCCCcEEEEecCC-CCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 207 --------FQGLLEDLG-SAPAGAIVLLHACA-HNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 207 --------~~~l~~~l~-~~~~~~~~l~~~~p-~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
++.+++.++ ..+.+.++++++.+ || ||..+ +++.+++|.++|++||+++|+||+|.+|...+ .. .
T Consensus 193 ~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g--~~-~ 268 (452)
T 3n5m_A 193 ENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTG--KA-F 268 (452)
T ss_dssp SCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-S
T ss_pred hhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccc--cc-c
Confidence 788998887 22233456666666 89 99766 88889999999999999999999999986543 11 1
Q ss_pred HHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHH------hhcccccCCChhHHHHHHHHhc
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKL------VIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
....+ .....+ .+|||.++. | +|+||++ ++ +++.+.+.. +......+.+.+++.++...|+
T Consensus 269 ~~~~~-~~~~di---~t~sK~l~~-G~~~ig~~~--~~-----~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 336 (452)
T 3n5m_A 269 GFMNY-DVKPDI---ITMAKGITS-AYLPLSATA--VK-----REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLE 336 (452)
T ss_dssp GGGGT-TCCCSE---EEECGGGGT-TSSCCEEEE--EE-----HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHH
T ss_pred hhhhc-CCCCCE---EeecccccC-CCcceEEEE--EC-----HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHH
Confidence 11111 111233 368999995 9 9999987 76 566665532 1122334567777777666554
No 161
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.79 E-value=7.8e-18 Score=165.35 Aligned_cols=224 Identities=16% Similarity=0.093 Sum_probs=148.5
Q ss_pred eecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHH
Q 018820 78 LGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP--IVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSL 155 (350)
Q Consensus 78 l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p--~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al 155 (350)
.+++.| ......+..+...+....... ....+.|+. .....+|++.++++. |. ++.|+ +.+|++|+
T Consensus 75 ~~~~~P-i~~t~t~~~~~~~~~~~~~~~-~~~~~~y~r~~~~~~~~l~~~lA~l~-g~------~~~v~---~~sG~~Ai 142 (445)
T 1qgn_A 75 DAITTP-VVNTSAYFFNKTSELIDFKEK-RRASFEYGRYGNPTTVVLEEKISALE-GA------ESTLL---MASGMCAS 142 (445)
T ss_dssp SBSSCC-BCCCSBBCBSSHHHHHHHHTT-SSCCCCBGGGCCHHHHHHHHHHHHHH-TC------SEEEE---ESCHHHHH
T ss_pred CCcCCC-cccCCceecCCHHHHHhhhcc-ccCCccccCCCChHHHHHHHHHHHHh-CC------CcEEE---eCCHHHHH
Confidence 455555 334445555555555444331 222344543 223458999999985 43 33454 44555999
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCCCChHHH----HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCC
Q 018820 156 RVGAEFLARHYHQRTIYIPQPTWGNHPKV----FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHN 231 (350)
Q Consensus 156 ~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~N 231 (350)
.++ +.+++.+||.|++++|+|..+... ++..|++++.++. .|++.+++.+++++ ..++++++|+|
T Consensus 143 ~~a--l~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~-------~d~~~l~~ai~~~t--v~lV~le~p~N 211 (445)
T 1qgn_A 143 TVM--LLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP-------ADVGALELALNQKK--VNLFFTESPTN 211 (445)
T ss_dssp HHH--HHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS-------SCHHHHHHHHHHSC--EEEEEEESSCT
T ss_pred HHH--HHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC-------CCHHHHHHHhccCC--CCEEEEeCCCC
Confidence 884 455578999999999999987664 4568999988876 28999999998654 13788899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEe
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIV 310 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v 310 (350)
|||.+.+ +++|+++|+++|+++|+|++|....... +. .. ..-+++.|+||.+|..| .|+||++
T Consensus 212 ptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~------~~----~~-g~Div~~S~sK~~gg~gd~~~G~l~-- 275 (445)
T 1qgn_A 212 PFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQK------AL----AL-GADLVLHSATKFLGGHNDVLAGCIS-- 275 (445)
T ss_dssp TTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC------TT----TT-TCSEEEECTTTTTTCSSSCCCEEEE--
T ss_pred CCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC------cc----cc-CCEEEEECCcccccccccceEEEEE--
Confidence 9999987 5688999999999999999998654321 11 11 23478999999998555 4799877
Q ss_pred eCChhHHHHHHHHHHHhhcccccCCChhHHHHHHH
Q 018820 311 CKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAA 345 (350)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~ 345 (350)
++ +++++++.........+++.+.+.++..
T Consensus 276 ~~-----~~l~~~l~~~~~~~g~~~~~~~a~~~~~ 305 (445)
T 1qgn_A 276 GP-----LKLVSEIRNLHHILGGALNPNAAYLIIR 305 (445)
T ss_dssp EC-----HHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_pred EC-----HHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 65 3444555444433333345555444433
No 162
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.79 E-value=5.6e-18 Score=165.17 Aligned_cols=240 Identities=16% Similarity=0.070 Sum_probs=145.9
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...|||+.|.....-|. ..+.+.++...... ......| +..-..+|++.++++. + . .++|++ ++||
T Consensus 55 g~~~lD~~~~~~~~~lG~--~~~~v~~a~~~~~~-~~~~~~~-~~~~~~~l~~~la~~~-~---~---~~~v~~--~~sg 121 (434)
T 2epj_A 55 GARIVDLVLAYGPLILGH--KHPRVLEAVEEALA-RGWLYGA-PGEAEVLLAEKILGYV-K---R---GGMIRF--VNSG 121 (434)
T ss_dssp CCEEEESSGGGTTCTTCB--TCHHHHHHHHHHHH-TCSCCSS-CCHHHHHHHHHHHHHH-C---T---TCEEEE--ESSH
T ss_pred CCEEEEcccchhcccCCC--CCHHHHHHHHHHHH-hCCCCCC-CCHHHHHHHHHHHHhC-C---C---CCEEEE--eCCH
Confidence 456799998864222222 23444444444331 2222234 2223456666666664 2 1 578998 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH--------------HcCC------eEEEEEeecCCCCCCCHHHHH
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT--------------LAGL------SVKSYRYYDPATRGLNFQGLL 211 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~--------------~~G~------~~~~v~~~~~~~~~~d~~~l~ 211 (350)
++|+.++..+...+.+++.|++.+|+|..+..... ..|+ +++.+++ .|++.++
T Consensus 122 seA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le 194 (434)
T 2epj_A 122 TEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALE 194 (434)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHH
Confidence 99998865432124456788888999987543211 1233 2455554 3789999
Q ss_pred HHhhcCCCCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEE
Q 018820 212 EDLGSAPAGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIA 290 (350)
Q Consensus 212 ~~l~~~~~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 290 (350)
+.+++.+.+.+++++...+||||.++ +++.+++|.++|++||+++|+||+|.+|..+. ......+ .....+
T Consensus 195 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~----~~~~~~~-~~~~di--- 266 (434)
T 2epj_A 195 RVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGL----EGAQGYF-NIEGDI--- 266 (434)
T ss_dssp HHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSST----THHHHHH-TCCCSE---
T ss_pred HHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCc----chhhHHh-CCCCCe---
Confidence 88874322233444443456799865 79999999999999999999999999884431 1222222 112233
Q ss_pred eccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhh---cccccCCChhHHHHHHHHh
Q 018820 291 QSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVI---RPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 291 ~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~i~~~~L 347 (350)
.||||.++. |+|+||++ ++ +++.+.+.... .....+.+.+++.++...|
T Consensus 267 ~s~sK~l~~-G~~~G~v~--~~-----~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l 318 (434)
T 2epj_A 267 IVLGKIIGG-GFPVGAVA--GS-----REVMSLLTPQGKVFNAGTFNAHPITMAAGLATL 318 (434)
T ss_dssp EEEEGGGGT-TSSCEEEE--EC-----HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHH
T ss_pred eeecchhcC-Ccceeeee--ec-----HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHH
Confidence 489999995 99999988 76 45555444311 1122245666776665554
No 163
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.79 E-value=7.3e-18 Score=165.95 Aligned_cols=255 Identities=14% Similarity=0.066 Sum_probs=153.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...|||+.|..-..-|. .+..+++++.+++... .+.|....+..++++++++++...- +...++|++ |+|
T Consensus 49 ~G~~~lD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~---~~~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~--~~g 120 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGY-GRQKIADAIATQAKNL---AYYHAYVGHGTEASITLAKMIIDRA--PKGMSRVYF--GLS 120 (460)
T ss_dssp TCCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHHHH---SCCCCCTTCCCHHHHHHHHHHHHHS--CTTEEEEEE--ESS
T ss_pred CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhc---cccccccccCCHHHHHHHHHHHhhC--CCCcCEEEE--eCc
Confidence 3556899998843223332 2233444444444311 1224444455566666666643211 012578998 999
Q ss_pred chhHHHHHHHHHHHh------cCCCEEEEcCCCCCChHHHHHHcCC-------------eEEEEEee---cCCCCCCC--
Q 018820 151 GTGSLRVGAEFLARH------YHQRTIYIPQPTWGNHPKVFTLAGL-------------SVKSYRYY---DPATRGLN-- 206 (350)
Q Consensus 151 ~~~al~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~---~~~~~~~d-- 206 (350)
|++|+..+..+.... .+++.|++.+|+|..+.......+. .+..++.. ..++.+.+
T Consensus 121 GseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 200 (460)
T 3gju_A 121 GSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEE 200 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHH
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChh
Confidence 999998865443221 2468999999999888655443221 23444420 11222344
Q ss_pred ------HHHHHHHhhcC-CCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH
Q 018820 207 ------FQGLLEDLGSA-PAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR 278 (350)
Q Consensus 207 ------~~~l~~~l~~~-~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~ 278 (350)
++.+++.+++. +.+.+++++..++|++|. +++++.+++|.++|++||+++|+||+|.+|...+ + .....
T Consensus 201 ~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g--~-~~~~~ 277 (460)
T 3gju_A 201 QFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLG--T-MFGSD 277 (460)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS--S-SCHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc--c-cchHh
Confidence 57888877642 223446666656677776 7789999999999999999999999999985432 1 11222
Q ss_pred HHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHH-------hhcccccCCChhHHHHHHHHhc
Q 018820 279 MFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKL-------VIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 279 ~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.+ .....+ .+|||.++ .| +|+||++ ++ +++.+.+.. .......+.+.+++.++...|+
T Consensus 278 ~~-~~~pdi---~t~sK~l~-gG~~~lg~v~--~~-----~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 343 (460)
T 3gju_A 278 HY-GIKPDL---ITIAKGLT-SAYAPLSGVI--VA-----DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLE 343 (460)
T ss_dssp HH-TCCCSE---EEECGGGT-TTSSCCEEEE--EE-----HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHH
T ss_pred hc-CCCCCe---eeeehhhc-CCCCCeEEEE--EC-----HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 22 212233 36899997 56 8999977 76 566666542 1323344567777777766664
No 164
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.79 E-value=4e-18 Score=165.49 Aligned_cols=163 Identities=17% Similarity=0.174 Sum_probs=127.5
Q ss_pred CCCCCCC--CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---
Q 018820 110 VKEYLPI--VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV--- 184 (350)
Q Consensus 110 ~~~Y~p~--~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~--- 184 (350)
.+.|+.. .+..++++.+++++ |. +++++ ++|+++|+.++ +.+.+.+||.|++++|+|..+...
T Consensus 47 ~~~y~~~~~~~~~~l~~~la~~~-g~-------~~~~~--~~~gt~a~~~a--l~~l~~~gd~vi~~~~~~~~~~~~~~~ 114 (412)
T 2cb1_A 47 GYVYARQKDPTAKALEERLKALE-GA-------LEAVV--LASGQAATFAA--LLALLRPGDEVVAAKGLFGQTIGLFGQ 114 (412)
T ss_dssp SCSBTTTCCHHHHHHHHHHHHHH-TC-------SEEEE--ESSHHHHHHHH--HHTTCCTTCEEEEETTCCHHHHHHHHH
T ss_pred CcCcCCCCChHHHHHHHHHHHHh-CC-------CcEEE--ECCHHHHHHHH--HHHHhCCCCEEEEeCCCchhHHHHHHH
Confidence 3567654 56789999999985 42 36777 99999999884 444577999999999999865554
Q ss_pred -HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC
Q 018820 185 -FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263 (350)
Q Consensus 185 -~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~ 263 (350)
++..|++++.++. |++.+++.++++ ..++++++|+||||.+.+ +++|+++|+++|+++|+|++|.
T Consensus 115 ~~~~~g~~~~~~~~--------~~~~l~~~i~~~---~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~ 180 (412)
T 2cb1_A 115 VLSLMGVTVRYVDP--------EPEAVREALSAK---TRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFG 180 (412)
T ss_dssp TTTTTTCEEEEECS--------SHHHHHHHCCTT---EEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGG
T ss_pred HHHHcCCEEEEECC--------CHHHHHHHhccC---CeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCc
Confidence 3457999888865 388888888653 347888999999999996 7888999999999999999998
Q ss_pred CCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 264 GFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
.+.+.. . +. . ....+++.|+||.++.+|+|+||++
T Consensus 181 ~~~~~~---~--~~----~-~~~di~~~S~~K~~~~~~~~~G~~~ 215 (412)
T 2cb1_A 181 AAGALC---R--PL----A-WGAHVVVESLTKWASGHGSVLGGAV 215 (412)
T ss_dssp TTTTSC---C--GG----G-GTCSEEEEETTTTTTCSSCCCCEEE
T ss_pred cccccC---C--cc----c-cCCeEEEECCcccccCCCCcEEEEE
Confidence 772211 1 11 1 1357889999999998999999988
No 165
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.79 E-value=4.5e-19 Score=170.60 Aligned_cols=209 Identities=16% Similarity=0.145 Sum_probs=135.9
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCC---CcHH--HHH-----HHHHHHhCCCCCCccCCc
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIV---GLAE--FNK-----LSAKLILGADSPAIRENR 142 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~---G~~~--lr~-----aia~~~~g~~~~~~~~~~ 142 (350)
.+.|+|..|.+ +. .+.+.++...... ......|+... |.+. +++ .++++ +|.+ +++
T Consensus 23 ~~~i~~~~~~~------~~-~~~v~~a~~~~~~-~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~-~g~~-----~~~ 88 (407)
T 2dkj_A 23 REGLELIASEN------FV-SKQVREAVGSVLT-NKYAEGYPGARYYGGCEVIDRVESLAIERAKAL-FGAA-----WAN 88 (407)
T ss_dssp HTSEECCTTCC------CC-CHHHHHHHTSGGG-GCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH-HTCS-----EEE
T ss_pred hcceeeccCCC------CC-CHHHHHHHHhhhh-cCcccCCCcccccCCchHHHHHHHHHHHHHHHH-hCCC-----cce
Confidence 46899999977 22 3445555444331 11223464432 6554 444 44454 4542 344
Q ss_pred EEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh---HHHHHHcCCeEEEEEee-cCCCCCCCHHHHHHHhhc-C
Q 018820 143 VTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH---PKVFTLAGLSVKSYRYY-DPATRGLNFQGLLEDLGS-A 217 (350)
Q Consensus 143 v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~---~~~~~~~G~~~~~v~~~-~~~~~~~d~~~l~~~l~~-~ 217 (350)
|++ ++| ++++.++. .+.+.+||+|++++|+|+.+ ...++..|.+++.+++. +++++.+|++.+++.++. +
T Consensus 89 i~~--~sG-t~a~~~~~--~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 163 (407)
T 2dkj_A 89 VQP--HSG-SQANMAVY--MALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHR 163 (407)
T ss_dssp CCC--SSH-HHHHHHHH--HHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHC
T ss_pred EEe--cch-HHHHHHHH--HHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcC
Confidence 554 555 56888743 44478999999999999988 34555666644445441 334678999999999874 4
Q ss_pred CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC-CCCCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 218 PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG-FASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
++ ++++++|+|| ...+ +++|.++|+++|+++|+||+|.. +.+.+. .... + . ...+++.||||.
T Consensus 164 ~~---~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~--~~~~---~-~--~~di~~~s~sK~ 227 (407)
T 2dkj_A 164 PK---VIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGL--HPNP---L-P--YAHVVTSTTHKT 227 (407)
T ss_dssp CS---EEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTC--SCCC---T-T--TCSEEEEESSGG
T ss_pred Ce---EEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCc--cCCc---c-c--cccEEEEecccc
Confidence 43 5666899998 3444 78899999999999999999987 554321 1000 1 1 256889999994
Q ss_pred cCccCcceeEEEEeeCChhHHHHH
Q 018820 297 LGLYGERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~~~~~~~~~ 320 (350)
++|+|+||++ +++++..+.+
T Consensus 228 --l~g~~~G~~~--~~~~~~~~~l 247 (407)
T 2dkj_A 228 --LRGPRGGLIL--SNDPELGKRI 247 (407)
T ss_dssp --GCCCSCEEEE--ESCHHHHHHH
T ss_pred --CCCCCceEEE--ECCHHHHHHH
Confidence 5699999988 7755444333
No 166
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.79 E-value=1.5e-17 Score=163.01 Aligned_cols=239 Identities=14% Similarity=0.115 Sum_probs=150.9
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSR-VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~-~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+...|||..|.....-|. ..+.+.++.......... ...| +..-..+|++.++++. | .++|++ ++|
T Consensus 75 g~~ylD~~sg~~~~~lgh--~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~v~~--~~s 141 (439)
T 2oat_A 75 GRKYFDFLSSYSAVNQGH--CHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF-N-------YHKVLP--MNT 141 (439)
T ss_dssp CCEEEESSGGGGTTTTCB--TCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH-T-------CSEEEE--ESS
T ss_pred CCEEEEccCCcccccCCC--CCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc-C-------CCEEEE--eCC
Confidence 456899999865222221 234444444443311111 1123 3344678888888875 3 368888 999
Q ss_pred chhHHHHHHHHHHHh-------cCC-CEEEEcCCCCCChH-HHHHHcC------------CeEEEEEeecCCCCCCCHHH
Q 018820 151 GTGSLRVGAEFLARH-------YHQ-RTIYIPQPTWGNHP-KVFTLAG------------LSVKSYRYYDPATRGLNFQG 209 (350)
Q Consensus 151 ~~~al~l~~~l~~~~-------~~g-d~Vlv~~P~y~~~~-~~~~~~G------------~~~~~v~~~~~~~~~~d~~~ 209 (350)
|++|+..+..+.... .+| |.|++.+|+|..+. ..+...| .+++.+|+ .|++.
T Consensus 142 GseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~ 214 (439)
T 2oat_A 142 GVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPA 214 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHH
Confidence 999998865443211 356 89999999997764 4455444 35666655 38999
Q ss_pred HHHHhhcCCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 210 LLEDLGSAPAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 210 l~~~l~~~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
+++.++. .+.+++++...+|+||. .++++.+++|.++|++||+++|+||+|.+|...+ .. .....+ .....++
T Consensus 215 le~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g--~~-~~~~~~-~~~~Di~ 288 (439)
T 2oat_A 215 LERALQD--PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG--RW-LAVDYE-NVRPDIV 288 (439)
T ss_dssp HHHHTTS--TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS--SS-SGGGGG-TCCCSEE
T ss_pred HHHHhCC--CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC--cc-hhHHHh-CCCCcEE
Confidence 9998852 22345554444567896 5799999999999999999999999998876432 11 111111 1122333
Q ss_pred EEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 289 IAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 289 ~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
||||.++ .| +|+||++ ++ +++.+.+.........+.+.+++.++...|
T Consensus 289 ---t~sK~l~-~G~~~~G~v~--~~-----~~~~~~l~~~~~~~t~~~~~~~~aaa~aal 337 (439)
T 2oat_A 289 ---LLGKALS-GGLYPVSAVL--CD-----DDIMLTIKPGEHGSTYGGNPLGCRVAIAAL 337 (439)
T ss_dssp ---EECGGGG-TTSSCCEEEE--EC-----HHHHTTSCTTSSCCSSTTCHHHHHHHHHHH
T ss_pred ---Eeccccc-CCCCCeEEEE--EC-----HHHHhccCCCCcccCCCcCHHHHHHHHHHH
Confidence 9999999 69 9999988 77 455554443322333355667776665554
No 167
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.79 E-value=5.6e-18 Score=165.64 Aligned_cols=239 Identities=12% Similarity=0.111 Sum_probs=141.3
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSR-VKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~-~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+...|||..|.....-|. ..+.+.++.......... ...| +.....+|++.++++. + .++|++ ++|
T Consensus 64 G~~ylD~~~g~~~~~lgh--~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~v~~--~~s 130 (433)
T 1z7d_A 64 DKRYYDFLSAYSSVNQGH--CHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL-G-------YDKVLM--MNT 130 (433)
T ss_dssp CCEEEESSHHHHTTTTCB--TCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH-T-------CSEEEE--ESS
T ss_pred CCEEEEcccchhhcccCC--CCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc-C-------CCeEEE--eCC
Confidence 456899998864222221 234444444443311111 1123 2333567777777774 3 368888 999
Q ss_pred chhHHHHHHHHHHH-------hcCC-CEEEEcCCCCCChHH-HHHHcC------------CeEEEEEeecCCCCCCCHHH
Q 018820 151 GTGSLRVGAEFLAR-------HYHQ-RTIYIPQPTWGNHPK-VFTLAG------------LSVKSYRYYDPATRGLNFQG 209 (350)
Q Consensus 151 ~~~al~l~~~l~~~-------~~~g-d~Vlv~~P~y~~~~~-~~~~~G------------~~~~~v~~~~~~~~~~d~~~ 209 (350)
|++|+.++..+... ..+| +.|++++|+|..+.. .+...| ..++.+|+ .|++.
T Consensus 131 GseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~ 203 (433)
T 1z7d_A 131 GAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEA 203 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHH
Confidence 99999886543221 1367 999999999987643 333333 23444443 38999
Q ss_pred HHHHhhcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 210 LLEDLGSAPAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 210 l~~~l~~~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
+++.++. .+..++++...+|+||.. ++++.+++|.++|+++|+++|+||+|.+|...+ .. .....+ .....++
T Consensus 204 le~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g--~~-~~~~~~-~~~~di~ 277 (433)
T 1z7d_A 204 LEEELKD--PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTG--KL-LCVHHY-NVKPDVI 277 (433)
T ss_dssp HHHHHTS--TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS--SS-SGGGGG-TCCCSEE
T ss_pred HHHHhCC--CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCC--cc-hhhHhc-CCCCCEE
Confidence 9998852 223355544445679974 789999999999999999999999999875432 11 111111 1122333
Q ss_pred EEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 289 IAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 289 ~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
||||.++ +| +|+||++ ++ +++.+.+.........+.+.+++.++...|
T Consensus 278 ---t~sK~l~-~G~~~~G~v~--~~-----~~~~~~l~~~~~~~t~~~~~~~~aaa~aal 326 (433)
T 1z7d_A 278 ---LLGKALS-GGHYPISAVL--AN-----DDIMLVIKPGEHGSTYGGNPLAASICVEAL 326 (433)
T ss_dssp ---EECGGGG-TTSSCCEEEE--EC-----HHHHTTCCTTCCCCTTTTCHHHHHHHHHHH
T ss_pred ---EECcccc-CCCCCeEEEE--EC-----HHHHhhhccccccccCCCCHHHHHHHHHHH
Confidence 8999999 89 9999988 77 455554443322333355667776665554
No 168
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.78 E-value=1.1e-18 Score=172.61 Aligned_cols=202 Identities=16% Similarity=0.246 Sum_probs=142.2
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHH---hCCCCCCccCCcEEEEe
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP---IVGLAEFNKLSAKLI---LGADSPAIRENRVTTVQ 147 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p---~~G~~~lr~aia~~~---~g~~~~~~~~~~v~~~~ 147 (350)
..+.|+ |.+ . .....+++++.+.+. . .+.|.+ .+|..++++++++++ +|.+ ..++ .
T Consensus 67 ~~~~lg-~~~-~----~~~p~v~~~~~~~~~---~-~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~------~~~~--~ 128 (474)
T 1wyu_B 67 TFYPLG-SCT-M----KYNPKLHEEAARLFA---D-LHPYQDPRTAQGALRLMWELGEYLKALTGMD------AITL--E 128 (474)
T ss_dssp SCCCBT-TTC-C----CCCCHHHHHHHHTTS---S-CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCS------EEEC--C
T ss_pred Cccccc-ccc-c----cCCHHHHHHHHHHHH---h-cCCCCchhhChHHHHHHHHHHHHHHHHHCCC------ceee--c
Confidence 467887 654 2 223445555444321 1 233544 567778888887773 4542 1233 3
Q ss_pred cCCchhHHHHHHHHHH--HhcCCC-----EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCC
Q 018820 148 CLSGTGSLRVGAEFLA--RHYHQR-----TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220 (350)
Q Consensus 148 t~G~~~al~l~~~l~~--~~~~gd-----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 220 (350)
++||++++..+..... ...+|| +|++++|+|+.+...++..|++++.+|+ ++ ++.+|++.+++.+.+.
T Consensus 129 ~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~-~~-~~~~d~~~L~~~i~~~--- 203 (474)
T 1wyu_B 129 PAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPS-GP-EGEVDLEALKRELGPH--- 203 (474)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECB-CT-TSSBCHHHHHHHCSTT---
T ss_pred ChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecC-CC-CCCcCHHHHHHhhCCC---
Confidence 8999999976322221 134777 9999999999999999999999999998 54 4679999999998653
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc
Q 018820 221 AIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY 300 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 300 (350)
..++++++| ||||.+. +++++|+++|+++|+++|+|++|..+..+.. ....+ + ..+++.|++|.|+.+
T Consensus 204 t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~-----~~~~~---g-~di~~~s~~K~~~~p 271 (474)
T 1wyu_B 204 VAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGWA-----RPGDM---G-FDVVHLNLHKTFTVP 271 (474)
T ss_dssp EEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTTC-----CHHHH---T-CSEEECCTTTTTCCC
T ss_pred ceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccCC-----CcccC---C-CcEEEEeCccccccC
Confidence 347777887 7999873 4689999999999999999999977665421 11112 2 457788999999877
Q ss_pred -C---cceeEEEEeeC
Q 018820 301 -G---ERVGALSIVCK 312 (350)
Q Consensus 301 -G---~RvG~l~~v~~ 312 (350)
| .|+||++ ++
T Consensus 272 ~g~gG~~~G~~~--~~ 285 (474)
T 1wyu_B 272 HGGGGPGSGPVG--VK 285 (474)
T ss_dssp CTTSCCCCCCEE--EC
T ss_pred CCCCCCCeEEEE--Ec
Confidence 5 5999988 76
No 169
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.78 E-value=1.4e-17 Score=162.97 Aligned_cols=250 Identities=14% Similarity=0.087 Sum_probs=146.4
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPI-VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~-~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+...+|+..|..-..-|.. .+.|.++....... .. |... .+..++++.+++.+... . +...++|++ |+|
T Consensus 49 g~~~lD~~~~~~~~~lG~~--~~~v~~a~~~~~~~-~~---~~~~~~~~~~~~~~l~~~la~~-~-~~~~~~v~~--~~g 118 (449)
T 3a8u_X 49 GRKVYDSLSGLWTCGAGHT--RKEIQEAVAKQLST-LD---YSPGFQYGHPLSFQLAEKITDL-T-PGNLNHVFF--TDS 118 (449)
T ss_dssp CCEEEETTHHHHTCTTCBS--CHHHHHHHHHHTTT-CS---CCCSSSCCCHHHHHHHHHHHTT-S-STTEEEEEE--ESS
T ss_pred CCEEEECCccHhhccCCCC--CHHHHHHHHHHHHh-CC---CccccccCCHHHHHHHHHHHHh-C-CCCCCEEEE--cCc
Confidence 4457899877631122222 34455554443311 11 2121 23344455555543222 1 112678998 999
Q ss_pred chhHHHHHHHHHHHhc------CCCEEEEcCCCCCChH-HHHHHcCC------------eEEEEEee---cCCCCCCC--
Q 018820 151 GTGSLRVGAEFLARHY------HQRTIYIPQPTWGNHP-KVFTLAGL------------SVKSYRYY---DPATRGLN-- 206 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~------~gd~Vlv~~P~y~~~~-~~~~~~G~------------~~~~v~~~---~~~~~~~d-- 206 (350)
+++|+.++...+.... +||.|++.+|+|..+. ..+...|. .+..++.. ...-.++|
T Consensus 119 gsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~ 198 (449)
T 3a8u_X 119 GSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPK 198 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChH
Confidence 9999988654332111 6799999999998774 34554432 23334331 11001356
Q ss_pred ------HHHHHHHhhcCC-CCcEEEEecCCC-CCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHH
Q 018820 207 ------FQGLLEDLGSAP-AGAIVLLHACAH-NPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSV 277 (350)
Q Consensus 207 ------~~~l~~~l~~~~-~~~~~l~~~~p~-NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~ 277 (350)
++.+++.+++.. .+.++++ ++|+ ||||. .++++++++|.++|++||+++|+||+|.+|...+ +. ...
T Consensus 199 ~~~~~~~~~le~~l~~~~~~~~~~vi-~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g--~~-~~~ 274 (449)
T 3a8u_X 199 EGGIALADELLKLIELHDASNIAAVF-VEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTG--SM-FGA 274 (449)
T ss_dssp SSHHHHHHHHHHHHHHHCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-SHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEE-EcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccC--cc-hhh
Confidence 899998887422 2233444 4555 67996 6789999999999999999999999998885432 11 122
Q ss_pred HHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHh---------hcccccCCChhHHHHHHHHh
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLV---------IRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~q~i~~~~L 347 (350)
..+ .....++ ||||.++ .| +|+||++ ++ +++.+.+... ......+.+.+++.++...|
T Consensus 275 ~~~-~~~~di~---s~sK~l~-~G~~~~G~~~--~~-----~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal 342 (449)
T 3a8u_X 275 DSF-GVTPDLM---CIAKQVT-NGAIPMGAVI--AS-----TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAAL 342 (449)
T ss_dssp HHH-TCCCSEE---EECGGGG-TTSSCCEEEE--EE-----HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHH
T ss_pred hhc-CCCCCEE---EEccccc-CCCCceEEEE--EC-----HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHH
Confidence 222 2122433 8999998 58 9999977 66 4555655543 11222345667776666554
No 170
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.78 E-value=1.3e-18 Score=165.74 Aligned_cols=168 Identities=14% Similarity=0.095 Sum_probs=123.6
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh---cCCCEEEEc-CCCCCChH-HHHHHcCCeE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH---YHQRTIYIP-QPTWGNHP-KVFTLAGLSV 192 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~---~~gd~Vlv~-~P~y~~~~-~~~~~~G~~~ 192 (350)
...++|+++++++ +... .+.+++|++ |+|+++++.++. .+.. .+||+|+++ .|+|..+. ..++..|+++
T Consensus 39 ~~~~~~~~l~~~~-~~~~-~~~~~~v~~--~~g~t~al~~~~--~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~ 112 (385)
T 2bkw_A 39 IFQRVLKNTRAVF-KSAA-ASKSQPFVL--AGSGTLGWDIFA--SNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQV 112 (385)
T ss_dssp HHHHHHHHHHHHT-TCCG-GGTCEEEEE--ESCTTHHHHHHH--HHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHh-CCCC-CCCCceEEE--cCchHHHHHHHH--HHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCce
Confidence 4667888888885 3321 123678988 999999998843 4445 789999877 56776653 6778889999
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc--CcEEEEccCCCCCCCCC
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK--GLLPFFDSAYQGFASGS 269 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~--~~~ii~DeaY~~~~~~~ 269 (350)
+.++. +++++.+|++.+++.+++ +++ ++++++|+||||.+++ +++|+++|+++ |+++|+|++|......
T Consensus 113 ~~v~~-~~~~~~~d~~~l~~~l~~~~~~---~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~~~- 184 (385)
T 2bkw_A 113 DVVRP-LKIGESVPLELITEKLSQNSYG---AVTVTHVDTSTAVLSD---LKAISQAIKQTSPETFFVVDAVCSIGCEE- 184 (385)
T ss_dssp EEECC-SSTTSCCCHHHHHHHHHHSCCS---EEEEESEETTTTEECC---HHHHHHHHHHHCTTSEEEEECTTTTTTSC-
T ss_pred EEEec-CCCCCCCCHHHHHHHHhcCCCC---EEEEEccCCCcCeEcC---HHHHHHHHHhhCCCCEEEEECccccCCcc-
Confidence 99987 234567999999999876 443 7778999999999998 56889999999 9999999999632211
Q ss_pred CCCchHHHHHHhhcCCcEEEEeccccccC-ccCcceeEEEEeeC
Q 018820 270 LDSDAQSVRMFVADGGECFIAQSYAKNLG-LYGERVGALSIVCK 312 (350)
Q Consensus 270 ~~~~~~~~~~~~~~~~~vi~~~S~SK~~g-l~G~RvG~l~~v~~ 312 (350)
- . + ......+++.|+||.++ .+|+ ||++ ++
T Consensus 185 --~---~---~-~~~~~d~~~~s~~K~~~~~~G~--G~~~--~~ 215 (385)
T 2bkw_A 185 --F---E---F-DEWGVDFALTASQKAIGAPAGL--SISL--CS 215 (385)
T ss_dssp --C---C---T-TTTTCSEEEEESSSTTCCCSCE--EEEE--EC
T ss_pred --c---c---c-cccCceEEEecCccccccCCcc--eEEE--Ec
Confidence 0 1 1 11124578899999764 5665 9877 65
No 171
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.78 E-value=5.3e-18 Score=166.64 Aligned_cols=255 Identities=12% Similarity=0.063 Sum_probs=153.5
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...|||..|.+-..-|. .+..+++++.+.+. .. ..|....+..+.+.++++++.... +....++|++ |+|
T Consensus 59 ~g~~ylD~~~~~~~~~lGh-~~p~v~~A~~~~~~--~~--~~~~~~~~~~~~~~~la~~l~~~~-~~~~~~~v~~--~~s 130 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGN-SAPKVVEAVRSQVG--DF--THTCFMVTPYEGYVAVCEQLNRLT-PVRGDKRSAL--FNS 130 (451)
T ss_dssp TSCEEEESSHHHHTCTTCT-TCHHHHHHHHHHHT--TC--SCCTTTTSCCHHHHHHHHHHHHHS-SCCSSEEEEE--ESS
T ss_pred CCCEEEEcCCCccccccCC-CCHHHHHHHHHHHH--hc--ccccCCccCCHHHHHHHHHHHHhC-CcCCCCEEEE--eCc
Confidence 3556899998854233332 22344444444443 21 225545556666666666632211 1001468998 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCC--------------eEEEEEee----c----CCCCC---C
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGL--------------SVKSYRYY----D----PATRG---L 205 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~--------------~~~~v~~~----~----~~~~~---~ 205 (350)
|++|+..+..+......++.|++.+|+|..+.......+. .++.+|+. + .+..+ .
T Consensus 131 GseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 210 (451)
T 3oks_A 131 GSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGEL 210 (451)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHH
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHH
Confidence 9999988654432223458999999999987655443321 34555541 0 00001 1
Q ss_pred CHHHHHHHhhcC-CCCcEEEEecCCCCCCC--CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh
Q 018820 206 NFQGLLEDLGSA-PAGAIVLLHACAHNPTG--VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA 282 (350)
Q Consensus 206 d~~~l~~~l~~~-~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~ 282 (350)
+++.+++.+++. .......++.+|.|++| ..++++.+++|.++|++||+++|+||+|.+|...+ . ......+ .
T Consensus 211 ~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g--~-~~~~~~~-~ 286 (451)
T 3oks_A 211 AAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTG--A-MFACEHE-G 286 (451)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS--S-SSGGGGG-T
T ss_pred HHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccc--c-chhhhhc-C
Confidence 244454555431 12234555667888877 45577889999999999999999999999986543 1 1112111 1
Q ss_pred cCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHhc
Q 018820 283 DGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 283 ~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
....++ +|||.++ .|||+||++ ++ +++.+.+.........+.+.++|.++...|+
T Consensus 287 ~~pdi~---t~sK~l~-~G~~iG~v~--~~-----~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 341 (451)
T 3oks_A 287 IDPDLI---VTAKGIA-GGLPLSAVT--GR-----AEIMDSPHVSGLGGTYGGNPIACAAALATIE 341 (451)
T ss_dssp CCCSEE---EECGGGG-TTSSCEEEE--EE-----HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred CCCCee---eehhhhh-CCcceEEEE--EC-----HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence 112333 8999998 499999987 76 5666666554444455677888877766664
No 172
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.77 E-value=4.9e-19 Score=169.94 Aligned_cols=158 Identities=16% Similarity=0.097 Sum_probs=120.5
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh----cCCC-EEEEcCCCCCChHHHHHH---cCC
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH----YHQR-TIYIPQPTWGNHPKVFTL---AGL 190 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~----~~gd-~Vlv~~P~y~~~~~~~~~---~G~ 190 (350)
..++++.+++++ +.+ +++|++ |+|+++|+.++. .++. .+|| .|++++++|+.+...+.. .|+
T Consensus 65 ~~~l~~~la~~~-~~~-----~~~v~~--~~g~t~al~~~~--~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~ 134 (400)
T 3vax_A 65 VERAREYLASTV-SAE-----PDELIF--TSGATESNNIAL--LGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGF 134 (400)
T ss_dssp HHHHHHHHHHHT-TCC-----GGGEEE--ESCHHHHHHHHH--HTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHc-CCC-----CCcEEE--eCCHHHHHHHHH--HHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCC
Confidence 567888888763 432 578999 999999998854 3334 6899 999999999887666553 699
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.+|. ++ ++.+|++.+++.+.++ ..++++++||||||.+++ +++|+++|+++|+++|+|++|......
T Consensus 135 ~~~~v~~-~~-~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-- 204 (400)
T 3vax_A 135 EVDFLTP-GP-SGRISVEGVMERLRPD---TLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGKVP-- 204 (400)
T ss_dssp EEEEECC-CT-TCCCCHHHHHTTCCTT---EEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTTSG--
T ss_pred eEEEEcc-CC-CCCcCHHHHHHhcCCC---ceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCCCC--
Confidence 9999998 54 4678999999888653 458899999999999998 467899999999999999999743211
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCccee
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVG 305 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG 305 (350)
.. + ... ..+++.||||.+|.+|++++
T Consensus 205 ----~~---~-~~~-~d~~~~s~~K~~g~~g~g~~ 230 (400)
T 3vax_A 205 ----GD---L-TTP-IDMISISGHKIGAPKGVGAL 230 (400)
T ss_dssp ----GG---G-GSC-CSEEEEETGGGTSCSSCEEE
T ss_pred ----cC---h-hhc-CcEEEEeHHHhCCCCceEEE
Confidence 11 1 111 34789999998776665444
No 173
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.77 E-value=5e-18 Score=165.81 Aligned_cols=183 Identities=15% Similarity=0.186 Sum_probs=133.0
Q ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcC-CCCCChHHHH----
Q 018820 111 KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQ-PTWGNHPKVF---- 185 (350)
Q Consensus 111 ~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~-P~y~~~~~~~---- 185 (350)
+.|+ ..|..+|++.+|++. |. +..++..|+.||++|+.+ .+.+++.+||+|++++ |.|+.+..++
T Consensus 68 y~y~-~~~~~~Le~~lA~l~-g~------e~alv~p~~~sGt~Ai~~--al~all~pGD~Vl~~~~~~y~~~~~~~g~~~ 137 (427)
T 3i16_A 68 YGYG-DIGRDSLDAVYARVF-NT------ESALVRPHFVNGTHALGA--ALFGNLRPGNTMLSVCGEPYDTLHDVIGITE 137 (427)
T ss_dssp TCTT-CHHHHHHHHHHHHHH-TC------SEEEEETTCCSHHHHHHH--HHHHHCCTTCEEEESSSSCCGGGHHHHTCSC
T ss_pred CCCC-HHHHHHHHHHHHHHh-CC------cceEEeCCCccHHHHHHH--HHHHHhCCCCEEEEeCCCccHHHHHHHhccc
Confidence 4453 446788999999885 43 122321126888999977 4566788999999999 9999887544
Q ss_pred -------HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecC----CCCCCCCCCCHHHHHHHHHHHHh--c
Q 018820 186 -------TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC----AHNPTGVDPTLQQWERIRQLMRS--K 252 (350)
Q Consensus 186 -------~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~----p~NPTG~~~s~~~~~~i~~~~~~--~ 252 (350)
+..|++++.++. +++ +.+|++.+++.+++.+ +..++++++ |+||||. .+++++|+++|++ +
T Consensus 138 ~~~~~~l~~~G~~~~~v~~-~~~-g~~D~e~l~~~l~~~~-~tklV~i~~s~~~p~nptg~---i~dl~~i~~la~~~~~ 211 (427)
T 3i16_A 138 NSNMGSLKEFGINYKQVDL-KED-GKPNLEEIEKVLKEDE-SITLVHIQRSTGYGWRRALL---IEDIKSIVDCVKNIRK 211 (427)
T ss_dssp CCSSCCTGGGTCEEEECCC-CTT-SSCCHHHHHHHHHTCT-TEEEEEEECSCCSSSSCCCC---HHHHHHHHHHHHHHCT
T ss_pred cchHHHHHHcCCEEEEecC-ccC-CCcCHHHHHHHhhCCC-CCEEEEEEcCCCCCCCCccc---HHHHHHHHHHHHHhCC
Confidence 567999999987 543 5689999999997322 234677777 8888874 5789999999999 9
Q ss_pred CcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHH
Q 018820 253 GLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 253 ~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
|+++++|++|..+.+.. . +. .. ...|+++|+||++|.+| .+.||++ ++ +.+++++..
T Consensus 212 g~~livD~a~~~~~~~~---~--p~----~~-gaDiv~~S~sK~lgg~g~~~gG~i~--~~-----~~li~~l~~ 269 (427)
T 3i16_A 212 DIICFVDNCYGEFMDTK---E--PT----DV-GADLIAGSLIKNIGGGIAPTGGYLA--GT-----KDCIEKTSY 269 (427)
T ss_dssp TSEEEEECTTTTTSSSS---C--GG----GG-TCSEEEEETTSGGGTTTCCSCEEEE--EC-----HHHHHHHHH
T ss_pred CCEEEEECCCccccccC---C--cc----cc-CCeEEEecCcccCCCCCCceEEEEE--EC-----HHHHHHHHH
Confidence 99999999999887431 1 11 11 12488999999998666 6778876 65 455555554
No 174
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.77 E-value=3.5e-18 Score=161.32 Aligned_cols=155 Identities=13% Similarity=0.006 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC-hHHHHHHcCCeEEEEEee
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN-HPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~-~~~~~~~~G~~~~~v~~~ 198 (350)
.++++.++++ +|.. . +++|++ |+|+++++.++ +.++..+ +.+++..|.|.. +...++..|++++.++.
T Consensus 46 ~~~~~~la~~-~g~~-~---~~~v~~--~~g~t~al~~~--~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~- 114 (362)
T 3ffr_A 46 KTASDNLKTL-LELP-S---NYEVLF--LASATEIWERI--IQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEA- 114 (362)
T ss_dssp HHHHHHHHHH-TTCC-T---TEEEEE--ESCHHHHHHHH--HHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEEC-
T ss_pred HHHHHHHHHH-hCCC-C---CcEEEE--eCCchHHHHHH--HHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEec-
Confidence 4455555555 3432 1 568888 99999999884 4555666 666677777763 23466788999999988
Q ss_pred cCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc-CcEEEEccCCCCCCCCCCCCchHHH
Q 018820 199 DPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK-GLLPFFDSAYQGFASGSLDSDAQSV 277 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~-~~~ii~DeaY~~~~~~~~~~~~~~~ 277 (350)
+. ++.+|++.++ +..++ .++++++||||||.+++ +++|+++|++| |+++|+|++|..+... .+ .
T Consensus 115 ~~-~~~~d~~~l~--~~~~~---~~v~~~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~~---~~---~ 179 (362)
T 3ffr_A 115 AF-GKGFYPADIT--VPADA---EIICLTHNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYPK---FD---W 179 (362)
T ss_dssp CT-TCCCCGGGCC--CCTTC---CEEEEESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSSC---CC---T
T ss_pred CC-CCCCCHHHHh--ccCCc---cEEEEEcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCcc---cC---h
Confidence 43 4678999888 43333 37888899999999998 56678889999 9999999998765432 11 0
Q ss_pred HHHhhcCCcEEEEeccccccC-ccCcceeEEE
Q 018820 278 RMFVADGGECFIAQSYAKNLG-LYGERVGALS 308 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~g-l~G~RvG~l~ 308 (350)
. ...+++.|+||.++ .+|. |+++
T Consensus 180 ----~--~~d~~~~s~~K~~~~~~G~--g~~~ 203 (362)
T 3ffr_A 180 ----T--KIDSVFFSVQKCFGLPAGL--GVWI 203 (362)
T ss_dssp ----T--SCSEEEEETTSTTCCCSCC--EEEE
T ss_pred ----h--HCcEEEEecccccCCCCce--EEEE
Confidence 0 13478899999998 7885 5544
No 175
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.77 E-value=7.6e-18 Score=163.71 Aligned_cols=181 Identities=14% Similarity=0.141 Sum_probs=132.9
Q ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcC-CCCCChHHHH----
Q 018820 111 KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQ-PTWGNHPKVF---- 185 (350)
Q Consensus 111 ~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~-P~y~~~~~~~---- 185 (350)
+.|+ ..|..+|++.+|++. |. +..++..++.||++|+.+ .+.+++.+||+|++++ |.|..+..++
T Consensus 54 ~~y~-~~~~~~Le~~lA~l~-g~------e~alv~p~~~sGt~Ai~~--al~all~~GD~Vl~~~~~~y~~~~~~~~~~g 123 (409)
T 3jzl_A 54 YGYD-DEGRDTLERVYATVF-KT------EAALVRPQIISGTHAIST--VLFGILRPDDELLYITGQPYDTLEEIVGIRK 123 (409)
T ss_dssp TCTT-CHHHHHHHHHHHHHH-TC------SEEEEETTSCSHHHHHHH--HHHHHCCTTCEEEECSSSCCTTHHHHHTSSS
T ss_pred CCCC-hhHHHHHHHHHHHHh-CC------CcEEEECCCccHHHHHHH--HHHHhcCCCCEEEEeCCCCcHhHHHHHhccc
Confidence 4563 346788999999885 43 222222237889999987 4566788999999998 9999998544
Q ss_pred ------HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecC----CCCCCCCCCCHHHHHHHHHHHHh--cC
Q 018820 186 ------TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC----AHNPTGVDPTLQQWERIRQLMRS--KG 253 (350)
Q Consensus 186 ------~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~----p~NPTG~~~s~~~~~~i~~~~~~--~~ 253 (350)
+..|++++.++. ++ ++.+|++.+++.++++ ..++++.+ |+||||.+ .++++|+++|++ +|
T Consensus 124 ~~~~~l~~~G~~~~~v~~-~~-~g~~d~e~l~~ai~~~---tklV~i~~s~g~p~nptg~v---~~l~~I~~la~~~~~~ 195 (409)
T 3jzl_A 124 QGQGSLKDFHIGYSSVPL-LE-NGDVDFPRIAKKMTPK---TKMIGIQRSRGYADRPSFTI---EKIKEMIVFVKNINPE 195 (409)
T ss_dssp SSSSCTGGGTCEEEECCC-CT-TSCCCHHHHHHHCCTT---EEEEEEECSCTTSSSCCCCH---HHHHHHHHHHHHHCTT
T ss_pred chhhHHHHcCCEEEEeCC-CC-CCCcCHHHHHHhccCC---CeEEEEECCCCCCCCCcCcc---ccHHHHHHHHHhhCCC
Confidence 577999999987 54 4679999999998653 34777788 99999854 688999999999 99
Q ss_pred cEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCc-ceeEEEEeeCChhHHHHHHHHHHH
Q 018820 254 LLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGE-RVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 254 ~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
+++++|++|..+.++. + +. .. ...++++|+||++|.+|. +.||++ ++ + ++++++..
T Consensus 196 ~~livD~a~~~~~~~~--~---p~----~~-g~Div~~S~sK~lgg~~~~~GG~v~--~~-~----~li~~l~~ 252 (409)
T 3jzl_A 196 VIVFVDNCYGEFVEYQ--E---PP----EV-GADIIAGSLIKNPGGGLAKTGGYIA--GK-E----ALVDLCGY 252 (409)
T ss_dssp CEEEEECTTCTTTSSC--C---SG----GG-TCSEEEEETTSGGGTTTCSSCEEEE--EC-H----HHHHHHHH
T ss_pred CEEEEeCCcccccccC--C---cc----cc-CCeEEEECccccCCccCCceEEEEE--eC-H----HHHHHHHH
Confidence 9999999999887431 1 11 11 124889999999986663 457766 65 3 45555544
No 176
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.77 E-value=1.5e-18 Score=165.50 Aligned_cols=189 Identities=15% Similarity=0.108 Sum_probs=137.1
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEE
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTI 171 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~V 171 (350)
.+.+.++....... ..|.+..+..+||+++++++ |. +++++ ++||++|+.++ +.+. +.+||+|
T Consensus 16 ~~~~~~a~~~~~~~----~~~~~~~~~~~l~~~la~~~-~~-------~~~i~--~~sgt~al~~~--l~~l~~~~gd~V 79 (373)
T 3frk_A 16 EYEIKFKFEEIYKR----NWFILGDEDKKFEQEFADYC-NV-------NYCIG--CGNGLDALHLI--LKGYDIGFGDEV 79 (373)
T ss_dssp HHHHHHHHHHHHHH----TCCSSSHHHHHHHHHHHHHH-TS-------SEEEE--ESCHHHHHHHH--HHHTTCCTTCEE
T ss_pred CHHHHHHHHHHHHC----CCccCCchHHHHHHHHHHHh-CC-------CeEEE--eCCHHHHHHHH--HHHcCCCCcCEE
Confidence 44455554444312 23667788999999999995 43 36777 99999999884 4455 6799999
Q ss_pred EEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh
Q 018820 172 YIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS 251 (350)
Q Consensus 172 lv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~ 251 (350)
+++.|+|..+...++..|++++.++. +++++.+|++.+++.++++ ..+++ |+||||...+ +++|.++|++
T Consensus 80 i~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~l~~~---~~~v~---~~n~~G~~~~---l~~i~~l~~~ 149 (373)
T 3frk_A 80 IVPSNTFIATALAVSYTGAKPIFVEP-DIRTYNIDPSLIESAITEK---TKAII---AVHLYGQPAD---MDEIKRIAKK 149 (373)
T ss_dssp EEETTSCTHHHHHHHHHSCEEEEECE-ETTTTEECGGGTGGGCCTT---EEEEE---EECCTTCCCC---HHHHHHHHHH
T ss_pred EECCCCcHHHHHHHHHcCCEEEEEec-cccccCcCHHHHHHhcCCC---CeEEE---EECCCcCccc---HHHHHHHHHH
Confidence 99999999999999999999999998 6667889999999888653 33555 7899999765 5678899999
Q ss_pred cCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc--cccCccCcceeEEEEeeCChhHHHH
Q 018820 252 KGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA--KNLGLYGERVGALSIVCKTADVAGR 319 (350)
Q Consensus 252 ~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S--K~~gl~G~RvG~l~~v~~~~~~~~~ 319 (350)
+|+++|+|++|.....-+ .. . +.... -+++.||| |.++.+|. .|+++ +++++..++
T Consensus 150 ~~~~li~D~a~~~g~~~~--~~--~---~~~~~--d~~~~S~~~~K~l~~~g~-gg~~~--~~~~~~~~~ 207 (373)
T 3frk_A 150 YNLKLIEDAAQAHGSLYK--GM--K---VGSLG--DAAGFSFYPAKNLGSLGD-GGAVV--TNDKDLAEK 207 (373)
T ss_dssp HTCEEEEECTTCTTCEET--TE--E---TTSSS--SEEEEECCTTSSSCCSSS-CEEEE--ESCHHHHHH
T ss_pred cCCEEEEECCcccCCEEC--CE--e---ccccc--cEEEEeCcCCCccCccce-eEEEE--eCCHHHHHH
Confidence 999999999998543211 11 1 11111 26788887 88763354 78876 776544333
No 177
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.77 E-value=1.5e-17 Score=161.73 Aligned_cols=237 Identities=15% Similarity=0.034 Sum_probs=143.2
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHH-HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAE-QQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~-~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
+...|||..|..-..-|. ..+.|.++. +.+. ......| +..-..+|.+.++++ ++ . .++|++ ++|
T Consensus 51 g~~~iD~~~~~~~~~lG~--~~p~v~~a~~~~~~--~~~~~~~-~~~~~~~l~~~l~~~-~~---~---~~~v~~--~~~ 116 (424)
T 2e7u_A 51 GNRYLDYVMSWGPLILGH--AHPKVLARVRETLE--RGLTFGA-PSPLEVALAKKVKRA-YP---F---VDLVRF--VNS 116 (424)
T ss_dssp CCEEEESSGGGTTCTTCB--TCHHHHHHHHHHHH--TCSCCSS-CCHHHHHHHHHHHHH-CT---T---CCEEEE--ESS
T ss_pred CCEEEEccccccccccCC--CCHHHHHHHHHHHH--hCCCCCC-CCHHHHHHHHHHHHh-CC---C---CCEEEE--eCC
Confidence 445789998863222222 234444444 4443 2222223 222234555555554 22 1 678998 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-H-------------cCC------eEEEEEeecCCCCCCCHHHH
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-L-------------AGL------SVKSYRYYDPATRGLNFQGL 210 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~-------------~G~------~~~~v~~~~~~~~~~d~~~l 210 (350)
|++|+..+..+...+.+++.|++.+|+|..+..... . .|+ +++.+|+ .|++.+
T Consensus 117 g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~l 189 (424)
T 2e7u_A 117 GTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGL 189 (424)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHH
Confidence 999998854431123456889999999987654221 1 232 2444443 388999
Q ss_pred HHHhhcCCCCcEEEEecCCCCC-CCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEE
Q 018820 211 LEDLGSAPAGAIVLLHACAHNP-TGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECF 288 (350)
Q Consensus 211 ~~~l~~~~~~~~~l~~~~p~NP-TG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi 288 (350)
++.+++.+.+. .+++++|+|| ||..+ +++.+++|.++ ++||+++|+||+|.+|..+. ......+ .....+
T Consensus 190 e~~l~~~~~~~-~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~----~~~~~~~-~~~~di- 261 (424)
T 2e7u_A 190 REVLKRRGEEI-AAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAF----GGATELL-GLKPDL- 261 (424)
T ss_dssp HHHHHHHGGGE-EEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSST----THHHHHH-TCCCSE-
T ss_pred HHHHHhCCCCE-EEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccch----hHHHHHh-CCCcch-
Confidence 98886422222 3445567776 89754 79999999999 99999999999999984431 1222222 212233
Q ss_pred EEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHhh---cccccCCChhHHHHHHHHh
Q 018820 289 IAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLVI---RPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 289 ~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~i~~~~L 347 (350)
.||||.++ .|+|+||++ ++ +++++.+.... .....+.+.+++.++...|
T Consensus 262 --~s~sK~l~-~G~~~G~~~--~~-----~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal 313 (424)
T 2e7u_A 262 --VTLGKILG-GGLPAAAYA--GR-----REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATL 313 (424)
T ss_dssp --EEECGGGG-TTSSCEEEE--EC-----HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHH
T ss_pred --hhhhhhhh-CCcceEEEE--Ec-----HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHH
Confidence 39999999 699999988 77 45655554311 1122245667776665554
No 178
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.76 E-value=1.1e-17 Score=163.78 Aligned_cols=178 Identities=15% Similarity=0.182 Sum_probs=129.5
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcC-CCCCChHHHH----------H
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQ-PTWGNHPKVF----------T 186 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~-P~y~~~~~~~----------~ 186 (350)
+..+|++.++++ +|.+.. ..++.+ + ||++|+.. .+.+++.+||+|++++ |+|..+...+ +
T Consensus 66 ~~~~l~~~la~~-~g~~~~---~~~i~~--~-sGt~Ai~~--al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~ 136 (431)
T 3ht4_A 66 GRDTLEKVYADV-FGAEAG---LVRPQI--I-SGTHAIST--ALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFK 136 (431)
T ss_dssp HHHHHHHHHHHH-TTCSEE---CCBTTS--C-SHHHHHHH--HHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSG
T ss_pred hHHHHHHHHHHH-hCCCcc---ccccee--e-CHHHHHHH--HHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHH
Confidence 445677777766 454321 223333 4 77899987 4556678999999998 9999998665 4
Q ss_pred HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec-CCCCCCCCCCCHHHHHHHHHHHHh--cCcEEEEccCCC
Q 018820 187 LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA-CAHNPTGVDPTLQQWERIRQLMRS--KGLLPFFDSAYQ 263 (350)
Q Consensus 187 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~-~p~NPTG~~~s~~~~~~i~~~~~~--~~~~ii~DeaY~ 263 (350)
..|++++.++. +++ +.+|++.+++.+++++ .+|+++ +||||||.+.+.+++++|+++|++ +|+++|+|++|.
T Consensus 137 ~~G~~~~~v~~-~~~-~~~d~e~l~~~l~~~t---k~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~ 211 (431)
T 3ht4_A 137 EYNIGYNAVPL-TEG-GLVDFEAVAAAIHSNT---KMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYG 211 (431)
T ss_dssp GGTCEEEECCB-CTT-SSBCHHHHHHHCCTTE---EEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTC
T ss_pred HcCCEEEEeCC-CCC-CCcCHHHHHhhcCCCC---eEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCCh
Confidence 57999999988 543 6799999999987533 355555 799999999999999999999999 999999999999
Q ss_pred CCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCc-cCcceeEEEEeeCChhHHHHHHHHHHH
Q 018820 264 GFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGL-YGERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl-~G~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
.+.++. + +. .+ + .-+++.||||++|. .+...||++ ++ +++++++..
T Consensus 212 ~~~~~~---~--~~-~~---g-~Di~~~S~sK~lgg~~~~~GG~v~--~~-----~~li~~l~~ 258 (431)
T 3ht4_A 212 EFIEEQ---E--PC-HV---G-ADLMAGSLIKNPGGGIVKTGGYIV--GK-----EQYVEACAY 258 (431)
T ss_dssp TTSSSC---C--GG-GT---T-CSEEEEETTSGGGTTTCSSCEEEE--EC-----HHHHHHHHH
T ss_pred hhccCC---C--cc-cc---C-CeEEEcCccccCCCCCCCceEEEE--ec-----HHHHHHHHH
Confidence 998642 1 11 11 1 23889999999753 223449877 65 445555544
No 179
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.76 E-value=1e-17 Score=164.33 Aligned_cols=251 Identities=9% Similarity=-0.002 Sum_probs=143.0
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...||+..|.....-|. . .+.|.++..+... .. ..|.+..+..+.++++++++...-. ...++|++ |+||
T Consensus 43 g~~ylD~~~~~~~~~lG~-~-~p~v~~A~~~~~~-~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~sG 113 (448)
T 3dod_A 43 GKEYYDGFSSVWLNVHGH-R-KKELDDAIKKQLG-KI--AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFY--SDSG 113 (448)
T ss_dssp SCEEEETTHHHHTCSSCB-S-CHHHHHHHHHHHT-TC--SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEE--ESSH
T ss_pred CCEEEECCcchhhccCCC-C-CHHHHHHHHHHHH-hc--cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEE--eCch
Confidence 456899998854333442 2 3444444443331 21 1243445566677777776432211 11478998 9999
Q ss_pred hhHHHHHHHHHHHh--cC----CCEEEEcCCCCCChHHHHHHcCC-------------eEEEEEeecCCCCCC-------
Q 018820 152 TGSLRVGAEFLARH--YH----QRTIYIPQPTWGNHPKVFTLAGL-------------SVKSYRYYDPATRGL------- 205 (350)
Q Consensus 152 ~~al~l~~~l~~~~--~~----gd~Vlv~~P~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~~------- 205 (350)
++|+..+..+.... .+ +|.|++.+|+|..+.......+. .+..+|. ++.+..
T Consensus 114 seA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 191 (448)
T 3dod_A 114 AEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDE 191 (448)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhh
Confidence 99998865443221 04 49999999999877644332222 1223332 111222
Q ss_pred ----CHHHHHHHhhcCCCCcEEEEecCCC-CCCC-CCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHH
Q 018820 206 ----NFQGLLEDLGSAPAGAIVLLHACAH-NPTG-VDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRM 279 (350)
Q Consensus 206 ----d~~~l~~~l~~~~~~~~~l~~~~p~-NPTG-~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~ 279 (350)
|++.+++.++..+.+.+++++...+ |++| ..++++.+++|.++|++||+++|+||+|.+|...+ .. .....
T Consensus 192 ~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g--~~-~a~~~ 268 (448)
T 3dod_A 192 CRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTG--KM-FACEH 268 (448)
T ss_dssp HHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS--SS-SGGGG
T ss_pred hhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCccc--ch-hhhhh
Confidence 4788888887322333455555455 7787 55688889999999999999999999999986533 11 11111
Q ss_pred HhhcCCcEEEEeccccccCccCc-ceeEEEEeeCChhHHHHHHHHHHH-------hhcccccCCChhHHHHHHHHhc
Q 018820 280 FVADGGECFIAQSYAKNLGLYGE-RVGALSIVCKTADVAGRVESQVKL-------VIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G~-RvG~l~~v~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+ .....+ .+|||.++ .|+ |+||++ ++ +++.+.+.. .......+.+.+++.++...|+
T Consensus 269 ~-~~~~di---~t~sK~l~-~G~~~ig~v~--~~-----~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 333 (448)
T 3dod_A 269 E-NVQPDL---MAAGKGIT-GGYLPIAVTF--AT-----EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLA 333 (448)
T ss_dssp G-TCCCSE---EEECGGGG-TTSSCCEEEE--EE-----HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred c-CCCCCE---EEeccccc-CCcCceEEEE--EC-----HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHH
Confidence 1 111233 36899998 595 999987 76 667766654 3333344567777777766654
No 180
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.76 E-value=3e-18 Score=162.20 Aligned_cols=183 Identities=14% Similarity=0.109 Sum_probs=122.0
Q ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCE--EEEcCCCCCCh---HHHH
Q 018820 111 KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRT--IYIPQPTWGNH---PKVF 185 (350)
Q Consensus 111 ~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~--Vlv~~P~y~~~---~~~~ 185 (350)
..|.+..+..+|++++++++ +. + ..++ ++||++++.++ +.....+||. |+++.++|..+ ....
T Consensus 42 ~~~~~~~~~~~l~~~la~~~-~~------~-~~i~--~~~g~~a~~~a--~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~ 109 (359)
T 3pj0_A 42 DIYGNGAVIEDFETKIAKIL-GK------Q-SAVF--FPSGTMAQQIA--LRIWADRKENRRVAYHPLSHLEIHEQDGLK 109 (359)
T ss_dssp CBTTBSHHHHHHHHHHHHHH-TC------S-EEEE--ESCHHHHHHHH--HHHHHHHHTCCEEEECTTCHHHHSSTTHHH
T ss_pred CcccCCHHHHHHHHHHHHHh-CC------C-cEEE--eCCHHHHHHHH--HHHHHhcCCCcEEEEeccceeeehhcchHH
Confidence 45877888999999999985 43 1 2244 67788898774 3444566765 55555543322 1223
Q ss_pred HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 186 TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPT-GVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 186 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
...|++++.++. +++.+|++.+++. ..++ .++++++||||| |.+++.+++++|+++|++||+++|+|++|..
T Consensus 110 ~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~---~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~ 182 (359)
T 3pj0_A 110 ELQQITPLLLGT---ANQLLTIDDIKSL-REPV---SSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLW 182 (359)
T ss_dssp HHHCCEEEECSC---TTSCCCHHHHHTC-SSCC---SEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCG
T ss_pred HhcCceEEecCC---cCCCcCHHHHHhc-cCCc---eEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchh
Confidence 567999988876 3468999999887 3333 378889999998 7999999999999999999999999999865
Q ss_pred CCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHH
Q 018820 265 FASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
+.... .. .....+.. +..+ ++.||||.++.++ + ||++ ++ +++++++..
T Consensus 183 ~~~~~--~~-~~~~~~~~-~~d~-~~~s~sK~~~~~~-g-g~~~--~~-----~~l~~~~~~ 230 (359)
T 3pj0_A 183 EITPF--YQ-KSAEEICA-LFDS-VYVSFYKGIGGIA-G-AILA--GN-----DDFVQEAKI 230 (359)
T ss_dssp GGHHH--HT-CCHHHHHT-TCSE-EEEESSSTTCCSS-C-EEEE--EC-----HHHHHHHHH
T ss_pred cchhh--hC-CCHHHhhc-cCCE-EEEeccccCCCcc-e-EEEE--CC-----HHHHHHHHH
Confidence 43210 00 11222222 2233 4568999987552 2 6555 54 445555544
No 181
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.76 E-value=9e-18 Score=165.46 Aligned_cols=250 Identities=13% Similarity=0.044 Sum_probs=149.7
Q ss_pred CeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchh
Q 018820 74 VKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTG 153 (350)
Q Consensus 74 ~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~ 153 (350)
..|||..|..-..-|. .+..+++++.+.+..-......+.+.....+|++.++++. +.+ .++|++ ++||++
T Consensus 76 ~ylD~~s~~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~-~~~-----~~~v~~--~~sGse 146 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGH-GHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDIT-PAG-----LDTVFF--SDSGSV 146 (457)
T ss_dssp EEEETTHHHHTCTTCB-TCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHS-STT-----EEEEEE--ESSHHH
T ss_pred EEEECCCcHhhhccCC-CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC-CCC-----cCEEEE--eCcHHH
Confidence 6799988843223332 2233333333344311111111223334556777777663 221 568998 999999
Q ss_pred HHHHHHHHHHHh-----cCC-CEEEEcCCCCCChHHHHHHcC--------------CeEEEEEeecCCC-CCCCHHHHHH
Q 018820 154 SLRVGAEFLARH-----YHQ-RTIYIPQPTWGNHPKVFTLAG--------------LSVKSYRYYDPAT-RGLNFQGLLE 212 (350)
Q Consensus 154 al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~~~~~~G--------------~~~~~v~~~~~~~-~~~d~~~l~~ 212 (350)
|+..+..+.... .+| +.|++.+|+|..+.......+ ..+..++. ..+. ...|++.+++
T Consensus 147 A~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~d~~~le~ 225 (457)
T 3tfu_A 147 SVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQ-VPRDYDPAYSAAFEA 225 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECC-CCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecC-CCcccCHHHHHHHHH
Confidence 998865443221 044 589999999987754444331 12233333 1111 1247888998
Q ss_pred HhhcCCCCcEEEEecC-CCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEE
Q 018820 213 DLGSAPAGAIVLLHAC-AHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIA 290 (350)
Q Consensus 213 ~l~~~~~~~~~l~~~~-p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 290 (350)
.+++.+.+.+++++.. ++||+|..+ +++.+++|.++|++||+++|+||+|.+|...+ .. .....+ ....+++
T Consensus 226 ~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G--~~-~a~~~~-~~~pdii-- 299 (457)
T 3tfu_A 226 QLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTG--AL-FAADHA-GVSPDIM-- 299 (457)
T ss_dssp HHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--SS-STHHHH-TCCCSEE--
T ss_pred HHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCcccc--ch-hHhHhc-CCCceEE--
Confidence 8874333445666666 899999876 78889999999999999999999999986533 11 122222 2223444
Q ss_pred eccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHh-----hcccccCCChhHHHHHHHHhc
Q 018820 291 QSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLV-----IRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 291 ~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+|||.++ .| +|+||++ ++ +++.+.+... ......+.+.+++.++...|+
T Consensus 300 -t~sK~l~-gG~~~lG~v~--~~-----~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~ 354 (457)
T 3tfu_A 300 -CVGKALT-GGYLSLAATL--CT-----ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVE 354 (457)
T ss_dssp -EECGGGG-TTSSCCEEEE--EE-----HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHH
T ss_pred -EEChhhh-CCCcceEEEE--Ec-----HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHH
Confidence 8999887 45 7999988 76 5666666421 222233566677666655553
No 182
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.76 E-value=5.3e-18 Score=168.29 Aligned_cols=186 Identities=15% Similarity=0.139 Sum_probs=136.4
Q ss_pred CCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh---cCC---CEEEEcCCCCCCh
Q 018820 111 KEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH---YHQ---RTIYIPQPTWGNH 181 (350)
Q Consensus 111 ~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~---~~g---d~Vlv~~P~y~~~ 181 (350)
..|....|..++++.++++ ++|.+.. ++++++ ++|+++++.++...+... .+| |+|+++.|+|..+
T Consensus 97 ~~~~~~~~~~~l~~~~~~~la~~~g~~~~---~~~~~~--~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~ 171 (497)
T 3mc6_A 97 LHPDVFPAVRKMESEVVSMVLRMFNAPSD---TGCGTT--TSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGF 171 (497)
T ss_dssp TCTTTCHHHHHHHHHHHHHHHHHTTCCTT---TCCEEE--ESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHH
T ss_pred CCcccChHHHHHHHHHHHHHHHHhCCCCC---CCeEEE--cCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHH
Confidence 3465667778888888777 4555422 578888 999999998854332110 145 8999999999999
Q ss_pred HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccC
Q 018820 182 PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSA 261 (350)
Q Consensus 182 ~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~Dea 261 (350)
...++..|++++.+|+ +++++.+|++.+++.+.++ ..+|++++|+||||.+.+ +++|.++|+++|+++|+|++
T Consensus 172 ~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~~---~~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~livD~a 244 (497)
T 3mc6_A 172 DKAAYYFGMKLRHVEL-DPTTYQVDLGKVKKFINKN---TVLLVGSAPNFPHGIADD---IEGLGKIAQKYKLPLHVDSC 244 (497)
T ss_dssp HHHHHHSCCEEEEECB-CTTTCSBCTTTTGGGCCSS---EEEEEEETTCTTTCCCCS---CTTTTTHHHHTTCCEEEETT
T ss_pred HHHHHHcCCeEEEEec-CcccCcCCHHHHHHHHhhC---CEEEEEECCCCCCCcCCC---HHHHHHHHHHhCCEEEEECc
Confidence 9999999999999998 6546789999999988653 458899999999999977 56788999999999999999
Q ss_pred CCCCCCC-----CCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCCh
Q 018820 262 YQGFASG-----SLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTA 314 (350)
Q Consensus 262 Y~~~~~~-----~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~ 314 (350)
|.++... +. ...+... +... .-.+++.|++|.++ .|.++||++ +.++
T Consensus 245 ~~~~~~~f~~~~~~-~~~~~~~-~~~~-g~d~~~~s~~K~l~-~~~~~g~~~--~~~~ 296 (497)
T 3mc6_A 245 LGSFIVSFMEKAGY-KNLPLLD-FRVP-GVTSISCDTHKYGF-APKGSSVIM--YRNS 296 (497)
T ss_dssp TTHHHHGGGTTTTC-CSCCCCS-TTST-TCCEEEEETTTTTC-CCSSCEEEE--CSSH
T ss_pred chhhhhhhhhhhcc-cCCcccc-ccCC-CCcEEEECchhhcC-CCCCceeEE--ecCH
Confidence 9864311 00 0000010 1111 12467789999764 889999988 7753
No 183
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.76 E-value=1.5e-17 Score=161.27 Aligned_cols=189 Identities=15% Similarity=0.148 Sum_probs=134.8
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH-----HHcCCe
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF-----TLAGLS 191 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~-----~~~G~~ 191 (350)
....+|++.++++. |. +++++ +++|++|+..+ ++++.+||.|++++|+|......+ +..|++
T Consensus 67 p~~~~l~~~la~l~-g~-------~~~~~--~~sG~~Ai~~~---~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~ 133 (400)
T 3nmy_A 67 PTRFAYERCVAALE-GG-------TRAFA--FASGMAATSTV---MELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLD 133 (400)
T ss_dssp HHHHHHHHHHHHHH-TC-------SEEEE--ESSHHHHHHHH---HTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCE
T ss_pred HHHHHHHHHHHHHh-CC-------CCEEE--ecCHHHHHHHH---HHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeE
Confidence 34567888888874 32 24555 77779998762 456789999999999998555443 446999
Q ss_pred EEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 192 VKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 192 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
++.++. .|++.+++.++++ ..++++.+|+||||.+++ +++|+++|+++|+++|+||+|.......
T Consensus 134 ~~~v~~-------~d~~~l~~~i~~~---~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~-- 198 (400)
T 3nmy_A 134 FSFVDL-------TDPAAFKAAIRAD---TKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR-- 198 (400)
T ss_dssp EEEECT-------TSHHHHHHHCCTT---EEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC--
T ss_pred EEEECC-------CCHHHHHHHhccC---CCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC--
Confidence 988876 2789999988653 348888999999999996 7888999999999999999997433221
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCccCcceeE-EEEeeCChhHHHHHHHHHHHhhcccccCCChhHHHHHHHHh
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGA-LSIVCKTADVAGRVESQVKLVIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~-l~~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~i~~~~L 347 (350)
+. .. ...+++.|+||.++.+|.++|+ ++ ++.+++ +.+++.........+.+.+.+.++...+
T Consensus 199 ----~~----~~-g~div~~S~sK~l~g~g~~~gG~~v-v~~~~~----~~~~l~~~~~~~g~~~~~~~a~~~l~~l 261 (400)
T 3nmy_A 199 ----PL----SL-GADLVVHSATKYLNGHSDMVGGIAV-VGDNAE----LAEQMAFLQNSIGGVQGPFDSFLALRGL 261 (400)
T ss_dssp ----GG----GG-TCSEEEEETTTTTTCSSSCCCEEEE-ECSCHH----HHHHHHHHHHHHCCBCCHHHHHHHHHHH
T ss_pred ----hh----hc-CCcEEEecCccccCCCCCcceeEEE-EeCCHH----HHHHHHHHHHhcCCCCCHHHHHHHHHhH
Confidence 11 11 2458899999999989999988 43 355543 4444444444444456666666655544
No 184
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.75 E-value=1.6e-17 Score=161.73 Aligned_cols=157 Identities=12% Similarity=0.094 Sum_probs=120.3
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEE
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVK 193 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~ 193 (350)
-..+|++.+|++. |. +++++ +.||++|+.+ .+.+++.+||.|++++|.|......+ +..|++++
T Consensus 83 ~~~~le~~lA~l~-g~-------~~~i~--~ssGt~Ai~~--al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~ 150 (415)
T 2fq6_A 83 THFSLQQAMCELE-GG-------AGCVL--FPCGAAAVAN--SILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTS 150 (415)
T ss_dssp HHHHHHHHHHHHH-TC-------SEEEE--ESSHHHHHHH--HHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEE
T ss_pred hHHHHHHHHHHHh-CC-------CeEEE--eCCHHHHHHH--HHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEE
Confidence 3567999999985 42 24555 7888999988 44556789999999999998776554 45799988
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHh--cCcEEEEccCCCCCCCCCCC
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRS--KGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~--~~~~ii~DeaY~~~~~~~~~ 271 (350)
.++. .|++.+++.++++ ..+|++++|+||||.+.+ +++|+++|++ +|+++|+|++|.......
T Consensus 151 ~v~~-------~d~~~le~ai~~~---tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~~-- 215 (415)
T 2fq6_A 151 WFDP-------LIGADIVKHLQPN---TKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLFK-- 215 (415)
T ss_dssp EECT-------TCGGGGGGGCCTT---EEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSSC--
T ss_pred EECC-------CCHHHHHHhhccC---CcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccCC--
Confidence 8765 2788888888653 348888999999999997 5788999999 999999999998654321
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeC
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCK 312 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~ 312 (350)
++ .. ...+++.|++|.++.+|.++ ||++ ++
T Consensus 216 ----p~----~~-g~Div~~S~sK~lg~~g~~~~G~l~--~~ 246 (415)
T 2fq6_A 216 ----AL----DF-GIDVSIQAATKYLVGHSDAMIGTAV--CN 246 (415)
T ss_dssp ----GG----GG-TCSEEEEETTTTTTCSSSCCCEEEE--EC
T ss_pred ----cc----cc-CCeEEEEeCccccCCCCCceEEEEE--eC
Confidence 11 11 23588999999999888775 7766 55
No 185
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.75 E-value=1.5e-17 Score=160.61 Aligned_cols=160 Identities=16% Similarity=0.101 Sum_probs=113.6
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh----cCCCE-EEEcCCCCCChHHHHH----H
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH----YHQRT-IYIPQPTWGNHPKVFT----L 187 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~----~~gd~-Vlv~~P~y~~~~~~~~----~ 187 (350)
....++++.+++++ |.+ +++|++ |+|+++++.++...+..+ .+||. |+++.++|+.+...+. .
T Consensus 71 ~~~~~l~~~la~~~-g~~-----~~~v~~--~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~ 142 (416)
T 1qz9_A 71 DLSERLGNRLATLI-GAR-----DGEVVV--TDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADM 142 (416)
T ss_dssp GHHHHHHHHHHTTT-TCC-----TTSEEE--CSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCC-----cccEEE--eCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHH
Confidence 34578888888874 432 578988 999999997643322112 78886 5555667775544332 2
Q ss_pred c--CCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCC
Q 018820 188 A--GLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGF 265 (350)
Q Consensus 188 ~--G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~ 265 (350)
. |++++.+++ ++.+++.+.. +..++++++|+||||..++ +++|.++|+++|+++|+|++|..-
T Consensus 143 ~~~g~~~~~v~~---------~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g 207 (416)
T 1qz9_A 143 LQQGYTLRLVDS---------PEELPQAIDQ---DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAG 207 (416)
T ss_dssp HCSSCEEEEESS---------GGGHHHHCST---TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT
T ss_pred hcCCceEEEeCc---------HHHHHHHhCC---CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEcccccc
Confidence 3 998888765 6678887764 3458889999999999998 688899999999999999999732
Q ss_pred CCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce-eEEEEeeC
Q 018820 266 ASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV-GALSIVCK 312 (350)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv-G~l~~v~~ 312 (350)
... . ....+ + ..+++.|++|.++ +|.|+ ||++ ++
T Consensus 208 ~~~---~---~~~~~---~-~d~~~~s~~K~l~-~g~~~~g~l~--~~ 242 (416)
T 1qz9_A 208 AVP---V---DLHQA---G-ADYAIGCTYKYLN-GGPGSQAFVW--VS 242 (416)
T ss_dssp TSC---C---CHHHH---T-CSEEEECSSSTTC-CCTTCCCEEE--EC
T ss_pred CcC---C---Chhhc---C-CCEEEecCcccCC-CCCCCeEEEE--EC
Confidence 111 1 12111 1 3477889999985 78998 9988 65
No 186
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.75 E-value=4.8e-17 Score=158.31 Aligned_cols=240 Identities=14% Similarity=0.067 Sum_probs=143.8
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHH-HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAE-QQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~-~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+...+|+..|.....-|. . .|.|.++. +.+. ......| +.....+|.+.++++. + . .++|++ ++
T Consensus 51 ~g~~ylD~~~~~~~~~lG~-~-~p~v~~A~~~~~~--~~~~~~~-~~~~~~~la~~l~~~~-~---~---~~~v~~--~~ 116 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGH-N-HPAIRQAVIEAVE--RGLSFGA-PTEMEVKMAQLVTDLV-P---T---MDMVRM--VN 116 (429)
T ss_dssp TCCEEEESSGGGTTCTTCB-T-CHHHHHHHHHHHT--TCSCCSS-CCHHHHHHHHHHHHHS-T---T---CSEEEE--ES
T ss_pred CCCEEEECCCchhccccCC-C-CHHHHHHHHHHHH--hCcccCC-CCHHHHHHHHHHHhhC-C---C---CCEEEE--eC
Confidence 3556899998865333332 2 34444444 4443 2222334 4444566777777663 2 1 578999 99
Q ss_pred CchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-HcCC-------------------eEEEEEeecCCCCCCCHHH
Q 018820 150 SGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-LAGL-------------------SVKSYRYYDPATRGLNFQG 209 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~~G~-------------------~~~~v~~~~~~~~~~d~~~ 209 (350)
||++|+..+..+.....+++.|++.+++|..+..... ..|. .+..+++ .|++.
T Consensus 117 sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~ 189 (429)
T 4e77_A 117 SGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLAS 189 (429)
T ss_dssp SHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECT-------TCHHH
T ss_pred cHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCC-------CCHHH
Confidence 9999998865443233466889999999987754211 1111 1112211 28999
Q ss_pred HHHHhhcCCCCcEEEEecCCCCCCCCCC--CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcE
Q 018820 210 LLEDLGSAPAGAIVLLHACAHNPTGVDP--TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGEC 287 (350)
Q Consensus 210 l~~~l~~~~~~~~~l~~~~p~NPTG~~~--s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~v 287 (350)
+++.+++.+.+. .+++++|+||+|-++ +++.+++|.++|++||+++|+||+|.+|..+. ......+ .....+
T Consensus 190 le~~l~~~~~~~-~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~----~~~~~~~-~~~pdi 263 (429)
T 4e77_A 190 VRQAFEQYPQEV-ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVAL----AGAQDYY-HVIPDL 263 (429)
T ss_dssp HHHHHHHSTTTE-EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBT----TCHHHHT-TCCCSE
T ss_pred HHHHHHhcCCCE-EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCc----chHHHhc-CCCCCe
Confidence 999987643333 344567787776443 45569999999999999999999999983331 1122222 111233
Q ss_pred EEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh---hcccccCCChhHHHHHHHHhc
Q 018820 288 FIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV---IRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 288 i~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~q~i~~~~L~ 348 (350)
.||||.++ +|+|+||++ ++ +++++.+... ......+.+.+++.++...|+
T Consensus 264 ---~t~sK~~~-~G~~~G~~~--~~-----~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~ 316 (429)
T 4e77_A 264 ---TCLGKIIG-GGMPVGAFG--GR-----REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLT 316 (429)
T ss_dssp ---EEEEGGGG-TTSCCEEEE--EC-----HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHH
T ss_pred ---eeeccccc-CCCCeEEEE--EC-----HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHH
Confidence 48999999 899999977 76 5566555432 112223566777776665553
No 187
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=1.2e-17 Score=163.17 Aligned_cols=182 Identities=15% Similarity=0.201 Sum_probs=130.9
Q ss_pred CCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcC-CCCCChHHH-----
Q 018820 111 KEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQ-PTWGNHPKV----- 184 (350)
Q Consensus 111 ~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~-P~y~~~~~~----- 184 (350)
+.|+. .|..+|++.+|++. |. +..++..|+.||++|+.+ .+.+++.|||+|++++ |.|..+..+
T Consensus 69 y~Y~~-~g~~~Le~~lA~l~-g~------e~alv~p~~~sGt~A~~~--al~all~pGD~Vl~~~~~~y~~~~~~~g~~~ 138 (427)
T 3hvy_A 69 YGYND-IGRDSLDRVYANIF-NT------ESAFVRPHFVNGTHAIGA--ALFGNLRPNDTMMSICGMPYDTLHDIIGMDD 138 (427)
T ss_dssp TCTTC-HHHHHHHHHHHHHH-TC------SEEEEETTCCSHHHHHHH--HHHHTCCTTCEEEECSSSCCGGGHHHHTCCT
T ss_pred CCCCc-hhHHHHHHHHHHHh-CC------CceEEeCCCCcHHHHHHH--HHHHhcCCCCEEEEeCCCCchhHHHHhcccc
Confidence 44544 37888999999885 43 122221126888999977 4567789999999999 999988744
Q ss_pred ------HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecC----CCCCCCCCCCHHHHHHHHHHHHh--c
Q 018820 185 ------FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHAC----AHNPTGVDPTLQQWERIRQLMRS--K 252 (350)
Q Consensus 185 ------~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~----p~NPTG~~~s~~~~~~i~~~~~~--~ 252 (350)
++..|++++.++. + ++.+|++.+++.+++.+ +..+|++++ |+||||. ..++++|+++|++ +
T Consensus 139 ~~~~~~l~~~G~~~~~v~~-~--~~~~d~e~l~~~i~~~~-~tklV~i~~s~gyp~nptg~---v~dl~~i~~ia~~~~~ 211 (427)
T 3hvy_A 139 SKKVGSLREYGVKYKMVDL-K--DGKVDINTVKEELKKDD-SIKLIHIQRSTGYGWRKSLR---IAEIAEIIKSIREVNE 211 (427)
T ss_dssp TCCSCCTGGGTCEEEECCC-B--TTBCCHHHHHHHHHHCT-TEEEEEEESSCCSSSSCCCC---HHHHHHHHHHHHHHCS
T ss_pred chhhhHHHHcCCEEEEecC-C--CCCcCHHHHHHHhhCCC-CCEEEEEECCCCCCCCcccc---HHHHHHHHHHHHHhCC
Confidence 4567999999887 3 46799999999997321 233667777 8888874 5789999999999 8
Q ss_pred CcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHH
Q 018820 253 GLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKL 326 (350)
Q Consensus 253 ~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~ 326 (350)
|+++++|++|..+.+.. . +. .. ...|+++|+||++|..| .+.||++ ++ +++++++..
T Consensus 212 g~~livD~a~~~~~~~~--~---p~----~~-gaDiv~~S~sK~lgg~g~~~GG~i~--~~-----~~li~~l~~ 269 (427)
T 3hvy_A 212 NVIVFVDNCYGEFVEEK--E---PT----DV-GADIIAGSLIKNIGGGIATTGGYIA--GK-----EEYVTQATF 269 (427)
T ss_dssp SSEEEEECTTCTTTSSS--C---GG----GG-TCSEEEEETTSGGGTTTCCSCEEEE--EC-----HHHHHHHHH
T ss_pred CCEEEEECCccccccCC--C---Cc----cc-CCeEEEECCcccccccccceEEEEE--EC-----HHHHHHHHH
Confidence 99999999999887431 1 11 11 13488999999998555 4567766 65 445555544
No 188
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.74 E-value=2e-17 Score=157.24 Aligned_cols=186 Identities=11% Similarity=0.055 Sum_probs=134.1
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH---hcCCC
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR---HYHQR 169 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~---~~~gd 169 (350)
.+.+.++..... .. ..|.|..+..+||+++++++ |. +++++ |+|+++|+.++ +.+. +.+||
T Consensus 12 ~~~v~~a~~~~~--~~--~~~~~~~~~~~l~~~la~~~-~~-------~~v~~--~~ggt~al~~~--~~~~~~~~~~gd 75 (375)
T 2fnu_A 12 DKEDKKAVLEVL--NS--KQLTQGKRSLLFEEALCEFL-GV-------KHALV--FNSATSALLTL--YRNFSEFSADRN 75 (375)
T ss_dssp CHHHHHHHHHHH--TS--SCCSSSHHHHHHHHHHHHHH-TC-------SEEEE--ESCHHHHHHHH--HHHSSCCCTTSC
T ss_pred CHHHHHHHHHHH--Hc--CcccCChHHHHHHHHHHHHh-CC-------CeEEE--eCCHHHHHHHH--HHHhcccCCCCC
Confidence 444555555544 11 12445667899999999986 43 27888 99999999884 4455 67899
Q ss_pred EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHH
Q 018820 170 TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLM 249 (350)
Q Consensus 170 ~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~ 249 (350)
+|++++|+|..+...++..|++++.+++ ++++ .+|++.+++.++++ ..++++++| ||...+ +++|.++|
T Consensus 76 ~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~-~~d~~~l~~~i~~~---~~~v~~~~~---tG~~~~---l~~i~~l~ 144 (375)
T 2fnu_A 76 EIITTPISFVATANMLLESGYTPVFAGI-KNDG-NIDELALEKLINER---TKAIVSVDY---AGKSVE---VESVQKLC 144 (375)
T ss_dssp EEEECSSSCTHHHHHHHHTTCEEEECCB-CTTS-SBCGGGSGGGCCTT---EEEEEEECG---GGCCCC---HHHHHHHH
T ss_pred EEEECCCccHhHHHHHHHCCCEEEEecc-CCCC-CCCHHHHHhhcCcC---ceEEEEeCC---cCCccC---HHHHHHHH
Confidence 9999999999999999999999999998 5544 68999998887643 335555443 999987 57889999
Q ss_pred HhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc--cccCccCcceeEEEEee-CChhHHHH
Q 018820 250 RSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA--KNLGLYGERVGALSIVC-KTADVAGR 319 (350)
Q Consensus 250 ~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S--K~~gl~G~RvG~l~~v~-~~~~~~~~ 319 (350)
+++|+++|+|++|..+.... . ..+...+ .+.+.||| |.++. | +||++ + ++++..++
T Consensus 145 ~~~~~~li~D~a~~~~~~~~---~----~~~~~~~--~i~~~s~s~~K~~~~-g--~g~~~--~~~~~~~~~~ 203 (375)
T 2fnu_A 145 KKHSLSFLSDSSHALGSEYQ---N----KKVGGFA--LASVFSFHAIKPITT-A--EGGAV--VTNDSELHEK 203 (375)
T ss_dssp HHHTCEEEEECTTCTTCEET---T----EETTSSS--SEEEEECCTTSSSCC-S--SCEEE--EESCHHHHHH
T ss_pred HHcCCEEEEECccccCCeEC---C----eeccccC--CeEEEeCCCCCCccc-c--CceEE--EeCCHHHHHH
Confidence 99999999999997654321 0 0111111 37888999 99974 6 78877 5 44443333
No 189
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.74 E-value=1.7e-17 Score=160.14 Aligned_cols=153 Identities=14% Similarity=0.165 Sum_probs=99.6
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH---HHHHcC--CeEEEEEeecCCCCCCCHHHHHHHh
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK---VFTLAG--LSVKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
+++|++ ++| ++++.++ +.+.+.+||+|++++|+|..+.. .+...| +.++.++. + +++.+|++.+++.+
T Consensus 88 ~~~i~~--~sG-t~a~~~~--~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~~~d~~~l~~~i 160 (417)
T 3n0l_A 88 FANVQP--NSG-SQANQGV--YAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGV-E-LDGRIDYEKVREIA 160 (417)
T ss_dssp EEECCC--SSH-HHHHHHH--HHHHSCTTCEEEEECC----------------CCSEEEEECC-C-TTSSCCHHHHHHHH
T ss_pred CcceEe--ccH-HHHHHHH--HHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccC-C-CCCCcCHHHHHHHH
Confidence 456765 766 8999884 44557899999999999987654 333334 44555555 4 55779999999999
Q ss_pred h-cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHHHHHhhcCCcEEEEec
Q 018820 215 G-SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSVRMFVADGGECFIAQS 292 (350)
Q Consensus 215 ~-~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 292 (350)
. .+++ ++++++|+| |..++ +++|.++|++||+++|+||++. ++.+.+. .... + ....+++.|
T Consensus 161 ~~~~~~---~v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~--~~~~---~---~~~di~~~s 224 (417)
T 3n0l_A 161 KKEKPK---LIVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGE--HPSP---F---PYAHVVSST 224 (417)
T ss_dssp HHHCCS---EEEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTS--SCCC---T---TTCSEEEEE
T ss_pred HhcCCe---EEEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhccc--CCCc---c---ccceEEEee
Confidence 7 3444 666777776 77777 7888999999999999999953 3333220 0000 0 023488999
Q ss_pred cccccCccCcceeEEEEeeCChhHHHH
Q 018820 293 YAKNLGLYGERVGALSIVCKTADVAGR 319 (350)
Q Consensus 293 ~SK~~gl~G~RvG~l~~v~~~~~~~~~ 319 (350)
|||.+ +|+|+||++ +++++..+.
T Consensus 225 ~sK~l--~g~~~G~~~--~~~~~~~~~ 247 (417)
T 3n0l_A 225 THKTL--RGPRGGIIM--TNDEELAKK 247 (417)
T ss_dssp SSTTT--CSCSCEEEE--ESCHHHHHH
T ss_pred Ccccc--CCCCeeEEE--ECCHHHHHH
Confidence 99987 799999988 876544333
No 190
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.74 E-value=1.2e-16 Score=158.20 Aligned_cols=254 Identities=13% Similarity=0.073 Sum_probs=157.0
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...|||..|..-..-|. .+..+++++.+++. . ..+ |....+..+.++++++++..... ...++|++ ++|
T Consensus 52 ~G~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~--~-~~~-~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~--~~s 122 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVGY-GRREIVDAMAHQAM--V-LPY-ASPWYMATSPAARLAEKIATLTP--GDLNRIFF--TTG 122 (476)
T ss_dssp TCCEEEETTHHHHTCTTCB-CCHHHHHHHHHHHH--H-CCC-CCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEE--ESS
T ss_pred CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHH--h-ccC-cccCccCCHHHHHHHHHHHhcCC--CCcCEEEE--eCc
Confidence 3556899998844223332 22334444444443 1 112 22225667888888888654321 22578998 999
Q ss_pred chhHHHHHHHHHHHh------cCCCEEEEcCCCCCChHHHHHHcCCe-------------EEEEEee-cCCCCCCC----
Q 018820 151 GTGSLRVGAEFLARH------YHQRTIYIPQPTWGNHPKVFTLAGLS-------------VKSYRYY-DPATRGLN---- 206 (350)
Q Consensus 151 ~~~al~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~~-------------~~~v~~~-~~~~~~~d---- 206 (350)
|++|+..+..+.... ..++.|++.+|+|..+.......+.. +..++.. ....+..|
T Consensus 123 GseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 202 (476)
T 3i5t_A 123 GSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAF 202 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHH
Confidence 999998865443222 33579999999999887655433221 2222210 10001222
Q ss_pred ----HHHHHHHhhcC-CCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHH-H
Q 018820 207 ----FQGLLEDLGSA-PAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVR-M 279 (350)
Q Consensus 207 ----~~~l~~~l~~~-~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~-~ 279 (350)
++.+++.+++. +.+.+++++.+++|++|. +++++.+++|.++|++||+++|+||+|.+|...+ + ..... .
T Consensus 203 ~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G--~-~~~~~~~ 279 (476)
T 3i5t_A 203 LDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCG--E-WFASEKV 279 (476)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS--S-SCHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccc--C-ceeeecc
Confidence 77888887642 233457777777888885 8899999999999999999999999999986543 1 11222 2
Q ss_pred HhhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHHHh-------hcccccCCChhHHHHHHHHhc
Q 018820 280 FVADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVKLV-------IRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+ .....++ +|||.++ .| +|+||++ ++ +++.+.+... ......+.+.+++.++...|+
T Consensus 280 ~-~v~pdi~---t~sK~l~-~G~~plg~v~--~~-----~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~ 344 (476)
T 3i5t_A 280 F-GVVPDII---TFAKGVT-SGYVPLGGLA--IS-----EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIE 344 (476)
T ss_dssp T-CCCCSEE---EECGGGG-TTSSCCEEEE--EC-----HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHH
T ss_pred c-CCCcchh---hhhhhhc-CCCcCeEEEE--EC-----HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHH
Confidence 1 1122343 6899998 59 9999987 76 5676666542 222233566777776666553
No 191
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.73 E-value=2.7e-17 Score=161.54 Aligned_cols=217 Identities=12% Similarity=0.098 Sum_probs=136.1
Q ss_pred CCCCeEEeecccc-cCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAY-RTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~-~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+.+.++|+.|.+ -|.....++ +.+.++...... .. ...|.+..|..+||+++++++ +. +++++ |+
T Consensus 30 ~g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~-~~-~~~y~~~~~~~~l~~~la~~~-~~-------~~v~~--t~ 96 (467)
T 2oqx_A 30 SGMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMM-RG-DEAYSGSRSYYALAESVKNIF-GY-------QYTIP--TH 96 (467)
T ss_dssp TTSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTT-SC-CCCSSSCHHHHHHHHHHHHHH-CC-------SEEEE--EC
T ss_pred cCCCceeccCCCeeEecccCCCc-HHHHHHHHHHhc-cC-cceeccCchhHHHHHHHHHHh-Cc-------CcEEE--cC
Confidence 3456677777753 111111111 333333333321 22 235888888999999999996 42 57888 99
Q ss_pred CchhHHHHHHHHHHHhcC-----C----CEEEEcCCCCCChHHHHHHcCCeEEEEEee---cC-----CCCCCCHHHHHH
Q 018820 150 SGTGSLRVGAEFLARHYH-----Q----RTIYIPQPTWGNHPKVFTLAGLSVKSYRYY---DP-----ATRGLNFQGLLE 212 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~-----g----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~---~~-----~~~~~d~~~l~~ 212 (350)
||++|+.++. .....+ | |.|++..+.|..+.......|..++..... +. .++.+|++.+++
T Consensus 97 ~gt~A~~~al--~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~ 174 (467)
T 2oqx_A 97 QGRGAEQIYI--PVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLER 174 (467)
T ss_dssp --CCSHHHHH--HHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHH
T ss_pred CcHHHHHHHH--HHHhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHH
Confidence 9999998854 333456 7 888877555555566667777776654210 11 235689999999
Q ss_pred HhhcCC-CCcEEEEecCCCCCC-CCCCCHHHHHHHHHHHHhcCcEEEEccCCCC----------CCCCCCCCchHHHHHH
Q 018820 213 DLGSAP-AGAIVLLHACAHNPT-GVDPTLQQWERIRQLMRSKGLLPFFDSAYQG----------FASGSLDSDAQSVRMF 280 (350)
Q Consensus 213 ~l~~~~-~~~~~l~~~~p~NPT-G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~----------~~~~~~~~~~~~~~~~ 280 (350)
.+++.. .+..+|++++||||| |.+++.+++++|+++|++||+++|+|++... ..+.+ .+ ...+
T Consensus 175 ~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g--~~---~~~~ 249 (467)
T 2oqx_A 175 GIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKD--WT---IEQI 249 (467)
T ss_dssp HHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTT--SC---HHHH
T ss_pred HHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccC--cc---HHHH
Confidence 997421 122377788999998 9999999999999999999999999943211 12222 11 2222
Q ss_pred h----hcCCcEEEEeccccccCcc-CcceeEEEEeeCCh
Q 018820 281 V----ADGGECFIAQSYAKNLGLY-GERVGALSIVCKTA 314 (350)
Q Consensus 281 ~----~~~~~vi~~~S~SK~~gl~-G~RvG~l~~v~~~~ 314 (350)
. ... .+ ++.|+||.+|++ | ||++ +++.
T Consensus 250 ~~~~~~~~-d~-~~~s~sK~~g~~~G---g~~~--~~~~ 281 (467)
T 2oqx_A 250 TRETYKYA-DM-LAMSAKKDAMVPMG---GLLC--MKDD 281 (467)
T ss_dssp HHHHGGGC-SE-EEEESSSTTCCSSC---EEEE--ECSG
T ss_pred hhhhhccC-Ce-EEEecccccCCCCc---eEEE--ecCh
Confidence 2 122 23 478999999876 3 6655 6544
No 192
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.73 E-value=1.7e-17 Score=162.85 Aligned_cols=199 Identities=13% Similarity=0.060 Sum_probs=136.9
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhc---
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHY--- 166 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~--- 166 (350)
.+.+.++.....+. ....|....|..++.+++.++ ++|.+........+++ |+|+++|+.++. ++...
T Consensus 55 ~~~v~e~~~~a~~~--~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~--t~ggtea~~~al--~a~~~~~~ 128 (452)
T 2dgk_A 55 DENVHKLMDLSINK--NWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTN--TIGSSEACMLGG--MAMKWRWR 128 (452)
T ss_dssp CHHHHHHHHHTTTC--BTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEE--ESSHHHHHHHHH--HHHHHHHH
T ss_pred hHHHHHHHHHHhcc--CCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEE--eCCHHHHHHHHH--HHHHHHHH
Confidence 35566665544411 123355566777788777766 3454311000013777 999999998743 33222
Q ss_pred -----CC-----CEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCC
Q 018820 167 -----HQ-----RTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD 236 (350)
Q Consensus 167 -----~g-----d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~ 236 (350)
+| +.|++++ +|..|...++..|++++.+|. +++++.+|++.+++.+.+. ..+|++++|+||||.+
T Consensus 129 ~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~-~~~~~~~d~~~l~~~i~~~---t~~v~~~~~~n~tG~~ 203 (452)
T 2dgk_A 129 KRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPM-RPGQLFMDPKRMIEACDEN---TIGVVPTFGVTYTGNY 203 (452)
T ss_dssp HHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCC-BTTBCSCCHHHHHHHCCTT---EEEEECBBSCTTTCBB
T ss_pred HHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEec-CCCCCeECHHHHHHHHhhC---CEEEEEEcCCcCCccc
Confidence 44 5899999 999999999999999999998 5545889999999999754 3588899999999999
Q ss_pred CCHHHHHHHHHHHHhc------CcEEEEccCCCCCCC---CCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEE
Q 018820 237 PTLQQWERIRQLMRSK------GLLPFFDSAYQGFAS---GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGAL 307 (350)
Q Consensus 237 ~s~~~~~~i~~~~~~~------~~~ii~DeaY~~~~~---~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l 307 (350)
.+ +++|+++|+++ ++++++|++|.++.. .. + . .. .+ ....-.++..|++| +++.|+|+||+
T Consensus 204 ~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~--~-~-~~-~~-~~~~~d~~~~~~hK-~~~~~~~~G~~ 273 (452)
T 2dgk_A 204 EF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAP--D-I-VW-DF-RLPRVKSISASGHK-FGLAPLGCGWV 273 (452)
T ss_dssp CC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT--T-C-CC-ST-TSTTEEEEEEETTT-TTCCCSSCEEE
T ss_pred CC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCc--c-c-hh-hc-CCCCCcEEEECccc-ccCCCCCeEEE
Confidence 65 56778888884 999999999998753 11 0 0 00 01 11112345678899 66799999998
Q ss_pred EEeeCCh
Q 018820 308 SIVCKTA 314 (350)
Q Consensus 308 ~~v~~~~ 314 (350)
+ +.++
T Consensus 274 ~--~~~~ 278 (452)
T 2dgk_A 274 I--WRDE 278 (452)
T ss_dssp E--ESSG
T ss_pred E--EcCH
Confidence 8 7654
No 193
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.73 E-value=1.1e-16 Score=153.94 Aligned_cols=172 Identities=16% Similarity=0.123 Sum_probs=124.1
Q ss_pred CCcHHHHHHH-HHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hcCCCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 117 VGLAEFNKLS-AKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HYHQRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 117 ~G~~~lr~ai-a~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
....+|++++ |+++ |. .+++++ +.||++|+.++ +.+. +.+||+|++++|+|..+...++..|++++.
T Consensus 36 ~~~~~l~~~~~a~~~-g~------~~~~v~--~~sgt~al~~a--l~~l~~~~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~ 104 (377)
T 3ju7_A 36 PINQRFEQTIMSGFF-QN------RGAVTT--VANATLGLMAA--IQLKKRKKGKYALMPSFTFPATPLAAIWCGLEPYF 104 (377)
T ss_dssp HHHHHHHHHHHHHTS-TT------CSEEEE--ESCHHHHHHHH--HHHHSCTTCCEEEEESSSCTHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHh-CC------CCeEEE--eCCHHHHHHHH--HHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 3478999999 9984 42 345666 89999999884 4555 679999999999999999999999999999
Q ss_pred EEeecCCCCCCCHHHHHHHh-hcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 195 YRYYDPATRGLNFQGLLEDL-GSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~~l-~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
++. +++++.+|++.+++.+ +.++ +..+++ |+||||...+ +++|.++|+ +|+++|+|++|......+ .
T Consensus 105 v~~-~~~~~~~d~~~l~~~i~~~~~-~tk~v~---~~~~~G~~~~---~~~i~~la~-~~~~vi~D~a~a~g~~~~--~- 172 (377)
T 3ju7_A 105 IDI-SIDDWYMDKTVLWDKIEELKE-EVAIVV---PYATFGSWMN---LEEYEELEK-KGVPVVVDAAPGFGLMNG--G- 172 (377)
T ss_dssp ECB-CTTTCSBCHHHHHHHHHHHGG-GEEEEC---CBCGGGBCCC---CHHHHHHHH-TTCCBEEECTTCTTCEET--T-
T ss_pred Eec-CCccCCcCHHHHHHHHhcCCC-CceEEE---EECCCCCccC---HHHHHHHHh-cCCEEEEECCCccCCeEC--C-
Confidence 998 6667899999999988 4331 123554 7899999876 566788888 999999999986433211 0
Q ss_pred hHHHHHHhhcCCcEEEEec--cccccCccCcceeEEEEeeCChhHHHHH
Q 018820 274 AQSVRMFVADGGECFIAQS--YAKNLGLYGERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S--~SK~~gl~G~RvG~l~~v~~~~~~~~~~ 320 (350)
.... ...++ +.+.| .+|.++. | +.|+++ +++++..+++
T Consensus 173 -~~~g--~~~~d--~~~~S~~~~K~l~~-g-~gG~~~--~~~~~l~~~~ 212 (377)
T 3ju7_A 173 -MHYG--QDFSG--MIIYSFHATKPFGI-G-EGGLIY--SKNEEDIQRI 212 (377)
T ss_dssp -EETT--TTCSS--EEEEECBTTSSSCC-B-SCEEEE--ESCHHHHHHH
T ss_pred -Eecc--CCCCc--EEEEECCCCCcCCC-C-CcEEEE--ECCHHHHHHH
Confidence 0110 00112 34555 4699984 6 678876 7776544433
No 194
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.73 E-value=5.2e-19 Score=167.41 Aligned_cols=155 Identities=14% Similarity=0.054 Sum_probs=109.1
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc-hhHHHHHHHHHHHhcC---CCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSG-TGSLRVGAEFLARHYH---QRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~-~~al~l~~~l~~~~~~---gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
..++|+.+++++ |.. . +++|++ |+|+ ++|+.++ ++++..+ ||.|+++.++|.. ...++..| +++.
T Consensus 50 ~~~l~~~la~~~-g~~-~---~~~v~~--~~g~gt~al~~~--~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~ 118 (360)
T 1w23_A 50 HEQAQNLLRELL-QIP-N---DYQILF--LQGGASLQFTML--PMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHI 118 (360)
T ss_dssp HHHHHHHHHHHH-TCC-T---TEEEEE--ESSHHHHHHHHH--HHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEE
T ss_pred HHHHHHHHHHHh-CCC-C---CceEEE--ECCcchHHHHHH--HHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEE
Confidence 456778887775 542 1 468888 9998 9999884 3445544 5667776666543 33467789 9999
Q ss_pred EEeecCCCCCCCHHHHHH-HhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCc
Q 018820 195 YRYYDPATRGLNFQGLLE-DLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSD 273 (350)
Q Consensus 195 v~~~~~~~~~~d~~~l~~-~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~ 273 (350)
+++ +++++.+|++.+++ .+.. +..++++++|+||||.+++ ++ ++++|+++|+|++|..+... .+
T Consensus 119 v~~-~~~~~~~d~~~l~~~~i~~---~~k~v~~~~~~nptG~~~~--~i------~~~~~~~li~D~a~~~~~~~---~~ 183 (360)
T 1w23_A 119 AAS-TKANSYQSIPDFSEFQLNE---NDAYLHITSNNTIYGTQYQ--NF------PEINHAPLIADMSSDILSRP---LK 183 (360)
T ss_dssp EEE-CGGGTSCSCCCGGGCCCCT---TEEEEEEESEETTTTEECS--SC------CCCCSSCEEEECTTTTTSSC---CC
T ss_pred eec-ccccCcCCccchHhhccCC---CCCEEEEeCCCCCcceecc--cc------cccCCceEEEechhhcCCCC---cC
Confidence 998 54223378888877 6643 3457888899999999987 22 22899999999999876532 11
Q ss_pred hHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 274 AQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 274 ~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
+..+ -+++.|+||.+|++| +||++ ++
T Consensus 184 ---~~~~------di~~~s~sK~~~~~G--~G~~~--~~ 209 (360)
T 1w23_A 184 ---VNQF------GMIYAGAQKNLGPSG--VTVVI--VK 209 (360)
T ss_dssp ---GGGC------SEEEEETTTTTSCTT--CEEEE--EE
T ss_pred ---cccC------CEEEEEcccccCCCC--cEEEE--Ec
Confidence 1111 278999999999666 99988 66
No 195
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.72 E-value=1.2e-16 Score=156.41 Aligned_cols=159 Identities=15% Similarity=0.123 Sum_probs=123.2
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH----HHHHcCC
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK----VFTLAGL 190 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~----~~~~~G~ 190 (350)
+.....+|++.++++. |. +. .++ +++|++|+.+ .+.+.+.+||.|++++|+|..+.. .++..|+
T Consensus 80 ~~p~~~~le~~lA~l~-g~------~~-~v~--~~sG~~Ai~~--al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~ 147 (430)
T 3ri6_A 80 SNPTVEDLEQRLKNLT-GA------LG-VLA--LGSGMAAIST--AILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGI 147 (430)
T ss_dssp CCHHHHHHHHHHHHHH-TC------SE-EEE--ESCHHHHHHH--HHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTC
T ss_pred CCHHHHHHHHHHHHHH-CC------Cc-EEE--ECCHHHHHHH--HHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCC
Confidence 3456688999999975 43 22 344 6677899887 455668899999999999998877 5678999
Q ss_pred eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCC
Q 018820 191 SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSL 270 (350)
Q Consensus 191 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~ 270 (350)
+++.++. + |++.+++.++++ ..+|++++|+||||.+++ +++|+++|+++|+++|+|++|.......
T Consensus 148 ~~~~v~~-~------d~~~l~~ai~~~---t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~- 213 (430)
T 3ri6_A 148 EVRFVDV-M------DSLAVEHACDET---TKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLE- 213 (430)
T ss_dssp EEEEECT-T------CHHHHHHHCCTT---EEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCC-
T ss_pred EEEEeCC-C------CHHHHHHhhCCC---CeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC-
Confidence 9999876 2 899999988653 348889999999999997 5678899999999999999998654321
Q ss_pred CCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEE
Q 018820 271 DSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 271 ~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
+. ..+ ..+++.|+||.++-+|..+|.+++
T Consensus 214 -----~~----~~g-~div~~S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 214 -----AK----RLG-VDIEVLSSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp -----GG----GGT-CSEEEEECCCEEETTEEECCEEEE
T ss_pred -----hH----HcC-CEEEEECCcccccCCCCceEEEEE
Confidence 11 112 357899999999878888888773
No 196
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.72 E-value=3.3e-16 Score=154.90 Aligned_cols=255 Identities=12% Similarity=0.026 Sum_probs=150.7
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+...|||..|..-..-|. .+..+++++.+++.. . .+.|....+..+.+.++++.+...- +...++|++ ++|
T Consensus 53 ~G~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~~~~--~-~~~~~~~~~~~~~~~~lae~l~~~~--~~~~~~v~~--~~s 124 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGY-GRDELAEVAARQMRE--L-PYYNTFFKTTHVPAIALAQKLAELA--PGDLNHVFF--AGG 124 (472)
T ss_dssp TCCEEECTTHHHHTCTTCB-CCHHHHHHHHHHHHH--C-SCCCSSSSEECHHHHHHHHHHHHHS--CTTEEEEEE--ESS
T ss_pred CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHh--c-cccccccccCCHHHHHHHHHHHHhC--CCCCCEEEE--eCC
Confidence 3556899998843223332 123444444444441 1 1123333344445555555432110 011568998 999
Q ss_pred chhHHHHHHHHHHHh------cCCCEEEEcCCCCCChHHHHHHcCC------------eEEEEEe---ecCCCCCCC---
Q 018820 151 GTGSLRVGAEFLARH------YHQRTIYIPQPTWGNHPKVFTLAGL------------SVKSYRY---YDPATRGLN--- 206 (350)
Q Consensus 151 ~~~al~l~~~l~~~~------~~gd~Vlv~~P~y~~~~~~~~~~G~------------~~~~v~~---~~~~~~~~d--- 206 (350)
|++|+..+..+.... .+++.|++.+|+|..+.......+. .++.++. +..+.+ .|
T Consensus 125 GseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~ 203 (472)
T 3hmu_A 125 GSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEE 203 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHH
Confidence 999998865443222 1468999999999988765544332 2334442 110111 34
Q ss_pred -----HHHHHHHhhcCC-CCcEEEEecCCCCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHH
Q 018820 207 -----FQGLLEDLGSAP-AGAIVLLHACAHNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRM 279 (350)
Q Consensus 207 -----~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~ 279 (350)
++.+++.+++.. .+.++|++..++|++|..+ +++.+++|.++|++||+++|+||+|.+|...+ + ......
T Consensus 204 ~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G--~-~~a~~~ 280 (472)
T 3hmu_A 204 FGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTG--N-WFGTQT 280 (472)
T ss_dssp HHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS--S-SCHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccC--c-cchhHH
Confidence 677887776422 3345666655667777655 89999999999999999999999999986433 1 122222
Q ss_pred HhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHH--hhcccccCCChhHHHHHHHHhc
Q 018820 280 FVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKL--VIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 280 ~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+ .....++ +|||.++..|+|+||++ ++ +++.+.+.. .......+.+.+++.++...|+
T Consensus 281 ~-~v~pdi~---t~sK~l~gg~~plG~v~--~~-----~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~ 340 (472)
T 3hmu_A 281 M-GIRPHIM---TIAKGLSSGYAPIGGSI--VC-----DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLR 340 (472)
T ss_dssp H-TCCCSEE---EECGGGTTTSSCCEEEE--EE-----HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHH
T ss_pred h-CCCCcee---eechhhhcCCcceEEEE--EC-----HHHHHhcccCCccccCCCCCCHHHHHHHHHHHH
Confidence 2 2222444 58999985559999987 76 566666621 1222234566777777666554
No 197
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.72 E-value=6.3e-17 Score=157.63 Aligned_cols=182 Identities=18% Similarity=0.147 Sum_probs=130.8
Q ss_pred cccHHHHHHHHHHhhcCCCCCCCCCCC--CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCC
Q 018820 91 LVLNVVRKAEQQLVNDRSRVKEYLPIV--GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQ 168 (350)
Q Consensus 91 ~~~~~v~~a~~~l~~~~~~~~~Y~p~~--G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~g 168 (350)
+..+.++++...+.. ....+.|.... -..+|++.++++. |. ++.|+ +.+|++|+.++ +.+.+.+|
T Consensus 31 ~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~-g~------~~~v~---~~sGt~A~~~~--l~~~~~~g 97 (421)
T 2ctz_A 31 YVFKSPEHAANLFAL-KEFGNIYSRIMNPTVDVLEKRLAALE-GG------KAALA---TASGHAAQFLA--LTTLAQAG 97 (421)
T ss_dssp BCCSCHHHHHHHHTT-TTGGGSCBTTBCHHHHHHHHHHHHHH-TC------SEEEE---ESSHHHHHHHH--HHHHCCTT
T ss_pred eeeCCHHHHHHhhcc-ccCCCcccCCCChHHHHHHHHHHHHh-CC------CceEE---ecCHHHHHHHH--HHHHhCCC
Confidence 334455555444431 12234565433 3478999999986 43 22344 55569999884 34447899
Q ss_pred CEEEEcCCCCCChHHHH----HHcCCeEEEE-EeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHH
Q 018820 169 RTIYIPQPTWGNHPKVF----TLAGLSVKSY-RYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWE 243 (350)
Q Consensus 169 d~Vlv~~P~y~~~~~~~----~~~G~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~ 243 (350)
|.|+++.|+|..+...+ +..|++++.+ +. .|++.+++.++++ ..++++++|+||||.+++ ++
T Consensus 98 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------~d~~~l~~~i~~~---~~~v~~~~~~n~~G~~~~---l~ 164 (421)
T 2ctz_A 98 DNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE-------ERPEEFLALTDEK---TRAWWVESIGNPALNIPD---LE 164 (421)
T ss_dssp CEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT-------CCHHHHHHHCCTT---EEEEEEESSCTTTCCCCC---HH
T ss_pred CEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC-------CCHHHHHHhhccC---CeEEEEECCCCCCCcccC---HH
Confidence 99999999998877665 7789999887 65 2789999988653 347788999999999998 78
Q ss_pred HHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 244 RIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 244 ~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+|.++|+++|+++|+|++|..+.+.. + +. .. ..-+++.|++|.++.+|.|+|+++
T Consensus 165 ~i~~~a~~~g~~livD~~~~~~g~~~---~--~~----~~-~~Di~~~s~~K~l~~~g~~~G~~~ 219 (421)
T 2ctz_A 165 ALAQAAREKGVALIVDNTFGMGGYLL---R--PL----AW-GAALVTHSLTKWVGGHGAVIAGAI 219 (421)
T ss_dssp HHHHHHHHHTCEEEEECGGGGGGTSC---C--GG----GG-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred HHHHHHHHcCCEEEEECCcccccccC---C--cc----cc-CCeEEEECCcccccCCCCcEEEEE
Confidence 88999999999999999993332221 1 11 11 134789999999999999999988
No 198
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.71 E-value=5e-17 Score=158.75 Aligned_cols=168 Identities=14% Similarity=0.014 Sum_probs=127.4
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH---------hcCCCEEEEcCCCCCChHH
Q 018820 113 YLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR---------HYHQRTIYIPQPTWGNHPK 183 (350)
Q Consensus 113 Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~---------~~~gd~Vlv~~P~y~~~~~ 183 (350)
|.+..+..+||+++++++ |. + ++++ +.+|++|+.++ +.+. +.+||+|+++.|+|..+..
T Consensus 58 ~~~~~~~~~l~~~la~~~-g~------~-~~i~--~~sGt~a~~~a--l~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~ 125 (437)
T 3bb8_A 58 LTTGRFNDAFEKKLGEYL-GV------P-YVLT--TTSGSSANLLA--LTALTSPKLGVRALKPGDEVITVAAGFPTTVN 125 (437)
T ss_dssp CBSCHHHHHHHHHHHHHH-TC------S-EEEE--ESCHHHHHHHH--HHHTTCGGGGGGSCCTTCEEEECSSSCHHHHH
T ss_pred cCCChHHHHHHHHHHHHH-CC------C-cEEE--eCCHHHHHHHH--HHHhhhcccccccCCCcCEEEECCCCcHHHHH
Confidence 556678999999999996 43 2 4555 78888999884 3444 5689999999999999999
Q ss_pred HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec-CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC
Q 018820 184 VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA-CAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY 262 (350)
Q Consensus 184 ~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~-~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY 262 (350)
.++..|++++.++. +++++.+|++.+++.+..++ .+++++ +++|| .++++|.++|+++|+++|+|++|
T Consensus 126 ~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~i~~~~---~~v~~~~~~g~~-------~~~~~i~~l~~~~~~~li~D~a~ 194 (437)
T 3bb8_A 126 PTIQNGLIPVFVDV-DIPTYNVNASLIEAAVSDKT---KAIMIAHTLGNL-------FDLAEVRRVADKYNLWLIEDCCD 194 (437)
T ss_dssp HHHHTTCEEEECCE-ETTTTEECGGGHHHHCCTTE---EEEEEECGGGCC-------CCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHHcCCEEEEEec-cCccCCcCHHHHHHhcCCCC---eEEEEeCCCCCh-------hcHHHHHHHHHHcCCEEEEECcc
Confidence 99999999999998 65567899999999886532 355554 56776 46788899999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCCh
Q 018820 263 QGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTA 314 (350)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~ 314 (350)
......+. . .+.... . +++.||+|..+++|.|.||++ ++++
T Consensus 195 ~~g~~~~~--~-----~~~~~~-d-~~~~s~~~~k~l~~g~gg~~~--~~~~ 235 (437)
T 3bb8_A 195 ALGSTYDG--K-----MAGTFG-D-IGTVSFYPAKHITMGEGGAVF--TQSA 235 (437)
T ss_dssp CTTCEETT--E-----ETTSSS-S-EEEEECSTTSSSCCSSCEEEE--ESCH
T ss_pred ccCceECC--e-----eccccc-C-EEEEECcCCcCCCCCCeEEEE--eCCH
Confidence 84332111 1 111111 2 677899999999999999877 7644
No 199
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.70 E-value=1.2e-16 Score=154.20 Aligned_cols=146 Identities=18% Similarity=0.203 Sum_probs=95.7
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC---hHHHHHHcCC--eEEEEEeecCCCCCCCHHHHHHHhhc-CCCCc
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN---HPKVFTLAGL--SVKSYRYYDPATRGLNFQGLLEDLGS-APAGA 221 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~---~~~~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~ 221 (350)
++||++++..+ +.+.+.+||+|++++|+|.. +.......|. +++.++. +++++.+|++.+++.+.. +++
T Consensus 100 ~~~Gs~a~~~a--l~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~i~~~~~~-- 174 (425)
T 3ecd_A 100 PHSGAQANGAV--MLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGV-SRDTMLIDYDQVEALAQQHKPS-- 174 (425)
T ss_dssp CSSHHHHHHHH--HHHHCCTTCEEEEECC------------------CEEEEECC-CTTTSSCCHHHHHHHHHHHCCS--
T ss_pred cCchHHHHHHH--HHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCC-CcccCccCHHHHHHHHhhcCCc--
Confidence 78888999774 44557899999999999987 3333334455 4555555 555688999999999863 443
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC-CCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc
Q 018820 222 IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY-QGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY 300 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 300 (350)
++++++|+||+. .++++|.++|++||+++|+||+| .++.+.+ ..... + .. .-+++.||||.+ +
T Consensus 175 -~v~~~~~~~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~--~~~~~---~-~~--~di~~~s~sK~l--~ 238 (425)
T 3ecd_A 175 -LIIAGFSAYPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAG--RHANP---V-EH--AHVVTSTTHKTL--R 238 (425)
T ss_dssp -EEEEECSCCCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTT--SSCCG---G-GT--CSEEEEESSGGG--C
T ss_pred -EEEEccccCCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhcc--cccCc---h-hc--CcEEEecCCccc--C
Confidence 667778999853 44689999999999999999994 3443332 11011 1 11 127899999987 7
Q ss_pred CcceeEEEEeeCChhH
Q 018820 301 GERVGALSIVCKTADV 316 (350)
Q Consensus 301 G~RvG~l~~v~~~~~~ 316 (350)
|+|+||++ +++++.
T Consensus 239 g~~~g~~~--~~~~~~ 252 (425)
T 3ecd_A 239 GPRGGFVL--TNDEEI 252 (425)
T ss_dssp CCSCEEEE--ESCHHH
T ss_pred CCCcEEEE--eCCHHH
Confidence 88999988 776533
No 200
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.70 E-value=1.2e-16 Score=156.95 Aligned_cols=204 Identities=11% Similarity=0.083 Sum_probs=127.0
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-hc-----------CCCEEEEcCCCCCChHHHH-
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-HY-----------HQRTIYIPQPTWGNHPKVF- 185 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-~~-----------~gd~Vlv~~P~y~~~~~~~- 185 (350)
..+|++.+++++ +. . ..++|++ ++||++|+..+..+... .. +||.|++.+|+|..+....
T Consensus 103 ~~~la~~la~~~-~~-~---~~~~v~~--~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~ 175 (449)
T 2cjg_A 103 MARFVETFARVL-GD-P---ALPHLFF--VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTL 175 (449)
T ss_dssp HHHHHHHHHHHH-CC-T---TCCEEEE--ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGG
T ss_pred HHHHHHHHHHhc-CC-C---CCCEEEE--eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchh
Confidence 456777777764 31 1 2678999 99999999886543221 11 2899999999998765432
Q ss_pred HHc--------CC-----eEEEEEeec--CCC------CCCCHHHHHHHhhcCCCCcEEEEecCCCCCCC-CCCCHHHHH
Q 018820 186 TLA--------GL-----SVKSYRYYD--PAT------RGLNFQGLLEDLGSAPAGAIVLLHACAHNPTG-VDPTLQQWE 243 (350)
Q Consensus 186 ~~~--------G~-----~~~~v~~~~--~~~------~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG-~~~s~~~~~ 243 (350)
... +. .++.+|+.+ .+. ...+++.+++.+++.+++.++++++..+|||| ..+++++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~ 255 (449)
T 2cjg_A 176 SLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFA 255 (449)
T ss_dssp GTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHH
T ss_pred hhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHH
Confidence 111 22 455555522 000 01345568888864333444655555568999 599999999
Q ss_pred HHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHH
Q 018820 244 RIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQ 323 (350)
Q Consensus 244 ~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~ 323 (350)
+|.++|++||+++|+||+|.+|...+ . ......+ .....++ +|||.+ |+||++ ++ +++.+.
T Consensus 256 ~l~~l~~~~g~lli~DEv~~g~g~~g--~-~~~~~~~-~~~~di~---t~sK~l-----~iG~~~--~~-----~~~~~~ 316 (449)
T 2cjg_A 256 AMRELCDEFDALLIFDEVQTGCGLTG--T-AWAYQQL-DVAPDIV---AFGKKT-----QVCGVM--AG-----RRVDEV 316 (449)
T ss_dssp HHHHHHHHTTCEEEEECTTTTTTTTS--S-SSTHHHH-TCCCSEE---EECGGG-----SSEEEE--EC-----GGGGGS
T ss_pred HHHHHHHHCCcEEEEeccccCCCccC--c-ceeeccc-CCCceEE---EecCcc-----cEEEEE--EC-----HHHhhh
Confidence 99999999999999999999986543 1 1122222 2223433 789987 899987 76 233332
Q ss_pred H-----HHhhcccccCCChhHHHHHHHHhc
Q 018820 324 V-----KLVIRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 324 l-----~~~~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+ .........+.+.+++.++...|+
T Consensus 317 l~~~~~~~~~~~~t~~~n~~~~~aa~aal~ 346 (449)
T 2cjg_A 317 ADNVFAVPSRLNSTWGGNLTDMVRARRILE 346 (449)
T ss_dssp TTCTTTSTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred hhhcccCCcccccCCCCCHHHHHHHHHHHH
Confidence 1 111222234566777777666553
No 201
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.70 E-value=1.7e-16 Score=155.70 Aligned_cols=142 Identities=19% Similarity=0.186 Sum_probs=102.5
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH---H--HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-CCCCc
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK---V--FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-APAGA 221 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~--~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~~ 221 (350)
++||++|+.. .+.+.+.+||+|++++|+|..|.. . +...+..++++++ +++++.+|++.+++.++. +++
T Consensus 113 ~~sGs~a~~~--a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~i~~~~~~-- 187 (447)
T 3h7f_A 113 PHSGAQANAA--VLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGV-DPATHLIDMDAVRATALEFRPK-- 187 (447)
T ss_dssp CSSHHHHHHH--HHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECC-CTTTCSCCHHHHHHHHHHHCCS--
T ss_pred eCCHHHHHHH--HHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCc-CcccCCcCHHHHHHHHHhcCCe--
Confidence 6778888877 445667899999999999987321 1 2223456667776 555678999999999864 344
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCcc
Q 018820 222 IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLY 300 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 300 (350)
++++++|+|||+. ++++|.++|+++|+++|+||+|. ++.+.+. . .. .+ . + .-|++.|+||.+ +
T Consensus 188 -~i~~~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~--~-~~--~~-~-~-~di~~~s~sK~l--~ 251 (447)
T 3h7f_A 188 -VIIAGWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGL--H-PS--PV-P-H-ADVVSTTVHKTL--G 251 (447)
T ss_dssp -EEEEECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS--S-CC--ST-T-T-CSEEEEESSGGG--C
T ss_pred -EEEEcCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCC--C-CC--CC-C-C-CcEEEecCCcCC--C
Confidence 7777899999986 67899999999999999999963 3433221 0 00 01 1 1 126799999987 4
Q ss_pred CcceeEEEEeeC
Q 018820 301 GERVGALSIVCK 312 (350)
Q Consensus 301 G~RvG~l~~v~~ 312 (350)
|+|.||++ ++
T Consensus 252 G~~gG~i~--~~ 261 (447)
T 3h7f_A 252 GGRSGLIV--GK 261 (447)
T ss_dssp CCSCEEEE--EC
T ss_pred CCCeEEEE--EC
Confidence 89999877 65
No 202
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.68 E-value=3.7e-16 Score=153.69 Aligned_cols=211 Identities=15% Similarity=0.095 Sum_probs=136.2
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCC--CCCCCCC-CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSR--VKEYLPI-VGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~--~~~Y~p~-~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
++.+.|..+.. . ..++.+.+.+.+.+......... ...|.+. .-..++++.+++++ |.+ +++|++ |+
T Consensus 66 ~~~iyld~~~~-g-~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~-----~~~v~~--t~ 135 (465)
T 3e9k_A 66 ENAIYFLGNSL-G-LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV-GAN-----EKEIAL--MN 135 (465)
T ss_dssp CBCEECBTTTS-C-CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH-TCC-----GGGEEE--CS
T ss_pred CCeEEecCCcc-C-CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc-CCC-----cCCEEE--EC
Confidence 46777776654 2 11122333455555444321111 1122222 22366888888874 543 578999 99
Q ss_pred CchhHHHHHHHHHHHhcCC---CEEEEcCCCCCChHH----HHHHcCCeEEE--EEee-cCCCCCCCHHHHHHHhhcCCC
Q 018820 150 SGTGSLRVGAEFLARHYHQ---RTIYIPQPTWGNHPK----VFTLAGLSVKS--YRYY-DPATRGLNFQGLLEDLGSAPA 219 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~g---d~Vlv~~P~y~~~~~----~~~~~G~~~~~--v~~~-~~~~~~~d~~~l~~~l~~~~~ 219 (350)
|+++++.++ +.++..+| ++|++++|+|+.... .++..|++++. +++. .++++.+|++.+++.+++..+
T Consensus 136 g~t~al~~~--~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~ 213 (465)
T 3e9k_A 136 ALTVNLHLL--MLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGD 213 (465)
T ss_dssp CHHHHHHHH--HHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGG
T ss_pred CHHHHHHHH--HHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCC
Confidence 999999884 34445554 559999999987444 56678988632 2221 223467899999999974323
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGL 299 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl 299 (350)
+..++++++||||||.+.+. ++|.++|+++|+++|+|+++..-... - .+... ..-+++.|++|.++.
T Consensus 214 ~~~lv~~~~~~n~tG~~~~l---~~i~~la~~~g~~vi~D~a~~~g~~~---~---~~~~~----~~D~~~~s~~K~l~~ 280 (465)
T 3e9k_A 214 SIAVILFSGVHFYTGQHFNI---PAITKAGQAKGCYVGFDLAHAVGNVE---L---YLHDW----GVDFACWCSYKYLNA 280 (465)
T ss_dssp GEEEEEEESBCTTTCBBCCH---HHHHHHHHHTTCEEEEECTTTTTTSC---C---CHHHH----TCCEEEECSSSTTCC
T ss_pred CeEEEEEeCcccCcceeecH---HHHHHHHHHcCCEEEEEhhhhcCCcC---C---chhhc----CCCEEEECccccccc
Confidence 45588999999999999984 67789999999999999998643321 1 11111 234778999999942
Q ss_pred cCcceeEEE
Q 018820 300 YGERVGALS 308 (350)
Q Consensus 300 ~G~RvG~l~ 308 (350)
...++|+++
T Consensus 281 gp~~~g~l~ 289 (465)
T 3e9k_A 281 GAGGIAGAF 289 (465)
T ss_dssp CTTCCCEEE
T ss_pred CCCceEEEE
Confidence 333899877
No 203
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.67 E-value=3.3e-16 Score=155.34 Aligned_cols=204 Identities=17% Similarity=0.159 Sum_probs=131.4
Q ss_pred CCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHH---HhCCCCCCccC--C
Q 018820 73 PVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKE------YLPIVGLAEFNKLSAKL---ILGADSPAIRE--N 141 (350)
Q Consensus 73 ~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~------Y~p~~G~~~lr~aia~~---~~g~~~~~~~~--~ 141 (350)
.+.|+|..|.+ +. .+.|.++......+ ..... |....+..++++++.++ ++|.+.. + .
T Consensus 44 ~~~i~L~a~e~------~~-~~~V~eA~~~~l~~-~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~---~~~~ 112 (483)
T 1rv3_A 44 RVGLELIASEN------FA-SRAVLEALGSCLNN-KYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQ---CWGV 112 (483)
T ss_dssp HSSEECCTTCC------CC-CHHHHHHHTSGGGT-CCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTT---TEEE
T ss_pred hcCeEEEcCCC------CC-CHHHHHHHHHHHhc-cCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcc---cCce
Confidence 46899987754 22 44555555444311 11112 33333456677555554 4565311 1 2
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH--------HHHcC--CeEEEEEeecCCCCCCCHHHHH
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV--------FTLAG--LSVKSYRYYDPATRGLNFQGLL 211 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~--------~~~~G--~~~~~v~~~~~~~~~~d~~~l~ 211 (350)
+|++ ++|+ +++.. .+.+++.|||+|++++|+|..+... ++..| ++++++++ +++++.+|++.++
T Consensus 113 ~V~~--~sGs-~an~~--~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~-~~~~~~iD~d~le 186 (483)
T 1rv3_A 113 NVQP--YSGS-PANFA--VYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV-NPDTGYIDYDRLE 186 (483)
T ss_dssp ECCC--SSHH-HHHHH--HHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB-CTTTCSBCHHHHH
T ss_pred EEEE--CCcH-HHHHH--HHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc-ccCCCcCCHHHHH
Confidence 3554 6666 67666 3556688999999999998887542 23344 44555544 5556889999999
Q ss_pred HHhh-cCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHHHHHhhcCCcEEE
Q 018820 212 EDLG-SAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSVRMFVADGGECFI 289 (350)
Q Consensus 212 ~~l~-~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~~~~~~~~~~vi~ 289 (350)
+.+. .+++ +|++ +++||| .+++ +++|.++|+++|+++++|++|. ++.+.+. ...++ . + .-++
T Consensus 187 ~~i~~~~tk---lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~--~~~p~----~-~-~div 250 (483)
T 1rv3_A 187 ENARLFHPK---LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGV--VPSPF----E-H-CHVV 250 (483)
T ss_dssp HHHHHHCCS---EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTS--SCCGG----G-T-CSEE
T ss_pred HHHhhcCCc---EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCC--CCCCC----C-C-CcEE
Confidence 9997 5554 6666 789999 7776 6788999999999999999975 4443321 11111 1 1 2377
Q ss_pred EeccccccCccCcceeEEEEeeCC
Q 018820 290 AQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 290 ~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
+.|++|++ .|+|.||++ +++
T Consensus 251 ~~s~~K~l--~GprgG~i~--~~~ 270 (483)
T 1rv3_A 251 TTTTHKTL--RGCRAGMIF--YRR 270 (483)
T ss_dssp EEESSGGG--CCCSCEEEE--EEC
T ss_pred EecCcccC--CCCCceEEE--Ecc
Confidence 89999986 699999988 664
No 204
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.66 E-value=8.5e-16 Score=151.14 Aligned_cols=175 Identities=13% Similarity=0.084 Sum_probs=120.1
Q ss_pred HHHHHHHHHhCCCCCCccCCcEEEEecCCchh-HHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeec-
Q 018820 122 FNKLSAKLILGADSPAIRENRVTTVQCLSGTG-SLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYD- 199 (350)
Q Consensus 122 lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~-al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~- 199 (350)
+|+.++++ +|.+ ++ +++ |+|+++ ++.++...+....+|+.|+++++.|+.+...++..|++++.+++..
T Consensus 138 ~~~~la~~-~g~~-----~~-~~~--t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~ 208 (456)
T 2z67_A 138 ILESFFKQ-LGLN-----VH-AIA--TPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLD 208 (456)
T ss_dssp HHHHHHHH-TTCC-----CE-EEE--ESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEE
T ss_pred HHHHHHHH-cCCC-----CC-EEE--eCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEecc
Confidence 44555544 4542 33 777 999995 4443211111112678899999999999999999999999988632
Q ss_pred CCCCCCCHHHHHHHh-hc--CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHH
Q 018820 200 PATRGLNFQGLLEDL-GS--APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQS 276 (350)
Q Consensus 200 ~~~~~~d~~~l~~~l-~~--~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~ 276 (350)
.+++.+|++.+++.+ +. ++ +.++++.++||||||.+.+ +++|.++|+++|+++++|+||..+..+- ....
T Consensus 209 ~~~~~~d~~~l~~~i~~~~~~~-~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~---~~~~ 281 (456)
T 2z67_A 209 GDRVYVPVEDIENAIKKEIELG-NRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYY---LEKL 281 (456)
T ss_dssp TTEEECCHHHHHHHHHHHHHTT-CCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHH---HHHH
T ss_pred CCCCCcCHHHHHHHHHHHhhCC-CeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHh---hHHH
Confidence 345789999999998 42 22 3557778899999999965 5677889999999999999998886531 0001
Q ss_pred HHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCChhHH
Q 018820 277 VRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKTADVA 317 (350)
Q Consensus 277 ~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~ 317 (350)
...+ ..+.. +++.|++|.++ .++|+||++ +.+++.+
T Consensus 282 ~~~~-~~~~D-~~~~s~hK~~~-~p~g~G~l~--~~~~~~~ 317 (456)
T 2z67_A 282 KKAF-KYRVD-AVVSSSDKNLL-TPIGGGLVY--STDAEFI 317 (456)
T ss_dssp HHHH-TSCCS-EEEEEHHHHHC-CCSSCEEEE--ESCHHHH
T ss_pred HHhh-CCCCC-EEEEcCCCCcC-CCCCeEEEE--EcCHHHH
Confidence 1111 11334 46788999765 679999988 7655433
No 205
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.66 E-value=7.5e-17 Score=153.00 Aligned_cols=168 Identities=14% Similarity=0.089 Sum_probs=109.7
Q ss_pred cE-EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh--HHHHHHcCCeEEEEEeecCCCC--CCCHHHHHHHhhc
Q 018820 142 RV-TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH--PKVFTLAGLSVKSYRYYDPATR--GLNFQGLLEDLGS 216 (350)
Q Consensus 142 ~v-~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~--~~d~~~l~~~l~~ 216 (350)
++ ++ |+|+++++.+ .+.+++.+||+|+++++.+..+ ...++..| +++.+++..++++ .+|.+.++ +.
T Consensus 69 ~~i~~--t~g~t~a~~~--~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~- 140 (362)
T 2c0r_A 69 KVLFI--QGGASTQFAM--IPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ- 140 (362)
T ss_dssp EEEEE--SSHHHHHHHH--HHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-
T ss_pred EEEEE--CCCchHHHHH--HHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC-
Confidence 54 55 8999999988 4456678999998887654333 35667789 9999998211223 34655543 33
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccc
Q 018820 217 APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKN 296 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 296 (350)
++..++++++|+||||.+++ ++++| +|+++|+|++|..+... -+ + ... -+++.|+||.
T Consensus 141 --~~t~~v~~~~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~~---~~------~-~~~--d~~~~s~~K~ 198 (362)
T 2c0r_A 141 --DNAAYLHLTSNETIEGAQFK--AFPDT------GSVPLIGDMSSDILSRP---FD------L-NQF--GLVYAGAQKN 198 (362)
T ss_dssp --TTEEEEEEESEETTTTEECS--SCCCC------TTSCEEEECTTTTTSSC---CC------G-GGC--SEEEEETTTT
T ss_pred --CCcCEEEEeCCcCccceecc--ccccc------CCCEEEEEChhhccCCc---cc------h-hHC--cEEEEecccc
Confidence 23457888999999999755 34444 89999999999866421 11 1 111 3677899999
Q ss_pred cCccCcceeEEEEeeCChhHHHHHHHHHHHh------------hcccccCCChhHHHHHHHHhc
Q 018820 297 LGLYGERVGALSIVCKTADVAGRVESQVKLV------------IRPMYSNPPIHGASIVAAILR 348 (350)
Q Consensus 297 ~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~------------~~~~~~~~~~~~q~i~~~~L~ 348 (350)
+|++| +||++ ++. ++++++... ......+++...+..+...|+
T Consensus 199 ~g~~G--~G~l~--~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~ 253 (362)
T 2c0r_A 199 LGPSG--VTVVI--VRE-----DLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLK 253 (362)
T ss_dssp TCCSS--CEEEE--EEG-----GGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHH
T ss_pred ccCcC--cEEEE--EcH-----HHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHH
Confidence 99888 99988 652 222222211 112335677777776665553
No 206
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.65 E-value=1.8e-16 Score=155.73 Aligned_cols=170 Identities=11% Similarity=0.029 Sum_probs=119.9
Q ss_pred CCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCe
Q 018820 112 EYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLS 191 (350)
Q Consensus 112 ~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~ 191 (350)
.|.+.....++++.+++ +|. .+++++ |+|+++++.++ +.+.+.+||.|+++.|+|..+...+...|++
T Consensus 52 ~~~~~~~~~~~~~~la~--~g~------~~~v~~--~~G~t~a~~~~--~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~ 119 (446)
T 2x3l_A 52 LHHPEEVILKSMKQVEK--HSD------YDGYFL--VNGTTSGILSV--IQSFSQKKGDILMARNVHKSVLHALDISQQE 119 (446)
T ss_dssp TTSCSSHHHHHHHHHCS--CTT------EEEEEE--SSHHHHHHHHH--HHTTTTSSSCEEECTTCCHHHHHHHHHHTCC
T ss_pred ccCcchHHHHHHHHHHh--cCC------CceEEE--eCCHHHHHHHH--HHHhcCCCCEEEEecCccHHHHHHHHHcCCe
Confidence 35566677889998888 554 256777 99999999884 4555789999999999999999999999999
Q ss_pred EEEEEeecCCC----CCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC-CC
Q 018820 192 VKSYRYYDPAT----RGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG-FA 266 (350)
Q Consensus 192 ~~~v~~~~~~~----~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~-~~ 266 (350)
++.++....++ +.+|++.+ +..++ .++++++ +||||.+.+ +++|+++|+++|+++|+||+|.. +.
T Consensus 120 ~~~v~~~~~~~~~~~~~~d~~~l---~~~~~---~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~ 189 (446)
T 2x3l_A 120 GHFIETHQSPLTNHYNKVNLSRL---NNDGH---KLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFG 189 (446)
T ss_dssp EEECEEEECTTTSSEEEEEC----------C---CEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTT
T ss_pred EEEEeCeeccccCcCCCCCHHHH---cCCCc---eEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhc
Confidence 99988722222 45777776 22222 2566666 667999998 56889999999999999999987 33
Q ss_pred CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 267 SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
+++ . .... ...+.. ++++|++|.++ .+.++||++ +++
T Consensus 190 f~~--~-~~~~---~~~g~D-i~~~S~~K~l~-~~~g~g~l~--~~~ 226 (446)
T 2x3l_A 190 LQG--F-PDST---LNYQAD-YVVQSFHKTLP-ALTMGSVLY--IHK 226 (446)
T ss_dssp STT--S-CCCG---GGGTCS-EEEECHHHHSS-SCTTCEEEE--EET
T ss_pred cCC--C-CCCh---HHcCCC-EEEECCccccc-cccccEEEE--EcC
Confidence 332 1 0111 112222 88999999654 445689988 654
No 207
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.64 E-value=1.1e-15 Score=151.27 Aligned_cols=209 Identities=11% Similarity=0.041 Sum_probs=143.8
Q ss_pred ccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCc----cCCcEEEEecCCchhHHHHHHHHH
Q 018820 90 PLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAI----RENRVTTVQCLSGTGSLRVGAEFL 162 (350)
Q Consensus 90 p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~----~~~~v~~~~t~G~~~al~l~~~l~ 162 (350)
+.+...+.+++.... ......|....+..++.+++++| ++|.+...+ ...++++ |.|+|+|+.++....
T Consensus 84 ~~~~~~~~~~~~~~~--n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~--t~ggTeA~~~al~~~ 159 (486)
T 1js3_A 84 SSYPAMLADMLCGAI--GCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVI--QGSASEATLVALLAA 159 (486)
T ss_dssp CCHHHHHHHHHHHHH--CCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEE--ESCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh--CcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEE--cCCcHHHHHHHHHHH
Confidence 334555666666655 22335576666788899888887 355532100 0245677 999999987743221
Q ss_pred HH--hc-----CC---------C-EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCC---CcE
Q 018820 163 AR--HY-----HQ---------R-TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPA---GAI 222 (350)
Q Consensus 163 ~~--~~-----~g---------d-~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~---~~~ 222 (350)
.. .. .| + .|++++++|..+...++..|++++.+|. + +++.+|++.|++.+.+.++ .++
T Consensus 160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~-d-~~~~~d~~~L~~~i~~~~~~g~~p~ 237 (486)
T 1js3_A 160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPS-D-GKFAMRASALQEALERDKAAGLIPF 237 (486)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECC-C-TTSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeec-C-CCCCCCHHHHHHHHHHHHhCCCCce
Confidence 11 11 03 2 4888999999999999999999999998 5 3578999999999975431 235
Q ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHH-HHHHhhcCCcEEEEeccccccCccC
Q 018820 223 VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQS-VRMFVADGGECFIAQSYAKNLGLYG 301 (350)
Q Consensus 223 ~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~-~~~~~~~~~~vi~~~S~SK~~gl~G 301 (350)
++++++|+||||.+ +++++|+++|++||+++++|++|.++.... .+... ...+ .+...+ +.+++|.++.|
T Consensus 238 ~vv~~~~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~--~~~~~~~~g~--~~adsi-~~~~hK~~~~p- 308 (486)
T 1js3_A 238 FVVATLGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFIC--PEFRHLLNGV--EFADSF-NFNPHKWLLVN- 308 (486)
T ss_dssp EEEEEBSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGS--TTTGGGGTTG--GGCSEE-EECHHHHSSCC-
T ss_pred EEEEeCCCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHC--HHHHHHhcCc--cccCee-EEchhhhcCCC-
Confidence 78889999999976 567888999999999999999998865321 11111 1111 122444 46789999865
Q ss_pred cceeEEEEeeCChh
Q 018820 302 ERVGALSIVCKTAD 315 (350)
Q Consensus 302 ~RvG~l~~v~~~~~ 315 (350)
+++||++ +.+++
T Consensus 309 ~~~G~l~--~~~~~ 320 (486)
T 1js3_A 309 FDCSAMW--VKRRT 320 (486)
T ss_dssp SSCEEEE--ESCHH
T ss_pred cceEEEE--EeCHH
Confidence 9999988 87764
No 208
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.63 E-value=1.1e-15 Score=147.31 Aligned_cols=147 Identities=14% Similarity=0.182 Sum_probs=96.5
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH---HHHHH--cCCeEEEEEeecCCCCCCCHHHHHHHh
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP---KVFTL--AGLSVKSYRYYDPATRGLNFQGLLEDL 214 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~---~~~~~--~G~~~~~v~~~~~~~~~~d~~~l~~~l 214 (350)
+++|++ ++| ++++.+ .+.+.+.+||+|++++|+|..+. ..... .+...+.++. + +++.+|++.+++.+
T Consensus 93 ~~~v~~--~sG-s~a~~~--a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~~~d~~~l~~~i 165 (420)
T 3gbx_A 93 YANVQP--HSG-SQANFA--VYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGI-D-ESGKIDYDEMAKLA 165 (420)
T ss_dssp EEECCC--SSH-HHHHHH--HHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEE-C-TTCSCCHHHHHHHH
T ss_pred CceeEe--cCc-HHHHHH--HHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccC-C-ccCCcCHHHHHHHH
Confidence 455654 555 788877 34556789999999999998743 22222 3345556665 4 45679999999999
Q ss_pred hcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC-CCCCCCCCchHHHHHHhhcCCcEEEEec
Q 018820 215 GSA-PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG-FASGSLDSDAQSVRMFVADGGECFIAQS 292 (350)
Q Consensus 215 ~~~-~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~-~~~~~~~~~~~~~~~~~~~~~~vi~~~S 292 (350)
++. ++ ++++++|+||+ ..+ +++|.++|++||+++|+||+|.. +...+ .. .. .+ . ...+++.|
T Consensus 166 ~~~~~~---~v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~--~~-~~--~~-~--~~di~~~s 229 (420)
T 3gbx_A 166 KEHKPK---MIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAG--VY-PN--PV-P--HAHVVTTT 229 (420)
T ss_dssp HHHCCS---EEEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTT--SS-CC--ST-T--TSSEEEEE
T ss_pred HhcCCe---EEEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecc--cC-Cc--cc-c--cCCEEEee
Confidence 763 33 67777899985 333 78899999999999999999753 32221 00 00 01 1 13488999
Q ss_pred cccccCccCcceeEEEEeeCC
Q 018820 293 YAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 293 ~SK~~gl~G~RvG~l~~v~~~ 313 (350)
|||.++ |.|.||++ +++
T Consensus 230 ~sK~~~--g~~gg~~~--~~~ 246 (420)
T 3gbx_A 230 THKTLA--GPRGGLIL--AKG 246 (420)
T ss_dssp SSGGGC--SCSCEEEE--ESS
T ss_pred cccCCC--CCCceEEE--EcC
Confidence 999885 67779877 764
No 209
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.62 E-value=1e-14 Score=145.65 Aligned_cols=204 Identities=11% Similarity=0.043 Sum_probs=145.3
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh----
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH---- 165 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~---- 165 (350)
...+.+++.... ......|....+..++.+++++| ++|.+.. .+.+++ |.||++|+..+.......
T Consensus 109 ~~~~~e~l~~~~--~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~---~~~~~~--t~ggt~a~~~al~~a~~~~~~~ 181 (511)
T 3vp6_A 109 IGLAGEWLTSTA--NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSK---DGDGIF--SPGGAISNMYSIMAARYKYFPE 181 (511)
T ss_dssp HHHHHHHHHHHH--CCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSS---SCEEEE--ESSHHHHHHHHHHHHHHHHCTH
T ss_pred HHHHHHHHHHHh--ccCCCCcccCchHHHHHHHHHHHHHHHhCCCCC---CCceEE--CCchHHHHHHHHHHHHHHhhhh
Confidence 444555555544 23345687778889999999888 4565422 457777 999999987643222111
Q ss_pred --------cCCCEEEEcCCCCCChHHHHHHcCC---eEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEecCCCC
Q 018820 166 --------YHQRTIYIPQPTWGNHPKVFTLAGL---SVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLHACAHN 231 (350)
Q Consensus 166 --------~~gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p~N 231 (350)
.+++.|+++.++|..+...++..|+ +++.+|. ++ ++.+|++.|++.+++. ...+.+++.+.|+|
T Consensus 182 ~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~-d~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~ 259 (511)
T 3vp6_A 182 VKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC-NE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTT 259 (511)
T ss_dssp HHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB-CT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCS
T ss_pred hhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeec-CC-CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCC
Confidence 1567899999999999999999998 8999988 54 4789999999998753 12256888899999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh--cCCcEEEEeccccccCccCcceeEEEE
Q 018820 232 PTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA--DGGECFIAQSYAKNLGLYGERVGALSI 309 (350)
Q Consensus 232 PTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~gl~G~RvG~l~~ 309 (350)
|||.+ +++++|+++|++||+++++|++|........ + .+.... .+.. +++.+++|.++.| ..+|+++
T Consensus 260 ~~G~v---d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~-~----~~~~~~g~~~aD-sv~~~~hK~l~~p-~g~g~l~- 328 (511)
T 3vp6_A 260 VYGAF---DPIQEIADICEKYNLWLHVDAAWGGGLLMSR-K----HRHKLNGIERAN-SVTWNPHKMMGVL-LQCSAIL- 328 (511)
T ss_dssp SSCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGCT-T----TGGGGTTGGGCS-EEEECTTSTTCCC-SCCEEEE-
T ss_pred CCccc---ccHHHHHHHHHHcCCEEEEEccchhhHhhCh-h----hhhhccCCccCC-EEEECcccccCCC-cCeEEEE-
Confidence 99998 4578889999999999999999987554211 1 111111 1123 3456999999855 8889887
Q ss_pred eeCChhHH
Q 018820 310 VCKTADVA 317 (350)
Q Consensus 310 v~~~~~~~ 317 (350)
+.+++.+
T Consensus 329 -~~~~~~~ 335 (511)
T 3vp6_A 329 -VKEKGIL 335 (511)
T ss_dssp -ESSTTHH
T ss_pred -EeCHHHH
Confidence 7766443
No 210
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.62 E-value=7.3e-15 Score=140.86 Aligned_cols=132 Identities=16% Similarity=0.185 Sum_probs=103.7
Q ss_pred CCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-------hcCCCEEEEcCCCCCChHHH
Q 018820 112 EYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-------HYHQRTIYIPQPTWGNHPKV 184 (350)
Q Consensus 112 ~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-------~~~gd~Vlv~~P~y~~~~~~ 184 (350)
.|.+..+..+||+++++++ |. + ++++ +.+|++|+.++ +.+. ..+||.|+++.|+|..+...
T Consensus 29 ~~~~~~~~~~l~~~la~~~-~~------~-~~i~--~~sGt~a~~~a--l~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~ 96 (390)
T 3b8x_A 29 MFTMGEYVKQYETQFAKTF-GS------K-YAVM--VSSGSTANLLM--IAALFFTKKPRLKKGDEIIVPAVSWSTTYYP 96 (390)
T ss_dssp CCSSCHHHHHHHHHHHHHH-TC------S-EEEE--ESCHHHHHHHH--HHHTTSSSSCSCCTTCEEEEESSSCHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHH-CC------C-cEEE--ECCHHHHHHHH--HHHHHhhhhcCCCCcCEEEECCCCcHHHHHH
Confidence 3667788999999999996 43 2 4455 77788898874 4444 56899999999999999999
Q ss_pred HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCC
Q 018820 185 FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQG 264 (350)
Q Consensus 185 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~ 264 (350)
++..|++++.++. +++++.+|++.+++.+++++ .++++++ ++|.. .++++|.++|+++|+++|+|++|..
T Consensus 97 ~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~~~~---~~v~~~~---~~g~~---~~~~~i~~l~~~~~~~li~D~a~~~ 166 (390)
T 3b8x_A 97 LQQYGLRVKFVDI-DINTLNIDIESLKEAVTDST---KAILTVN---LLGNP---NNFDEINKIIGGRDIILLEDNCESM 166 (390)
T ss_dssp HHHTTCEEEEECB-CTTTCSBCHHHHHHHCCTTE---EEEEEEC---GGGCC---CCHHHHHHHHTTSCCEEEEECTTCT
T ss_pred HHHcCCEEEEEec-CccccCcCHHHHHHHhCcCC---eEEEEEC---CccCh---hhHHHHHHHHHHcCCEEEEECcCcc
Confidence 9999999999998 66568899999999886532 3555532 34433 4678889999999999999999984
Q ss_pred C
Q 018820 265 F 265 (350)
Q Consensus 265 ~ 265 (350)
.
T Consensus 167 g 167 (390)
T 3b8x_A 167 G 167 (390)
T ss_dssp T
T ss_pred c
Confidence 3
No 211
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.61 E-value=1.3e-14 Score=144.37 Aligned_cols=203 Identities=11% Similarity=0.045 Sum_probs=138.4
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH------h
Q 018820 95 VVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR------H 165 (350)
Q Consensus 95 ~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~------~ 165 (350)
.+.+.+.... ......|....+..++.+.+.++ ++|.+.. .+++++ |.|+++|+.++...... .
T Consensus 108 ~~~~~l~~~~--n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~---~~~~~~--t~ggtea~~~al~~~~~~~~~~~~ 180 (504)
T 2okj_A 108 LAGEWLTSTA--NTNMFTYEIAPVFVLMEQITLKKMREIVGWSSK---DGDGIF--SPGGAISNMYSIMAARYKYFPEVK 180 (504)
T ss_dssp HHHHHHHHHH--CCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSS---SCEEEE--ESSHHHHHHHHHHHHHHHHCTTHH
T ss_pred HHHHHHHHhh--ccCCCchhhChHHHHHHHHHHHHHHHHhCCCCC---CCCEEE--eCCcHHHHHHHHHHHHHHHhhHHh
Confidence 3344555444 22223465555656667666555 3565321 467888 99999999875433211 0
Q ss_pred cCC-----C-EEEEcCCCCCChHHHHHHcCC---eEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEecCCCCCC
Q 018820 166 YHQ-----R-TIYIPQPTWGNHPKVFTLAGL---SVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLHACAHNPT 233 (350)
Q Consensus 166 ~~g-----d-~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p~NPT 233 (350)
.+| + .|+++.++|+.+...++..|. +++.+|. ++ ++.+|++.+++.+.+. ..+..+|++++|+|||
T Consensus 181 ~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~-~~-~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~t 258 (504)
T 2okj_A 181 TKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC-NE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVY 258 (504)
T ss_dssp HHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB-CT-TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSS
T ss_pred hcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEec-CC-CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCC
Confidence 145 6 799999999999999988877 8999998 54 5789999999998652 1235688889999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 234 GVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 234 G~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
|.+.+ +++|+++|+++|+++++|++|.++..... +....+..+ .+.. +++.|++|.++.| .++||++ +.+
T Consensus 259 G~i~~---l~~I~~la~~~g~~lhvD~a~~~~~~~~~-~~~~~~~g~--~~~D-~i~~~~hK~~~~p-~~~g~l~--~~~ 328 (504)
T 2okj_A 259 GAFDP---IQEIADICEKYNLWLHVDAAWGGGLLMSR-KHRHKLNGI--ERAN-SVTWNPHKMMGVL-LQCSAIL--VKE 328 (504)
T ss_dssp CCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTTG--GGCS-EEEECTTSTTCCC-SCCEEEE--ESS
T ss_pred CCcCC---HHHHHHHHHHcCCEEEEehhhhhHHHhCH-hhHhhcCCc--ccCC-EEEECchhhcCCC-cceEEEE--EEC
Confidence 98865 67889999999999999999998765321 100111101 1223 5567899998855 7999988 776
Q ss_pred hhH
Q 018820 314 ADV 316 (350)
Q Consensus 314 ~~~ 316 (350)
++.
T Consensus 329 ~~~ 331 (504)
T 2okj_A 329 KGI 331 (504)
T ss_dssp TTH
T ss_pred HHH
Confidence 543
No 212
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.60 E-value=1e-14 Score=145.36 Aligned_cols=202 Identities=13% Similarity=0.062 Sum_probs=136.6
Q ss_pred cccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcC
Q 018820 91 LVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH 167 (350)
Q Consensus 91 ~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~ 167 (350)
++.+.+.+++...... ....|....+..++.+.+.++ ++|.+..+ .+.+..+.|+|+++++.++. ++...+
T Consensus 67 ~~~~~v~~~l~~~~~~--~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~--~~~~~g~~t~ggtea~~~a~--~a~~~~ 140 (502)
T 3hbx_A 67 WMEPECDKLIMSSINK--NYVDMDEYPVTTELQNRCVNMIAHLFNAPLEE--AETAVGVGTVGSSEAIMLAG--LAFKRK 140 (502)
T ss_dssp CCCHHHHHHHHHTTTC--BTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCS--SCCCEEEEESSHHHHHHHHH--HHHHHH
T ss_pred CCCHHHHHHHHHHhcc--CCCChhcChhHHHHHHHHHHHHHHHhCCCccc--ccCCcceecCcHHHHHHHHH--HHHHHH
Confidence 3456666666654411 122233344456666665555 35554211 23334345899999998753 333332
Q ss_pred --------CC-----EEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCC
Q 018820 168 --------QR-----TIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTG 234 (350)
Q Consensus 168 --------gd-----~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG 234 (350)
|+ .|+++.++|..+...++..|++++.+|. +++++.+|++.+++.+.+. ..+|++++|+||||
T Consensus 141 ~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~~---t~~v~~~~~~n~tG 216 (502)
T 3hbx_A 141 WQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKL-SEGYYVMDPQQAVDMVDEN---TICVAAILGSTLNG 216 (502)
T ss_dssp HHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECC-BTTBCSCCHHHHHHHCCTT---EEEEEEEBSCTTTC
T ss_pred HhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEec-CCCcCcCCHHHHHHHHhhC---CEEEEEecCCCCCC
Confidence 65 8999999999999999999999999998 6655889999999998764 34788899999999
Q ss_pred CCCCHHHHHHHHHHHHhc------CcEEEEccCCCCCC----CCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce
Q 018820 235 VDPTLQQWERIRQLMRSK------GLLPFFDSAYQGFA----SGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 235 ~~~s~~~~~~i~~~~~~~------~~~ii~DeaY~~~~----~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
.+.+. ++|.++|+++ |+++++|++|.++. .+....+ + ....--++..|..|.+ +.+.++
T Consensus 217 ~~~~l---~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~------~-~~~~~D~v~~s~hK~l-~~p~g~ 285 (502)
T 3hbx_A 217 EFEDV---KLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD------F-RLPLVKSINVSGHKYG-LVYAGI 285 (502)
T ss_dssp CBCCH---HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS------T-TSTTEEEEEEETTTTT-CCCSSC
T ss_pred cccCH---HHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccc------c-CCCCceEEEECccccc-CCCCCe
Confidence 99764 5667888888 99999999998765 2211000 1 1111234556788865 488999
Q ss_pred eEEEEeeCChh
Q 018820 305 GALSIVCKTAD 315 (350)
Q Consensus 305 G~l~~v~~~~~ 315 (350)
||++ +.+++
T Consensus 286 G~~~--~~~~~ 294 (502)
T 3hbx_A 286 GWVI--WRNKE 294 (502)
T ss_dssp EEEE--ESSGG
T ss_pred EEEE--EeCHH
Confidence 9988 66554
No 213
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.59 E-value=1.8e-15 Score=145.18 Aligned_cols=168 Identities=17% Similarity=0.248 Sum_probs=110.0
Q ss_pred HHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH-H--HHHcC--CeEEEEEe
Q 018820 123 NKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK-V--FTLAG--LSVKSYRY 197 (350)
Q Consensus 123 r~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~-~--~~~~G--~~~~~v~~ 197 (350)
|+++++++ |.+ ++.|++ ++| ++++.++ +.+.+.+||.|++++|+|+.+.. . +...| .+++.+++
T Consensus 75 r~~la~~~-g~~-----~~~i~~--~sG-t~a~~~a--~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 143 (405)
T 2vi8_A 75 RERAKQLF-GAE-----HANVQP--HSG-AQANMAV--YFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGV 143 (405)
T ss_dssp HHHHHHHH-TCS-----EEECCC--SSH-HHHHHHH--HHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECB
T ss_pred HHHHHHHh-CCC-----ceEEEe--cCc-HHHHHHH--HHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccc
Confidence 35777764 542 333443 555 9999884 34457899999999999988753 1 12333 47777776
Q ss_pred ecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCC-CCCCCchH
Q 018820 198 YDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFAS-GSLDSDAQ 275 (350)
Q Consensus 198 ~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~-~~~~~~~~ 275 (350)
+++++.+|++.+++.+++ +++ ++++ +|+|+ |... ++++|.++|+++|+++|+||+|..... .+ ....
T Consensus 144 -~~~~~~~d~~~l~~~i~~~~~~---~v~~-~~~~~-~~~~---~l~~i~~l~~~~~~~li~Dea~~~g~~~~~--~~~~ 212 (405)
T 2vi8_A 144 -DPETHVIDYDDVREKARLHRPK---LIVA-AAAAY-PRII---DFAKFREIADEVGAYLMVDMAHIAGLVAAG--LHPN 212 (405)
T ss_dssp -CTTTCSBCHHHHHHHHHHHCCS---EEEE-CCSSC-CSCC---CHHHHHHHHHHHTCEEEEECTTTHHHHHTT--SSCC
T ss_pred -ccccCCcCHHHHHHHHHhcCCe---EEEE-eCCCC-CccC---CHHHHHHHHHHcCCEEEEEccccccccccC--cCCC
Confidence 545678999999999875 443 4444 45664 3333 378899999999999999999984222 11 1101
Q ss_pred HHHHHhhcCCcEEEEeccccccC-ccCcceeEEEEeeCChhHHHHHHHHHHHhh
Q 018820 276 SVRMFVADGGECFIAQSYAKNLG-LYGERVGALSIVCKTADVAGRVESQVKLVI 328 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~g-l~G~RvG~l~~v~~~~~~~~~~~~~l~~~~ 328 (350)
. + .. .. +++.||||.++ .+| ||++ ++ +++.+.+....
T Consensus 213 ~---~-~~-~d-i~~~s~sK~~~g~~g---G~~~--~~-----~~~~~~l~~~~ 250 (405)
T 2vi8_A 213 P---V-PY-AH-FVTTTTHKTLRGPRG---GMIL--CQ-----EQFAKQIDKAI 250 (405)
T ss_dssp S---T-TT-CS-EEEEESSSTTCCCSC---EEEE--EC-----HHHHHHHHHHH
T ss_pred c---c-cc-CC-EEEEeccccCCCCCC---eEEE--Ec-----HHHHHHHHhhh
Confidence 1 1 11 22 88999999997 666 9987 76 34555555443
No 214
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.35 E-value=1.9e-16 Score=156.19 Aligned_cols=238 Identities=15% Similarity=0.043 Sum_probs=141.0
Q ss_pred CCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCc
Q 018820 72 SPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSG 151 (350)
Q Consensus 72 ~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~ 151 (350)
+...|||..|.....-|. -...+++++.+++. ......| +..-..+|.+.++++.- . .+++.+ ++||
T Consensus 99 G~~yiD~~~~~~~~~lGh-~~p~V~~Av~~q~~--~~~~~~~-~~~~~~~Lae~L~~~~p--~-----~~~v~~--~nSG 165 (465)
T 2yky_A 99 GHAYVNFLGEYTAGLFGH-SHPVIRAAVERALA--VGLNLST-QTENEALFAEAVCDRFP--S-----IDLVRF--TNSG 165 (465)
Confidence 556889888765222221 11223333333333 1212234 34445667777777642 1 467888 9999
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH----HcCC--eEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEE
Q 018820 152 TGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT----LAGL--SVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLL 225 (350)
Q Consensus 152 ~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~ 225 (350)
++|+..+..+......++.|++.+++|..+..... ..|+ .++.+|+ .|++.+++.+++.+.+..+|+
T Consensus 166 seA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi 238 (465)
T 2yky_A 166 TEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAIL 238 (465)
Confidence 99998864432223345899999999977654322 2233 3333443 367888888864322333444
Q ss_pred ecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcce
Q 018820 226 HACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 226 ~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~Rv 304 (350)
+...+|+||. .++++.+++|.++|+++|+++|+||+|. |..+. ......+ ....-+.+|||.+| .|+|+
T Consensus 239 ~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~----~~a~~~~----gv~pDi~t~sK~lg-~G~pi 308 (465)
T 2yky_A 239 VEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSG----GGAQEML----GISADLTTLGKYIG-GGMSF 308 (465)
Confidence 4433566995 4568899999999999999999999999 75431 0111111 11222458999999 59999
Q ss_pred eEEEEeeCChhHHHHHHHHHHH------hhcccccCCChhHHHHHHHHh
Q 018820 305 GALSIVCKTADVAGRVESQVKL------VIRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 305 G~l~~v~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~q~i~~~~L 347 (350)
||++ ++ +++++.+.. .+..++ +.+.+++.++...|
T Consensus 309 G~v~--~~-----~~i~~~l~~~~~g~~~~~~T~-~~npla~aAa~aaL 349 (465)
T 2yky_A 309 GAFG--GR-----RDLMERFDPARDGAFAHAGTF-NNNILTMSAGHAAL 349 (465)
Confidence 9977 66 455555544 122233 45555665554433
No 215
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.56 E-value=1e-13 Score=138.39 Aligned_cols=200 Identities=15% Similarity=0.111 Sum_probs=135.7
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHH-----h
Q 018820 94 NVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLAR-----H 165 (350)
Q Consensus 94 ~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~-----~ 165 (350)
.++.+.+.... ......|....+..++.+.+.++ ++|.+ .+++++ |.|+++|+.++...... +
T Consensus 123 ~~~~~~l~~~~--n~~~~~~~~s~~~~~le~~~~~~la~l~g~~-----~~~~~~--t~ggtea~~~al~~ar~~~~~~~ 193 (515)
T 2jis_A 123 ALAGRIITESL--NTSQYTYEIAPVFVLMEEEVLRKLRALVGWS-----SGDGIF--CPGGSISNMYAVNLARYQRYPDC 193 (515)
T ss_dssp HHHHHHHHHHH--CCCTTCTTTCHHHHHHHHHHHHHHHHHHTCS-----SCEEEE--ESSHHHHHHHHHHHHHHHHCTTH
T ss_pred HHHHHHHHHHh--ccCCCchhhchHHHHHHHHHHHHHHHHhCCC-----CCCeEE--cCCcHHHHHHHHHHHHHHHhhHH
Confidence 33444444443 22223465555655555554444 24543 567888 99999998764332211 0
Q ss_pred c-CCC------EEEEcCCCCCChHHHHHHcCC---eEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEecCCCCC
Q 018820 166 Y-HQR------TIYIPQPTWGNHPKVFTLAGL---SVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLHACAHNP 232 (350)
Q Consensus 166 ~-~gd------~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p~NP 232 (350)
. +|+ +|+++.++|+.+...++..|. +++.+|. ++ ++.+|++.+++.+.+. ..+..+|++++|+||
T Consensus 194 ~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~-~~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~ 271 (515)
T 2jis_A 194 KQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKA-DE-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTV 271 (515)
T ss_dssp HHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB-CT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTT
T ss_pred hhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEec-CC-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 2 465 899999999999999998888 8999998 54 4789999999998752 223568888999999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 233 TGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 233 TG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
||.+.+ +++|+++|+++|+++++|++|.++..... +....+..+ .+ --+++.|++|.++. +.++|+++ +.
T Consensus 272 tG~i~~---l~~I~~la~~~g~~l~vD~a~~~~~~~~~-~~~~~~~g~--~~-aD~v~~s~hK~l~~-p~g~G~l~--~~ 341 (515)
T 2jis_A 272 LGAFDP---LEAIADVCQRHGLWLHVDAAWGGSVLLSQ-THRHLLDGI--QR-ADSVAWNPHKLLAA-GLQCSALL--LQ 341 (515)
T ss_dssp TCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTTG--GG-CSEEEECTTSTTCC-CSCCEEEE--ES
T ss_pred CCCccC---HHHHHHHHHHcCCeEEEehhhhhHHHhCh-hhHhhcCCC--cc-CCEEEECcccccCC-CCCeeEEE--Ee
Confidence 999876 67889999999999999999998765321 110111111 11 23677899999874 46899988 77
Q ss_pred Ch
Q 018820 313 TA 314 (350)
Q Consensus 313 ~~ 314 (350)
++
T Consensus 342 ~~ 343 (515)
T 2jis_A 342 DT 343 (515)
T ss_dssp CC
T ss_pred Ch
Confidence 65
No 216
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.56 E-value=4.7e-15 Score=142.68 Aligned_cols=154 Identities=12% Similarity=-0.009 Sum_probs=99.2
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC-hHHHHHHc--CCeEEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN-HPKVFTLA--GLSVKSY 195 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~-~~~~~~~~--G~~~~~v 195 (350)
..++|+.+++++ |.+ . +++|++ .|+|+++++.++ +.+++.+| .+.+..+.|.. ....+... |.+++.+
T Consensus 80 ~~~~~~~la~~~-g~~-~---~~~i~~-~t~g~t~al~~~--~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v 150 (398)
T 2fyf_A 80 VGRVRSGLAELF-SLP-D---GYEVIL-GNGGATAFWDAA--AFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIII 150 (398)
T ss_dssp HHHHHHHHHHHT-TCC-T---TCEEEE-EETCHHHHHHHH--HHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEE
T ss_pred HHHHHHHHHHHh-CCC-C---CceEEE-eCCchhHHHHHH--HHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEE
Confidence 467888888774 543 1 345542 389999999884 44556676 22332222211 12234555 8889888
Q ss_pred EeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 196 RYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 196 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
+. + +++..+.+ +..++ .++++++|+||||.+++.+++.++ +|+++|+|++|..+... .+
T Consensus 151 ~~-~-~g~~~~~~-----i~~~~---~~v~~~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~---~~-- 209 (398)
T 2fyf_A 151 TS-D-PGSAPEPQ-----TDPSV---DVIAWAHNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLP---VD-- 209 (398)
T ss_dssp EC-C-TTCCCCCC-----CCTTC---SEEEEESEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSC---CC--
T ss_pred ec-C-CCCCCCcc-----ccCCC---CEEEEeCcCCCcceecchHHhhhh------cCCeEEEEeccccCCcc---cC--
Confidence 87 4 33333321 33333 377778899999999998887665 89999999999876532 11
Q ss_pred HHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
. .. ..+++.|+||.+|.+| ++||++ ++
T Consensus 210 -~----~~--~di~~~s~sK~~~~~g-g~g~l~--~~ 236 (398)
T 2fyf_A 210 -I----AE--TDAYYFAPQKNFASDG-GLWLAI--MS 236 (398)
T ss_dssp -G----GG--CSEEEECTTSTTCSCS-SEEEEE--EC
T ss_pred -c----cc--CcEEEEecCcccCCCC-ceEEEE--EC
Confidence 1 11 2367899999999776 699977 65
No 217
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.56 E-value=2.3e-14 Score=142.35 Aligned_cols=200 Identities=13% Similarity=0.086 Sum_probs=135.5
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHH--Hh--
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLA--RH-- 165 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~--~~-- 165 (350)
..++.+...... +. ....|....+..++.+++.++ ++|.+ + .+++++ |+|+++|+.++..... .+
T Consensus 114 ~~v~~~~~~~~~-n~-~~~~~~~~~~~~~le~~~~~~la~~~g~~-~---~~~~~~--t~ggt~a~~~al~~ar~~~~~~ 185 (497)
T 2qma_A 114 PAVAAEAMIAAL-NQ-SMDSWDQASSATYVEQKVVNWLCDKYDLS-E---KADGIF--TSGGTQSNQMGLMLARDWIADK 185 (497)
T ss_dssp HHHHHHHHHHHH-CC-CTTCGGGCHHHHHHHHHHHHHHHHHTTCC-T---TCEEEE--ESSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-cc-cccchhhChHHHHHHHHHHHHHHHHhCCC-C---CCCeEE--cCCchHHHHHHHHHHHHHHHHh
Confidence 333444444444 22 234454444566766665555 34542 1 368888 9999999977543311 11
Q ss_pred -------cC------CC-EEEEcCCCCCChHHHHHHcCC---eEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEE
Q 018820 166 -------YH------QR-TIYIPQPTWGNHPKVFTLAGL---SVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLL 225 (350)
Q Consensus 166 -------~~------gd-~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~ 225 (350)
.+ |+ .|+++.++|..+...++..|. +++.+|. ++ ++.+|++.+++.+++. ..++.+++
T Consensus 186 ~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~-~~-~~~~d~~~L~~~i~~~~~~~~~~~~vv 263 (497)
T 2qma_A 186 LSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDA-NA-DGTMDITKLDEVIAQAKAEGLIPFAIV 263 (497)
T ss_dssp HHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB-CT-TSSBCGGGHHHHHHHHHHTTCEEEEEE
T ss_pred hcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEec-CC-CCcCCHHHHHHHHHHHHHCCCcceEEE
Confidence 12 46 899999999988888888876 7999998 54 4789999999998753 12244777
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHH-Hhh-cCCcEEEEeccccccCccCcc
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRM-FVA-DGGECFIAQSYAKNLGLYGER 303 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~-~~~-~~~~vi~~~S~SK~~gl~G~R 303 (350)
.+.++||||..-+ +++|+++|+++|+++++|++|.++.... + .+. +.. .... +++.|++|.++.| ++
T Consensus 264 ~~~~~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~---~---~~~~~~gi~~~D-~i~~s~hK~l~~p-~~ 332 (497)
T 2qma_A 264 GTAGTTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILS---S---HKSRLKGVERAH-SISVDFHKLFYQT-IS 332 (497)
T ss_dssp EEBSCTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGS---T---TGGGGTTGGGCS-EEEEETTTTTCCC-SS
T ss_pred EcCCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhC---c---chHhhcCcccCC-EEEEcchhccCCC-cc
Confidence 7889999998654 6788999999999999999999876532 1 111 111 1123 5577899998855 79
Q ss_pred eeEEEEeeCChh
Q 018820 304 VGALSIVCKTAD 315 (350)
Q Consensus 304 vG~l~~v~~~~~ 315 (350)
+||++ +.++.
T Consensus 333 ~G~l~--~~~~~ 342 (497)
T 2qma_A 333 CGALL--VNDKS 342 (497)
T ss_dssp CEEEE--ESCGG
T ss_pred eEEEE--EeCHH
Confidence 99988 77654
No 218
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.54 E-value=1.9e-13 Score=130.87 Aligned_cols=162 Identities=12% Similarity=0.104 Sum_probs=114.8
Q ss_pred HHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChH--HHHHHcCC--eEEEEE
Q 018820 121 EFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHP--KVFTLAGL--SVKSYR 196 (350)
Q Consensus 121 ~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~--~~~~~~G~--~~~~v~ 196 (350)
++++.++++ ++. ++.|++ |.|+++++..+. ..+.+||+|+++++.|..+. .+++..|. +++.++
T Consensus 39 ~~~~~l~~~-~~~------~~~v~~--~~sgt~a~~~~~---~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 106 (379)
T 3ke3_A 39 DLLSNLKTV-YNA------EAAVII--PGSGTYGMEAVA---RQLTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLT 106 (379)
T ss_dssp HHHHHHHHH-HTC------SEEEEE--ESCHHHHHHHHH---HHHCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEE
T ss_pred HHHHHHHHH-hCC------CCEEEE--cCChhHHHHHHH---HhCCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEe
Confidence 445555554 343 246777 999999998843 34579999999999886543 34555664 777777
Q ss_pred eecCC-------C-CCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCC
Q 018820 197 YYDPA-------T-RGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFAS 267 (350)
Q Consensus 197 ~~~~~-------~-~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~ 267 (350)
. +.+ . ..+|++.+++.++. +++ +++++.++||||...+.+++++|.++|+++|+++|+|+++.
T Consensus 107 ~-~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~---~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~---- 178 (379)
T 3ke3_A 107 A-ERTEDTEAPKPFAPVDIETAVAKIKEDKSA---IVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS---- 178 (379)
T ss_dssp C-EESSCCSSCCCEECCCHHHHHHHHHHHTCS---EEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC----
T ss_pred c-cccccccccCCCCCCCHHHHHHHHhhcCCc---EEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc----
Confidence 6 321 1 24899999999864 444 56677789999999999999999999999999999999975
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeC
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
+.. . ..+.. .+ --+++.|++|.++ .+.++|+++ +.
T Consensus 179 g~~--~-~~~~~---~~-~d~~~~s~~K~l~-~~~g~g~~~--~~ 213 (379)
T 3ke3_A 179 GCV--W-LDMKE---LG-IDVLISAPQKGWS-STPCAGLVM--LS 213 (379)
T ss_dssp TTC--C-CCHHH---HT-CSEEEECTTTTTC-SCCCEEEEE--EC
T ss_pred CCc--c-ccccc---cC-CCEEEecchhhcC-CCCceEEEE--EC
Confidence 211 1 11111 12 2366889999987 455789877 65
No 219
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.54 E-value=3.9e-14 Score=147.47 Aligned_cols=171 Identities=16% Similarity=0.172 Sum_probs=119.6
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEee
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 198 (350)
..++++.++++ +|. .+.+++ ++|+++++.. .+.+.+.+||.|+++.|+|..+...+...|++++.++.
T Consensus 207 v~~~ee~la~l-~G~------d~~i~~--~~Gtt~a~~~--~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~- 274 (755)
T 2vyc_A 207 FGESEKYAARV-FGA------DRSWSV--VVGTSGSNRT--IMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVP- 274 (755)
T ss_dssp HHHHHHHHHHH-HTC------SEEEEE--SSHHHHHHHH--HHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECC-
T ss_pred HHHHHHHHHHH-hCC------CceEEE--CCcHHHHHHH--HHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeC-
Confidence 35566666655 564 234666 8999999988 45667889999999999998888888899999999887
Q ss_pred cCCCCC----C-----CHHHHHHHhhcCCC-------CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC
Q 018820 199 DPATRG----L-----NFQGLLEDLGSAPA-------GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY 262 (350)
Q Consensus 199 ~~~~~~----~-----d~~~l~~~l~~~~~-------~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY 262 (350)
+.++++ + |++.+++.+++.+. ++.++++++| ||||.+.+ +++|+++|+++++++++|++|
T Consensus 275 ~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~ 350 (755)
T 2vyc_A 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAW 350 (755)
T ss_dssp CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTT
T ss_pred CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcC
Confidence 433333 4 99999999875322 1125666778 79999976 567899999999999999999
Q ss_pred CCCC-CCCCCCchHHHHHH--hh-cCCcEEEEeccccccCccCcceeEEE
Q 018820 263 QGFA-SGSLDSDAQSVRMF--VA-DGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 263 ~~~~-~~~~~~~~~~~~~~--~~-~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
..+. +++.-.+..+. .. .+ ...++|+++|++|. ++|.+.|.++
T Consensus 351 ~~~~~~~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i 397 (755)
T 2vyc_A 351 YGYARFNPIYADHYAM-RGEPGDHNGPTVFATHSTHKL--LNALSQASYI 397 (755)
T ss_dssp CTTGGGCGGGTTSSSS-CSCCCCCSSBEEEEEEETTTS--SSCCTTCEEE
T ss_pred chhcccCcccCCcchh-cCCcCCccCCCeEEEECcccc--ccCcCCeeee
Confidence 7542 22100000111 11 11 12378899999997 4788855444
No 220
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.54 E-value=3.3e-14 Score=147.15 Aligned_cols=173 Identities=10% Similarity=-0.030 Sum_probs=123.0
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcCCeEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAGLSVK 193 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G~~~~ 193 (350)
+..-..++++.+|++ +|. +..+++ ++|+++++.. .+.+.+.+||.|+++.|+|..+... ++..|++++
T Consensus 171 ~~~~i~e~e~~lA~~-~ga------e~~i~v--~nGtt~an~~--ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v 239 (730)
T 1c4k_A 171 HEGPAVAAEKHAARV-YNA------DKTYFV--LGGSSNANNT--VTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPV 239 (730)
T ss_dssp TBTHHHHHHHHHHHH-TTC------SEEEEE--SSHHHHHHHH--HHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEE
T ss_pred ChHHHHHHHHHHHHH-HCC------CcEEEE--CCHHHHHHHH--HHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEE
Confidence 334457889998887 454 234666 8998899987 4566788999999999999877777 788999999
Q ss_pred EEEeecCCCCC----CCHHHH-----HHHhhcC------CCCc-EEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 194 SYRYYDPATRG----LNFQGL-----LEDLGSA------PAGA-IVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 194 ~v~~~~~~~~~----~d~~~l-----~~~l~~~------~~~~-~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
.++. +.+.++ +|++.+ ++.+++. +.++ .++++++| ||||.+.+ +++|+++|++++++++
T Consensus 240 ~v~~-~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~li 314 (730)
T 1c4k_A 240 YLQT-NRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIE 314 (730)
T ss_dssp EECE-EECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEE
T ss_pred EEeC-CccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEE
Confidence 8876 333333 688888 8888654 2111 36677788 69999875 6788999999999999
Q ss_pred EccCCCCC-CCCCCCCchHHHHHH-----hhcCCcEEEEeccccccCccCcceeEEE
Q 018820 258 FDSAYQGF-ASGSLDSDAQSVRMF-----VADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 258 ~DeaY~~~-~~~~~~~~~~~~~~~-----~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+|++|... .+++ .......+ ..+..++++++|++|. ++|.+.|+++
T Consensus 315 vDeAh~~~~~f~~---~~~g~~~l~~~~~g~D~~~~iv~~S~hK~--L~g~~~gg~I 366 (730)
T 1c4k_A 315 FDSAWVGYEQFIP---MMRNSSPLLIDDLGPEDPGIIVVQSVHKQ--QAGFSQTSQI 366 (730)
T ss_dssp EECTTCCGGGSSG---GGGGGCTTSCCCCCTTSCEEEEEECHHHH--SSCCTTCEEE
T ss_pred EEcccccccccCc---ccCCcCcccccccCCCCCCEEEEECCCCC--CCCCCCEEEE
Confidence 99999753 3331 00000111 1122368999999997 4788876555
No 221
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.47 E-value=3.4e-13 Score=133.68 Aligned_cols=224 Identities=14% Similarity=0.151 Sum_probs=123.9
Q ss_pred CCCCCCCCccccchHhhccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC---CCCc---HHHH-
Q 018820 51 HVVRAPEDPILGVTVAYNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP---IVGL---AEFN- 123 (350)
Q Consensus 51 ~v~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p---~~G~---~~lr- 123 (350)
.+...++. ++.+.++.++.+ .+.|+|..+.. + +.+.|.+++.....+ .....|+. ..|. .+|.
T Consensus 34 ~l~~~d~~-~~~~~~~e~~rq-~~~i~lias~n------~-~~~~V~eA~~~~l~~-~y~~G~~g~r~~~G~~~~~~lE~ 103 (490)
T 2a7v_A 34 SLSDSDPE-MWELLQREKDRQ-CRGLELIASEN------F-CSRAALEALGSCLNN-KYSEGYPGKRYYGGAEVVDEIEL 103 (490)
T ss_dssp CHHHHCHH-HHHHHHHHHHHH-HHSEECCTTCC------C-CCHHHHHHHTSGGGT-CCCCC------------CTHHHH
T ss_pred hhhhcCHH-HHHHHHHHHHHH-HcCceEECCCC------C-CCHHHHHHHHHHHcC-CCccCCCcccccCccHHHHHHHH
Confidence 34444543 666654332211 26788887644 2 255666665543311 22122322 1233 3555
Q ss_pred ---HHHHHHHhCCCCCCccCCcE-EEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH--------HHHHcCCe
Q 018820 124 ---KLSAKLILGADSPAIRENRV-TTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK--------VFTLAGLS 191 (350)
Q Consensus 124 ---~aia~~~~g~~~~~~~~~~v-~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~G~~ 191 (350)
+.+++ ++|.+ .+++ +.+++.||++|+.. .+.+++.|||+|++++|.|..|.. .+...|..
T Consensus 104 ~a~~~~a~-l~g~~-----~~~~~~~v~~~sGt~An~~--al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~ 175 (490)
T 2a7v_A 104 LCQRRALE-AFDLD-----PAQWGVNVQPYSGSPANLA--VYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIF 175 (490)
T ss_dssp HHHHHHHH-HTTCC-----TTTEEEECCCSSHHHHHHH--HHHHHCCSCEECCC--------------------------
T ss_pred HHHHHHHH-HcCCC-----cccCceEEeCCchHHHHHH--HHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCe
Confidence 44444 46653 3333 33457788999887 566778999999999999876431 23345654
Q ss_pred EE--EEEeecCCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC-CCCCC
Q 018820 192 VK--SYRYYDPATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY-QGFAS 267 (350)
Q Consensus 192 ~~--~v~~~~~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY-~~~~~ 267 (350)
+. .+++ +++++.+|++.+++.++. +++ +++++.++||+. . ++++|.++|+++|+++++|+++ .++..
T Consensus 176 ~~~~~~~v-d~~~~~iD~d~le~~l~~~~~k---lIi~~~s~~~~~--~---dl~~i~~ia~~~g~~livD~Ah~~glv~ 246 (490)
T 2a7v_A 176 FESMPYKL-NPKTGLIDYNQLALTARLFRPR---LIIAGTSAYARL--I---DYARMREVCDEVKAHLLADMAHISGLVA 246 (490)
T ss_dssp -----CCB-CTTTCSBCHHHHHHHHHHHCCS---EEEECCSSCCSC--C---CHHHHHHHHHHTTCEEEEECGGGHHHHH
T ss_pred EEEEeccc-ccccCCcCHHHHHHHHhhcCCc---EEEEcCCCCCCc--c---cHHHHHHHHHHcCCEEEEcccccccccc
Confidence 44 4444 555678999999999864 343 777788999974 2 3788999999999999999995 34443
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
.+... .+ + . +. -+++.|++|++ .|.|.|+++ +++
T Consensus 247 ~g~~~--~~---~-~-~a-Div~~S~hK~l--~Gp~GG~i~--~~~ 280 (490)
T 2a7v_A 247 AKVIP--SP---F-K-HA-DIVTTTTHKTL--RGARSGLIF--YRK 280 (490)
T ss_dssp TTSSC--CG---G-G-TC-SEEEEESSGGG--CSCSCEEEE--EEC
T ss_pred CCcCC--CC---C-C-CC-CEEEECCcccC--ccccchhee--ecc
Confidence 32101 11 1 1 12 27789999987 578999987 664
No 222
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.47 E-value=1.7e-13 Score=133.70 Aligned_cols=156 Identities=15% Similarity=0.120 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH----HcCCeEEEE
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT----LAGLSVKSY 195 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v 195 (350)
.++++.++++ +|.+ ++++++ +.|++.+...+... ..+.+||+|++++|+|+.+...++ ..|++++.+
T Consensus 111 ~~~~~~la~~-~g~~-----~~~i~~--~~g~taa~ea~~~a-~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v 181 (438)
T 1wyu_A 111 FEYQTMIAEL-AGLE-----IANASM--YDGATALAEGVLLA-LRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL 181 (438)
T ss_dssp HHHHHHHHHH-HTSS-----EECSCB--SSHHHHHHHHHHHH-HHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHH-hCCC-----ccceEE--eCcHHHHHHHHHHH-HhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEE
Confidence 4566666666 4542 456777 99999444332111 135789999999999998876664 489999999
Q ss_pred EeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc---CCCCCCCCCCCC
Q 018820 196 RYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS---AYQGFASGSLDS 272 (350)
Q Consensus 196 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De---aY~~~~~~~~~~ 272 (350)
+. + ++.+|++. +.. +..++++++| ||||.+.+ +++|+++|+++|+++++|. +|..+.
T Consensus 182 ~~-~--~~~~d~~~----i~~---~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~~------ 241 (438)
T 1wyu_A 182 PL-E--GGRTPLPE----VGE---EVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVLK------ 241 (438)
T ss_dssp CC-B--TTBCCCCC----CCT---TEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTBC------
T ss_pred cC-c--CCccCHHH----hCC---CeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCcC------
Confidence 87 3 34677665 432 3457778889 99999984 6788999999999999652 232221
Q ss_pred chHHHHHHhhcCCcEEEE--eccccccCccCcceeEEEEeeC
Q 018820 273 DAQSVRMFVADGGECFIA--QSYAKNLGLYGERVGALSIVCK 312 (350)
Q Consensus 273 ~~~~~~~~~~~~~~vi~~--~S~SK~~gl~G~RvG~l~~v~~ 312 (350)
.+ . ..+..++++ +.|+|.+++.|.|+||++ ++
T Consensus 242 --~~-~---~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~--~~ 275 (438)
T 1wyu_A 242 --PP-G---AYGADIAVGDGQSLGLPMGFGGPHFGFLA--TK 275 (438)
T ss_dssp --CH-H---HHTCSEEEEECTTTTCCCGGGCSCCEEEE--EC
T ss_pred --CC-c---cCCCCEEEECCcccCCCccCCCCCeeEEE--Ec
Confidence 11 1 123345544 233444457788999987 65
No 223
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.43 E-value=3.1e-13 Score=139.13 Aligned_cols=170 Identities=13% Similarity=0.116 Sum_probs=118.9
Q ss_pred CCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEE
Q 018820 115 PIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKS 194 (350)
Q Consensus 115 p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~ 194 (350)
|..-+.++++.+|++ +|. +.-+++ ++|++.|+.. .+.+.+.+||.|+++.++|..+...+...|++++.
T Consensus 193 ~~g~i~eaE~~lA~~-fGa------~~a~~v--~nGts~An~~--ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~ 261 (715)
T 3n75_A 193 HSGPHKEAEQYIARV-FNA------DRSYMV--TNGTSTANKI--VGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIY 261 (715)
T ss_dssp TBTHHHHHHHHHHHH-HTC------SEEEEE--SSHHHHHHHH--HHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEE
T ss_pred CcHHHHHHHHHHHHH-hCC------CCceEE--CcHHHHHHHH--HHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEE
Confidence 444467888888887 464 234555 8888888866 55677899999999999999999999999999999
Q ss_pred EEeecCCCCCC---------CHHHHHHHhhcCCC--CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC
Q 018820 195 YRYYDPATRGL---------NFQGLLEDLGSAPA--GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263 (350)
Q Consensus 195 v~~~~~~~~~~---------d~~~l~~~l~~~~~--~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~ 263 (350)
++. +.+++++ |++.+++.+++.++ ++.++++++| ||+|.+++.+ +|+++|+++ .+++||||.
T Consensus 262 v~~-~~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~---~I~ela~~~--~livDEAH~ 334 (715)
T 3n75_A 262 FRP-TRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTD---FIKKTLDVK--SIHFDSAWV 334 (715)
T ss_dssp ECC-CBCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHH---HHHHHCCCS--EEEEECTTC
T ss_pred Eec-cccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHH---HHHHHhCcC--cEEEccccc
Confidence 886 3334543 89999999986432 2236677788 9999999765 456666655 378999998
Q ss_pred CCC-CCCCCCchHHHHHHhhcC---Cc-EEEEeccccccCccCcc-eeEEE
Q 018820 264 GFA-SGSLDSDAQSVRMFVADG---GE-CFIAQSYAKNLGLYGER-VGALS 308 (350)
Q Consensus 264 ~~~-~~~~~~~~~~~~~~~~~~---~~-vi~~~S~SK~~gl~G~R-vG~l~ 308 (350)
... +++ ..+....+ ..+ +. +++++|++|++ +|+. .||++
T Consensus 335 ~~~~f~~---~~~~~~al-~~g~~aD~vii~~~S~hKtL--~gltqgs~i~ 379 (715)
T 3n75_A 335 PYTNFSP---IYEGKCGM-SGGRVEGKVIYETQSTHKLL--AAFSQASMIH 379 (715)
T ss_dssp TTGGGSG---GGTTSSTT-SSSCCTTCEEEEEECHHHHS--SCCTTCEEEE
T ss_pred cccccCC---cccccccc-ccCcCCCEEEEEEecccccc--cCCCCeeEEE
Confidence 653 331 10001111 111 23 47799999995 6874 56666
No 224
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.43 E-value=1.1e-12 Score=129.86 Aligned_cols=205 Identities=10% Similarity=0.029 Sum_probs=142.0
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCCc-----cCCcEEEEecCCchhHHHHHHHHHHH
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPAI-----RENRVTTVQCLSGTGSLRVGAEFLAR 164 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~~-----~~~~v~~~~t~G~~~al~l~~~l~~~ 164 (350)
...+.+.+.... +.....|....+..++.+.+++| ++|.+.... .....++ |.||++++.++......
T Consensus 92 ~~~~~~~~~~~~--n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~--~~ggt~an~~al~~ar~ 167 (481)
T 4e1o_A 92 PSLLGDMLADAI--NCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVL--QSTVSESTLIALLAARK 167 (481)
T ss_dssp HHHHHHHHHHHH--CCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEE--ESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh--CcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEE--eCchHHHHHHHHHHHHH
Confidence 455666665555 22335687778899999999988 456532100 0124566 99999998775322211
Q ss_pred -----------------hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC---CCcEEE
Q 018820 165 -----------------HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP---AGAIVL 224 (350)
Q Consensus 165 -----------------~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~l 224 (350)
..+++.|+++.+++..+...++..|++++.+|. + +++.+|++.+++.+++.. ..++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~-~-~~~~~d~~~Le~~i~~~~~~g~~~~~v 245 (481)
T 4e1o_A 168 NKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPV-D-DNFSLRGEALQKAIEEDKQRGLVPVFV 245 (481)
T ss_dssp HHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECC-C-TTSCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEc-C-CCCcCCHHHHHHHHHHHHhCCCCcEEE
Confidence 025689999999999999888999999999998 5 357899999999987531 225577
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh--cCCcEEEEeccccccCccCc
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA--DGGECFIAQSYAKNLGLYGE 302 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~gl~G~ 302 (350)
+.+.++|+||.+ +++++|+++|++||+++++|.+|.....-. ...+.... ..... +..+++|.++.| .
T Consensus 246 v~~~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~~-----~~~~~~~~gi~~aDs-i~~~~hK~l~~p-~ 315 (481)
T 4e1o_A 246 CATLGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFLC-----PEFRGFLKGIEYADS-FTFNPSKWMMVH-F 315 (481)
T ss_dssp EEEBSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGGS-----GGGGGGGTTGGGCSE-EEECHHHHSSCC-S
T ss_pred EEecCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHhC-----hhhHHHhcCcccCCE-EEEChHHhcCCC-C
Confidence 888899999977 457788999999999999999998764321 11111111 01133 456899999855 6
Q ss_pred ceeEEEEeeCChh
Q 018820 303 RVGALSIVCKTAD 315 (350)
Q Consensus 303 RvG~l~~v~~~~~ 315 (350)
-+|+++ +.+++
T Consensus 316 g~g~l~--~~~~~ 326 (481)
T 4e1o_A 316 DCTGFW--VKDKY 326 (481)
T ss_dssp SCEEEE--ESBHH
T ss_pred ceEEEE--EeCHH
Confidence 778776 66653
No 225
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.38 E-value=1.8e-12 Score=127.95 Aligned_cols=192 Identities=10% Similarity=-0.004 Sum_probs=116.3
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVND-RSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCL 149 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~-~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~ 149 (350)
.+...|||..|.+-..-|. -...+++++.+.+... ......|.. ....+|++++++++..... ...++|.+ ++
T Consensus 61 dG~~ylD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f--~~ 134 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGY-SHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLIT--MA 134 (472)
T ss_dssp TSCEEEESSHHHHTCSSCB-TCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEE--ES
T ss_pred CCCEEEECCCCHhhcccCC-CCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEE--eC
Confidence 3567899998876333332 2233333333332100 000112322 3457899999886432211 12578999 99
Q ss_pred CchhHHHHHHHHHHHh------c-----------------CC---CEEEEcCCCCCChHHHH-HHcCCe--------E--
Q 018820 150 SGTGSLRVGAEFLARH------Y-----------------HQ---RTIYIPQPTWGNHPKVF-TLAGLS--------V-- 192 (350)
Q Consensus 150 G~~~al~l~~~l~~~~------~-----------------~g---d~Vlv~~P~y~~~~~~~-~~~G~~--------~-- 192 (350)
||++|+..+..+.... . +| +.|++.+++|..+.... ...|.. +
T Consensus 135 sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~ 214 (472)
T 1ohv_A 135 CGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFD 214 (472)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCC
T ss_pred CchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCC
Confidence 9999998865443211 0 45 89999999998876544 333321 1
Q ss_pred ---EEEEeec-C--CC--C-----CCCHHHHHHHhhcCC---CCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcE
Q 018820 193 ---KSYRYYD-P--AT--R-----GLNFQGLLEDLGSAP---AGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLL 255 (350)
Q Consensus 193 ---~~v~~~~-~--~~--~-----~~d~~~l~~~l~~~~---~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ 255 (350)
+++|.+. + .. + ..|++.+++.+++.. .+.++|++...+|+||. .++++.+++|.++|++||++
T Consensus 215 ~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~l 294 (472)
T 1ohv_A 215 WPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCA 294 (472)
T ss_dssp CCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCE
T ss_pred CcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCE
Confidence 1222110 0 00 0 125788888886521 13446666656888996 57899999999999999999
Q ss_pred EEEccCCCCCCCC
Q 018820 256 PFFDSAYQGFASG 268 (350)
Q Consensus 256 ii~DeaY~~~~~~ 268 (350)
+|+||+|.+|...
T Consensus 295 li~DEv~~g~g~~ 307 (472)
T 1ohv_A 295 FLVDEVQTGGGST 307 (472)
T ss_dssp EEEECTTTTTTTT
T ss_pred EEEeCcccCCCCC
Confidence 9999999987654
No 226
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.36 E-value=3.6e-12 Score=125.95 Aligned_cols=206 Identities=10% Similarity=-0.017 Sum_probs=140.4
Q ss_pred cHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH---HhCCCCCC----ccCCcEEEEecCCchhHHHHHHHHHHH-
Q 018820 93 LNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKL---ILGADSPA----IRENRVTTVQCLSGTGSLRVGAEFLAR- 164 (350)
Q Consensus 93 ~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~---~~g~~~~~----~~~~~v~~~~t~G~~~al~l~~~l~~~- 164 (350)
...+.+.+.... +.....|....+..+|.+.+++| ++|.+... -.....++ |.|||+++.++......
T Consensus 87 ~~~~~~~l~~~~--n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~--t~ggt~anl~al~~ar~~ 162 (475)
T 3k40_A 87 PAIVADMLSGAI--ACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVI--QGTASESTLVALLGAKAK 162 (475)
T ss_dssp HHHHHHHHHHHH--CCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEE--ESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh--CccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEE--cCchHHHHHHHHHHHHHH
Confidence 455566665555 22334577777889999999888 44543110 00124666 99999998664322110
Q ss_pred ----------------hcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC---CCcEEEE
Q 018820 165 ----------------HYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP---AGAIVLL 225 (350)
Q Consensus 165 ----------------~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~l~ 225 (350)
..++++|+++.+++..+...++..|++++.+|. +++ + +|++.+++.+++.. ..+++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~-d~~-~-~d~~~L~~~i~~~~~~~~~~~~v~ 239 (475)
T 3k40_A 163 KLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQS-ENH-R-MRGAALEKAIEQDVAEGLIPFYAV 239 (475)
T ss_dssp HHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECC-BTT-B-CCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEEC-CCC-C-cCHHHHHHHHHHHHHCCCccEEEE
Confidence 013478999999999999999999999999998 653 5 99999999987531 2255777
Q ss_pred ecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhc-CCcEEEEeccccccCccCcce
Q 018820 226 HACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVAD-GGECFIAQSYAKNLGLYGERV 304 (350)
Q Consensus 226 ~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~gl~G~Rv 304 (350)
.+.++|+||.+- .+++|+++|++||+++++|.+|....... . ..+..... ..--.+..+++|.++ ....+
T Consensus 240 ~~~~~t~~G~~~---~l~~I~~la~~~~~~lhvD~A~~~~~~~~--~---~~~~~~~gi~~~Ds~~~~~hK~l~-~p~g~ 310 (475)
T 3k40_A 240 VTLGTTNSCAFD---YLDECGPVGNKHNLWIHVDAAYAGSAFIC--P---EYRHLMKGIESADSFNFNPHKWML-VNFDC 310 (475)
T ss_dssp EEBSCTTTCCBC---CHHHHHHHHHHTTCEEEEECTTGGGGGGS--G---GGGGGGTTGGGCSEEEECHHHHSS-CCSSC
T ss_pred EEecCCCCcCcC---CHHHHHHHHHHhCCeEEEeHHhHHHHHhC--H---hhHHHhcCcccCCEEEECchhccC-CCCce
Confidence 888999999874 57788999999999999999998754321 1 11111110 011345688999887 45788
Q ss_pred eEEEEeeCChhH
Q 018820 305 GALSIVCKTADV 316 (350)
Q Consensus 305 G~l~~v~~~~~~ 316 (350)
|+++ +.+++.
T Consensus 311 g~l~--~~~~~~ 320 (475)
T 3k40_A 311 SAMW--LKDPSW 320 (475)
T ss_dssp EEEE--ESSGGG
T ss_pred EEEE--EeCHHH
Confidence 8877 776654
No 227
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.89 E-value=2.5e-08 Score=96.74 Aligned_cols=165 Identities=13% Similarity=0.056 Sum_probs=106.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcC---C-CEEEEcCCCCCChHHHHHHcCCeEEEEEe-ecCCCCCCCHHHHHHHhh
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYH---Q-RTIYIPQPTWGNHPKVFTLAGLSVKSYRY-YDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~---g-d~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~l~ 215 (350)
...++ ++|+|++... .+++.+.+ | |.|+++.-+.-.....+..+|++++.++. ++++..++|++.++++++
T Consensus 135 ~~~fl--VnGsTgg~la--milaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~ 210 (501)
T 3hl2_A 135 ANCFV--VPMATGMSLT--LCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQ 210 (501)
T ss_dssp CEEEE--ESSCHHHHHH--HHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHH
T ss_pred CcEEE--ECcHHHHHHH--HHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHH
Confidence 34666 8999977755 33344443 4 99999988877677777799999998854 455557899999999998
Q ss_pred cCCCCcE-EEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccc
Q 018820 216 SAPAGAI-VLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYA 294 (350)
Q Consensus 216 ~~~~~~~-~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 294 (350)
+.+...+ +++.+.++|-.|.+ +.+++|+++|++||+++++|+||.....- .. ..+......+.==++++|.-
T Consensus 211 e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~---~~-~lp~sA~~~GrAD~vVqS~H 283 (501)
T 3hl2_A 211 ELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSK---CM-HLIQQGARVGRIDAFVQSLD 283 (501)
T ss_dssp HHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHH---HH-HHHHHHHHHSCCCEEEEEHH
T ss_pred hcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhh---hh-hhHHHHHhcCCCcEEEeccc
Confidence 7642343 44444444532222 46788999999999999999999886521 00 11222223331224789999
Q ss_pred cccCccCcceeEEEEeeCChhHHHH
Q 018820 295 KNLGLYGERVGALSIVCKTADVAGR 319 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~~~~~ 319 (350)
|++-++ .. |+++ ...|++.+++
T Consensus 284 K~llvp-IG-G~ii-~~~d~e~l~~ 305 (501)
T 3hl2_A 284 KNFMVP-VG-GAII-AGFNDSFIQE 305 (501)
T ss_dssp HHHCCC-SS-CEEE-EESCHHHHHH
T ss_pred ccceee-cC-ceEE-EeCCHHHHHH
Confidence 997543 22 3332 2566544333
No 228
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.76 E-value=1.6e-07 Score=91.60 Aligned_cols=164 Identities=11% Similarity=0.022 Sum_probs=104.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhc----CCCEEEEcCCCCCChHHHHHHcCCeEEEEEe-ecCCCCCCCHHHHHHHhhc
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHY----HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRY-YDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~----~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~-~~~~~~~~d~~~l~~~l~~ 216 (350)
-.++ ++|+|++....+ ++.+. +++.|+++.-+.......+...|+.++.++. .+++...+|++.+++++++
T Consensus 118 ~~~l--V~GaT~~~~a~~--L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~ 193 (450)
T 3bc8_A 118 SCFV--VPMATGMSLTLC--FLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQE 193 (450)
T ss_dssp EEEE--ESSCHHHHHHHH--HHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHH
T ss_pred eEEE--ECCHHHHHHHHH--HHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHh
Confidence 3455 888885554432 23333 3789999877766667777889999888854 2344578999999999977
Q ss_pred CC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhh-cCCcEEEEeccc
Q 018820 217 AP-AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVA-DGGECFIAQSYA 294 (350)
Q Consensus 217 ~~-~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~-~~~~vi~~~S~S 294 (350)
.+ ..+.+|+.+..+|.+|.+ +.+++|+++|++||+++++|+||..+... ....++.... .+... ++.|.-
T Consensus 194 ~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~----~~~l~~~a~~~~~AD~-~v~S~H 265 (450)
T 3bc8_A 194 LGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSK----CMHLIQQGARVGRIDA-FVQSLD 265 (450)
T ss_dssp HCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHH----HHHHHHHHHHHSCCCE-EEEEHH
T ss_pred cCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhh----hHhHHHHHhcccCCCE-EEECCc
Confidence 54 233444444344444444 45788899999999999999999875421 0011212211 12233 568899
Q ss_pred cccCccCcceeEEEEeeCChhHHHHH
Q 018820 295 KNLGLYGERVGALSIVCKTADVAGRV 320 (350)
Q Consensus 295 K~~gl~G~RvG~l~~v~~~~~~~~~~ 320 (350)
|++. .-.-.+++. ..|++.+.++
T Consensus 266 K~l~-a~~~~~~l~--~rd~~~~~~~ 288 (450)
T 3bc8_A 266 KNFM-VPVGGAIIA--GFNEPFIQDI 288 (450)
T ss_dssp HHHS-CCSSCEEEE--ESCHHHHHHH
T ss_pred cCCC-chhccEEEE--ecCHHHHHHH
Confidence 9875 555666655 5666544433
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.75 E-value=2.4e-07 Score=90.67 Aligned_cols=218 Identities=11% Similarity=0.022 Sum_probs=129.6
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+..-||+..|.-...-|. -.+.+++++.+++. ..... ..+..-..+|-+.+++++-+ .+.|.+ +++
T Consensus 85 dG~~ylD~~~g~~~~~lGH-~hp~v~~Av~~q~~--~~~~~-~~~~~~~~~lae~l~~~~p~-------~~~v~f--~~S 151 (454)
T 4ao9_A 85 DGHRYADFIAEYTAGVYGH-SAPEIRDAVIEAMQ--GGINL-TGHNLLEGRLARLICERFPQ-------IEQLRF--TNS 151 (454)
T ss_dssp TCCEEEESSGGGGTTTTCS-CCHHHHHHHHHHHH--TCSCC-CSEESSHHHHHHHHHHHSTT-------CSEEEE--ESS
T ss_pred CCCEEEEccccHHhhcccC-CCHHHHHHHHHHHh--cCCCc-cCCcHHHHHHHHHHHHhCCC-------CCEEEE--eCc
Confidence 3556889876643122332 22344444444554 22211 12223345666667665321 468888 999
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH-H-----cCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEE
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT-L-----AGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVL 224 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~-~-----~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l 224 (350)
|++|...+..+.......++|+..+-+|......+. . .......+|+ -|.+.+++.+++.....++|
T Consensus 152 GsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAav 224 (454)
T 4ao9_A 152 GTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVV 224 (454)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEE
T ss_pred hHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEE
Confidence 999998876554334445788888888876432211 0 1112333333 37889999888765545555
Q ss_pred EecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEeccccccCccCcc
Q 018820 225 LHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYGER 303 (350)
Q Consensus 225 ~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~R 303 (350)
++-.-+.-.|.+ ++++-+++|.++|++||+++|+||+.-+ ..+. . .....+ .-...++ +|+|.+| .|+-
T Consensus 225 IvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~G~--~--~a~e~~-gv~PDi~---t~gK~lg-gG~P 294 (454)
T 4ao9_A 225 LVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RLAP--H--GLANKL-GIRSDLT---TLGKYIG-GGMS 294 (454)
T ss_dssp EECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GGST--T--CHHHHH-TCCCSEE---EEEGGGG-TTSS
T ss_pred EeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CCcc--c--cchhcc-CCCCcEE---EeccccC-CCCc
Confidence 554445556655 4688899999999999999999999865 2221 1 122222 1112333 5789998 8999
Q ss_pred eeEEEEeeCChhHHHHHHHHHH
Q 018820 304 VGALSIVCKTADVAGRVESQVK 325 (350)
Q Consensus 304 vG~l~~v~~~~~~~~~~~~~l~ 325 (350)
+|.+. +. +++.+.+.
T Consensus 295 iga~~--~~-----~ei~~~~~ 309 (454)
T 4ao9_A 295 FGAFG--GR-----ADVMALFD 309 (454)
T ss_dssp CEEEE--EC-----HHHHGGGC
T ss_pred ceeee--eH-----HHHHHHHh
Confidence 99866 66 55655443
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.45 E-value=5e-06 Score=81.45 Aligned_cols=252 Identities=13% Similarity=0.106 Sum_probs=131.2
Q ss_pred CCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCC
Q 018820 71 PSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLPIVGLAEFNKLSAKLILGADSPAIRENRVTTVQCLS 150 (350)
Q Consensus 71 ~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p~~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G 150 (350)
.+..-||+..|.--..-|. -...++++..+++..-......+.+.....+|-+.+++..-+. ..+++.+ +++
T Consensus 62 dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~-----~~~~v~f--~~s 133 (456)
T 4atq_A 62 DGNSFIDLGSGIAVTSVGA-SDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGD-----HAKRTVL--FNS 133 (456)
T ss_dssp TSCEEEESSHHHHTCTTCT-TCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCS-----SCEEEEE--ESS
T ss_pred CCCEEEEccccHHHHhcCC-CCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCC-----CCcEEEE--eCC
Confidence 3556789877732112221 1233343333334311111111223333344555555542111 1457888 899
Q ss_pred chhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH-HHHcC-------------CeEEEEEeec---CCC-CCCCHHHHHH
Q 018820 151 GTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV-FTLAG-------------LSVKSYRYYD---PAT-RGLNFQGLLE 212 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~-~~~~G-------------~~~~~v~~~~---~~~-~~~d~~~l~~ 212 (350)
|++|...+..+.......+.|+...-+|.+.... +...+ -.+..+|+.. ... ...+.+.+.+
T Consensus 134 GsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 213 (456)
T 4atq_A 134 GAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKR 213 (456)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHH
T ss_pred hHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHH
Confidence 9999988766644444557888888888765432 22211 1244444311 111 1122333333
Q ss_pred Hhh---c--CCCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-CCCCCCchHHHHHHhhcCC
Q 018820 213 DLG---S--APAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-SGSLDSDAQSVRMFVADGG 285 (350)
Q Consensus 213 ~l~---~--~~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~~~~~~~~~~~~~~~~~~~ 285 (350)
.++ . .+...+.+++-.-+.-.|. .++++-+++|.++|++||+++|+||+.-+|. .|. .+....+- -..
T Consensus 214 ~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~----~~a~e~~g-v~P 288 (456)
T 4atq_A 214 AITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE----WFAVDHEG-VVP 288 (456)
T ss_dssp HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS----SSGGGGTT-CCC
T ss_pred HHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc----cccccccC-CCC
Confidence 322 1 2223344444333334554 4668899999999999999999999999864 332 12222221 112
Q ss_pred cEEEEeccccccCccCcceeEEEEeeCChhHHHHHHHHHHHh-hcccccCCChhHHHHHHHHh
Q 018820 286 ECFIAQSYAKNLGLYGERVGALSIVCKTADVAGRVESQVKLV-IRPMYSNPPIHGASIVAAIL 347 (350)
Q Consensus 286 ~vi~~~S~SK~~gl~G~RvG~l~~v~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~i~~~~L 347 (350)
.++ .|+|.+| .|+-+|.++ +. +++.+.+... +..+|+ ..+++..++...|
T Consensus 289 Div---t~gK~lg-gg~P~~av~--~~-----~~i~~~~~~~~~~~Tf~-gnpla~aaala~L 339 (456)
T 4atq_A 289 DII---TMAKGIA-GGLPLSAIT--GR-----ADLLDAVHPGGLGGTYG-GNPVACAAALAAI 339 (456)
T ss_dssp SEE---EECGGGG-TTSSCEEEE--EE-----HHHHTTSCTTSSCCSSS-SCHHHHHHHHHHH
T ss_pred chh---hhhhccc-CcCCceeeE--ec-----HHHHhcccccCCCCCCC-CChHHHHhhHHHH
Confidence 343 4689998 899999876 65 4555444332 233343 3444444444433
No 231
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.27 E-value=2.9e-05 Score=81.45 Aligned_cols=103 Identities=16% Similarity=0.138 Sum_probs=67.0
Q ss_pred HHHHHHhhc-----CCCCcEEEEecCC-CCCCCCCC-CHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchHHHHHH
Q 018820 208 QGLLEDLGS-----APAGAIVLLHACA-HNPTGVDP-TLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQSVRMF 280 (350)
Q Consensus 208 ~~l~~~l~~-----~~~~~~~l~~~~p-~NPTG~~~-s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~~~~~~ 280 (350)
+.+++.+++ .+...+++++-.- ++-.|..+ +++.+++|.++|++||+++|+||++.+|...+ +. .....+
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG--~~-fa~e~~ 653 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLG--VE-TTTELL 653 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTS--BS-STHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCC--Cc-hhhHhc
Confidence 456666652 2333445544432 68888765 78889999999999999999999999985432 11 222222
Q ss_pred hhcCCcEEEEeccccccCccC-cceeEEEEeeCChhHHHHHHHHHH
Q 018820 281 VADGGECFIAQSYAKNLGLYG-ERVGALSIVCKTADVAGRVESQVK 325 (350)
Q Consensus 281 ~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~~~~~~~~~~~~l~ 325 (350)
.-...++ +|||.++ .| +++|+++ ++ +++.+.+.
T Consensus 654 -gv~PDii---tlsK~L~-gG~~Plgav~--~~-----~~i~~~~~ 687 (831)
T 4a0g_A 654 -GCKPDIA---CFAKLLT-GGMVPLAVTL--AT-----DAVFDSFS 687 (831)
T ss_dssp -SSCCSEE---EECGGGG-TTSSCCEEEE--EC-----HHHHHTTC
T ss_pred -CCCCcEE---EEecccc-cCccCcEEEE--EC-----HHHHHHHh
Confidence 1122343 6999998 57 8999987 77 56666554
No 232
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.88 E-value=0.0017 Score=63.64 Aligned_cols=160 Identities=18% Similarity=0.164 Sum_probs=92.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHh-----cCC-CEEEEcCCCCCChHH-HHHHcCC-----------eEEEEEe--e-
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARH-----YHQ-RTIYIPQPTWGNHPK-VFTLAGL-----------SVKSYRY--Y- 198 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~-----~~g-d~Vlv~~P~y~~~~~-~~~~~G~-----------~~~~v~~--~- 198 (350)
-++|.+ +++|++|...+..+.... .++ .+|+...-+|..... .+...|- ....++. +
T Consensus 128 ~~~v~f--~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~ 205 (473)
T 4e3q_A 128 SGRVFY--TNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYW 205 (473)
T ss_dssp SCEEEE--ESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHH
T ss_pred ccEEEE--eCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCccc
Confidence 468988 999999998876553221 233 567777888876432 2222221 1222222 0
Q ss_pred cCCCCCCC--------HHHHHHHhhcC-CCCcEEEEecCCCCCCCC-CCCHHHHHHHHHHHHhcCcEEEEccCCCCCC-C
Q 018820 199 DPATRGLN--------FQGLLEDLGSA-PAGAIVLLHACAHNPTGV-DPTLQQWERIRQLMRSKGLLPFFDSAYQGFA-S 267 (350)
Q Consensus 199 ~~~~~~~d--------~~~l~~~l~~~-~~~~~~l~~~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~-~ 267 (350)
.....+-. .+.+++.+... +...+++++-.-+.-.|+ .++++-|++|.++|++||+++|+||+.-+|. .
T Consensus 206 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRt 285 (473)
T 4e3q_A 206 RYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRT 285 (473)
T ss_dssp HHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTT
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcc
Confidence 00001111 23344444432 233445555444444565 4567899999999999999999999999984 3
Q ss_pred CCCCCchHHHHHHhhcCCcEEEEeccccccCccC-cceeEEEEeeC
Q 018820 268 GSLDSDAQSVRMFVADGGECFIAQSYAKNLGLYG-ERVGALSIVCK 312 (350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G-~RvG~l~~v~~ 312 (350)
+. .+....+. -...++ .++|.++ .| +=+|.++ +.
T Consensus 286 G~----~fa~e~~g-v~PDi~---t~~K~l~-gG~~Pl~av~--~~ 320 (473)
T 4e3q_A 286 GN----TWGCVTYD-FTPDAI---ISSKNLT-AGFFPMGAVI--LG 320 (473)
T ss_dssp SS----SCHHHHTT-CCCSEE---EECGGGG-TTSSCCEEEE--EC
T ss_pred cc----hhHHHhcC-CCCChH---Hhccccc-CCCCCccccc--cc
Confidence 32 12222221 112344 4689998 66 8999766 55
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=97.87 E-value=5.7e-05 Score=73.10 Aligned_cols=217 Identities=15% Similarity=0.141 Sum_probs=121.6
Q ss_pred cccchHh-hccCCCCCeEEeecccccCCCCCccccHHHHHHHHHHhhcCCCCCCCCC---CCCc--HHHHHHH----HHH
Q 018820 60 ILGVTVA-YNKDPSPVKLNLGVGAYRTEEGKPLVLNVVRKAEQQLVNDRSRVKEYLP---IVGL--AEFNKLS----AKL 129 (350)
Q Consensus 60 i~~~~~~-~~~~~~~~~i~l~~G~~~~~~~~p~~~~~v~~a~~~l~~~~~~~~~Y~p---~~G~--~~lr~ai----a~~ 129 (350)
|+.+.++ .++ ..+.|+|-..++. ..+.|.+++.....+ .....|+. ..|. -+-.|.+ |+.
T Consensus 42 i~~~i~~E~~R--Q~~~ieLIASEN~-------~S~aV~~a~gS~ltn-KYaEGyPg~RyYgGce~vD~iE~la~~rak~ 111 (490)
T 3ou5_A 42 MWELLQREKDR--QCRGLELIASENF-------CSRAALEALGSCLNN-KYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp HHHHHHHHHHH--HHHSEECCTTCCC-------CCHHHHHHHTSGGGT-CCCCC----------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHcCceEecCCCc-------CCHHHHHHhcCcccc-cccCCCCCccccCCChHHHHHHHHHHHHHHH
Confidence 5555443 222 2356888777662 267777777666522 22222321 1121 1222222 334
Q ss_pred HhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH--------HHHcCC--eEEEEEeec
Q 018820 130 ILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV--------FTLAGL--SVKSYRYYD 199 (350)
Q Consensus 130 ~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~--------~~~~G~--~~~~v~~~~ 199 (350)
+||.+.. +.-+=||..+|+.|... .+++++.|||+|+..+....+|..- ....|. +.++|++ +
T Consensus 112 lF~a~~A----~w~VNVQP~SGs~AN~a--vy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~v-d 184 (490)
T 3ou5_A 112 AFDLDPA----QWGVNVQPYSGSPANLA--VYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-N 184 (490)
T ss_dssp HTTCCTT----TEEEECCCSSHHHHHHH--HHHHHCC-CCCEECBC----------------------------CBCE-E
T ss_pred HhCCCcc----ccCCCCCcCCHHHHHHH--HHHHHcCCCCEEEecccCCCCcccccccCCCccccccccccccccccc-C
Confidence 7887532 22123678999999877 6788899999999999887777432 122232 4555666 7
Q ss_pred CCCCCCCHHHHHHHhhc-CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC-CCCCCCCCCchHHH
Q 018820 200 PATRGLNFQGLLEDLGS-APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ-GFASGSLDSDAQSV 277 (350)
Q Consensus 200 ~~~~~~d~~~l~~~l~~-~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~-~~~~~~~~~~~~~~ 277 (350)
+++..+|.|.+++..+. +|+ +|+..--.+|-= + +++++.++|.+-|.+++.|.+.. +|.-++.-. .++
T Consensus 185 ~~t~~IDyd~~~~~A~~~kPk---lIi~G~SaY~r~--i---d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~p--sP~ 254 (490)
T 3ou5_A 185 PKTGLIDYNQLALTARLFRPR---LIIAGTSAYARL--I---DYARMREVCDEVKAHLLADMAHISGLVAAKVIP--SPF 254 (490)
T ss_dssp TTTTEECHHHHHHHHHHHCCS---EEEECCSSCCSC--C---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC--CGG
T ss_pred CCCCcccHHHHHHHHhhcCCC---eEEECCccCccc--c---CHHHHHHHHhhcccEEEechhhhhhhhcccccC--Ccc
Confidence 77788999999988776 444 677655555552 3 35667777888999999999874 344333211 122
Q ss_pred HHHhhcCCcEEEEeccccccCccCcceeEEEEeeCC
Q 018820 278 RMFVADGGECFIAQSYAKNLGLYGERVGALSIVCKT 313 (350)
Q Consensus 278 ~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~~v~~~ 313 (350)
.. -. |+..|.-|++ .|=|-|.+. +.+
T Consensus 255 ~~-----AD-vVTtTTHKTL--rGPrGG~Il--~~~ 280 (490)
T 3ou5_A 255 KH-----AD-IVTTTTHKTL--RGARSGLIF--YRK 280 (490)
T ss_dssp GT-----CS-EEEEESSSTT--CSCSCEEEE--EEC
T ss_pred cc-----ce-EEeccccccc--cCCCceEEE--ecc
Confidence 11 12 5688889996 799999776 653
No 234
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=97.63 E-value=2e-05 Score=75.29 Aligned_cols=154 Identities=16% Similarity=0.031 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcC--CCEEEEcCCCCCCh--HHHHHHcCCeEEEE
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYH--QRTIYIPQPTWGNH--PKVFTLAGLSVKSY 195 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~--gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v 195 (350)
.+.|+.+++++ +... +++|++ .|.|+|+++.++ +..+..+ ||+|++..-+.... ...++..|..++.+
T Consensus 61 ~~ar~~la~ll-~~~~----~~evif-~t~~~T~a~n~a--~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~ 132 (377)
T 3e77_A 61 NNTENLVRELL-AVPD----NYKVIF-LQGGGCGQFSAV--PLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 132 (377)
T ss_dssp HHHHHHHHHHH-TCCT----TEEEEE-ESSHHHHHHHHH--HHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECS
T ss_pred HHHHHHHHHHh-CCCC----CCeEEE-EcCchHHHHHHH--HHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEe
Confidence 44566666664 4421 346665 247899999884 3445544 89887655433222 23455678777666
Q ss_pred EeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 196 RYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 196 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
+. +. +++.+++.++..+.+.++ ++.+++..|.||+..+. +|+++|+++++|.+-. +..-.+ |
T Consensus 133 ~~-~~-~~~~~~~~~~~~i~~~t~---lV~~~h~et~tG~~~pi--------i~~~~~~~~~vD~~q~-~g~~~i--d-- 194 (377)
T 3e77_A 133 PK-LG-SYTKIPDPSTWNLNPDAS---YVYYCANETVHGVEFDF--------IPDVKGAVLVCDMSSN-FLSKPV--D-- 194 (377)
T ss_dssp CC-CS-SSCSCCCGGGCCCCTTCS---CEEEESEETTTTEECSS--------CCCCTTCCEEEECTTT-TTSSCC--C--
T ss_pred cc-CC-CcCCCCChHHhccCCCcc---EEEEeCccCchheEchh--------hhccCCCEEEEEcccc-cCCCCC--c--
Confidence 65 32 345666666554444333 55566667778999885 3678899999997543 322111 1
Q ss_pred HHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+. +. .+ ++.|--|.+|-+| +|+++
T Consensus 195 -~~---~~--~~-~~~s~~K~~gp~G--~g~l~ 218 (377)
T 3e77_A 195 -VS---KF--GV-IFAGAQKNVGSAG--VTVVI 218 (377)
T ss_dssp -GG---GC--SE-EEEEGGGTTSCTT--CEEEE
T ss_pred -hh---hc--CE-EEEecccccCCCc--cEEEE
Confidence 11 11 23 6688899998666 56555
No 235
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=97.58 E-value=2.5e-05 Score=74.84 Aligned_cols=157 Identities=14% Similarity=-0.010 Sum_probs=95.0
Q ss_pred CCcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEc-CCCCCC-hHHHHHHcCCeEEE
Q 018820 117 VGLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIP-QPTWGN-HPKVFTLAGLSVKS 194 (350)
Q Consensus 117 ~G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~-~P~y~~-~~~~~~~~G~~~~~ 194 (350)
.-+.+.|+.+++++ +.. + +++|++ .|.|+|+++.++ +..++.+||+|++. .-.|.. ....++..| ++..
T Consensus 72 ~~~~~ar~~la~ll-~~~-~---~~evif-~t~~~T~a~n~a--i~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~ 142 (386)
T 3qm2_A 72 QVAEEAEQDFRDLL-NIP-S---NYKVLF-CHGGGRGQFAGV--PLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQI 142 (386)
T ss_dssp -CCHHHHHHHHHHH-TCC-T---TEEEEE-EESCTTHHHHHH--HHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEE
T ss_pred HHHHHHHHHHHHHh-CCC-C---CceEEE-EcCCchHHHHHH--HHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEE
Confidence 34678899999986 432 1 345665 247999999884 45557789987643 323321 122345678 8888
Q ss_pred EEeec--CCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCC-CCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCC
Q 018820 195 YRYYD--PATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD-PTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLD 271 (350)
Q Consensus 195 v~~~~--~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~ 271 (350)
++. + +++..++++.+++.+.+.++ +|.+++..|.||+. .+.+++ . +|+++++|-+- .+..-.+
T Consensus 143 v~~-~~~~~G~~~~~~~~~~~l~~~t~---lV~~~h~et~tG~~i~pi~~i---~-----~g~~~~vDa~q-s~g~~pi- 208 (386)
T 3qm2_A 143 IDA-KITVDGKRAVKPMREWQLSDNAA---YLHYCPNETIDGIAIDETPDF---G-----PEVVVTADFSS-TILSAPL- 208 (386)
T ss_dssp EEC-EEEETTEEEECCGGGCCCCTTCS---CEEECSEETTTTEECCCCCCC---C-----TTCCEEEECTT-TTTSSCC-
T ss_pred Eec-CcccCCCCCCchHHHhhcCCCCc---EEEEECCcCCcCEecCchhhh---c-----CCCEEEEEccc-ccCCCCC-
Confidence 887 4 33323677777666655444 56666666777996 554433 2 79999999753 3322111
Q ss_pred CchHHHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 272 SDAQSVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 272 ~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
| +. +. .+ .+.|--|.+|-+ .+|+++
T Consensus 209 -d---v~---~~--~~-~~~s~hK~lGP~--G~g~l~ 233 (386)
T 3qm2_A 209 -D---VS---RY--GV-IYAGAQKNIGPA--GLTLVI 233 (386)
T ss_dssp -C---GG---GC--SE-EEEETTTTTCCT--TEEEEE
T ss_pred -C---cc---cc--CE-EEEecccccCCC--ccEEEE
Confidence 1 11 11 24 558889999844 456655
No 236
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=97.45 E-value=0.00085 Score=63.53 Aligned_cols=151 Identities=13% Similarity=0.066 Sum_probs=87.6
Q ss_pred cHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEE-EEcCCCCCC-hHHHHHHcCCeEEEEE
Q 018820 119 LAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTI-YIPQPTWGN-HPKVFTLAGLSVKSYR 196 (350)
Q Consensus 119 ~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~V-lv~~P~y~~-~~~~~~~~G~~~~~v~ 196 (350)
+.+.|+.+++++ +.+. +++|++ .|.|+|+++.++ +..++ +||++ .+.+-.|.. ....++..|+++..++
T Consensus 52 ~~~~r~~la~ll-~~~~----~~~v~f-~t~~~T~a~n~~--~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~ 122 (361)
T 3m5u_A 52 HFGAQEKAKKLY-ELND----DYEVLF-LQGGASLQFAMI--PMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVA 122 (361)
T ss_dssp HHHHHHHHHHHH-TCCT----TEEEEE-ESSHHHHHHHHH--HHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHh-CCCC----CceEEE-EcCcHHHHHHHH--HHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEe
Confidence 345566666664 4421 334542 388999999884 44555 78765 233333432 1234467799999998
Q ss_pred eecCCC-CCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCCCCCCCCCchH
Q 018820 197 YYDPAT-RGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGFASGSLDSDAQ 275 (350)
Q Consensus 197 ~~~~~~-~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~~~~~~~~ 275 (350)
. +.++ +..+++. + +.+.++ ++.+++..|-||+..+. | ++ +|+++++|.+ +.+..-.+ |
T Consensus 123 ~-~~~g~~~~~~~~--~-l~~~t~---lv~~~~~e~~tG~~~~~-----i---~~-~~~~~~vD~~-q~~g~~~i--d-- 181 (361)
T 3m5u_A 123 S-SEESNFDHIPRV--E-FSDNAD---YAYICSNNTIYGTQYQN-----Y---PK-TKTPLIVDAS-SDFFSRKV--D-- 181 (361)
T ss_dssp E-CTTTTSCSCCCC--C-CCTTSS---EEEEESEETTTTEECSS-----C---CC-CSSCEEEECG-GGTTSSCC--C--
T ss_pred c-ccCcCCCcCChh--h-cCCCCC---EEEEeCCCCCcceeCCc-----c---cc-cCCEEEEEcc-cccCCCCC--C--
Confidence 8 5543 2245555 3 654443 56666667777998662 2 33 4999999974 33332211 1
Q ss_pred HHHHHhhcCCcEEEEeccccccCccCcceeEEE
Q 018820 276 SVRMFVADGGECFIAQSYAKNLGLYGERVGALS 308 (350)
Q Consensus 276 ~~~~~~~~~~~vi~~~S~SK~~gl~G~RvG~l~ 308 (350)
+.. .. +++.|--|.+|-+| +|+++
T Consensus 182 -~~~-----~d-~~~~s~~K~~gp~G--~g~l~ 205 (361)
T 3m5u_A 182 -FSN-----IA-LFYGGVQKNAGISG--LSCIF 205 (361)
T ss_dssp -CTT-----EE-EEEEETTTTSSCTT--CEEEE
T ss_pred -ccc-----CC-EEEEechhccCCCc--cEEEE
Confidence 111 12 56778999998554 56555
No 237
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=74.36 E-value=15 Score=28.40 Aligned_cols=100 Identities=10% Similarity=-0.010 Sum_probs=57.9
Q ss_pred cCCchhHHHHHHHHHHHhc---CCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHY---HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l 224 (350)
...+.+-+.+..-.++.+. .+..|+...|.+..|...+...|+....+-+....+..-.+..++++++...- .+|
T Consensus 10 ~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~--~aV 87 (119)
T 1ofu_X 10 SGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRS--HTV 87 (119)
T ss_dssp ESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCE--EEE
T ss_pred cCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCc--cEE
Confidence 3344444554444455544 45677777888888999999999864433332332211235667777776432 233
Q ss_pred EecCCCCCCCCCCCHHHHHHHHHHHHhcCcE
Q 018820 225 LHACAHNPTGVDPTLQQWERIRQLMRSKGLL 255 (350)
Q Consensus 225 ~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ 255 (350)
+. -.. .++..+.+++--.|++.+..
T Consensus 88 l~-wl~-----~l~~~~~RRLqlAA~~g~~~ 112 (119)
T 1ofu_X 88 VS-WLE-----PLSRAARKQLSRAAQLGQAQ 112 (119)
T ss_dssp EE-CCS-----SCCHHHHHHHHHHHHHHTCE
T ss_pred EE-CCC-----cCChHHHHHHHHHHHhCCCe
Confidence 32 222 26788888887777765544
No 238
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=71.61 E-value=33 Score=28.02 Aligned_cols=98 Identities=10% Similarity=0.015 Sum_probs=56.8
Q ss_pred chhHHHHHHHHHHHhc---CCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 151 GTGSLRVGAEFLARHY---HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 151 ~~~al~l~~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
+.+.+.+++-+++.+. .+..|+...|-+..|...+...|++...+-+....+..-.+..++++++...-. +|+.
T Consensus 55 g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~~~--aVl~- 131 (161)
T 1oft_A 55 PGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH--TVVS- 131 (161)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTTCEE--EEEE-
T ss_pred cHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhcCCcc--EEEE-
Confidence 3333444333444443 456677777778889999999998644433323332222367778888764332 2332
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCcEE
Q 018820 228 CAHNPTGVDPTLQQWERIRQLMRSKGLLP 256 (350)
Q Consensus 228 ~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 256 (350)
-.. .++.++.+++--.|++.+...
T Consensus 132 Wl~-----~l~~~~~RRLqlAAe~g~~~~ 155 (161)
T 1oft_A 132 WLE-----PLSRAARKQLSRAAQLGQAQS 155 (161)
T ss_dssp CCS-----SCCHHHHHHHHHHHHHTTCEE
T ss_pred CCC-----cCChHHHHHHHHHHHhCCCeE
Confidence 111 267888888877777655443
No 239
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=70.20 E-value=9.8 Score=33.93 Aligned_cols=101 Identities=11% Similarity=0.029 Sum_probs=58.1
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS--- 216 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~--- 216 (350)
.+.+++ ..|++.++-.+. ...+...|-.|++.+-.-.......+..|.+...+.. |- -|.+.+++.+++
T Consensus 28 ~gKval--VTGas~GIG~ai-A~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~-Dv----~~~~~v~~~~~~~~~ 99 (273)
T 4fgs_A 28 NAKIAV--ITGATSGIGLAA-AKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQA-DS----ANLAELDRLYEKVKA 99 (273)
T ss_dssp TTCEEE--EESCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEEC-CT----TCHHHHHHHHHHHHH
T ss_pred CCCEEE--EeCcCCHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEe-cC----CCHHHHHHHHHHHHH
Confidence 345666 566677773321 2234568888887654433344556667888877776 32 355555555443
Q ss_pred CCCCcEEEEecCCCCCCCC--CCCHHHHHHHHHH
Q 018820 217 APAGAIVLLHACAHNPTGV--DPTLQQWERIRQL 248 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~~ 248 (350)
+-.+.-++++|-..++.+- .++.++|+++.++
T Consensus 100 ~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp HHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCChhhccHHHHHHHHHH
Confidence 2122335554444444432 4689999998875
No 240
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=62.54 E-value=60 Score=27.70 Aligned_cols=98 Identities=13% Similarity=0.002 Sum_probs=44.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CC
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---AP 218 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~ 218 (350)
.+++ ..|+++++-... ...+...|-.|++.+-.-.......+..+.++..+.. |- -|.+.+.+.++. .-
T Consensus 8 k~~l--VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~~~~ 79 (257)
T 3tpc_A 8 RVFI--VTGASSGLGAAV-TRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNA-DV----TNEADATAALAFAKQEF 79 (257)
T ss_dssp CEEE--EESTTSHHHHHH-HHHHHHTTCEEEEEESSCC------------CEEEEC-CT----TCHHHHHHHHHHHHHHH
T ss_pred CEEE--EeCCCCHHHHHH-HHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEc-cC----CCHHHHHHHHHHHHHHc
Confidence 4444 556666663321 1233557877777654444444455555556666655 32 355666655542 11
Q ss_pred CCcEEEEecCCCCCCCC------CCCHHHHHHHHH
Q 018820 219 AGAIVLLHACAHNPTGV------DPTLQQWERIRQ 247 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~------~~s~~~~~~i~~ 247 (350)
.+.-+++++-...+.+. ..+.++|++..+
T Consensus 80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCccccccccCCHHHHHHHHH
Confidence 11225665544443332 356788877654
No 241
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=61.37 E-value=46 Score=28.39 Aligned_cols=99 Identities=10% Similarity=0.099 Sum_probs=52.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---C
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---A 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~ 217 (350)
+++++ ..|+++++-... ...+...|-.|++.+-.-..........|.++..+.. |- -|.+.+.+.++. .
T Consensus 6 gk~vl--VTGas~gIG~a~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~~~ 77 (247)
T 3rwb_A 6 GKTAL--VTGAAQGIGKAI-AARLAADGATVIVSDINAEGAKAAAASIGKKARAIAA-DI----SDPGSVKALFAEIQAL 77 (247)
T ss_dssp TCEEE--EETTTSHHHHHH-HHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCC-CT----TCHHHHHHHHHHHHHH
T ss_pred CCEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEc-CC----CCHHHHHHHHHHHHHH
Confidence 34444 556666663321 1233557877877654433344444555767766655 32 356666655543 1
Q ss_pred CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 218 PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+.+. ..+.++|++..+
T Consensus 78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 111225665554444433 457888877655
No 242
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=60.93 E-value=9.6 Score=37.26 Aligned_cols=61 Identities=16% Similarity=0.114 Sum_probs=38.2
Q ss_pred HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 187 LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 187 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
..++++..+.+.|..+|.+..+.+.+.-+.. ...|.|-.+|++|+++|++.|+++++-||=
T Consensus 173 ~~KlN~lh~HltDdq~wr~ei~~~P~Lt~~G-----------a~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 173 YNKLNVFHWHLVDDPSFPYESFTFPELMRKG-----------SYNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp HTTCCEEEEECCCSSCCCBCCSSCTHHHHHH-----------SSCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhCCceEEEEEecccCeeeeccccchhhhcc-----------ccCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 4556665555545555555543332221110 012446689999999999999999998884
No 243
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=60.20 E-value=17 Score=35.55 Aligned_cols=65 Identities=9% Similarity=-0.079 Sum_probs=39.9
Q ss_pred HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 187 LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 187 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
..++++..+.+.|..+|.+..+.+.+.-+..... ......|-.+|++|+++|++.|+++++-||-
T Consensus 185 ~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~~-------~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 185 RYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGST-------EVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp TTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSC-------CTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HcCCcEEEEEeccCCCceehhhhhHHHHhhcCcc-------ccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4555555555545555666555444432211110 0112336789999999999999999998884
No 244
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=56.72 E-value=82 Score=27.17 Aligned_cols=94 Identities=7% Similarity=-0.035 Sum_probs=50.0
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l 224 (350)
..|+++++-... ...+...|..|++..-.-..........+.++..+.. |- -|.+.+.+.++.. ..+.-++
T Consensus 10 VTGas~gIG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 10 VTGASSGFGRAI-AEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISL-DV----TDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp ETTTTSHHHHHH-HHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEEC-CT----TCHHHHHHHHHHHHHHHSCCSEE
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEe-eC----CCHHHHHHHHHHHHHhCCCCCEE
Confidence 566777773321 1233557877877655545556666666666766665 32 3566666555431 0111256
Q ss_pred EecCCCCCCCC--CCCHHHHHHHHH
Q 018820 225 LHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
+++-...+.+. ..+.++|++..+
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHH
Confidence 65544333322 456777765543
No 245
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=56.68 E-value=70 Score=27.86 Aligned_cols=99 Identities=15% Similarity=0.115 Sum_probs=51.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA--- 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--- 217 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-.......+..|.++..+.. |- -|.+.+++.++..
T Consensus 27 ~k~vl--VTGas~GIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 27 QRVCI--VTGGGSGIGRAT-AELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRV-DV----SSAKDAESMVEKTTAK 98 (277)
T ss_dssp TCEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEEC-CT----TCHHHHHHHHHHHHHH
T ss_pred CCEEE--EECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEe-cC----CCHHHHHHHHHHHHHH
Confidence 34555 556666663321 1233457877777654333334444555767777766 32 3566666555431
Q ss_pred CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 218 PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+.+ ...+.++|+++.+
T Consensus 99 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 99 WGRVDVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 01122566554433333 2467888886554
No 246
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=55.77 E-value=15 Score=35.93 Aligned_cols=60 Identities=10% Similarity=-0.004 Sum_probs=37.7
Q ss_pred HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 187 LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 187 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
..++++..+.+.|..+|.+..+.+.+.-+... ..| |-.+|++|+++|++.|+++++-||-
T Consensus 179 ~~KlN~lh~HltDdq~wr~e~~~~P~Lt~~Ga-----------~~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 179 FNKFNVLHWHIVDDQSFPYQSITFPELSNKGS-----------YSL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp HTTCCEEEEECCCSSCCCBCCSSCHHHHHHHS-----------SST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HhCCcEEEEeeccCccceeeccchhhhhcccC-----------cCC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 45666655555455556555443333221100 012 6689999999999999999988873
No 247
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=55.24 E-value=67 Score=28.68 Aligned_cols=26 Identities=4% Similarity=-0.083 Sum_probs=21.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQ 263 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~ 263 (350)
+.++.++|.+.|+++++.++-.++..
T Consensus 106 ~~~~~~~l~~~A~~~gi~viGPNc~G 131 (294)
T 2yv1_A 106 PVHDTMEFVNYAEDVGVKIIGPNTPG 131 (294)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSSCCE
T ss_pred CHHHHHHHHHHHHHcCCEEEcCCCce
Confidence 67788999999999999888777553
No 248
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=55.20 E-value=37 Score=28.50 Aligned_cols=94 Identities=10% Similarity=0.040 Sum_probs=49.5
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
..|+++++-... ...+...|..|++.+-.-.......+..+.++..+.. |- -|.+.+.+.++......-+++++
T Consensus 6 VTGas~gIG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~d~lv~~ 79 (230)
T 3guy_A 6 ITGASSGLGAEL-AKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRAR-DL----ASHQEVEQLFEQLDSIPSTVVHS 79 (230)
T ss_dssp EESTTSHHHHHH-HHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEEC-CT----TCHHHHHHHHHSCSSCCSEEEEC
T ss_pred EecCCchHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEee-cC----CCHHHHHHHHHHHhhcCCEEEEe
Confidence 445566663221 1223456766766554433334444455556666655 32 46777887776643221255554
Q ss_pred CCCCCCCC--CCCHHHHHHHHH
Q 018820 228 CAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 228 ~p~NPTG~--~~s~~~~~~i~~ 247 (350)
-...+.+. ..+.++|++..+
T Consensus 80 Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 80 AGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp CCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCcCCCCccccCCHHHHHHHHH
Confidence 44333333 457888877654
No 249
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=54.92 E-value=69 Score=27.72 Aligned_cols=99 Identities=12% Similarity=0.107 Sum_probs=50.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---C
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---A 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~ 217 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-.....+.+..|.++..+.. |- -|.+.+.+.++. .
T Consensus 27 gk~vl--VTGas~gIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~~~~ 98 (266)
T 3grp_A 27 GRKAL--VTGATGGIGEAI-ARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSA-NL----SDRKSIKQLAEVAERE 98 (266)
T ss_dssp TCEEE--ESSTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEEC-CT----TSHHHHHHHHHHHHHH
T ss_pred CCEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEe-ec----CCHHHHHHHHHHHHHH
Confidence 34444 566677773321 1233567877777654433344455566777777766 32 356666655542 1
Q ss_pred CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 218 PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+.+ ...+.++|++..+
T Consensus 99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp HTSCCEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 11122555544333322 2456777776544
No 250
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=54.80 E-value=65 Score=28.08 Aligned_cols=99 Identities=11% Similarity=0.083 Sum_probs=50.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA--- 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--- 217 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-.......+..|.++..+.. |- -|.+.+.+.++..
T Consensus 29 gk~vl--VTGas~gIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 29 GKVAI--VTGAGAGIGLAV-ARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRV-DV----SDEQQIIAMVDACVAA 100 (277)
T ss_dssp TCEEE--ETTTTSTHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEEC-CT----TCHHHHHHHHHHHHHH
T ss_pred CCEEE--EECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEe-cC----CCHHHHHHHHHHHHHH
Confidence 34454 556666662221 1233457877777654333334444555667766666 32 3566665554421
Q ss_pred CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 218 PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+.+. ..+.++|+++.+
T Consensus 101 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 101 FGGVDKLVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp HSSCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 111225565543333322 467888887644
No 251
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=54.38 E-value=1.1e+02 Score=27.33 Aligned_cols=48 Identities=15% Similarity=0.136 Sum_probs=31.3
Q ss_pred HHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCC
Q 018820 207 FQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQ 263 (350)
Q Consensus 207 ~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~ 263 (350)
.+.++++++... +.+++++ +| ++.++.++|.+.|+++++.++-.++..
T Consensus 85 ~~~v~ea~~~Gi--~~vVi~t-----~G--~~~~~~~~l~~~A~~~gi~viGPNc~G 132 (297)
T 2yv2_A 85 PDAVYEAVDAGI--RLVVVIT-----EG--IPVHDTMRFVNYARQKGATIIGPNCPG 132 (297)
T ss_dssp HHHHHHHHHTTC--SEEEECC-----CC--CCHHHHHHHHHHHHHHTCEEECSSSCE
T ss_pred HHHHHHHHHCCC--CEEEEEC-----CC--CCHHHHHHHHHHHHHcCCEEEcCCCCe
Confidence 555666655432 2233332 24 367788999999999999888777553
No 252
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=54.02 E-value=32 Score=30.19 Aligned_cols=96 Identities=11% Similarity=0.008 Sum_probs=50.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCc
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGA 221 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 221 (350)
.+++ ..|+++++-... ...+...|..|++..-.-.......+..+.++..+.. | --|.+.+.+.+++.. +.
T Consensus 17 k~vl--VTGas~gIG~~~-a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D----l~d~~~v~~~~~~~~-~i 87 (291)
T 3rd5_A 17 RTVV--ITGANSGLGAVT-ARELARRGATVIMAVRDTRKGEAAARTMAGQVEVREL-D----LQDLSSVRRFADGVS-GA 87 (291)
T ss_dssp CEEE--EECCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEEC-C----TTCHHHHHHHHHTCC-CE
T ss_pred CEEE--EeCCCChHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEc-C----CCCHHHHHHHHHhcC-CC
Confidence 4444 456666663321 1233456777777643322334444455667777766 3 247888888877652 23
Q ss_pred EEEEecCCCCCCCCCCCHHHHHHHH
Q 018820 222 IVLLHACAHNPTGVDPTLQQWERIR 246 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~~s~~~~~~i~ 246 (350)
-+++++-.........+.++|++..
T Consensus 88 D~lv~nAg~~~~~~~~~~~~~~~~~ 112 (291)
T 3rd5_A 88 DVLINNAGIMAVPYALTVDGFESQI 112 (291)
T ss_dssp EEEEECCCCCSCCCCBCTTSCBHHH
T ss_pred CEEEECCcCCCCcccCCHHHHHHHH
Confidence 3555544333333445566655443
No 253
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=53.86 E-value=88 Score=27.20 Aligned_cols=101 Identities=11% Similarity=0.071 Sum_probs=53.7
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
.+++++ ..|++.++-.+. ...+...|-.|++.+-.-...... ++..|.++..+.. |- -|.+.+++.+++
T Consensus 6 ~gKval--VTGas~GIG~ai-A~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~-Dv----t~~~~v~~~~~~ 77 (254)
T 4fn4_A 6 KNKVVI--VTGAGSGIGRAI-AKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA-DV----SKKKDVEEFVRR 77 (254)
T ss_dssp TTCEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CT----TSHHHHHHHHHH
T ss_pred CCCEEE--EeCCCCHHHHHH-HHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEc-cC----CCHHHHHHHHHH
Confidence 345555 556666773321 123456787787755332222222 3456888888877 32 355666555443
Q ss_pred ---CCCCcEEEEecCC-CCCCC--CCCCHHHHHHHHHH
Q 018820 217 ---APAGAIVLLHACA-HNPTG--VDPTLQQWERIRQL 248 (350)
Q Consensus 217 ---~~~~~~~l~~~~p-~NPTG--~~~s~~~~~~i~~~ 248 (350)
+-.+.-++++|-. ..+.+ ..++.++|+++.++
T Consensus 78 ~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 78 TFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 1111224444333 23444 35789999887763
No 254
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=51.84 E-value=75 Score=28.54 Aligned_cols=111 Identities=11% Similarity=0.062 Sum_probs=57.3
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCC-CEEEEcCCCC-----------CChHHHHHHcCCeEEEEEeecCCCCCCCH
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQ-RTIYIPQPTW-----------GNHPKVFTLAGLSVKSYRYYDPATRGLNF 207 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~g-d~Vlv~~P~y-----------~~~~~~~~~~G~~~~~v~~~~~~~~~~d~ 207 (350)
++.++++|..++..+-..+..+.. .| +.|+-.+|.. .....+.+....++.-+-. .+ ..-.
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~---~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~v-P~---~~~~ 85 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALE---YGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYV-PP---PFAA 85 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH---HTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECC-CH---HHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHH---CCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEec-CH---HHHH
Confidence 677888666645544444322322 23 2344456653 3344444422333333222 11 1124
Q ss_pred HHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhc-CcEEEEccCCCCCC
Q 018820 208 QGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSK-GLLPFFDSAYQGFA 266 (350)
Q Consensus 208 ~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~-~~~ii~DeaY~~~~ 266 (350)
+.++++++...+ .+++++ + |. +.++.+++.+.|+++ |+.+|-+.+..-+.
T Consensus 86 ~~~~e~i~~Gi~--~iv~~t-~----G~--~~~~~~~l~~~a~~~~gi~liGPnc~Gii~ 136 (305)
T 2fp4_A 86 AAINEAIDAEVP--LVVCIT-E----GI--PQQDMVRVKHRLLRQGKTRLIGPNCPGVIN 136 (305)
T ss_dssp HHHHHHHHTTCS--EEEECC-C----CC--CHHHHHHHHHHHTTCSSCEEECSSSCEEEE
T ss_pred HHHHHHHHCCCC--EEEEEC-C----CC--ChHHHHHHHHHHHhcCCcEEEeCCCCeEec
Confidence 445555554332 234432 2 32 456677999999999 99998887754443
No 255
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=51.58 E-value=27 Score=34.19 Aligned_cols=66 Identities=9% Similarity=0.007 Sum_probs=41.8
Q ss_pred HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 186 TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 186 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
...++++..+.+.|..+|.+..+.+.+.-+..... .-..+.|-.+|++|+++|++.|+++++-||=
T Consensus 209 A~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~~-------~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 209 SQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSKG-------QVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSC-------CTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHcCCcEEEEEeccCCccccccccchhhhhccCcc-------ccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 35566666666656556666655554433221110 0012336689999999999999999998884
No 256
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=51.46 E-value=54 Score=28.65 Aligned_cols=100 Identities=7% Similarity=0.076 Sum_probs=54.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
.+++++ ..|++.++-.+. ...+...|-.|++.+-.-...... ++..|.++..+.. |- -|.+.+++.+++
T Consensus 8 ~gKval--VTGas~GIG~ai-a~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~-Dv----~~~~~v~~~~~~ 79 (255)
T 4g81_D 8 TGKTAL--VTGSARGLGFAY-AEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF-DV----TDELAIEAAFSK 79 (255)
T ss_dssp TTCEEE--ETTCSSHHHHHH-HHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCC-CT----TCHHHHHHHHHH
T ss_pred CCCEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEe-eC----CCHHHHHHHHHH
Confidence 345666 666777773321 223466888888865432222222 3456778877766 32 345555544433
Q ss_pred ---CCCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 217 ---APAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 217 ---~~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
+-.+.-++++|-..++.+- .++.++|+++.+
T Consensus 80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~ 115 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVID 115 (255)
T ss_dssp HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2222225555444444443 468999988766
No 257
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=51.33 E-value=1.2e+02 Score=26.12 Aligned_cols=99 Identities=11% Similarity=0.055 Sum_probs=53.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA--- 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--- 217 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-.......+..|.++..+.. |- -|.+.+.+.++..
T Consensus 11 ~k~vl--VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 11 NKVAI--ITGACGGIGLET-SRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVV-DL----TNEVSVRALIDFTIDT 82 (271)
T ss_dssp TCEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEEC-CT----TCHHHHHHHHHHHHHH
T ss_pred CCEEE--EECCCcHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEEC-CC----CCHHHHHHHHHHHHHH
Confidence 34444 556666663221 1233557877877666556666666666777766665 32 3566666555431
Q ss_pred CCCcEEEEecCCCC-C-CC--CCCCHHHHHHHHH
Q 018820 218 PAGAIVLLHACAHN-P-TG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ~~~~~~l~~~~p~N-P-TG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-... + .+ ...+.++|++..+
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 83 FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp HSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 11122555544333 2 11 1467888877554
No 258
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=50.38 E-value=92 Score=26.58 Aligned_cols=98 Identities=11% Similarity=0.063 Sum_probs=49.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CC
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---AP 218 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~ 218 (350)
++++ ..|+++++-... ...+...|..|++.+-.-..........+.++..+.. |- -|.+.+.+.+++ .-
T Consensus 9 k~vl--VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~ 80 (259)
T 4e6p_A 9 KSAL--ITGSARGIGRAF-AEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQM-DV----TRQDSIDAAIAATVEHA 80 (259)
T ss_dssp CEEE--EETCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-CT----TCHHHHHHHHHHHHHHS
T ss_pred CEEE--EECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEe-eC----CCHHHHHHHHHHHHHHc
Confidence 3444 456666663221 1233457877777654333334444455666666665 32 356666555442 11
Q ss_pred CCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 219 AGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
.+.-+++++-...+.+ ...+.++|++..+
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 1222566554433332 2457888876544
No 259
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=50.14 E-value=86 Score=27.85 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=15.4
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHH
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIR 246 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~ 246 (350)
.+++++ ++|.. ||+.++.+.+.+|+
T Consensus 127 lPiilY-n~P~~-tg~~l~~~~~~~La 151 (294)
T 2ehh_A 127 IPIIIY-NIPSR-TCVEISVDTMFKLA 151 (294)
T ss_dssp SCEEEE-ECHHH-HSCCCCHHHHHHHH
T ss_pred CCEEEE-eCCcc-cCcCCCHHHHHHHH
Confidence 344443 34442 88888888876665
No 260
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=48.47 E-value=14 Score=35.44 Aligned_cols=29 Identities=17% Similarity=0.205 Sum_probs=25.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
++|.|-.+|++|+++|++.|++++|-||=
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 45778899999999999999999988873
No 261
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=47.76 E-value=39 Score=30.83 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=32.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCCCCC
Q 018820 229 AHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAYQGF 265 (350)
Q Consensus 229 p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY~~~ 265 (350)
-.||.|-....+++.++++.|+++|+-|+.|--|.++
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~ 85 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDT 85 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 3788888899999999999999999999999877654
No 262
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=47.75 E-value=92 Score=26.55 Aligned_cols=97 Identities=10% Similarity=0.024 Sum_probs=50.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---HHcCCeEEEEEeecCCCCCCCHHHHHHHhhc--
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF---TLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-- 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 216 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-....... +..|.++..+.. |- -|.+.+.+.++.
T Consensus 8 k~vl--VTGas~GIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 8 ATVA--VIGAGDYIGAEI-AKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL-DA----RNEDEVTAFLNAAD 79 (252)
T ss_dssp CEEE--EECCSSHHHHHH-HHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEEC-CT----TCHHHHHHHHHHHH
T ss_pred CEEE--EECCCchHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEC-cC----CCHHHHHHHHHHHH
Confidence 4444 456666663321 1233456877777654433333333 344777777776 32 355555554432
Q ss_pred -CCCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 217 -APAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 217 -~~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
. .+.-+++++-...+.+. ..+.++|++..+
T Consensus 80 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 80 AH-APLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp HH-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hh-CCceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2 23335555444433332 467888877654
No 263
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.69 E-value=74 Score=27.50 Aligned_cols=99 Identities=11% Similarity=0.048 Sum_probs=51.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCC---------Ch------HHHHHHcCCeEEEEEeecCCCCCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWG---------NH------PKVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~---------~~------~~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-. .- ...++..|.++..+.. |- -
T Consensus 10 gk~vl--VTGas~gIG~~i-a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~ 81 (287)
T 3pxx_A 10 DKVVL--VTGGARGQGRSH-AVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEV-DV----R 81 (287)
T ss_dssp TCEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEEC-CT----T
T ss_pred CCEEE--EeCCCChHHHHH-HHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEc-cC----C
Confidence 34444 556666663321 1233557877776432200 01 1123345777777766 32 3
Q ss_pred CHHHHHHHhhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHH
Q 018820 206 NFQGLLEDLGSA---PAGAIVLLHACAHNPTGVDPTLQQWERIRQ 247 (350)
Q Consensus 206 d~~~l~~~l~~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~ 247 (350)
|.+.+.+.+++. -.+.-+++++-...+.+...+.++|++..+
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhh
Confidence 566665555431 111226666655555555578888887665
No 264
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=47.66 E-value=38 Score=35.25 Aligned_cols=118 Identities=11% Similarity=0.011 Sum_probs=64.2
Q ss_pred cCCcEEEEecCCchhHHHHHHHHHHHhcCCC-----E-EEEcCCCCC-------------C------hHHHHHHcCCeEE
Q 018820 139 RENRVTTVQCLSGTGSLRVGAEFLARHYHQR-----T-IYIPQPTWG-------------N------HPKVFTLAGLSVK 193 (350)
Q Consensus 139 ~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd-----~-Vlv~~P~y~-------------~------~~~~~~~~G~~~~ 193 (350)
.++.|.+ ...+..++++-+-.|+.++..++ . .+.-.|.|+ . +...+...++++.
T Consensus 267 ~~~~i~I-~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN~l 345 (858)
T 1c7s_A 267 GKKEAQV-IGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKF 345 (858)
T ss_dssp CSSCEEE-EESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred eCCeEEE-EEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCcEE
Confidence 3556665 23344555555444555554332 1 233456665 1 1223445677777
Q ss_pred EEEeecCCCCCCCHHHHHHHhhcCCCC------cEEEEecC-CCC--CCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 194 SYRYYDPATRGLNFQGLLEDLGSAPAG------AIVLLHAC-AHN--PTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 194 ~v~~~~~~~~~~d~~~l~~~l~~~~~~------~~~l~~~~-p~N--PTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
.+.+.|..+|.+....+.+.-+....+ .-.+ .+. .++ |.|-.+|++|+++|++.|++++|-||=
T Consensus 346 h~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~-~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 346 HFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCL-LPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp EEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSB-CCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEeccCccccccccCCchhhhccccccccccccccc-cccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 766666666777766555432210000 0000 000 011 446789999999999999999988773
No 265
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=47.22 E-value=36 Score=31.01 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=49.4
Q ss_pred HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC
Q 018820 183 KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY 262 (350)
Q Consensus 183 ~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY 262 (350)
...+..|.+. ++.++..-+.-.+.+.+.-..- ++-+ -.||.|-..+.+...++++.|+++|+-++.|--|
T Consensus 13 ~~~e~~g~~~-----~~~~G~~~~~~~ilk~~G~n~v--Rlri---~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hy 82 (334)
T 1fob_A 13 LLLEDEGYSY-----KNLNGQTQALETILADAGINSI--RQRV---WVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHL 82 (334)
T ss_dssp HHHHHTTCCC-----BCTTSCBCCHHHHHHHHTCCEE--EEEE---CSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHcCCEE-----ECCCCCCchHHHHHHHcCCCEE--EEEE---EECCCCCccCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3456677764 3555544454445444433222 2323 3778888899999999999999999999999877
Q ss_pred CCC
Q 018820 263 QGF 265 (350)
Q Consensus 263 ~~~ 265 (350)
.++
T Consensus 83 sd~ 85 (334)
T 1fob_A 83 SDT 85 (334)
T ss_dssp SSS
T ss_pred CCC
Confidence 654
No 266
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=46.97 E-value=1.3e+02 Score=26.73 Aligned_cols=36 Identities=11% Similarity=0.144 Sum_probs=19.6
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFD 259 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~D 259 (350)
.+++++ ++|. .||+.++.+.+.+|++- -.++.=|=|
T Consensus 127 lPiilY-n~P~-~tg~~l~~~~~~~La~~--~pnIvgiK~ 162 (292)
T 2vc6_A 127 IPIIVY-NIPG-RSAIEIHVETLARIFED--CPNVKGVXD 162 (292)
T ss_dssp SCEEEE-ECHH-HHSCCCCHHHHHHHHHH--CTTEEEEEE
T ss_pred CCEEEE-eCcc-ccCcCCCHHHHHHHHhh--CCCEEEEec
Confidence 344444 3333 38888888887666520 234544544
No 267
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=46.82 E-value=1.4e+02 Score=26.66 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=19.4
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEc
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFD 259 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~D 259 (350)
..+++++ ++|. .||+.++.+.+.+|++ +-.++.=|=|
T Consensus 138 ~lPiilY-n~P~-~tg~~l~~~~~~~La~--~~pnIvgiKd 174 (306)
T 1o5k_A 138 DLGIVVY-NVPG-RTGVNVLPETAARIAA--DLKNVVGIXE 174 (306)
T ss_dssp SSCEEEE-ECHH-HHSCCCCHHHHHHHHH--HCTTEEEEEE
T ss_pred CCCEEEE-eCcc-ccCcCCCHHHHHHHHH--hCCCEEEEeC
Confidence 3444444 3333 3788888877766652 2234544444
No 268
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=45.92 E-value=1.3e+02 Score=26.10 Aligned_cols=99 Identities=10% Similarity=0.072 Sum_probs=50.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA--- 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~--- 217 (350)
+++++ ..|+++++-... ...+...|..|++.+-.-.......+..+.++..+.. |- -|.+.+.+.++..
T Consensus 28 ~k~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~~~~ 99 (272)
T 4dyv_A 28 KKIAI--VTGAGSGVGRAV-AVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPT-DV----TDPDSVRALFTATVEK 99 (272)
T ss_dssp CCEEE--ETTTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEEC-CT----TSHHHHHHHHHHHHHH
T ss_pred CCEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEe-cC----CCHHHHHHHHHHHHHH
Confidence 45555 667777773321 1233557877777654333334445555666666665 32 3566666555431
Q ss_pred CCCcEEEEecCCCC-CCC--CCCCHHHHHHHHH
Q 018820 218 PAGAIVLLHACAHN-PTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ~~~~~~l~~~~p~N-PTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-... |.+ ...+.++|++..+
T Consensus 100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 11122555443332 212 2467888877554
No 269
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=45.85 E-value=1.3e+02 Score=25.53 Aligned_cols=99 Identities=9% Similarity=0.063 Sum_probs=48.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---C
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---A 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~ 217 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-.......+..+.+...+.. |- -|.+.+++.++. .
T Consensus 9 gk~~l--VTGas~gIG~a~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 9 GKVAL--VTGASRGIGKAI-AELLAERGAKVIGTATSESGAQAISDYLGDNGKGMAL-NV----TNPESIEAVLKAITDE 80 (248)
T ss_dssp TCEEE--ESSCSSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEEC-CT----TCHHHHHHHHHHHHHH
T ss_pred CCEEE--EeCCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEE-eC----CCHHHHHHHHHHHHHH
Confidence 34444 556666663321 1233567877776543322233333444445555555 32 356666655543 1
Q ss_pred CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 218 PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+.+ ...+.++|++..+
T Consensus 81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 81 FGGVDILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 11122566554433333 2357888887654
No 270
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=45.82 E-value=26 Score=34.69 Aligned_cols=59 Identities=7% Similarity=-0.084 Sum_probs=36.5
Q ss_pred HcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 187 LAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 187 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
..++++..+.+.|..+|.+..+...+.-+... -..|-.+|++|+++|++.|+++++-||
T Consensus 215 ~~KlN~lH~HltDdqgwrlei~~~P~Lt~~Ga------------~~~~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 215 AVKLNTFHWHITDSQSFPFVTTKRPNLYKFGA------------LSPQKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp HTTCCEEEEECCCSSCCCBCCSSSHHHHHHHS------------SSSSSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred HcCCceEEEEeecCcCceeccccCcchhccCC------------cCCCCCcCHHHHHHHHHHHHHhCCcee
Confidence 45555555555444456555444433221100 012568999999999999999998776
No 271
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=44.88 E-value=1.5e+02 Score=25.62 Aligned_cols=95 Identities=11% Similarity=0.045 Sum_probs=53.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAG 220 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~ 220 (350)
.++++ ..|++.++-.+. ...+...|-.|++.+-.-... -...+.++..+.. | --|.+.+++.+++..+-
T Consensus 11 GK~al--VTGas~GIG~ai-a~~la~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~-D----v~~~~~v~~~~~~~g~i 79 (242)
T 4b79_A 11 GQQVL--VTGGSSGIGAAI-AMQFAELGAEVVALGLDADGV---HAPRHPRIRREEL-D----ITDSQRLQRLFEALPRL 79 (242)
T ss_dssp TCEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESSTTST---TSCCCTTEEEEEC-C----TTCHHHHHHHHHHCSCC
T ss_pred CCEEE--EeCCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHH---hhhhcCCeEEEEe-c----CCCHHHHHHHHHhcCCC
Confidence 45555 556666773321 223456787777754332211 1234456666665 3 24677777777664432
Q ss_pred cEEEEecCCCCCCCCCCCHHHHHHHHH
Q 018820 221 AIVLLHACAHNPTGVDPTLQQWERIRQ 247 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~~~s~~~~~~i~~ 247 (350)
. ++++|-.-+.....++.++|+++.+
T Consensus 80 D-iLVNNAGi~~~~~~~~~~~w~~~~~ 105 (242)
T 4b79_A 80 D-VLVNNAGISRDREEYDLATFERVLR 105 (242)
T ss_dssp S-EEEECCCCCCGGGGGSHHHHHHHHH
T ss_pred C-EEEECCCCCCCcccCCHHHHHHHHH
Confidence 2 5554444444455678899988776
No 272
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=44.58 E-value=1.5e+02 Score=25.26 Aligned_cols=99 Identities=9% Similarity=0.005 Sum_probs=49.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS- 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~- 216 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.++.
T Consensus 12 ~k~vl--VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 12 DAVAI--VTGAAAGIGRAI-AGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC-NV----TDEQHREAVIKAA 83 (256)
T ss_dssp TCEEE--ECSCSSHHHHHH-HHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHH
T ss_pred CCEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEC-CC----CCHHHHHHHHHHH
Confidence 34555 566666763221 122345677777654332222222 2345777777766 32 356666555442
Q ss_pred --CCCCcEEEEecCCCCC-CCCCCCHHHHHHHHH
Q 018820 217 --APAGAIVLLHACAHNP-TGVDPTLQQWERIRQ 247 (350)
Q Consensus 217 --~~~~~~~l~~~~p~NP-TG~~~s~~~~~~i~~ 247 (350)
.-.+.-+++++-...+ .....+.++|++..+
T Consensus 84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 1111225555443332 223678888887654
No 273
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=44.33 E-value=14 Score=35.22 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=25.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 230 HNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 230 ~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
++|.|-.+|++|+++|++.|++++|-||=
T Consensus 82 ~~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 82 NDPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CCTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 34667899999999999999999988873
No 274
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=44.26 E-value=1.4e+02 Score=25.64 Aligned_cols=99 Identities=10% Similarity=0.108 Sum_probs=50.1
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---HHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF---TLAGLSVKSYRYYDPATRGLNFQGLLEDLGS- 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~- 216 (350)
+++++ ..|+++++-... ...+...|..|++.+-.-....... +..|.++..+.. |- -|.+.+.+.++.
T Consensus 26 gk~~l--VTGas~gIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 26 GRTAL--VTGSSRGLGRAM-AEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAF-DV----TSESEIIEAFARL 97 (271)
T ss_dssp TCEEE--ETTCSSHHHHHH-HHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCC-CT----TCHHHHHHHHHHH
T ss_pred CCEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEc-CC----CCHHHHHHHHHHH
Confidence 34555 566667773321 1233567888887654332222222 334666666655 32 356666655543
Q ss_pred --CCCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 217 --APAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 217 --~~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
.-.+.-+++++-...+.+. ..+.++|++..+
T Consensus 98 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 98 DEQGIDVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp HHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 1112225555443333332 357888877654
No 275
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=43.83 E-value=1.5e+02 Score=26.32 Aligned_cols=37 Identities=11% Similarity=0.166 Sum_probs=21.5
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
..+++++ ++|. .||+.++.+.+.+|++ -.++.=|=|.
T Consensus 138 ~lPiilY-n~P~-~tg~~l~~~~~~~La~---~pnIvgiKds 174 (301)
T 1xky_A 138 PLPVMLY-NVPG-RSIVQISVDTVVRLSE---IENIVAIKDA 174 (301)
T ss_dssp SSCEEEE-ECHH-HHSSCCCHHHHHHHHT---STTEEEEEEC
T ss_pred CCCEEEE-eCcc-ccCCCCCHHHHHHHHc---CCCEEEEEcC
Confidence 3454444 3333 3888888888877753 2455555453
No 276
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=43.78 E-value=1.2e+02 Score=27.44 Aligned_cols=37 Identities=8% Similarity=-0.048 Sum_probs=22.4
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
..+++++ ++|.. ||+.++.+.+.+|++ -.++.=|=|.
T Consensus 160 ~lPiilY-n~P~~-tg~~l~~e~~~~La~---~pnIvgiKds 196 (332)
T 2r8w_A 160 ALPLAIY-NNPTT-TRFTFSDELLVRLAY---IPNIRAIKMP 196 (332)
T ss_dssp SSCEEEE-CCHHH-HCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred CCCEEEE-eCccc-cCcCCCHHHHHHHHc---CCCEEEEEeC
Confidence 3454444 34443 899999998877764 2455555554
No 277
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=43.77 E-value=1.1e+02 Score=25.72 Aligned_cols=94 Identities=13% Similarity=0.055 Sum_probs=45.2
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+..+.++..+.. |- -|.+.+.+.++.. -.+.-++
T Consensus 8 VTGas~GIG~a~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g~id~l 81 (235)
T 3l6e_A 8 VTGAGSGLGRAL-TIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVA-DL----AHHEDVDVAFAAAVEWGGLPELV 81 (235)
T ss_dssp EESTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEC-CT----TSHHHHHHHHHHHHHHHCSCSEE
T ss_pred EECCCCHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEEC-CC----CCHHHHHHHHHHHHHhcCCCcEE
Confidence 456666663321 1233457877777654333333334433445666655 32 3556565554431 1112255
Q ss_pred EecCCCCCCCC--CCCHHHHHHHHH
Q 018820 225 LHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
+++-...+.+. ..+.++|++..+
T Consensus 82 vnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 82 LHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp EEECCCC------CCCHHHHHHHHH
T ss_pred EECCCCCCCCChHhCCHHHHHHHHH
Confidence 55544433332 457888877655
No 278
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=43.33 E-value=1.5e+02 Score=25.07 Aligned_cols=95 Identities=11% Similarity=0.012 Sum_probs=46.0
Q ss_pred cCCchhHHH-HHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEE
Q 018820 148 CLSGTGSLR-VGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIV 223 (350)
Q Consensus 148 t~G~~~al~-l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~ 223 (350)
..|+++++- .++.-++....|..|++..-.-.....+.+..|.++..+.. |- -|.+.+++.++.. -.+.-+
T Consensus 7 VTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 7 VTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVG-DI----TEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp ECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEES-CT----TSHHHHHHHHHHHHHHHSCCCE
T ss_pred EECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEEC-CC----CCHHHHHHHHHHHHHhcCCccE
Confidence 556666662 22222222233566766443333334444455667777766 32 3556665555431 111225
Q ss_pred EEecCCC-CCCC--CCCCHHHHHHHHH
Q 018820 224 LLHACAH-NPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 224 l~~~~p~-NPTG--~~~s~~~~~~i~~ 247 (350)
++++-.. .|.+ ...+.++|++..+
T Consensus 82 lvnnAg~~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 3kzv_A 82 LVANAGVLEPVQNVNEIDVNAWKKLYD 108 (254)
T ss_dssp EEEECCCCCCCTTTTSCCHHHHHHHHH
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHH
Confidence 5544332 2322 2467888877654
No 279
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=43.26 E-value=1.5e+02 Score=26.20 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=17.6
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHH
Q 018820 217 APAGAIVLLHACAHNPTGVDPTLQQWERIRQ 247 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~ 247 (350)
+...+++++ ++|. .||+.++.+.+.+|++
T Consensus 125 a~~lPiilY-n~P~-~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 125 HTDLPQILY-NVPS-RTGCDLLPETVGRLAK 153 (292)
T ss_dssp TCSSCEEEE-CCHH-HHSCCCCHHHHHHHHT
T ss_pred hcCCCEEEE-eCcc-hhccCCCHHHHHHHHc
Confidence 333454444 3333 3888999888877753
No 280
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=42.91 E-value=67 Score=28.31 Aligned_cols=18 Identities=6% Similarity=-0.140 Sum_probs=14.3
Q ss_pred ChHHHHHHcCCeEEEEEe
Q 018820 180 NHPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 180 ~~~~~~~~~G~~~~~v~~ 197 (350)
.....++..|++.+.+|+
T Consensus 36 ~~~~~lk~~G~N~VRi~~ 53 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVL 53 (302)
T ss_dssp THHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEc
Confidence 345567789999999998
No 281
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=42.10 E-value=1.7e+02 Score=25.16 Aligned_cols=99 Identities=8% Similarity=0.010 Sum_probs=50.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc--CC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS--AP 218 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~ 218 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-.....+.+..+.++..+.. |- -|.+.+.+.++. ..
T Consensus 30 ~k~vl--VTGas~GIG~ai-a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~-Dl----~~~~~v~~~~~~~~~~ 101 (281)
T 3ppi_A 30 GASAI--VSGGAGGLGEAT-VRRLHADGLGVVIADLAAEKGKALADELGNRAEFVST-NV----TSEDSVLAAIEAANQL 101 (281)
T ss_dssp TEEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-CT----TCHHHHHHHHHHHTTS
T ss_pred CCEEE--EECCCChHHHHH-HHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEc-CC----CCHHHHHHHHHHHHHh
Confidence 34454 556666763321 1233457877777654333334445555667777766 32 355655555442 22
Q ss_pred CCcEEEEecCC-CCCCC-------CCCCHHHHHHHHH
Q 018820 219 AGAIVLLHACA-HNPTG-------VDPTLQQWERIRQ 247 (350)
Q Consensus 219 ~~~~~l~~~~p-~NPTG-------~~~s~~~~~~i~~ 247 (350)
.+.-++++++. ..+.+ ...+.++|++..+
T Consensus 102 ~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T 3ppi_A 102 GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138 (281)
T ss_dssp SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHH
T ss_pred CCCCeEEEccCcccccccccccccccCCHHHHHHHHH
Confidence 22335555422 22222 3567777877654
No 282
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=41.58 E-value=49 Score=28.39 Aligned_cols=98 Identities=9% Similarity=0.036 Sum_probs=49.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CC
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---AP 218 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~ 218 (350)
++++ ..|+++++-... ...+...|..|++.+-.-.....+.+..|.++..+.. |- -|.+.+.+.++. .-
T Consensus 9 k~~l--VTGas~gIG~a~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~~~~ 80 (255)
T 4eso_A 9 KKAI--VIGGTHGMGLAT-VRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRS-DI----ADLNEIAVLGAAAGQTL 80 (255)
T ss_dssp CEEE--EETCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEC-CT----TCHHHHHHHHHHHHHHH
T ss_pred CEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEc-cC----CCHHHHHHHHHHHHHHh
Confidence 3444 456666663321 1233557877777654333334444455667777766 32 355555554432 11
Q ss_pred CCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 219 AGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
.+.-+++++-...+.+. ..+.++|++..+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFA 111 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22335554433332221 347888887765
No 283
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=41.07 E-value=1.2e+02 Score=25.99 Aligned_cols=99 Identities=8% Similarity=0.043 Sum_probs=49.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCC-CCCCh---HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQP-TWGNH---PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P-~y~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+++++ ..|+++++-... ...+...|..|++..- .-... ...++..|.++..+.. |- -|.+.+.+.++.
T Consensus 18 ~k~~l--VTGas~gIG~ai-a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~ 89 (270)
T 3is3_A 18 GKVAL--VTGSGRGIGAAV-AVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA-DI----RQVPEIVKLFDQ 89 (270)
T ss_dssp TCEEE--ESCTTSHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC-CT----TSHHHHHHHHHH
T ss_pred CCEEE--EECCCchHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEc-CC----CCHHHHHHHHHH
Confidence 34555 566667773321 1233557877766321 11111 2223445777777776 32 356666655543
Q ss_pred C---CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 217 A---PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 217 ~---~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
. -.+.-+++++-...+.+. ..+.++|++..+
T Consensus 90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 1 111225554443333333 357888887665
No 284
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=40.53 E-value=1.2e+02 Score=25.64 Aligned_cols=92 Identities=9% Similarity=0.021 Sum_probs=41.2
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l 224 (350)
..|+++++-... ...+...|..|++..-.-.......+..|+ ..+.. |- -|.+.+.+.++.. -.+.-++
T Consensus 10 VTGas~giG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~-D~----~~~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 10 ITGAAHGIGRAT-LELFAKEGARLVACDIEEGPLREAAEAVGA--HPVVM-DV----ADPASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp EESTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHTTTC--EEEEC-CT----TCHHHHHHHHHHHHHHHSSCCEE
T ss_pred EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHcCC--EEEEe-cC----CCHHHHHHHHHHHHHHcCCCCEE
Confidence 456666763221 122345677776654321122223333353 33433 21 3556665554431 0112255
Q ss_pred EecCCCCCCC--CCCCHHHHHHHHH
Q 018820 225 LHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
+++-...+.+ ...+.++|++..+
T Consensus 82 vn~Ag~~~~~~~~~~~~~~~~~~~~ 106 (245)
T 1uls_A 82 VHYAGITRDNFHWKMPLEDWELVLR 106 (245)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHH
Confidence 5544333332 2356788876544
No 285
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=40.46 E-value=1.1e+02 Score=26.21 Aligned_cols=92 Identities=10% Similarity=0.047 Sum_probs=42.7
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-......++..++..+..++ -|.+.+.+.++. .-.+.-++
T Consensus 32 VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv-------~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 32 ITGASQRVGLHC-ALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDF-------SCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp ESSTTSHHHHHH-HHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCT-------TSHHHHHHHHHHHHHHCSCCSEE
T ss_pred EECCCCHHHHHH-HHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCC-------CCHHHHHHHHHHHHHhcCCCCEE
Confidence 556666663321 1223456766666543333334445555644433322 355555554432 11112255
Q ss_pred EecCCCC-CCCCCCCHHHHHHHHH
Q 018820 225 LHACAHN-PTGVDPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~N-PTG~~~s~~~~~~i~~ 247 (350)
+++-... +.....+.++|++..+
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 104 VHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp EECCCCCCCCCTTCHHHHHHHHHH
T ss_pred EECCCccCCCCCCCCHHHHHHHHH
Confidence 5544322 2224556777766554
No 286
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=40.22 E-value=1.3e+02 Score=25.93 Aligned_cols=99 Identities=10% Similarity=0.079 Sum_probs=49.2
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCC--------CC--Ch---H---HHHHHcCCeEEEEEeecCCCCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT--------WG--NH---P---KVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~--------y~--~~---~---~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
+++++ ..|+++++-... ...+...|..|++.+-. |. .- . ..++..+.++..+.. |-
T Consensus 11 ~k~~l--VTGas~GIG~a~-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~---- 82 (277)
T 3tsc_A 11 GRVAF--ITGAARGQGRAH-AVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVV-DT---- 82 (277)
T ss_dssp TCEEE--EESTTSHHHHHH-HHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC-CT----
T ss_pred CCEEE--EECCccHHHHHH-HHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEC-CC----
Confidence 34555 556666663321 12335578777764220 10 11 1 122345667777766 32
Q ss_pred CCHHHHHHHhhc---CCCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 205 LNFQGLLEDLGS---APAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 205 ~d~~~l~~~l~~---~~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
-|.+.+.+.++. .-.+.-+++++-...+.+. ..+.++|++..+
T Consensus 83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 366666665543 1111225665544433332 467888877665
No 287
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=40.07 E-value=1.5e+02 Score=26.24 Aligned_cols=35 Identities=14% Similarity=0.113 Sum_probs=21.2
Q ss_pred CcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEc
Q 018820 220 GAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFD 259 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~D 259 (350)
.+++++ ++|.. ||+.++.+.+.+|++ -.++.=|=|
T Consensus 127 lPiilY-n~P~~-tg~~l~~~~~~~La~---~pnIvgiKd 161 (297)
T 2rfg_A 127 IPIIVY-NIPPR-AVVDIKPETMARLAA---LPRIVGVKD 161 (297)
T ss_dssp SCEEEE-ECHHH-HSCCCCHHHHHHHHT---STTEEEEEE
T ss_pred CCEEEE-eCccc-cCCCCCHHHHHHHHc---CCCEEEEEe
Confidence 344444 44443 899999988877753 245554544
No 288
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=39.65 E-value=1.8e+02 Score=24.87 Aligned_cols=98 Identities=13% Similarity=0.169 Sum_probs=46.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-....... +..|.++..+.. |- -|.+.+.+.++..
T Consensus 22 k~~l--VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-Dl----~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 22 RVAL--VTGGSRGLGFGI-AQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC-DV----SNYEEVKKLLEAV 93 (267)
T ss_dssp CEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC-CT----TCHHHHHHHHHHH
T ss_pred CEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEc-CC----CCHHHHHHHHHHH
Confidence 4444 456666763221 1233456777776543222222222 223667766665 32 3566666555421
Q ss_pred ---CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 218 ---PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ---~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-.....+ ...+.++|+++.+
T Consensus 94 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 94 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 01122555544333322 2357788876554
No 289
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=39.30 E-value=1.7e+02 Score=24.57 Aligned_cols=94 Identities=12% Similarity=0.024 Sum_probs=44.8
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCC-CChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTW-GNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIV 223 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y-~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~ 223 (350)
..|+++++-... ...+...|..|++.+-.- ......++..|.++..+.. |- -|.+.+++.++. .-.+.-+
T Consensus 12 VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~~~~g~id~ 85 (249)
T 2ew8_A 12 ITGGANGIGRAI-AERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKC-DV----SQPGDVEAFGKQVISTFGRCDI 85 (249)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHHHHHHSCCCE
T ss_pred EeCCCcHHHHHH-HHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEe-ec----CCHHHHHHHHHHHHHHcCCCCE
Confidence 456666663221 122345677776643221 1122234445667776666 32 356666655432 1111225
Q ss_pred EEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 224 LLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 224 l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
++++-...+.+ ...+.++|+++.+
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 86 LVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 56554333333 2357788766544
No 290
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=38.89 E-value=1.8e+02 Score=24.56 Aligned_cols=98 Identities=10% Similarity=-0.011 Sum_probs=48.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---C
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---P 218 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~ 218 (350)
++++ ..|+++++-... ...+...|..|++.+-.-.......+..+.++..+.. |- -|.+.+++.++.. -
T Consensus 10 k~vl--ITGas~gIG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 10 KVAL--ITGAGSGFGEGM-AKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAA-DI----SKEADVDAAVEAALSKF 81 (261)
T ss_dssp CEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-CT----TSHHHHHHHHHHHHHHH
T ss_pred CEEE--EECCCchHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEe-cC----CCHHHHHHHHHHHHHhc
Confidence 4444 556666663221 1233456777777654433344445556667777766 32 3555555554421 1
Q ss_pred CCcEEEEecCCCCC-CC--CCCCHHHHHHHHH
Q 018820 219 AGAIVLLHACAHNP-TG--VDPTLQQWERIRQ 247 (350)
Q Consensus 219 ~~~~~l~~~~p~NP-TG--~~~s~~~~~~i~~ 247 (350)
.+.-+++++-.... .+ ...+.++|++..+
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 11225555433221 22 2247788876543
No 291
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=38.80 E-value=1.6e+02 Score=25.99 Aligned_cols=27 Identities=7% Similarity=0.097 Sum_probs=15.7
Q ss_pred CchhHHHHHHHHHHHhcCC-CEEEEcCCCCC
Q 018820 150 SGTGSLRVGAEFLARHYHQ-RTIYIPQPTWG 179 (350)
Q Consensus 150 G~~~al~l~~~l~~~~~~g-d~Vlv~~P~y~ 179 (350)
+..+++.++-.. ..-| |.|++..|.|.
T Consensus 81 ~t~~ai~la~~a---~~~Gadavlv~~P~y~ 108 (291)
T 3a5f_A 81 NTAASIAMSKWA---ESIGVDGLLVITPYYN 108 (291)
T ss_dssp SHHHHHHHHHHH---HHTTCSEEEEECCCSS
T ss_pred cHHHHHHHHHHH---HhcCCCEEEEcCCCCC
Confidence 345566554211 1233 88998889874
No 292
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=38.10 E-value=1.5e+02 Score=25.65 Aligned_cols=100 Identities=5% Similarity=-0.028 Sum_probs=52.2
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCCh--HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNH--PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS- 216 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~--~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~- 216 (350)
.+++++ ..|++.++-.+. ...+...|-.|++.+-.-..- ...+...|.+...++. |- -|.+.+++.+++
T Consensus 6 ~gKval--VTGas~GIG~ai-a~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~v~~~ 77 (258)
T 4gkb_A 6 QDKVVI--VTGGASGIGGAI-SMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPV-EL----QDDAQCRDAVAQT 77 (258)
T ss_dssp TTCEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEEC-CT----TCHHHHHHHHHHH
T ss_pred CCCEEE--EeCCCCHHHHHH-HHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEe-ec----CCHHHHHHHHHHH
Confidence 345666 566666773321 123456776666654332222 2233456777777776 32 355555544433
Q ss_pred ---CCCCcEEEEecCC-CCCCCCCCCHHHHHHHHHH
Q 018820 217 ---APAGAIVLLHACA-HNPTGVDPTLQQWERIRQL 248 (350)
Q Consensus 217 ---~~~~~~~l~~~~p-~NPTG~~~s~~~~~~i~~~ 248 (350)
..+-. ++++|-. +.+.....+.++|++..+.
T Consensus 78 ~~~~G~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 78 IATFGRLD-GLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHHHSCCC-EEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHHhCCCC-EEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 12212 4443332 2345567889999887763
No 293
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=37.79 E-value=39 Score=27.92 Aligned_cols=67 Identities=22% Similarity=0.320 Sum_probs=43.7
Q ss_pred HHHHHcCCeEEEEEeecCCCC-CCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEE
Q 018820 183 KVFTLAGLSVKSYRYYDPATR-GLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLP 256 (350)
Q Consensus 183 ~~~~~~G~~~~~v~~~~~~~~-~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 256 (350)
.+++..|.+++.... +..+| ..+.+.+.+.+....++.++++|..+. .+.+-+.+|++..+++|.-+
T Consensus 112 ~~~~~~G~~~v~w~~-d~~Dw~~~~~~~i~~~~~~~~~g~IiL~Hd~~~------~t~~al~~ii~~l~~~Gy~~ 179 (195)
T 2cc0_A 112 SVEAKYGLTEVIWDV-DSQDWNNASTDAIVQAVSRLGNGQVILMHDWPA------NTLAAIPRIAQTLAGKGLCS 179 (195)
T ss_dssp HHHHHTTCEECCCSE-ECCGGGTCCHHHHHHHHHTCCTTCEEEEESSCH------HHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHCCCeEEEecc-CCCccCCCCHHHHHHHHhCcCcCeEEEECCCch------hHHHHHHHHHHHHHHCCCEE
Confidence 345567777655444 33332 356777777776666677888885431 25678899999999987543
No 294
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=37.76 E-value=23 Score=33.55 Aligned_cols=28 Identities=7% Similarity=0.197 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGF 265 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~ 265 (350)
|.++++++++-|+++|+-||.|-++--.
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 6899999999999999999999988654
No 295
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=37.71 E-value=2e+02 Score=24.98 Aligned_cols=99 Identities=9% Similarity=0.092 Sum_probs=49.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCC--C-------CCh---H---HHHHHcCCeEEEEEeecCCCCCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT--W-------GNH---P---KVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~--y-------~~~---~---~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
+.+++ ..|+++++-... ...+...|..|++.+-. . ..- . ..++..|.++..+.. |- -
T Consensus 28 gk~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~ 99 (299)
T 3t7c_A 28 GKVAF--ITGAARGQGRSH-AITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQV-DV----R 99 (299)
T ss_dssp TCEEE--EESTTSHHHHHH-HHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC-CT----T
T ss_pred CCEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEEC-CC----C
Confidence 34555 556666663321 12345678777764321 0 001 1 123345777777776 32 3
Q ss_pred CHHHHHHHhhc---CCCCcEEEEecCCCCCCC---CCCCHHHHHHHHH
Q 018820 206 NFQGLLEDLGS---APAGAIVLLHACAHNPTG---VDPTLQQWERIRQ 247 (350)
Q Consensus 206 d~~~l~~~l~~---~~~~~~~l~~~~p~NPTG---~~~s~~~~~~i~~ 247 (350)
|.+.+.+.++. .-.+.-+++++-...+.+ ...+.++|++..+
T Consensus 100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 56666655543 111122555544333333 2468888887665
No 296
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=37.43 E-value=1.9e+02 Score=24.42 Aligned_cols=94 Identities=10% Similarity=0.005 Sum_probs=45.1
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+..|.++..+.. |- -|.+.+.+.++.. -.+.-++
T Consensus 11 VTGas~giG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 11 VTGGASGVGLEV-VKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRH-DV----SSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp ETTTTSHHHHHH-HHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECC-CT----TCHHHHHHHHHHHHHHHCSCCEE
T ss_pred EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEc-cC----CCHHHHHHHHHHHHHHcCCCCEE
Confidence 556777773221 1223456877777654322223333333556666555 32 3566665554431 1111255
Q ss_pred EecCCCCCCC--CCCCHHHHHHHHH
Q 018820 225 LHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
+++-...+.+ ...+.++|++..+
T Consensus 85 v~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 85 VNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHH
Confidence 6554333322 2457788865543
No 297
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=37.10 E-value=1.8e+02 Score=25.69 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=49.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCC----------CCChHH---HHHHcCCeEEEEEeecCCCCCCCH
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT----------WGNHPK---VFTLAGLSVKSYRYYDPATRGLNF 207 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~----------y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~ 207 (350)
+.+++ ..|+++++-... ...+...|..|++.+-. -..... .++..|.++..+.. |- -|.
T Consensus 27 gk~vl--VTGas~GIG~ai-a~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~d~ 98 (322)
T 3qlj_A 27 GRVVI--VTGAGGGIGRAH-ALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGS-NV----ADW 98 (322)
T ss_dssp TCEEE--ETTTTSHHHHHH-HHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECC-CT----TSH
T ss_pred CCEEE--EECCCcHHHHHH-HHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEEC-CC----CCH
Confidence 34555 566667773321 12335578777775422 122222 23345777777665 32 356
Q ss_pred HHHHHHhhcC---CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 208 QGLLEDLGSA---PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 208 ~~l~~~l~~~---~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
+.+.+.++.. -.+.-+++++-.....+ ...+.++|++..+
T Consensus 99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 6666555431 01122555444333333 2467888877654
No 298
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=36.74 E-value=2e+02 Score=24.64 Aligned_cols=98 Identities=14% Similarity=0.114 Sum_probs=49.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA- 217 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~- 217 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.+ |- -|.+.+.+.++..
T Consensus 5 k~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~~ 76 (264)
T 3tfo_A 5 KVIL--ITGASGGIGEGI-ARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL-DV----TDRHSVAAFAQAAV 76 (264)
T ss_dssp CEEE--ESSTTSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEEC-CT----TCHHHHHHHHHHHH
T ss_pred CEEE--EeCCccHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEc-CC----CCHHHHHHHHHHHH
Confidence 4455 566667773321 123345787777654332222222 2344777777766 32 3566665554421
Q ss_pred --CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 218 --PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 218 --~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
-.+.-+++++-.-.+.+. ..+.++|++..+
T Consensus 77 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 77 DTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 111225665544443332 357888877655
No 299
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=36.60 E-value=91 Score=30.54 Aligned_cols=78 Identities=10% Similarity=-0.013 Sum_probs=47.2
Q ss_pred cCCCEEEEcCCCCCChHH-------HHHHcCCeEEE--EEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCC
Q 018820 166 YHQRTIYIPQPTWGNHPK-------VFTLAGLSVKS--YRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD 236 (350)
Q Consensus 166 ~~gd~Vlv~~P~y~~~~~-------~~~~~G~~~~~--v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~ 236 (350)
.+||+|++.....++... -+...|++++. ....+- ....+-++++..++.-.++-++.+|.
T Consensus 322 ~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~-SgHa~~~eL~~~~~~~~Pk~~ipvHG--------- 391 (555)
T 3zq4_A 322 NPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHT-SGHGGQEEQKLMLRLIKPKFFMPIHG--------- 391 (555)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCC-CSSCCHHHHHHHHHHSCEEEEEEESB---------
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEE-eCCCCHHHHHHHHHHhCCCEEEEcCC---------
Confidence 368999999887777552 23467888865 111011 23467788888776543334444543
Q ss_pred CCHHHHHHHHHHHHhcCc
Q 018820 237 PTLQQWERIRQLMRSKGL 254 (350)
Q Consensus 237 ~s~~~~~~i~~~~~~~~~ 254 (350)
....+.+.++++++.|+
T Consensus 392 -e~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 392 -EYRMQKMHVKLATDCGI 408 (555)
T ss_dssp -CHHHHHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHHHHHcCC
Confidence 24567777788877553
No 300
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=36.56 E-value=1.6e+02 Score=25.23 Aligned_cols=99 Identities=9% Similarity=0.063 Sum_probs=48.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCC-CCCCh---HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQP-TWGNH---PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P-~y~~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+++++ ..|+++++-... ...+...|..|++..- .-... ...++..|.++..+.. |- -|.+.+.+.++.
T Consensus 28 ~k~vl--VTGas~gIG~ai-a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~d~~~v~~~~~~ 99 (269)
T 4dmm_A 28 DRIAL--VTGASRGIGRAI-ALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA-DV----SQESEVEALFAA 99 (269)
T ss_dssp TCEEE--ETTCSSHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC-CT----TSHHHHHHHHHH
T ss_pred CCEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEEC-CC----CCHHHHHHHHHH
Confidence 34555 566667773321 1233557877766432 11111 1223345677777766 32 356666655543
Q ss_pred C---CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 217 A---PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 217 ~---~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
. -.+.-+++++-...+.+ ...+.++|+++.+
T Consensus 100 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 100 VIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 1 11122556544333333 2457888887655
No 301
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=36.39 E-value=2.1e+02 Score=24.65 Aligned_cols=101 Identities=9% Similarity=-0.026 Sum_probs=49.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF---TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
+++++ ..|+++++-... ...+...|..|++.+-.-....... +..|.++..+.. |-.+ .-+.+.+.+.+.+.
T Consensus 33 gk~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv~~-~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 33 GRTAL--VTGSSRGIGAAI-AEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAG-DLSE-AGAGTDLIERAEAI 107 (275)
T ss_dssp TCEEE--ETTCSSHHHHHH-HHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEEC-CTTS-TTHHHHHHHHHHHH
T ss_pred CCEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEe-cCCC-HHHHHHHHHHHHHh
Confidence 34555 566666773321 1233456877776544333333333 344777777766 3321 12334444433332
Q ss_pred CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 218 PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 218 ~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
. +.-+++++-...+.+. ..+.++|++..+
T Consensus 108 g-~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 108 A-PVDILVINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp S-CCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred C-CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 1 2225555443333222 357888876654
No 302
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=36.04 E-value=45 Score=25.89 Aligned_cols=55 Identities=13% Similarity=0.173 Sum_probs=30.5
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCCCCCC-CCHHHH---HHHHHHHHh-----cCcEEEEccCCCCCCC
Q 018820 209 GLLEDLGSAPAGAIVLLHACAHNPTGVD-PTLQQW---ERIRQLMRS-----KGLLPFFDSAYQGFAS 267 (350)
Q Consensus 209 ~l~~~l~~~~~~~~~l~~~~p~NPTG~~-~s~~~~---~~i~~~~~~-----~~~~ii~DeaY~~~~~ 267 (350)
-++.++.... ..++++||. |+|.. +|.+++ ++|.+.++- .|.+||-|+-|..|..
T Consensus 59 i~~~Al~~~A-~~vIl~HNH---PSG~~~PS~~D~~~T~~l~~a~~ll~I~llDHiIig~~~~~Sf~e 122 (126)
T 2qlc_A 59 IFKAAIRESA-HSIILVHNH---PSGDVQPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRD 122 (126)
T ss_dssp HHHHHHHTTC-SEEEEEEEC---SSSCCSCCHHHHHHHHHHHHHHHHHTCEEEEEEEECSSCEEETTT
T ss_pred HHHHHHHcCC-cEEEEEecC---CCCCCCCCHHHHHHHHHHHHHHHHCCCeEeeeEEEeCCcEEEecc
Confidence 3445555433 355666644 55544 455554 345555544 5678888877766553
No 303
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=35.68 E-value=1.9e+02 Score=23.92 Aligned_cols=94 Identities=7% Similarity=-0.035 Sum_probs=47.7
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCC
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAG 220 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~ 220 (350)
..|+++++-... ...+...|..|++..-.-....... +..|.++..+.. |- -|.+.+.+.+++. -.+
T Consensus 7 ITGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 7 ITGASRGIGEAI-ARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHL-DV----SKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp EESCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC-CT----TCHHHHHHHCC-HHHHHSS
T ss_pred EECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEe-cc----CCHHHHHHHHHHHHHhcCC
Confidence 446666663211 1223456777776554322222222 245677777766 32 4677777665531 011
Q ss_pred cEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 221 AIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
.-+++++-...+.+. ..+.++|++..+
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHH
Confidence 225665544444333 347888877554
No 304
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=35.65 E-value=2e+02 Score=24.26 Aligned_cols=94 Identities=7% Similarity=-0.030 Sum_probs=43.0
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+..|.++..+.. |- -|.+.+.+.++.. -.+.-++
T Consensus 10 VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 10 ITGGARGLGAEA-ARQAVAAGARVVLADVLDEEGAATARELGDAARYQHL-DV----TIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEEC-CT----TCHHHHHHHHHHHHHHHSCCCEE
T ss_pred EECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEe-cC----CCHHHHHHHHHHHHHHcCCCCEE
Confidence 456666663211 1223456777766543211222333333555666655 32 3556666555421 0111255
Q ss_pred EecCCCCCCC--CCCCHHHHHHHHH
Q 018820 225 LHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
+++-...+.+ ...+.++|++..+
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 84 VNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHH
Confidence 5543322222 1356777765443
No 305
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=35.44 E-value=2e+02 Score=24.15 Aligned_cols=94 Identities=11% Similarity=-0.007 Sum_probs=47.3
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+..+.++..+.. |- -|.+.+.+.++.. -.+.-++
T Consensus 17 VTGasggiG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g~id~l 90 (265)
T 2o23_A 17 ITGGASGLGLAT-AERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA-DV----TSEKDVQTALALAKGKFGRVDVA 90 (265)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEEC-CT----TCHHHHHHHHHHHHHHHSCCCEE
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEc-CC----CCHHHHHHHHHHHHHHCCCCCEE
Confidence 456666763211 1223456777766544434455555555666766665 32 3566666655421 0112255
Q ss_pred EecCCCCCCCC--------CCCHHHHHHHHH
Q 018820 225 LHACAHNPTGV--------DPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~NPTG~--------~~s~~~~~~i~~ 247 (350)
+++-.....+. ..+.++|++..+
T Consensus 91 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 2o23_A 91 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLD 121 (265)
T ss_dssp EECCCCCCCCCSEETTTTEECCHHHHHHHHH
T ss_pred EECCccCCCCccccccccCCCCHHHHHHHHH
Confidence 65543332222 257777776543
No 306
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=35.20 E-value=2.1e+02 Score=24.47 Aligned_cols=99 Identities=10% Similarity=0.036 Sum_probs=49.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH----HHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF----TLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~----~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-....... ...|.++..+.. |- -|.+.+.+.++.
T Consensus 27 ~k~~l--VTGas~GIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~ 98 (277)
T 4fc7_A 27 DKVAF--ITGGGSGIGFRI-AEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM-DV----RAPPAVMAAVDQ 98 (277)
T ss_dssp TCEEE--EETTTSHHHHHH-HHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEEC-CT----TCHHHHHHHHHH
T ss_pred CCEEE--EeCCCchHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEc-CC----CCHHHHHHHHHH
Confidence 34555 556666763321 1234567877776543322222222 234677777766 32 355666555443
Q ss_pred C---CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 217 A---PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 217 ~---~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
. -.+.-+++++-...+.+. ..+.++|++..+
T Consensus 99 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 99 ALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHH
Confidence 1 111225555443333222 367888887655
No 307
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=34.56 E-value=22 Score=36.16 Aligned_cols=29 Identities=14% Similarity=0.378 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|.++|+-||.|-+|....
T Consensus 253 ~~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 253 RIAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred hHHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 47999999999999999999999886443
No 308
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.44 E-value=1.5e+02 Score=25.49 Aligned_cols=99 Identities=12% Similarity=0.042 Sum_probs=48.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCC--------CC--Ch------HHHHHHcCCeEEEEEeecCCCCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT--------WG--NH------PKVFTLAGLSVKSYRYYDPATRG 204 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~--------y~--~~------~~~~~~~G~~~~~v~~~~~~~~~ 204 (350)
+.+++ ..|+++++-... ...+...|-.|++.+-. |. .- ...++..|.++..+.. |-
T Consensus 15 gk~~l--VTGas~gIG~a~-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv---- 86 (280)
T 3pgx_A 15 GRVAF--ITGAARGQGRSH-AVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVL-DV---- 86 (280)
T ss_dssp TCEEE--EESTTSHHHHHH-HHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEEC-CT----
T ss_pred CCEEE--EECCCcHHHHHH-HHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEc-CC----
Confidence 34555 556666663321 12335678777765321 11 11 1123345677777766 32
Q ss_pred CCHHHHHHHhhc---CCCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 205 LNFQGLLEDLGS---APAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 205 ~d~~~l~~~l~~---~~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
-|.+.+++.+++ .-.+.-+++++-...+.+. ..+.++|++..+
T Consensus 87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 87 RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 356666655543 1111225665544333332 357888876544
No 309
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=34.03 E-value=2.2e+02 Score=24.42 Aligned_cols=98 Identities=12% Similarity=0.100 Sum_probs=48.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA- 217 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~- 217 (350)
++++ ..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.++..
T Consensus 25 k~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 25 QTAF--VTGVSSGIGLAV-ARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSC-DV----TSTDEVHAAVAAAV 96 (279)
T ss_dssp CEEE--EESTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEEC-CT----TCHHHHHHHHHHHH
T ss_pred CEEE--EeCCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEC-CC----CCHHHHHHHHHHHH
Confidence 4455 556666663321 123345687777654332222222 2334667777766 32 3566666555431
Q ss_pred --CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 218 --PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 --~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+.+ ...+.++|+++.+
T Consensus 97 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 97 ERFGPIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp HHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 11122556554433333 2367888876554
No 310
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=32.96 E-value=2.5e+02 Score=24.50 Aligned_cols=98 Identities=9% Similarity=0.128 Sum_probs=48.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA- 217 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~- 217 (350)
.+++ ..|+++++-... ...+...|-.|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.++..
T Consensus 32 k~vl--VTGas~gIG~~l-a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~~ 103 (301)
T 3tjr_A 32 RAAV--VTGGASGIGLAT-ATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC-DV----RHLDEMVRLADEAF 103 (301)
T ss_dssp CEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHHH
T ss_pred CEEE--EeCCCCHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEc-cC----CCHHHHHHHHHHHH
Confidence 4444 556666763321 123345677777654432222222 2334667777766 32 3566666555431
Q ss_pred --CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 218 --PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 218 --~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
-.+.-+++++-.-.+.+. ..+.++|++..+
T Consensus 104 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 104 RLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 011125555443333332 467888877655
No 311
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=32.85 E-value=2.2e+02 Score=23.97 Aligned_cols=94 Identities=16% Similarity=0.068 Sum_probs=44.3
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC-hHHHHHH---c-CCeEEEEEeecCCCCCCCHHHHHHHhhcC---CC
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN-HPKVFTL---A-GLSVKSYRYYDPATRGLNFQGLLEDLGSA---PA 219 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~-~~~~~~~---~-G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~ 219 (350)
..|+++++-... ...+...|..|++.+-.-.. .....+. . |.++..+.. |- -|.+.+.+.++.. -.
T Consensus 9 VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 9 VTGSTSGIGLGI-ATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA-DL----SKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp ETTCSSHHHHHH-HHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECC-CT----TSHHHHHHHHHHHHHHHS
T ss_pred EeCCCcHHHHHH-HHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEEC-CC----CCHHHHHHHHHHHHHhcC
Confidence 556666773221 12234568777765433222 2222221 1 666666655 32 3566666555431 01
Q ss_pred CcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 220 GAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
+.-+++++-...+.+ ...+.++|++..+
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 111555544333222 2357888876544
No 312
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=32.58 E-value=2.3e+02 Score=23.95 Aligned_cols=94 Identities=14% Similarity=0.010 Sum_probs=41.8
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+....++..+.. | --|.+.+.+.++.. -.+.-++
T Consensus 17 VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D----~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 17 VTGGSKGIGAAI-ARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEV-D----VTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEEC-C----TTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred EeCCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEE-e----CCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456666663211 1223456777776532211122222222223444444 2 23566666555421 0111255
Q ss_pred EecCCCCCCC--CCCCHHHHHHHHH
Q 018820 225 LHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
+++-...+.+ ...+.++|++..+
T Consensus 91 v~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 91 CANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHH
Confidence 6544333322 2357788876554
No 313
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=32.58 E-value=48 Score=29.48 Aligned_cols=48 Identities=8% Similarity=0.075 Sum_probs=31.4
Q ss_pred CHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEccCC
Q 018820 206 NFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDSAY 262 (350)
Q Consensus 206 d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~DeaY 262 (350)
-.+.++++++... ..+++++. | ++.++.+++.+.|+++++.++-.++.
T Consensus 77 ~~~~~~ea~~~Gi--~~iVi~t~-----G--~~~~~~~~l~~~A~~~gv~liGPNc~ 124 (288)
T 2nu8_A 77 CKDSILEAIDAGI--KLIITITE-----G--IPTLDMLTVKVKLDEAGVRMIGPNTP 124 (288)
T ss_dssp HHHHHHHHHHTTC--SEEEECCC-----C--CCHHHHHHHHHHHHHHTCEEECSSCC
T ss_pred HHHHHHHHHHCCC--CEEEEECC-----C--CCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 3555666665433 23344322 4 36778889999999999988867654
No 314
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=31.98 E-value=2.1e+02 Score=24.43 Aligned_cols=94 Identities=7% Similarity=-0.009 Sum_probs=42.8
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+..+.++..+.. |- -|.+.+.+.++.. -.+.-++
T Consensus 11 ITGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 11 VTGAASGIGRAA-LDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVA-DV----SDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp EESTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEEC-CT----TSHHHHHHHHHHHHHHHSCCCEE
T ss_pred EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEc-CC----CCHHHHHHHHHHHHHHcCCCcEE
Confidence 456666763221 1223456777776543222223333334445665655 32 3566666555431 1111255
Q ss_pred EecCCCCCCC--CCCCHHHHHHHHH
Q 018820 225 LHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
+++-...+.+ ...+.++|+++.+
T Consensus 85 vnnAg~~~~~~~~~~~~~~~~~~~~ 109 (263)
T 2a4k_A 85 AHFAGVAHSALSWNLPLEAWEKVLR 109 (263)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHH
Confidence 6554333332 2356777775544
No 315
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=31.81 E-value=2.4e+02 Score=24.36 Aligned_cols=99 Identities=11% Similarity=0.097 Sum_probs=52.8
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCC-ChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWG-NHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP 218 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~-~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 218 (350)
..++++ ..|++.++-.+. ...+...|-.|++.+-.-. .....++..|.+...+.. |-. |.+..++.++..
T Consensus 8 ~GKval--VTGas~GIG~ai-A~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~-Dv~----d~~~v~~~~~~g- 78 (247)
T 4hp8_A 8 EGRKAL--VTGANTGLGQAI-AVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLI-DFA----DPLAAKDSFTDA- 78 (247)
T ss_dssp TTCEEE--ETTTTSHHHHHH-HHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEEC-CTT----STTTTTTSSTTT-
T ss_pred CCCEEE--EeCcCCHHHHHH-HHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEc-cCC----CHHHHHHHHHhC-
Confidence 355666 667777773332 2234567877776543211 223445677888888776 321 233333333321
Q ss_pred CCcEEEEecCCCCCCC--CCCCHHHHHHHHHH
Q 018820 219 AGAIVLLHACAHNPTG--VDPTLQQWERIRQL 248 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~~ 248 (350)
+.-++++|-.-++.+ ..++.++|+++.++
T Consensus 79 -~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 79 -GFDILVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp -CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred -CCCEEEECCCCCCCCCcccccHHHHHHHHHH
Confidence 122445443333333 35689999988774
No 316
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=31.77 E-value=2.4e+02 Score=24.09 Aligned_cols=98 Identities=9% Similarity=0.066 Sum_probs=45.1
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc--
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-- 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 216 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.++.
T Consensus 23 k~vl--VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~ 94 (277)
T 2rhc_B 23 EVAL--VTGATSGIGLEI-ARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC-DV----RSVPEIEALVAAVV 94 (277)
T ss_dssp CEEE--EETCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHHH
T ss_pred CEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEC-CC----CCHHHHHHHHHHHH
Confidence 3444 456666663221 122345676776643221112222 2233666666665 32 356666555442
Q ss_pred -CCCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 217 -APAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 217 -~~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
.-.+.-+++++-...+.+ ...+.++|++..+
T Consensus 95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 95 ERYGPVDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 111122555544333322 2357788876544
No 317
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=31.42 E-value=2.5e+02 Score=24.07 Aligned_cols=56 Identities=9% Similarity=0.150 Sum_probs=29.8
Q ss_pred HcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEEEEecCCCCCCCC---CCCHHHHHHHHH
Q 018820 187 LAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIVLLHACAHNPTGV---DPTLQQWERIRQ 247 (350)
Q Consensus 187 ~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~l~~~~p~NPTG~---~~s~~~~~~i~~ 247 (350)
..|.++..+.. |- -|.+.+.+.++. .-.+.-+++++-...+.+. ..+.++|++..+
T Consensus 73 ~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 73 GHNRRIVTAEV-DV----RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp TTTCCEEEEEC-CT----TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred hcCCceEEEEc-CC----CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHH
Confidence 34667777766 32 356666655543 1111225555544333332 357888887665
No 318
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=30.73 E-value=2.6e+02 Score=24.03 Aligned_cols=98 Identities=12% Similarity=0.063 Sum_probs=48.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA- 217 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~- 217 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.. |- -|.+.+++.+++.
T Consensus 33 k~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dl----~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 33 KRAL--ITGASTGIGKKV-ALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC-DV----TQPDQVRGMLDQMT 104 (276)
T ss_dssp CEEE--EESTTSHHHHHH-HHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEEC-CT----TCHHHHHHHHHHHH
T ss_pred CEEE--EeCCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEc-CC----CCHHHHHHHHHHHH
Confidence 4444 556666763321 123345687777654433333333 2345667777766 32 3566666555431
Q ss_pred --CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 218 --PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 218 --~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+.+. ..+.++|+++.+
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 011125555443333322 457888875544
No 319
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=30.56 E-value=2.3e+02 Score=23.50 Aligned_cols=94 Identities=6% Similarity=0.096 Sum_probs=46.5
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH---HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCc
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK---VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGA 221 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~ 221 (350)
..|+++++-... ...+...|..|++..-.-..... .++..|.++..+.. |- -|.+.+.+.++. ...+.
T Consensus 10 ITGas~gIG~~~-a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 10 VTGASRGIGFEV-AHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL-NI----SDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp ESSCSSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHHHHTTCCC
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEe-cC----CCHHHHHHHHHHHHHHcCCC
Confidence 556666663221 12234567777765443222222 23345777777766 32 355555554433 21122
Q ss_pred EEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 222 IVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 222 ~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
-+++++-...+.+. ..+.++|++..+
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 84 DILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 25565543333332 457788876554
No 320
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=30.52 E-value=2.5e+02 Score=23.75 Aligned_cols=99 Identities=10% Similarity=0.033 Sum_probs=49.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-...... +...|.++..+.+ |- -|.+.+.+.++..
T Consensus 29 ~k~vl--ITGas~gIG~~l-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 29 GQVAV--VTGASRGIGAAI-ARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC-DL----SHSDAIAAFATGV 100 (262)
T ss_dssp TCEEE--ESSTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEC-CT----TCHHHHHHHHHHH
T ss_pred CCEEE--EECCCChHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEe-cC----CCHHHHHHHHHHH
Confidence 34555 566777773321 123345677777665433222222 2345667777766 32 3566666554431
Q ss_pred ---CCCcEEEEecCCC-CCCC--CCCCHHHHHHHHH
Q 018820 218 ---PAGAIVLLHACAH-NPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ---~~~~~~l~~~~p~-NPTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-.. .+.+ ...+.++|++..+
T Consensus 101 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp HHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 0111255554433 2322 2367788876544
No 321
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=30.28 E-value=2.6e+02 Score=23.96 Aligned_cols=94 Identities=10% Similarity=0.033 Sum_probs=47.9
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~l 224 (350)
..|++.++-.+. ...+...|-.|++.+-.-..... +...+.+...+.. |- -|.+.+++.+++ +-.+.-++
T Consensus 7 VTGas~GIG~ai-a~~la~~Ga~V~~~~~~~~~~~~-~~~~~~~~~~~~~-Dv----~~~~~v~~~v~~~~~~~g~iDiL 79 (247)
T 3ged_A 7 VTGGGHGIGKQI-CLDFLEAGDKVCFIDIDEKRSAD-FAKERPNLFYFHG-DV----ADPLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp EESTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHH-HHTTCTTEEEEEC-CT----TSHHHHHHHHHHHHHHHSCCCEE
T ss_pred EecCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHH-HHHhcCCEEEEEe-cC----CCHHHHHHHHHHHHHHcCCCCEE
Confidence 445566663321 22345678888776533221222 2234556666665 32 355555555443 11112255
Q ss_pred EecCCCCCCCC--CCCHHHHHHHHHH
Q 018820 225 LHACAHNPTGV--DPTLQQWERIRQL 248 (350)
Q Consensus 225 ~~~~p~NPTG~--~~s~~~~~~i~~~ 248 (350)
++|-..++.+. .++.++|+++.++
T Consensus 80 VNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 80 VNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 55444444443 4678999988764
No 322
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=30.14 E-value=3.4e+02 Score=25.38 Aligned_cols=68 Identities=10% Similarity=0.000 Sum_probs=34.0
Q ss_pred CCcEEEEecCCchhHHHHHHHHHHHhc-CCCEEEEcCCCCCC---------------hHHHHHHcCCeEEEEEeecCCCC
Q 018820 140 ENRVTTVQCLSGTGSLRVGAEFLARHY-HQRTIYIPQPTWGN---------------HPKVFTLAGLSVKSYRYYDPATR 203 (350)
Q Consensus 140 ~~~v~~~~t~G~~~al~l~~~l~~~~~-~gd~Vlv~~P~y~~---------------~~~~~~~~G~~~~~v~~~~~~~~ 203 (350)
...+++ ..|++.++-.+.. .++.. .|-.|++.+-.-.. ....++..|.+...+.. |-
T Consensus 46 ~gKvaL--VTGas~GIG~AiA-~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~-Dv--- 118 (405)
T 3zu3_A 46 GPKRVL--VIGASTGYGLAAR-ITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSING-DA--- 118 (405)
T ss_dssp CCSEEE--EESCSSHHHHHHH-HHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEES-CT---
T ss_pred CCCEEE--EeCcchHHHHHHH-HHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEEC-CC---
Confidence 345555 5566666633322 23344 57666653211111 12244567888877766 32
Q ss_pred CCCHHHHHHHhh
Q 018820 204 GLNFQGLLEDLG 215 (350)
Q Consensus 204 ~~d~~~l~~~l~ 215 (350)
.|.+.+.+.++
T Consensus 119 -td~~~v~~~v~ 129 (405)
T 3zu3_A 119 -FSDEIKQLTID 129 (405)
T ss_dssp -TSHHHHHHHHH
T ss_pred -CCHHHHHHHHH
Confidence 35565555544
No 323
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=30.05 E-value=3e+02 Score=24.54 Aligned_cols=37 Identities=11% Similarity=0.108 Sum_probs=21.6
Q ss_pred CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 219 AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 219 ~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
..+++++ ++|. .||+.++.+.+.+|++ -.++.=|=|.
T Consensus 134 ~lPiilY-n~P~-~tg~~l~~~~~~~La~---~pnIvgiKds 170 (311)
T 3h5d_A 134 DLPIIIY-NIPG-RVVVELTPETMLRLAD---HPNIIGVKEC 170 (311)
T ss_dssp SSCEEEE-ECHH-HHSSCCCHHHHHHHHT---STTEEEEEEC
T ss_pred CCCEEEE-eccc-ccCCCCCHHHHHHHhc---CCCEEEEEeC
Confidence 4454444 2332 2788888888776654 3456556553
No 324
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=29.98 E-value=2.5e+02 Score=23.72 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=41.4
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+..+.++..+.. |- -|.+.+.+.++.. -.+.-++
T Consensus 12 VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 12 VSGGARGMGASH-VRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHL-DV----TQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEEC-CT----TCHHHHHHHHHHHHHHHSCCCEE
T ss_pred EeCCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEe-cC----CCHHHHHHHHHHHHHHcCCCCEE
Confidence 456666663211 1223456777776432211222222333323445544 32 3566666655421 0111255
Q ss_pred EecCCCCCCC--CCCCHHHHHHHH
Q 018820 225 LHACAHNPTG--VDPTLQQWERIR 246 (350)
Q Consensus 225 ~~~~p~NPTG--~~~s~~~~~~i~ 246 (350)
+++-...+.+ ...+.++|++..
T Consensus 86 v~~Ag~~~~~~~~~~~~~~~~~~~ 109 (260)
T 1nff_A 86 VNNAGILNIGTIEDYALTEWQRIL 109 (260)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHH
Confidence 6544333322 235677775443
No 325
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=29.92 E-value=2.6e+02 Score=23.80 Aligned_cols=96 Identities=9% Similarity=0.064 Sum_probs=47.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCC-------CC--ChH------HHHHHcCCeEEEEEeecCCCCCCC
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT-------WG--NHP------KVFTLAGLSVKSYRYYDPATRGLN 206 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~-------y~--~~~------~~~~~~G~~~~~v~~~~~~~~~~d 206 (350)
.+++ ..|+++++-... ...+...|..|++.+-. |. .-. ..++..|.++..+.. |- -|
T Consensus 14 k~vl--VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~ 85 (278)
T 3sx2_A 14 KVAF--ITGAARGQGRAH-AVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQA-DV----RD 85 (278)
T ss_dssp CEEE--EESTTSHHHHHH-HHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEEC-CT----TC
T ss_pred CEEE--EECCCChHHHHH-HHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeC-CC----CC
Confidence 4444 556666663221 12335578777664322 11 011 122345677777766 32 35
Q ss_pred HHHHHHHhhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHH
Q 018820 207 FQGLLEDLGSA---PAGAIVLLHACAHNPTGVDPTLQQWERIRQ 247 (350)
Q Consensus 207 ~~~l~~~l~~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~ 247 (350)
.+.+.+.++.. -.+.-+++++-...+.+. +.++|++..+
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHH
Confidence 66666655431 011225665544444333 6788877654
No 326
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=29.76 E-value=2.1e+02 Score=25.99 Aligned_cols=39 Identities=21% Similarity=0.224 Sum_probs=23.8
Q ss_pred CCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 217 APAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
....+++ +-++| .||+.++.+.+.+|+ ++-.++.=|=|.
T Consensus 149 a~~lPii-lYn~P--~tg~~l~~e~~~~L~--a~~pnIvGiKds 187 (344)
T 2hmc_A 149 APEIPAV-IYNSP--YYGFATRADLFFALR--AEHKNLVGFKEF 187 (344)
T ss_dssp STTSCEE-EEEBG--GGTBCCCHHHHHHHH--HHCTTEEEEEEC
T ss_pred CCCCcEE-EEecC--ccCCCcCHHHHHHHH--hcCCCEEEEEcC
Confidence 3344544 44556 699999999887772 233456555453
No 327
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=29.34 E-value=1.8e+02 Score=25.93 Aligned_cols=92 Identities=18% Similarity=0.279 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeec
Q 018820 120 AEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYD 199 (350)
Q Consensus 120 ~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~ 199 (350)
.++.+.+.+...|+ --=|+-+-+++..+++.+ .-.+.-..-|.|++..|.|
T Consensus 67 ~~v~~~~~~~~~gr------vpViaGvg~~~t~~ai~l--a~~A~~~Gadavlv~~P~y--------------------- 117 (303)
T 2wkj_A 67 EQVLEIVAEEAKGK------IKLIAHVGCVSTAESQQL--AASAKRYGFDAVSAVTPFY--------------------- 117 (303)
T ss_dssp HHHHHHHHHHHTTT------SEEEEECCCSSHHHHHHH--HHHHHHHTCSEEEEECCCS---------------------
T ss_pred HHHHHHHHHHhCCC------CcEEEecCCCCHHHHHHH--HHHHHhCCCCEEEecCCCC---------------------
Q ss_pred CCCCCCCHHHHHHHhhc---CCC-CcEEEEecCCCCC--CCCCCCHHHHHHHHH
Q 018820 200 PATRGLNFQGLLEDLGS---APA-GAIVLLHACAHNP--TGVDPTLQQWERIRQ 247 (350)
Q Consensus 200 ~~~~~~d~~~l~~~l~~---~~~-~~~~l~~~~p~NP--TG~~~s~~~~~~i~~ 247 (350)
+.++.+++.+.++. +.+ .+++++ ||| ||+.++.+.+.+|++
T Consensus 118 ---~~~s~~~l~~~f~~va~a~~~lPiilY----n~P~~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 118 ---YPFSFEEHCDHYRAIIDSADGLPMVVY----NIPALSGVKLTLDQINTLVT 164 (303)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHTTCCEEEE----ECHHHHCCCCCHHHHHHHHT
T ss_pred ---CCCCHHHHHHHHHHHHHhCCCCCEEEE----eCccccCCCCCHHHHHHHhc
No 328
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.17 E-value=2.9e+02 Score=24.21 Aligned_cols=99 Identities=15% Similarity=0.116 Sum_probs=49.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCC-------CC--Ch---H---HHHHHcCCeEEEEEeecCCCCCC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT-------WG--NH---P---KVFTLAGLSVKSYRYYDPATRGL 205 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~-------y~--~~---~---~~~~~~G~~~~~v~~~~~~~~~~ 205 (350)
+.+++ ..|+++++-... ...+...|..|++.+-. |. .- . ..++..|.++..+.. |- -
T Consensus 46 gk~~l--VTGas~GIG~ai-a~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~ 117 (317)
T 3oec_A 46 GKVAF--ITGAARGQGRTH-AVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQA-DV----R 117 (317)
T ss_dssp TCEEE--ESSCSSHHHHHH-HHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEEC-CT----T
T ss_pred CCEEE--EeCCCcHHHHHH-HHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEEC-CC----C
Confidence 34555 566667773321 12335578777764321 11 01 1 123345777777766 32 3
Q ss_pred CHHHHHHHhhcC---CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 206 NFQGLLEDLGSA---PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 206 d~~~l~~~l~~~---~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
|.+.+.+.++.. -.+.-+++++-...+.+ ...+.++|+++.+
T Consensus 118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 118 DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 566666555431 11122555544333333 3567888877665
No 329
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=29.15 E-value=2.6e+02 Score=24.01 Aligned_cols=66 Identities=9% Similarity=-0.071 Sum_probs=35.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
++++ ..|+++++-... ...+...|..|++.+-.-.....+....+.++..+.. |- -|.+.+.+.++
T Consensus 6 k~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~ 71 (281)
T 3zv4_A 6 EVAL--ITGGASGLGRAL-VDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVG-DV----RSLQDQKRAAE 71 (281)
T ss_dssp CEEE--EETCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEEC-CT----TCHHHHHHHHH
T ss_pred CEEE--EECCCcHHHHHH-HHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEc-CC----CCHHHHHHHHH
Confidence 3444 556666663321 1233557877877654433344445556667777766 32 35555555544
No 330
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=28.92 E-value=2.7e+02 Score=23.76 Aligned_cols=99 Identities=11% Similarity=0.077 Sum_probs=49.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHH---HHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPK---VFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~---~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
+.+++ ..|+++++-... ...+...|-.|++.+-.-..... .++..|.++..+.. |- -|.+.+.+.++..
T Consensus 28 ~k~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 28 KQVAI--VTGASRGIGRAI-ALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL-NV----NDATAVDALVEST 99 (270)
T ss_dssp TCEEE--ETTCSSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEEC-CT----TCHHHHHHHHHHH
T ss_pred CCEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEE-eC----CCHHHHHHHHHHH
Confidence 44555 566777773321 12335578777765433222222 23345666666665 32 3566666555431
Q ss_pred ---CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 218 ---PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ---~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+.+ ...+.++|++..+
T Consensus 100 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 100 LKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 11122555544333322 3467888887654
No 331
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=28.50 E-value=2.6e+02 Score=23.43 Aligned_cols=94 Identities=11% Similarity=0.054 Sum_probs=43.6
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCc
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGA 221 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~ 221 (350)
..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.++. .-.+.
T Consensus 7 VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 7 VTGAGQGIGKAI-ALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKV-DV----SDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CT----TSHHHHHHHHHHHHHHTTCC
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEe-cC----CCHHHHHHHHHHHHHHhCCC
Confidence 456666663221 122345677776653221111222 2233666666665 32 356666655542 11112
Q ss_pred EEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 222 IVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 222 ~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
-+++++-...+.+ ...+.++|+++.+
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2556544333333 2356777765443
No 332
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=28.37 E-value=2.6e+02 Score=23.36 Aligned_cols=94 Identities=17% Similarity=0.163 Sum_probs=44.3
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCc
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF---TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGA 221 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~ 221 (350)
..|+++++-... ...+...|..|++.+-.-....... +..|.++..+.. |- -|.+.+.+.++.. -.+.
T Consensus 12 VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv----~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 12 ITGASSGIGEAT-ARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL-DV----ADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp EESCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHHHHHHSCC
T ss_pred EECCCCHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEC-CC----CCHHHHHHHHHHHHHHcCCC
Confidence 456666663321 1233456777766532211122222 223666766665 32 3566666555421 0111
Q ss_pred EEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 222 IVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 222 ~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
-+++++-...+.+ ...+.++|+++.+
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 86 DILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp SEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2556554433333 2457888866544
No 333
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=28.35 E-value=2.8e+02 Score=23.66 Aligned_cols=98 Identities=12% Similarity=0.099 Sum_probs=48.6
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCC-------CC--Ch------HHHHHHcCCeEEEEEeecCCCCCCC
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPT-------WG--NH------PKVFTLAGLSVKSYRYYDPATRGLN 206 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~-------y~--~~------~~~~~~~G~~~~~v~~~~~~~~~~d 206 (350)
.+++ ..|+++++-... ...+...|..|++.+-. |. .- ...++..|.++..+.. |- -|
T Consensus 11 k~~l--VTGas~gIG~a~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~ 82 (281)
T 3s55_A 11 KTAL--ITGGARGMGRSH-AVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKV-DV----KD 82 (281)
T ss_dssp CEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEEC-CT----TC
T ss_pred CEEE--EeCCCchHHHHH-HHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeC-CC----CC
Confidence 4444 556666663321 12335578777665322 10 01 1123345777777766 32 35
Q ss_pred HHHHHHHhhcC---CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 207 FQGLLEDLGSA---PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 207 ~~~l~~~l~~~---~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
.+.+.+.+++. -.+.-+++++-...+.+ ...+.++|++..+
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 83 RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 66666555431 11122566554433333 3467888887554
No 334
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=28.06 E-value=1.7e+02 Score=25.03 Aligned_cols=102 Identities=14% Similarity=0.021 Sum_probs=46.7
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH----HcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT----LAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-.......+ ..|.++..+.. |-.+ .-+++.+.+.+.+
T Consensus 20 ~k~vl--VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-Dv~~-~~~v~~~~~~~~~ 94 (266)
T 4egf_A 20 GKRAL--ITGATKGIGADI-ARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI-DLAE-PDAPAELARRAAE 94 (266)
T ss_dssp TCEEE--ETTTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC-CTTS-TTHHHHHHHHHHH
T ss_pred CCEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEe-cCCC-HHHHHHHHHHHHH
Confidence 34555 566677773321 12335577777765433222222222 25677777766 4321 1123333333322
Q ss_pred CCCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 217 APAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
.-.+.-+++++-.....+ ...+.++|++..+
T Consensus 95 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 127 (266)
T 4egf_A 95 AFGGLDVLVNNAGISHPQPVVDTDPQLFDATIA 127 (266)
T ss_dssp HHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 111122555544333222 2457888876554
No 335
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=28.02 E-value=35 Score=33.54 Aligned_cols=73 Identities=12% Similarity=0.022 Sum_probs=44.5
Q ss_pred HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCc-EEEEe--c--CCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 186 TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGA-IVLLH--A--CAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 186 ~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~-~~l~~--~--~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
....+++....+.|..+|.+..+.+.+.-+...-+. -.+-. + .-..|.|-.+|++|+++|++.|++++|-||=
T Consensus 165 A~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 242 (543)
T 3rcn_A 165 AMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHITVIP 242 (543)
T ss_dssp HHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCCEEee
Confidence 356777777776666667777665555332110000 00000 0 0123557789999999999999999998884
No 336
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=27.85 E-value=89 Score=27.28 Aligned_cols=49 Identities=16% Similarity=0.062 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 203 RGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
|.+|.-++.++.. ..... ++++.. .++.++++++++.|++.|+-+++|-
T Consensus 109 fi~~~~qi~ea~~-~GAD~-ilLi~a-------~l~~~~l~~l~~~a~~lGl~~lvEv 157 (251)
T 1i4n_A 109 FYIDTVQVKLASS-VGADA-ILIIAR-------ILTAEQIKEIYEAAEELGMDSLVEV 157 (251)
T ss_dssp CCCSTHHHHHHHH-TTCSE-EEEEGG-------GSCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCHHHHHHHHH-cCCCE-EEEecc-------cCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 6777777777433 33333 333322 3677889999999999998888875
No 337
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=27.55 E-value=2.9e+02 Score=23.91 Aligned_cols=97 Identities=11% Similarity=0.089 Sum_probs=44.4
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc--
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-- 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 216 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.++.
T Consensus 35 k~vl--VTGas~gIG~ai-a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 35 KIAL--VTGASYGIGFAI-ASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVC-DV----TDEDGIQAMVAQIE 106 (291)
T ss_dssp CEEE--EETCSSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEEC-CT----TCHHHHHHHHHHHH
T ss_pred CEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEe-cC----CCHHHHHHHHHHHH
Confidence 4444 456666663221 122345677776653221111222 2233556666655 32 356666655543
Q ss_pred -CCCCcEEEEecCCCCCCC--CCCCHHHHHHHH
Q 018820 217 -APAGAIVLLHACAHNPTG--VDPTLQQWERIR 246 (350)
Q Consensus 217 -~~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~ 246 (350)
.-.+.-+++++-...+.+ ...+.++|+++.
T Consensus 107 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 139 (291)
T 3cxt_A 107 SEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVI 139 (291)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGSCHHHHHHHH
T ss_pred HHcCCCcEEEECCCcCCCCCcccCCHHHHHHHH
Confidence 111122555443323322 235778887654
No 338
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=27.40 E-value=40 Score=31.93 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFAS 267 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~ 267 (350)
+.++++++++.|+++|+-||.|-++.....
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 489999999999999999999998865443
No 339
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=27.18 E-value=2.9e+02 Score=23.40 Aligned_cols=99 Identities=11% Similarity=-0.013 Sum_probs=47.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS- 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~- 216 (350)
+++++ ..|+++++-... ...+...|-.|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.+++
T Consensus 11 ~k~vl--VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 11 DKVVV--ISGVGPALGTTL-ARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGT-DI----TDDAQVAHLVDET 82 (264)
T ss_dssp TCEEE--EESCCTTHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHH
T ss_pred CcEEE--EECCCcHHHHHH-HHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEc-CC----CCHHHHHHHHHHH
Confidence 34444 455555652211 123345687777765432222222 2345677777766 32 355666555442
Q ss_pred --CCCCcEEEEecCCCC-CCCC--CCCHHHHHHHHH
Q 018820 217 --APAGAIVLLHACAHN-PTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 217 --~~~~~~~l~~~~p~N-PTG~--~~s~~~~~~i~~ 247 (350)
.-.+.-+++++-... +.+. ..+.++|++..+
T Consensus 83 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 118 (264)
T 3ucx_A 83 MKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIE 118 (264)
T ss_dssp HHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHH
Confidence 111122555543221 2222 567888877654
No 340
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=27.16 E-value=3.1e+02 Score=23.82 Aligned_cols=99 Identities=13% Similarity=0.024 Sum_probs=50.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH---HcC-CeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT---LAG-LSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~G-~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+.+++ ..|+++++-... ...+...|-.|++.+-.-.......+ ..| .++..+.. |- -|.+.+++.++.
T Consensus 41 ~k~vl--VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-Dv----~d~~~v~~~~~~ 112 (293)
T 3rih_A 41 ARSVL--VTGGTKGIGRGI-ATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL-DV----SDPGSCADAART 112 (293)
T ss_dssp TCEEE--ETTTTSHHHHHH-HHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEEC-CT----TCHHHHHHHHHH
T ss_pred CCEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEE-eC----CCHHHHHHHHHH
Confidence 34555 566677773321 12335578777776544334444333 233 46666665 32 356665555443
Q ss_pred C---CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 217 A---PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 217 ~---~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
. -.+.-+++++-...+.+. ..+.++|+++.+
T Consensus 113 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 113 VVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 1 111225565544444333 568888887665
No 341
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=27.15 E-value=2e+02 Score=28.09 Aligned_cols=78 Identities=10% Similarity=-0.019 Sum_probs=49.3
Q ss_pred cCCCEEEEcCCCCCChHH-------HHHHcCCeEEEEEe--ecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCC
Q 018820 166 YHQRTIYIPQPTWGNHPK-------VFTLAGLSVKSYRY--YDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVD 236 (350)
Q Consensus 166 ~~gd~Vlv~~P~y~~~~~-------~~~~~G~~~~~v~~--~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~ 236 (350)
.++|.|++....+++... .+...|++++.... ..- ...-|.+++.+.++.-.++.++.+|..
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~-SgHa~~~eL~~~i~~~~Pk~vipvHGe-------- 407 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHA-SGHASQEELKLILNLTTPRFFLPWHGE-------- 407 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCC-CSSCCHHHHHHHHHHHCCSEEEEESBC--------
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEE-eCCCCHHHHHHHHHhcCCCEEEEEcCC--------
Confidence 678999999888877632 23467888764320 011 234677888877765444555666532
Q ss_pred CCHHHHHHHHHHHHhcCc
Q 018820 237 PTLQQWERIRQLMRSKGL 254 (350)
Q Consensus 237 ~s~~~~~~i~~~~~~~~~ 254 (350)
...+.++++++++.|+
T Consensus 408 --~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 408 --VRHQMNFKWLAESMSR 423 (562)
T ss_dssp --HHHHHHHHHHHHTSSS
T ss_pred --HHHHHHHHHHHHHcCC
Confidence 4566777888887664
No 342
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=27.01 E-value=37 Score=31.53 Aligned_cols=69 Identities=14% Similarity=0.170 Sum_probs=39.6
Q ss_pred HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 185 FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 185 ~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
+...++++....+.|..+|.+....+-+..... ..+ ..- + ..+.+-.+|++|+++|++.|+++++-||=
T Consensus 42 mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g--~~~--~-~~~~~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 42 ISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDG--IYI--N-PYTGKPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp HHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTS--CEE--C-TTTCCEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCC--CcC--C-CCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 345677777777755556666543221110000 001 110 1 12223469999999999999999988873
No 343
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=26.81 E-value=40 Score=35.88 Aligned_cols=28 Identities=14% Similarity=0.394 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 239 LQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 239 ~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
.++++++++.|+++|+-||.|-+|..+.
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 6999999999999999999999986554
No 344
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=26.70 E-value=44 Score=32.16 Aligned_cols=29 Identities=7% Similarity=0.090 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-+|.-..
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHts 106 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHTS 106 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCCc
Confidence 58999999999999999999999986543
No 345
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=26.60 E-value=2.7e+02 Score=22.98 Aligned_cols=93 Identities=8% Similarity=-0.022 Sum_probs=42.0
Q ss_pred cCCchhHHHH-HHHHHHHhcCCCEEEEcCCCCCChHHHHHH----cCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CC
Q 018820 148 CLSGTGSLRV-GAEFLARHYHQRTIYIPQPTWGNHPKVFTL----AGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PA 219 (350)
Q Consensus 148 t~G~~~al~l-~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~ 219 (350)
..|+++++-. ++. .+...|..|++.+-.-.......+. .+.++..+.. |- -|.+.+.+.++.. -.
T Consensus 7 ItGasggiG~~~a~--~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 7 VTGASSGNGLAIAT--RFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRA-DV----ADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp EETTTSHHHHHHHH--HHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEEC-CT----TCHHHHHHHHHHHHHHHS
T ss_pred EeCCCchHHHHHHH--HHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEe-cC----CCHHHHHHHHHHHHHHhC
Confidence 4566666622 222 2345676676654322222222222 2455666655 32 3566666655421 01
Q ss_pred CcEEEEecCCCCCCCC-----CCCHHHHHHHHH
Q 018820 220 GAIVLLHACAHNPTGV-----DPTLQQWERIRQ 247 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~-----~~s~~~~~~i~~ 247 (350)
+.-+++++-...+.+. ..+.++|++..+
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA 112 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence 1125565443322221 346677765443
No 346
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=26.56 E-value=38 Score=24.33 Aligned_cols=22 Identities=14% Similarity=-0.091 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhcCcEEEEcc
Q 018820 239 LQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 239 ~~~~~~i~~~~~~~~~~ii~De 260 (350)
.+.-++|.++|+++|+.+++|.
T Consensus 26 ~~~A~~I~~~A~e~~VPi~e~~ 47 (83)
T 3bzy_B 26 DAKALQIIKLAELYDIPVIEDI 47 (83)
T ss_dssp THHHHHHHHHHHHTTCCEEECH
T ss_pred cHHHHHHHHHHHHcCCCEEeCH
Confidence 3456889999999999999985
No 347
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=26.54 E-value=3.4e+02 Score=24.05 Aligned_cols=11 Identities=9% Similarity=0.238 Sum_probs=9.4
Q ss_pred CEEEEcCCCCC
Q 018820 169 RTIYIPQPTWG 179 (350)
Q Consensus 169 d~Vlv~~P~y~ 179 (350)
|.|++..|.|.
T Consensus 111 davlv~~P~y~ 121 (307)
T 3s5o_A 111 DAAMVVTPCYY 121 (307)
T ss_dssp SEEEEECCCTT
T ss_pred CEEEEcCCCcC
Confidence 88999889885
No 348
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=26.44 E-value=2.8e+02 Score=23.07 Aligned_cols=99 Identities=11% Similarity=0.010 Sum_probs=47.0
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF---TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
+.+++ ..|+++++-... ...+...|-.|++.+-.-....... +..+.++..+.. |- -|.+.+.+.++..
T Consensus 9 ~k~vl--ITGas~giG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 9 NKVGI--VTGSGGGIGQAY-AEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV-DV----SDPESAKAMADRT 80 (253)
T ss_dssp TCEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEC-CT----TSHHHHHHHHHHH
T ss_pred CCEEE--EECCCChHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEc-cC----CCHHHHHHHHHHH
Confidence 34444 556666663221 1233456777776554322222222 234667777766 32 3566666555421
Q ss_pred ---CCCcEEEEecCCC---CCCC--CCCCHHHHHHHHH
Q 018820 218 ---PAGAIVLLHACAH---NPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ---~~~~~~l~~~~p~---NPTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-.- .+.+ ...+.++|++..+
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 118 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMS 118 (253)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHh
Confidence 1112255544322 1111 2467888776543
No 349
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=26.25 E-value=47 Score=31.27 Aligned_cols=30 Identities=7% Similarity=0.175 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFAS 267 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~ 267 (350)
+.++++++++.|+++|+-||.|-++.....
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 97 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHTGF 97 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCcccC
Confidence 489999999999999999999999876653
No 350
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=26.14 E-value=3.1e+02 Score=23.51 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=47.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCC-ChHHHHH----HcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWG-NHPKVFT----LAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~-~~~~~~~----~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
++++ ..|+++++-... ...+...|..|++.+-.-. ......+ ..+.++..+.. |- -|.+.+.+.++.
T Consensus 26 k~~l--VTGas~GIG~~i-a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~d~~~v~~~~~~ 97 (281)
T 3v2h_A 26 KTAV--ITGSTSGIGLAI-ARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPA-DM----TKPSEIADMMAM 97 (281)
T ss_dssp CEEE--EETCSSHHHHHH-HHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECC-CT----TCHHHHHHHHHH
T ss_pred CEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeC-CC----CCHHHHHHHHHH
Confidence 4444 556666663321 1233567877777543211 1122221 12556666655 32 356666655542
Q ss_pred ---CCCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 217 ---APAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 217 ---~~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
.-.+.-+++++-...+.+. ..+.++|+++.+
T Consensus 98 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 98 VADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp HHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 1111225565544433333 347888877654
No 351
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=25.85 E-value=3.2e+02 Score=23.49 Aligned_cols=99 Identities=8% Similarity=0.037 Sum_probs=50.8
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCC-------Ch---HHHHHHcCCeEEEEEeecCCCCCCCHHHH
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWG-------NH---PKVFTLAGLSVKSYRYYDPATRGLNFQGL 210 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~-------~~---~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 210 (350)
+++++ ..|+++++-... ...+...|..|++..-.-. .. ...++..|.++..+.. |- -|.+.+
T Consensus 9 ~k~vl--VTGas~GIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v 80 (285)
T 3sc4_A 9 GKTMF--ISGGSRGIGLAI-AKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVG-DI----RDGDAV 80 (285)
T ss_dssp TCEEE--EESCSSHHHHHH-HHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEEC-CT----TSHHHH
T ss_pred CCEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEEC-CC----CCHHHH
Confidence 34444 556666663321 1234567877776543322 11 2233455778888776 32 356666
Q ss_pred HHHhhcC---CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 211 LEDLGSA---PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 211 ~~~l~~~---~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
.+.+++. -.+.-+++++-...+.+. ..+.++|+++.+
T Consensus 81 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 81 AAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5554431 111225665544333332 467888887655
No 352
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=25.66 E-value=2.8e+02 Score=23.00 Aligned_cols=91 Identities=5% Similarity=-0.050 Sum_probs=40.5
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEec
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHA 227 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~ 227 (350)
..|+++++-... ...+...|..|++..-.-.......+..+.++..+.. | --|.+.+.+.+++..+-. +++++
T Consensus 19 VTGas~gIG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D----~~~~~~~~~~~~~~~~id-~li~~ 91 (249)
T 3f9i_A 19 ITGASSGIGSAI-ARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVC-N----LANKEECSNLISKTSNLD-ILVCN 91 (249)
T ss_dssp ETTTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEEC-C----TTSHHHHHHHHHTCSCCS-EEEEC
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEc-C----CCCHHHHHHHHHhcCCCC-EEEEC
Confidence 556666763221 1233456777777654333333444444445544444 2 246777887776542222 55554
Q ss_pred CCCCCCC--CCCCHHHHHHH
Q 018820 228 CAHNPTG--VDPTLQQWERI 245 (350)
Q Consensus 228 ~p~NPTG--~~~s~~~~~~i 245 (350)
-...+.+ ...+.++|++.
T Consensus 92 Ag~~~~~~~~~~~~~~~~~~ 111 (249)
T 3f9i_A 92 AGITSDTLAIRMKDQDFDKV 111 (249)
T ss_dssp CC-------------CHHHH
T ss_pred CCCCCCCccccCCHHHHHHH
Confidence 4332222 22445555543
No 353
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=25.62 E-value=59 Score=28.52 Aligned_cols=69 Identities=16% Similarity=0.083 Sum_probs=39.2
Q ss_pred CCeEEEEEeecCCCCCCCHHHHHHHhhcC-CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE
Q 018820 189 GLSVKSYRYYDPATRGLNFQGLLEDLGSA-PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF 258 (350)
Q Consensus 189 G~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~ 258 (350)
++++..++.+..+....+...+.+.++.. ..+..++- .+-..++........+++.++.+.++++++|.
T Consensus 73 ~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin-~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~ 142 (282)
T 3zxy_A 73 QCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIIN-ISGGELTDFGEADGWLENAVSLCRQNNVLLVA 142 (282)
T ss_dssp TSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEE-ECCCEEESSSCCCHHHHHHHHHHHHTTCEEEE
T ss_pred ccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEe-ccCccccccccccHHHHHHHHHHhhcCceEEE
Confidence 46777787755444455655555444321 01111333 33344444444456677888888999998886
No 354
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=25.61 E-value=70 Score=29.26 Aligned_cols=79 Identities=13% Similarity=0.100 Sum_probs=44.3
Q ss_pred CCCCChHHHHHHc-CCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCc
Q 018820 176 PTWGNHPKVFTLA-GLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGL 254 (350)
Q Consensus 176 P~y~~~~~~~~~~-G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~ 254 (350)
|.|.....+.... ++++.-+-. .+ ..-.+.+.+++.++.-+ .+++++. | ++.++.+++.++|+++++
T Consensus 65 pvy~sv~ea~~~~p~~DlaVi~v-p~---~~a~~ai~ea~~~~Gv~-~vViiT~-----G--~~e~~~~~l~~~a~~~g~ 132 (334)
T 3mwd_B 65 PVFKNMADAMRKHPEVDVLINFA-SL---RSAYDSTMETMNYAQIR-TIAIIAE-----G--IPEALTRKLIKKADQKGV 132 (334)
T ss_dssp EEESSHHHHHHHCTTCCEEEECC-CT---TTHHHHHHHHTTSTTCC-EEEECCS-----C--CCHHHHHHHHHHHHHHTC
T ss_pred eeeCCHHHHhhcCCCCcEEEEec-CH---HHHHHHHHHHHHHCCCC-EEEEECC-----C--CCHHHHHHHHHHHHHcCC
Confidence 5555555555543 233332211 11 11246667777644332 2444432 2 445788899999999999
Q ss_pred EEEEccCCCCCC
Q 018820 255 LPFFDSAYQGFA 266 (350)
Q Consensus 255 ~ii~DeaY~~~~ 266 (350)
.+|==++..-+.
T Consensus 133 rliGPNc~Gii~ 144 (334)
T 3mwd_B 133 TIIGPATVGGIK 144 (334)
T ss_dssp EEECSSCCCEEE
T ss_pred EEEccCCccccC
Confidence 998777664443
No 355
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=25.50 E-value=3e+02 Score=23.11 Aligned_cols=94 Identities=11% Similarity=0.098 Sum_probs=42.4
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH---c-CCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCC
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL---A-GLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAG 220 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~---~-G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~ 220 (350)
..|+++++-... ...+...|..|++.+-.-.......+. . |.++..+.. |- -|.+.+.+.++.. -.+
T Consensus 12 VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 12 ITGSSSGIGLAI-AEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV-DV----ATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp EESCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC-CT----TSHHHHHHHHHHHHHHHSS
T ss_pred EECCCchHHHHH-HHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEc-CC----CCHHHHHHHHHHHHHHcCC
Confidence 456666662211 122345677776653221111222221 1 666766665 32 3566666555421 011
Q ss_pred cEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 221 AIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 221 ~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
.-+++++-...+.+ ...+.++|++..+
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 86 ADILVNNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 11555544322222 2357787765443
No 356
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=25.30 E-value=2.2e+02 Score=26.49 Aligned_cols=16 Identities=6% Similarity=0.042 Sum_probs=9.3
Q ss_pred ChhHHHHHHHHHHHhh
Q 018820 313 TADVAGRVESQVKLVI 328 (350)
Q Consensus 313 ~~~~~~~~~~~l~~~~ 328 (350)
+++.+.++++.++.+.
T Consensus 265 ~P~ef~~lv~~ir~i~ 280 (385)
T 1vli_A 265 NPDELKEMVDGIRKTE 280 (385)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 3555666666665544
No 357
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=25.13 E-value=2.9e+02 Score=22.84 Aligned_cols=93 Identities=9% Similarity=0.066 Sum_probs=42.2
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeE-EEEEeecCCCCCCCHHHHHHHhhcC--CCCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSV-KSYRYYDPATRGLNFQGLLEDLGSA--PAGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~-~~v~~~~~~~~~~d~~~l~~~l~~~--~~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+..+.++ ..+.. |- -|.+.+++.++.. -.+.-++
T Consensus 16 ITGasggiG~~l-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~~~~~id~l 89 (254)
T 2wsb_A 16 VTGAGSGIGLEI-CRAFAASGARLILIDREAAALDRAAQELGAAVAARIVA-DV----TDAEAMTAAAAEAEAVAPVSIL 89 (254)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEEC-CT----TCHHHHHHHHHHHHHHSCCCEE
T ss_pred EECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEE-ec----CCHHHHHHHHHHHHhhCCCcEE
Confidence 456666762211 12234567777665432222223333334455 45544 32 3666666655421 0112255
Q ss_pred EecCCCCCCC--CCCCHHHHHHHH
Q 018820 225 LHACAHNPTG--VDPTLQQWERIR 246 (350)
Q Consensus 225 ~~~~p~NPTG--~~~s~~~~~~i~ 246 (350)
+++-...+.+ ...+.++|++..
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~ 113 (254)
T 2wsb_A 90 VNSAGIARLHDALETDDATWRQVM 113 (254)
T ss_dssp EECCCCCCCBCSTTCCHHHHHHHH
T ss_pred EECCccCCCCCcccCCHHHHHHHH
Confidence 6554333222 335677766543
No 358
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=25.08 E-value=52 Score=30.66 Aligned_cols=29 Identities=10% Similarity=0.129 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 58999999999999999999998886544
No 359
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=24.89 E-value=51 Score=31.41 Aligned_cols=29 Identities=21% Similarity=0.112 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 48999999999999999999999887554
No 360
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=24.85 E-value=3.1e+02 Score=23.04 Aligned_cols=98 Identities=12% Similarity=0.081 Sum_probs=48.2
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHH---HHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC-
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVF---TLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA- 217 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~---~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~- 217 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-....... +..|.++..+.. |- -|.+.+.+.++..
T Consensus 7 k~vl--VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~ 78 (257)
T 3imf_A 7 KVVI--ITGGSSGMGKGM-ATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQM-DV----RNTDDIQKMIEQID 78 (257)
T ss_dssp CEEE--ETTTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEEC-CT----TCHHHHHHHHHHHH
T ss_pred CEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEc-cC----CCHHHHHHHHHHHH
Confidence 4444 566667773321 1233557877776543322222222 234556777766 32 3556665554431
Q ss_pred --CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 218 --PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 --~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+.+ ...+.++|++..+
T Consensus 79 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (257)
T 3imf_A 79 EKFGRIDILINNAAGNFICPAEDLSVNGWNSVIN 112 (257)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 11122555544333222 2467888877655
No 361
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=24.71 E-value=1.3e+02 Score=28.17 Aligned_cols=29 Identities=21% Similarity=0.297 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHhcCcEEEEccCCCCC
Q 018820 237 PTLQQWERIRQLMRSKGLLPFFDSAYQGF 265 (350)
Q Consensus 237 ~s~~~~~~i~~~~~~~~~~ii~DeaY~~~ 265 (350)
.+.+.+.++++.|+++|+-|+.|--|.++
T Consensus 86 ~d~~~~~~~a~~Ak~~GLkVlldfHysD~ 114 (399)
T 1ur4_A 86 NDLEKAIQIGKRATANGMKLLADFHYSDF 114 (399)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSSSS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeccCCc
Confidence 56899999999999999999999888765
No 362
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.67 E-value=3.2e+02 Score=23.13 Aligned_cols=66 Identities=12% Similarity=-0.021 Sum_probs=30.7
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH------cCCeEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL------AGLSVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~------~G~~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-.......+. .+.++..+.. |- -|.+.+.+.++
T Consensus 7 k~vl--VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~ 78 (278)
T 1spx_A 7 KVAI--ITGSSNGIGRAT-AVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVA-DV----TTDAGQDEILS 78 (278)
T ss_dssp CEEE--ETTTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEEC-CT----TSHHHHHHHHH
T ss_pred CEEE--EeCCCchHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEec-cc----CCHHHHHHHHH
Confidence 3444 566777773321 122345677776653221112222221 2345666655 32 35666666554
No 363
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=24.61 E-value=3e+02 Score=22.84 Aligned_cols=94 Identities=7% Similarity=0.088 Sum_probs=44.1
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCC-CCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCC
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQP-TWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAG 220 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P-~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~ 220 (350)
..|+++++-... ...+...|..|++..- .-...... ++..|.++..+.. |- -|.+.+.+.++.. -.+
T Consensus 9 VTGas~giG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 9 VTGASRGIGRAI-AIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA-DV----ANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp ETTCSSHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHHHHHHSC
T ss_pred EECCCcHHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEc-CC----CCHHHHHHHHHHHHHHcCC
Confidence 556777773321 1223456777766432 21111222 2234666766665 32 3566666655431 011
Q ss_pred cEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 221 AIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
.-+++++-...+.+. ..+.++|++..+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 125565443333331 357777766443
No 364
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=24.46 E-value=3.4e+02 Score=23.33 Aligned_cols=99 Identities=12% Similarity=-0.002 Sum_probs=48.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH---HcCCeEEEEEeecCCCCCCCHHHHHHHhhcC
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT---LAGLSVKSYRYYDPATRGLNFQGLLEDLGSA 217 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 217 (350)
+.+++ ..|+++++-... ...+...|-.|++.+-.-........ ..|.++..+.. |- -|.+.+.+.+++.
T Consensus 28 ~k~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dv----~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 28 SPVAL--ITGAGSGIGRAT-ALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA-DV----SDELQMRNAVRDL 99 (283)
T ss_dssp CCEEE--EESCSSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEEC-CT----TCHHHHHHHHHHH
T ss_pred CCEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEc-cC----CCHHHHHHHHHHH
Confidence 34555 556666663321 12335578777765533222222222 34667777766 32 3566666555431
Q ss_pred ---CCCcEEEEecCCCCCC-C--CCCCHHHHHHHHH
Q 018820 218 ---PAGAIVLLHACAHNPT-G--VDPTLQQWERIRQ 247 (350)
Q Consensus 218 ---~~~~~~l~~~~p~NPT-G--~~~s~~~~~~i~~ 247 (350)
-.+.-+++++-...+. + ...+.++|++..+
T Consensus 100 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred HHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 1112255554433211 2 2567888876554
No 365
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=24.21 E-value=56 Score=31.22 Aligned_cols=29 Identities=14% Similarity=0.321 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 48999999999999999999999886654
No 366
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=24.17 E-value=54 Score=31.14 Aligned_cols=29 Identities=7% Similarity=0.217 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 37999999999999999999999887655
No 367
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.17 E-value=54 Score=31.29 Aligned_cols=29 Identities=14% Similarity=0.070 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 48999999999999999999999886554
No 368
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=23.97 E-value=54 Score=31.27 Aligned_cols=29 Identities=14% Similarity=0.139 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 109 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVMNHKG 109 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccC
Confidence 48999999999999999999999886553
No 369
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=23.77 E-value=2.9e+02 Score=23.12 Aligned_cols=66 Identities=9% Similarity=-0.089 Sum_probs=31.8
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhc---CCCEEEEcCCCCCChHHHHHHc-----CCeEEEEEeecCCCCCCCHHHHHHH
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHY---HQRTIYIPQPTWGNHPKVFTLA-----GLSVKSYRYYDPATRGLNFQGLLED 213 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~---~gd~Vlv~~P~y~~~~~~~~~~-----G~~~~~v~~~~~~~~~~d~~~l~~~ 213 (350)
.+++ ..|+++++-... ...+.. .|..|++.+-.-.......+.. |.++..+.. |- -|.+.+.+.
T Consensus 7 k~~l--VTGas~gIG~~i-a~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~-Dv----~~~~~v~~~ 78 (259)
T 1oaa_A 7 AVCV--LTGASRGFGRAL-APQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA-DL----GTEAGVQRL 78 (259)
T ss_dssp EEEE--ESSCSSHHHHHH-HHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEEC-CT----TSHHHHHHH
T ss_pred cEEE--EeCCCChHHHHH-HHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEec-CC----CCHHHHHHH
Confidence 4444 556667773321 112344 6877776543222222222221 667777766 32 355555555
Q ss_pred hh
Q 018820 214 LG 215 (350)
Q Consensus 214 l~ 215 (350)
++
T Consensus 79 ~~ 80 (259)
T 1oaa_A 79 LS 80 (259)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 370
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=23.42 E-value=5e+02 Score=24.90 Aligned_cols=101 Identities=9% Similarity=0.029 Sum_probs=54.2
Q ss_pred ccCCcEEEEecCCchhHHHH-HHHHHHHhcCC-CEEEEc-CCCC-------------CC---hHHHHHHcCCeEEEEEee
Q 018820 138 IRENRVTTVQCLSGTGSLRV-GAEFLARHYHQ-RTIYIP-QPTW-------------GN---HPKVFTLAGLSVKSYRYY 198 (350)
Q Consensus 138 ~~~~~v~~~~t~G~~~al~l-~~~l~~~~~~g-d~Vlv~-~P~y-------------~~---~~~~~~~~G~~~~~v~~~ 198 (350)
+.++.+++ ..|+++++-. ++..+ ...| ..|++. .-.- .. ...-++..|.++..+.+
T Consensus 248 ~~~~~~vL--ITGgsgGIG~~lA~~L--a~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~- 322 (525)
T 3qp9_A 248 WQADGTVL--VTGAEEPAAAEAARRL--ARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTC- 322 (525)
T ss_dssp SCTTSEEE--ESSTTSHHHHHHHHHH--HHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEEC-
T ss_pred ecCCCEEE--EECCCCcHHHHHHHHH--HHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEEC-
Confidence 45667777 7888888833 22222 3345 334443 2221 11 22234456888888877
Q ss_pred cCCCCCCCHHHHHHHhhcCC--CCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 199 DPATRGLNFQGLLEDLGSAP--AGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~~~--~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
|- -|.+.+.+.++... .+.-+|+|+-.-...+. ..+.++++++.+
T Consensus 323 Dv----td~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~ 371 (525)
T 3qp9_A 323 DL----TDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVT 371 (525)
T ss_dssp CT----TSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CC----CCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHH
Confidence 42 46778887776532 22335555443333332 467888876654
No 371
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=23.40 E-value=3.4e+02 Score=22.95 Aligned_cols=97 Identities=10% Similarity=0.042 Sum_probs=47.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH---Hc--CCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT---LA--GLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~--G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
++++ ..|+++++-... ...+...|-.|++.+-.-.......+ .. +..+..+.. |- -|.+.+.+.+++
T Consensus 11 k~~l--VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~ 82 (267)
T 3t4x_A 11 KTAL--VTGSTAGIGKAI-ATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVA-DL----GTEQGCQDVIEK 82 (267)
T ss_dssp CEEE--ETTCSSHHHHHH-HHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEEC-CT----TSHHHHHHHHHH
T ss_pred CEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEec-CC----CCHHHHHHHHHh
Confidence 4444 556666663321 12334578777765433222222222 11 455656555 32 356777776665
Q ss_pred CCCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 217 APAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 217 ~~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
..+-. +++++-.....+ ...+.++|++..+
T Consensus 83 ~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 83 YPKVD-ILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp CCCCS-EEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred cCCCC-EEEECCCCCCCCccccCCHHHHHHHHH
Confidence 43222 555544333222 2456788766554
No 372
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=23.38 E-value=56 Score=31.54 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 58999999999999999999999886654
No 373
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=23.09 E-value=3.1e+02 Score=22.91 Aligned_cols=81 Identities=11% Similarity=0.129 Sum_probs=44.1
Q ss_pred CCCCHHHHHHHhhcCC-CCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEEE-ccCCCCCCCCCCCCchHHHHHH
Q 018820 203 RGLNFQGLLEDLGSAP-AGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPFF-DSAYQGFASGSLDSDAQSVRMF 280 (350)
Q Consensus 203 ~~~d~~~l~~~l~~~~-~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii~-DeaY~~~~~~~~~~~~~~~~~~ 280 (350)
.+.+++.+.+.++... ...++.+++++.+|-| .+.|+++|+.++. +- ..+.... +-+......+
T Consensus 10 ~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~-----------~~~A~~~gIp~~~~~~--~~~~~r~-~~~~~~~~~l 75 (209)
T 1meo_A 10 TGSNLQALIDSTREPNSSAQIDIVISNKAAVAG-----------LDKAERAGIPTRVINH--KLYKNRV-EFDSAIDLVL 75 (209)
T ss_dssp SCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHH-----------HHHHHHTTCCEEECCG--GGSSSHH-HHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCCCCcEEEEEEeCCCChHH-----------HHHHHHcCCCEEEECc--cccCchh-hhhHHHHHHH
Confidence 4568888888776542 2345667777666654 4778899987763 21 0111000 0001112223
Q ss_pred hhcCCcEEEEecccccc
Q 018820 281 VADGGECFIAQSYAKNL 297 (350)
Q Consensus 281 ~~~~~~vi~~~S~SK~~ 297 (350)
......+|++-+|.+.+
T Consensus 76 ~~~~~Dliv~a~y~~il 92 (209)
T 1meo_A 76 EEFSIDIVCLAGFMRIL 92 (209)
T ss_dssp HHTTCCEEEEESCCSCC
T ss_pred HhcCCCEEEEcchhhhC
Confidence 33445788888887654
No 374
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=23.08 E-value=4.3e+02 Score=24.06 Aligned_cols=130 Identities=15% Similarity=0.186 Sum_probs=59.4
Q ss_pred CCCcHHHHHHHHHHHhC-CCCCCccCCcEEEEecCCchhHHHHHHHHHHHh-cCC-CEEEEcCCCCCChHHHHHHcCCeE
Q 018820 116 IVGLAEFNKLSAKLILG-ADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH-YHQ-RTIYIPQPTWGNHPKVFTLAGLSV 192 (350)
Q Consensus 116 ~~G~~~lr~aia~~~~g-~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~-~~g-d~Vlv~~P~y~~~~~~~~~~G~~~ 192 (350)
..|.+.|=.. ++ -..+ ..+++++....+++=-.++..+...+ ..| ..+++... .......++..|...
T Consensus 56 ~TG~~~LD~~-----Lg~GGl~---~G~li~I~G~pGsGKTtlal~la~~~~~~g~~vlyi~~E-~s~~~~~a~~~g~d~ 126 (366)
T 1xp8_A 56 STGSLSLDLA-----LGVGGIP---RGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAE-HALDPVYARALGVNT 126 (366)
T ss_dssp CCSCHHHHHH-----TSSSSEE---TTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESS-CCCCHHHHHHTTCCG
T ss_pred cCCCHHHHHH-----hCCCCcc---CCcEEEEEcCCCCChHHHHHHHHHHHHHCCCeEEEEECC-CChhHHHHHHcCCCH
Confidence 4588776433 34 2333 66777765655554444433333222 234 44455433 222223455667653
Q ss_pred EEEEeecCCCCCCCHHHHHHHhhc--CCCCcEEEEecCCCCCCC-CCCC---------------HHHHHHHHHHHHhcCc
Q 018820 193 KSYRYYDPATRGLNFQGLLEDLGS--APAGAIVLLHACAHNPTG-VDPT---------------LQQWERIRQLMRSKGL 254 (350)
Q Consensus 193 ~~v~~~~~~~~~~d~~~l~~~l~~--~~~~~~~l~~~~p~NPTG-~~~s---------------~~~~~~i~~~~~~~~~ 254 (350)
..+.+.++ .+.+.+.+.++. ...+..+|++-+...-.. ..+. .+.+++|..+++++++
T Consensus 127 ~~l~i~~~----~~~e~~l~~l~~l~~~~~~~lVVIDsl~~l~~~~e~~g~~gd~~~~~~~r~~~~~lr~L~~~a~~~~~ 202 (366)
T 1xp8_A 127 DELLVSQP----DNGEQALEIMELLVRSGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGT 202 (366)
T ss_dssp GGCEEECC----SSHHHHHHHHHHHHTTTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHceeecC----CcHHHHHHHHHHHHhcCCCCEEEEeChHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCC
Confidence 32223233 245555444432 111222666655544331 1110 1234555666778887
Q ss_pred EEEE
Q 018820 255 LPFF 258 (350)
Q Consensus 255 ~ii~ 258 (350)
.+|+
T Consensus 203 ~VI~ 206 (366)
T 1xp8_A 203 AAIF 206 (366)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 375
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=22.99 E-value=50 Score=31.49 Aligned_cols=30 Identities=7% Similarity=0.195 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFAS 267 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~ 267 (350)
+.++++++++.|+++|+-||.|-++-....
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 489999999999999999999998865543
No 376
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=22.91 E-value=3e+02 Score=24.51 Aligned_cols=46 Identities=7% Similarity=-0.083 Sum_probs=28.9
Q ss_pred CCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 167 HQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 167 ~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
++..+++.-|. |...++.+|++.+.+.- ...+..+....+.+.++.
T Consensus 189 ~~~~~v~~H~a---f~Yfa~~yGl~~~~~~~-~~~~~eps~~~l~~l~~~ 234 (312)
T 2o1e_A 189 EKKEFITQHTA---FGYLAKEYGLKQVPIAG-LSPDQEPSAASLAKLKTY 234 (312)
T ss_dssp SCCEEEESSCT---THHHHHHTTCEEEECSS-CCSSSCCCHHHHHHHHHH
T ss_pred CCCEEEEECCc---hHHHHHHCCCeEEEeec-cCCCCCCCHHHHHHHHHH
Confidence 56788887776 45567889998766432 111234666666666554
No 377
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=22.90 E-value=1.8e+02 Score=26.11 Aligned_cols=68 Identities=16% Similarity=0.161 Sum_probs=32.6
Q ss_pred CCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 178 WGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 178 y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
|..+..++....++++.+-. .. ....+...++++.... + +. -.|. ..+.++.++|+++|+++++.+.
T Consensus 56 ~~~~~~ll~~~~vD~V~i~t-p~---~~H~~~~~~al~aGkh---V-~~---EKPl--a~~~~e~~~l~~~a~~~g~~~~ 122 (352)
T 3kux_A 56 VSDPQMLFNDPSIDLIVIPT-PN---DTHFPLAQSALAAGKH---V-VV---DKPF--TVTLSQANALKEHADDAGLLLS 122 (352)
T ss_dssp ESCHHHHHHCSSCCEEEECS-CT---TTHHHHHHHHHHTTCE---E-EE---CSSC--CSCHHHHHHHHHHHHHTTCCEE
T ss_pred ECCHHHHhcCCCCCEEEEeC-Ch---HHHHHHHHHHHHCCCc---E-EE---ECCC--cCCHHHHHHHHHHHHHcCCeEE
Confidence 44555555554455555433 11 1234444444443211 2 22 3332 2456666666666666666555
Q ss_pred E
Q 018820 258 F 258 (350)
Q Consensus 258 ~ 258 (350)
+
T Consensus 123 v 123 (352)
T 3kux_A 123 V 123 (352)
T ss_dssp E
T ss_pred E
Confidence 4
No 378
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=22.83 E-value=2.2e+02 Score=25.21 Aligned_cols=71 Identities=11% Similarity=0.134 Sum_probs=38.5
Q ss_pred CCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEE
Q 018820 177 TWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLP 256 (350)
Q Consensus 177 ~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~i 256 (350)
.|..+..++....++++.+-. .. ..-.+...++++.... +++ -.|.+ .+.++.++|++.|+++++.+
T Consensus 55 ~~~~~~~ll~~~~~D~V~i~t-p~---~~h~~~~~~al~~gk~---vl~----EKP~~--~~~~e~~~l~~~a~~~g~~~ 121 (330)
T 3e9m_A 55 AYGSYEELCKDETIDIIYIPT-YN---QGHYSAAKLALSQGKP---VLL----EKPFT--LNAAEAEELFAIAQEQGVFL 121 (330)
T ss_dssp CBSSHHHHHHCTTCSEEEECC-CG---GGHHHHHHHHHHTTCC---EEE----CSSCC--SSHHHHHHHHHHHHHTTCCE
T ss_pred eeCCHHHHhcCCCCCEEEEcC-CC---HHHHHHHHHHHHCCCe---EEE----eCCCC--CCHHHHHHHHHHHHHcCCeE
Confidence 455566666544555555543 11 1234444555544322 332 33433 56777888888888888766
Q ss_pred EEcc
Q 018820 257 FFDS 260 (350)
Q Consensus 257 i~De 260 (350)
.+..
T Consensus 122 ~v~~ 125 (330)
T 3e9m_A 122 MEAQ 125 (330)
T ss_dssp EECC
T ss_pred EEEE
Confidence 6553
No 379
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=22.75 E-value=60 Score=30.89 Aligned_cols=29 Identities=10% Similarity=0.263 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 48999999999999999999999887554
No 380
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=22.68 E-value=61 Score=30.55 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 58999999999999999999998876543
No 381
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=22.61 E-value=57 Score=31.11 Aligned_cols=30 Identities=10% Similarity=0.245 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFAS 267 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~ 267 (350)
+.++++++++.|+++|+-||.|-++.....
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 479999999999999999999999876554
No 382
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=22.28 E-value=3.5e+02 Score=22.75 Aligned_cols=98 Identities=8% Similarity=0.050 Sum_probs=48.3
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEc-CCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc-
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIP-QPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS- 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~-~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~- 216 (350)
.+++ ..|+++++-... ...+...|..|++. ...-...... ++..|.++..+.. |- -|.+.+.+.+++
T Consensus 9 k~vl--VTGas~GIG~ai-a~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~ 80 (259)
T 3edm_A 9 RTIV--VAGAGRDIGRAC-AIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA-DL----TNAAEVEAAISAA 80 (259)
T ss_dssp CEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEEC-CT----TCHHHHHHHHHHH
T ss_pred CEEE--EECCCchHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEc-CC----CCHHHHHHHHHHH
Confidence 4444 556666663221 12334568777765 3332222222 2344667777666 32 356666655543
Q ss_pred --CCCCcEEEEecCCCC-CCC--CCCCHHHHHHHHH
Q 018820 217 --APAGAIVLLHACAHN-PTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 217 --~~~~~~~l~~~~p~N-PTG--~~~s~~~~~~i~~ 247 (350)
.-.+.-+++++-... +.+ ...+.++|++..+
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHH
Confidence 111233555443222 222 2568888887665
No 383
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=22.09 E-value=1.9e+02 Score=25.94 Aligned_cols=72 Identities=10% Similarity=0.113 Sum_probs=43.4
Q ss_pred CCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcE
Q 018820 176 PTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLL 255 (350)
Q Consensus 176 P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ 255 (350)
+.|..+..++....++++.+-. .. ....+...++++.... +++ -.|. ..+.++.++|++.|+++++.
T Consensus 53 ~~~~~~~~~l~~~~~D~V~i~t-p~---~~h~~~~~~al~~gk~---vl~----EKP~--~~~~~~~~~l~~~a~~~~~~ 119 (354)
T 3db2_A 53 AGDATMEALLAREDVEMVIITV-PN---DKHAEVIEQCARSGKH---IYV----EKPI--SVSLDHAQRIDQVIKETGVK 119 (354)
T ss_dssp CCCSSHHHHHHCSSCCEEEECS-CT---TSHHHHHHHHHHTTCE---EEE----ESSS--CSSHHHHHHHHHHHHHHCCC
T ss_pred CCcCCHHHHhcCCCCCEEEEeC-Ch---HHHHHHHHHHHHcCCE---EEE----ccCC--CCCHHHHHHHHHHHHHcCCe
Confidence 3467777777666666666644 21 2335555566654321 332 2343 35678888888888888887
Q ss_pred EEEcc
Q 018820 256 PFFDS 260 (350)
Q Consensus 256 ii~De 260 (350)
+.+..
T Consensus 120 ~~v~~ 124 (354)
T 3db2_A 120 FLCGH 124 (354)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 77654
No 384
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=22.06 E-value=3.6e+02 Score=22.80 Aligned_cols=92 Identities=9% Similarity=-0.054 Sum_probs=41.1
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCc
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGA 221 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~ 221 (350)
..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.++. .-.+.
T Consensus 36 ITGasggIG~~l-a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dl----~~~~~v~~~~~~~~~~~g~i 109 (272)
T 1yb1_A 36 ITGAGHGIGRLT-AYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVV-DC----SNREDIYSSAKKVKAEIGDV 109 (272)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHHHHHTCCC
T ss_pred EECCCchHHHHH-HHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEe-eC----CCHHHHHHHHHHHHHHCCCC
Confidence 456666662211 112345677776654321112222 2233666666665 32 356666655542 11112
Q ss_pred EEEEecCCCCCCCCC--CCHHHHHHH
Q 018820 222 IVLLHACAHNPTGVD--PTLQQWERI 245 (350)
Q Consensus 222 ~~l~~~~p~NPTG~~--~s~~~~~~i 245 (350)
-+++++-...+.+.. .+.++|++.
T Consensus 110 D~li~~Ag~~~~~~~~~~~~~~~~~~ 135 (272)
T 1yb1_A 110 SILVNNAGVVYTSDLFATQDPQIEKT 135 (272)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHH
T ss_pred cEEEECCCcCCCcchhhCCHHHHHHH
Confidence 255655443333322 345555443
No 385
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=21.97 E-value=3.5e+02 Score=22.64 Aligned_cols=94 Identities=12% Similarity=0.063 Sum_probs=43.7
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CC-CC
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---AP-AG 220 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~-~~ 220 (350)
..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.++. .- .+
T Consensus 14 VTGas~giG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~~~~~g~ 87 (260)
T 2ae2_A 14 VTGGSRGIGYGI-VEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVC-DL----SSRSERQELMNTVANHFHGK 87 (260)
T ss_dssp EESCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEEC-CT----TCHHHHHHHHHHHHHHTTTC
T ss_pred EECCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEc-CC----CCHHHHHHHHHHHHHHcCCC
Confidence 456666662211 122345677776653221111222 2233667766665 32 356666655542 11 11
Q ss_pred cEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 221 AIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 221 ~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
.-+++++-...+.+ ...+.++|++..+
T Consensus 88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 88 LNILVNNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22555544333322 2457788876544
No 386
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=21.93 E-value=3.7e+02 Score=22.81 Aligned_cols=98 Identities=11% Similarity=0.013 Sum_probs=46.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc--
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS-- 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 216 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-...... ++..|.++..+.. |- -|.+.+.+.++.
T Consensus 22 k~vl--VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 22 TTAL--VTGGSKGIGYAI-VEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVC-DL----LSRTERDKLMQTVA 93 (273)
T ss_dssp CEEE--EESCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHHH
T ss_pred CEEE--EECCcchHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEC-CC----CCHHHHHHHHHHHH
Confidence 4444 456666663221 122345677776654321112222 2234666766665 32 355666555432
Q ss_pred -CC-CCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 217 -AP-AGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 217 -~~-~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
.- .+.-+++++-...+.+ ...+.++|+++.+
T Consensus 94 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 94 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 11 1222555544333222 2457888876544
No 387
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=21.90 E-value=51 Score=24.19 Aligned_cols=22 Identities=18% Similarity=0.086 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhcCcEEEEcc
Q 018820 239 LQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 239 ~~~~~~i~~~~~~~~~~ii~De 260 (350)
.+.-++|.++|+++|+.|++|.
T Consensus 26 ~~~A~~I~e~A~e~gVPi~e~~ 47 (93)
T 2vt1_B 26 NQCALAVRKYANEVGIPTVRDV 47 (93)
T ss_dssp HHHHHHHHHHHHHTTCCEEECH
T ss_pred cHHHHHHHHHHHHcCCCEEECH
Confidence 4566889999999999999885
No 388
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=21.54 E-value=3.4e+02 Score=22.34 Aligned_cols=93 Identities=12% Similarity=0.096 Sum_probs=41.5
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcC--CeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAG--LSVKSYRYYDPATRGLNFQGLLEDLGS---APAGAI 222 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~ 222 (350)
..|+++++-... ...+...|..|++..-.-.......+... .++..+.. |- -|.+.+.+.++. .-.+.-
T Consensus 11 VtGasggiG~~~-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 11 ITGGTLGIGLAI-ATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQH-DS----SDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp ETTTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEEC-CT----TCHHHHHHHHHHHHHHHSSCC
T ss_pred EeCCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEEC-CC----CCHHHHHHHHHHHHHHhCCCC
Confidence 566777773211 12234567677665422111222222221 24555544 32 355666655543 101112
Q ss_pred EEEecCCCCCCC--CCCCHHHHHHHH
Q 018820 223 VLLHACAHNPTG--VDPTLQQWERIR 246 (350)
Q Consensus 223 ~l~~~~p~NPTG--~~~s~~~~~~i~ 246 (350)
+++++-...+.+ ...+.++|++..
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~ 110 (251)
T 1zk4_A 85 TLVNNAGIAVNKSVEETTTAEWRKLL 110 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHH
Confidence 566554433333 235677776543
No 389
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=21.53 E-value=69 Score=30.07 Aligned_cols=29 Identities=10% Similarity=0.127 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
+.++++++++.|+++|+-||.|-++....
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 48999999999999999999999986554
No 390
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=21.52 E-value=1.2e+02 Score=23.08 Aligned_cols=46 Identities=15% Similarity=0.256 Sum_probs=28.6
Q ss_pred CCHHHHHHHhhc----C----CCCcEEEEecCCCCCCCCCCCHHHHHHHHHHHHhcCcEEE
Q 018820 205 LNFQGLLEDLGS----A----PAGAIVLLHACAHNPTGVDPTLQQWERIRQLMRSKGLLPF 257 (350)
Q Consensus 205 ~d~~~l~~~l~~----~----~~~~~~l~~~~p~NPTG~~~s~~~~~~i~~~~~~~~~~ii 257 (350)
.|++.+.+.+.+ . ...++++-+..-. +..+|.+|.++++++|+.+|
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~-------~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE-------SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC-------SSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC-------ChHHHHHHHHHHHHcCCEEE
Confidence 467777766654 2 2334444333221 12468999999999999987
No 391
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=21.51 E-value=3.7e+02 Score=22.68 Aligned_cols=99 Identities=9% Similarity=0.004 Sum_probs=47.3
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH---H-cCC-eEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT---L-AGL-SVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~-~G~-~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
+.+++ ..|+++++-... ...+...|..|++.+-.-.......+ . .+. ++..+.. |- -|.+.+.+.++
T Consensus 8 ~k~~l--VTGas~GIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~ 79 (265)
T 3lf2_A 8 EAVAV--VTGGSSGIGLAT-VELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVC-DV----LDALQVRAFAE 79 (265)
T ss_dssp TCEEE--EETCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEEC-CT----TCHHHHHHHHH
T ss_pred CCEEE--EeCCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeC-CC----CCHHHHHHHHH
Confidence 34555 556666663221 12334568777776533222222222 1 333 4666665 32 35555555443
Q ss_pred c---CCCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 216 S---APAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 216 ~---~~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
. .-.+.-+++++-...+.+. ..+.++|++..+
T Consensus 80 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (265)
T 3lf2_A 80 ACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQ 116 (265)
T ss_dssp HHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2 1111225665544433332 567888887655
No 392
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=21.49 E-value=3.7e+02 Score=22.65 Aligned_cols=97 Identities=7% Similarity=-0.041 Sum_probs=43.9
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHH---Hc--CCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFT---LA--GLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~---~~--G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-.......+ .. |.++..+.. |- -|.+.+.+.++.
T Consensus 14 k~vl--VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~ 85 (267)
T 1iy8_A 14 RVVL--ITGGGSGLGRAT-AVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA-DV----SDEAQVEAYVTA 85 (267)
T ss_dssp CEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEEC-CT----TSHHHHHHHHHH
T ss_pred CEEE--EECCCCHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEc-cC----CCHHHHHHHHHH
Confidence 3444 456666763221 12234567777665332111222222 11 666766665 32 356666655543
Q ss_pred C---CCCcEEEEecCCCCCC-C--CCCCHHHHHHHH
Q 018820 217 A---PAGAIVLLHACAHNPT-G--VDPTLQQWERIR 246 (350)
Q Consensus 217 ~---~~~~~~l~~~~p~NPT-G--~~~s~~~~~~i~ 246 (350)
. -.+.-+++++-...+. + ...+.++|++..
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 121 (267)
T 1iy8_A 86 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVV 121 (267)
T ss_dssp HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHH
Confidence 1 0111155544332221 1 135678887543
No 393
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=21.46 E-value=76 Score=30.72 Aligned_cols=30 Identities=10% Similarity=0.150 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFAS 267 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~ 267 (350)
+.++++++++.|+++|+-||.|-++.....
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~~ 120 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMNR 120 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcCC
Confidence 489999999999999999999988865543
No 394
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=21.38 E-value=3.7e+02 Score=22.61 Aligned_cols=58 Identities=19% Similarity=0.302 Sum_probs=26.8
Q ss_pred EEEecCCCCCC--CCCCCH---HHHHHHHHHHHhc--CcEEEEccCCCCCCCCCCCCchHHHHHHhhcCCcEEEEec
Q 018820 223 VLLHACAHNPT--GVDPTL---QQWERIRQLMRSK--GLLPFFDSAYQGFASGSLDSDAQSVRMFVADGGECFIAQS 292 (350)
Q Consensus 223 ~l~~~~p~NPT--G~~~s~---~~~~~i~~~~~~~--~~~ii~DeaY~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S 292 (350)
+++. +-||| |....+ +.++++.+...++ ++.|..|= +... + ....+...+...++++|
T Consensus 138 v~~m--sv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~G---GI~~----~---~~~~~~~aGad~vvvGS 202 (230)
T 1tqj_A 138 ILIM--SVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDG---GLKP----N---NTWQVLEAGANAIVAGS 202 (230)
T ss_dssp EEEE--SSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEES---SCCT----T---TTHHHHHHTCCEEEESH
T ss_pred EEEE--EeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEEC---CcCH----H---HHHHHHHcCCCEEEECH
Confidence 4444 45676 655544 3344444444322 67777661 2221 1 22333444566777764
No 395
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=21.38 E-value=3.6e+02 Score=22.54 Aligned_cols=93 Identities=11% Similarity=0.019 Sum_probs=42.2
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC--hHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCC
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN--HPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APA 219 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~--~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~ 219 (350)
..|+++++-... ...+...|..|++.+-.-.. .... ++..|.++..+.. |- -|.+.+.+.+++ .-.
T Consensus 7 VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~~~~~~g 80 (258)
T 3a28_C 7 VTGGAQGIGRGI-SEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGL-DV----TDKANFDSAIDEAAEKLG 80 (258)
T ss_dssp EETTTSHHHHHH-HHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEEC-CT----TCHHHHHHHHHHHHHHHT
T ss_pred EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEc-cC----CCHHHHHHHHHHHHHHhC
Confidence 456666662211 11234457667664322111 1222 2223666766665 32 355666555442 101
Q ss_pred CcEEEEecCCCCCCCC--CCCHHHHHHHH
Q 018820 220 GAIVLLHACAHNPTGV--DPTLQQWERIR 246 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG~--~~s~~~~~~i~ 246 (350)
+.-+++++-...+.+. ..+.++|++..
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 109 (258)
T 3a28_C 81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIY 109 (258)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHH
Confidence 1125555443333332 35778876544
No 396
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=21.20 E-value=65 Score=30.10 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccCCCCCCCC
Q 018820 238 TLQQWERIRQLMRSKGLLPFFDSAYQGFASG 268 (350)
Q Consensus 238 s~~~~~~i~~~~~~~~~~ii~DeaY~~~~~~ 268 (350)
+.++++++++.|+++|+-||.|-++.....+
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~ 103 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTFD 103 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCSC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccCC
Confidence 6899999999999999999999998766543
No 397
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=21.07 E-value=3.9e+02 Score=22.79 Aligned_cols=97 Identities=12% Similarity=0.062 Sum_probs=43.0
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH---cCCeEEEEEeecCCCCCCCHHHHHHHhhc--
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL---AGLSVKSYRYYDPATRGLNFQGLLEDLGS-- 216 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~---~G~~~~~v~~~~~~~~~~d~~~l~~~l~~-- 216 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-.......+. .| ++..+.. | --|.+.+.+.++.
T Consensus 30 k~vl--VTGas~gIG~ai-a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~-D----v~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 30 RIAL--VTGGSRGIGQMI-AQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPA-D----LSSEAGARRLAQALG 100 (276)
T ss_dssp CEEE--EETTTSHHHHHH-HHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCC-C----TTSHHHHHHHHHHHH
T ss_pred CEEE--EeCCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEe-e----CCCHHHHHHHHHHHH
Confidence 4444 456666763221 122345677777654332222222222 23 4544444 2 2356666555542
Q ss_pred -CCCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 217 -APAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 217 -~~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
.-.+.-+++++-.....+ ...+.++|++..+
T Consensus 101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (276)
T 2b4q_A 101 ELSARLDILVNNAGTSWGAALESYPVSGWEKVMQ 134 (276)
T ss_dssp HHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 111122555543332222 2356677765543
No 398
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=20.99 E-value=3.7e+02 Score=22.51 Aligned_cols=91 Identities=11% Similarity=0.098 Sum_probs=40.9
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHc-----CCeEEEEEeecCCCCCCCHHHHHHHhhc---CCC
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLA-----GLSVKSYRYYDPATRGLNFQGLLEDLGS---APA 219 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~-----G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~ 219 (350)
..|+++++-... ...+...|..|++.+-.-.......+.. +.++..+.. |- -|.+.+.+.++. .-.
T Consensus 12 VTGas~gIG~~i-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 12 VTAGSSGLGFAS-ALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG-DI----REPGDIDRLFEKARDLGG 85 (260)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEEC-CT----TCHHHHHHHHHHHHHTTC
T ss_pred EECCCchHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEc-cC----CCHHHHHHHHHHHHHhcC
Confidence 456666662211 1223456777766543211122222211 335666655 32 356666655542 111
Q ss_pred CcEEEEecCCCCCCC--CCCCHHHHHHH
Q 018820 220 GAIVLLHACAHNPTG--VDPTLQQWERI 245 (350)
Q Consensus 220 ~~~~l~~~~p~NPTG--~~~s~~~~~~i 245 (350)
.-+++++-...+.+ ...+.++|++.
T Consensus 86 -id~lv~~Ag~~~~~~~~~~~~~~~~~~ 112 (260)
T 2z1n_A 86 -ADILVYSTGGPRPGRFMELGVEDWDES 112 (260)
T ss_dssp -CSEEEECCCCCCCBCGGGCCHHHHHHH
T ss_pred -CCEEEECCCCCCCCCcccCCHHHHHHH
Confidence 22555544333332 23567777543
No 399
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.93 E-value=4.1e+02 Score=22.98 Aligned_cols=97 Identities=9% Similarity=0.069 Sum_probs=44.5
Q ss_pred cEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHH---HHHcCC---eEEEEEeecCCCCCCCHHHHHHHhh
Q 018820 142 RVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKV---FTLAGL---SVKSYRYYDPATRGLNFQGLLEDLG 215 (350)
Q Consensus 142 ~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~---~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~l~ 215 (350)
.+++ ..|+++++-... ...+...|..|++.+-.-...... +...|. ++..+.. |- -|.+.+.+.++
T Consensus 27 k~vl--VTGas~gIG~ai-a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~-Dv----~d~~~v~~~~~ 98 (297)
T 1xhl_A 27 KSVI--ITGSSNGIGRSA-AVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVA-DV----TEASGQDDIIN 98 (297)
T ss_dssp CEEE--ETTCSSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEEC-CT----TSHHHHHHHHH
T ss_pred CEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEec-CC----CCHHHHHHHHH
Confidence 4444 566677773321 122345677777654321112222 222344 5666655 32 35666665554
Q ss_pred cC---CCCcEEEEecCCCCCCCC----CCCHHHHHHHH
Q 018820 216 SA---PAGAIVLLHACAHNPTGV----DPTLQQWERIR 246 (350)
Q Consensus 216 ~~---~~~~~~l~~~~p~NPTG~----~~s~~~~~~i~ 246 (350)
.. -.+.-+++++-...+.+. ..+.++|++..
T Consensus 99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~ 136 (297)
T 1xhl_A 99 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTF 136 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHH
T ss_pred HHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHH
Confidence 21 011125555443333332 35677776553
No 400
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=20.89 E-value=3.2e+02 Score=22.90 Aligned_cols=94 Identities=12% Similarity=0.065 Sum_probs=45.0
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCC---CCcEEE
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAP---AGAIVL 224 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~l 224 (350)
..|+++++-... ...+...|..|++.+-.-.......+..+.++..+.. | --|.+.+.+.++... .+.-++
T Consensus 5 VTGas~gIG~ai-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D----v~~~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 5 VTGATAGFGECI-TRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQL-D----VRNRAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp ETTTTSTTHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEEC-C----TTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred EECCCChHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEc-C----CCCHHHHHHHHHHHHHhCCCCCEE
Confidence 445666652211 1223456777776543222223333334445666655 3 246777777766421 122255
Q ss_pred EecCCCC-CCC--CCCCHHHHHHHHH
Q 018820 225 LHACAHN-PTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 225 ~~~~p~N-PTG--~~~s~~~~~~i~~ 247 (350)
+++-... +.+ ...+.++|++..+
T Consensus 79 vnnAg~~~~~~~~~~~~~~~~~~~~~ 104 (248)
T 3asu_A 79 VNNAGLALGMEPAHKASVEDWETMID 104 (248)
T ss_dssp EECCCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EECCCcCCCCCchhhCCHHHHHHHHH
Confidence 5443222 112 2457788876554
No 401
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=20.86 E-value=1.7e+02 Score=25.95 Aligned_cols=62 Identities=18% Similarity=0.108 Sum_probs=0.0
Q ss_pred hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCCcEEEEecCCCCC--CCCCCCHHHHHHHHHH
Q 018820 181 HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAGAIVLLHACAHNP--TGVDPTLQQWERIRQL 248 (350)
Q Consensus 181 ~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~~~~l~~~~p~NP--TG~~~s~~~~~~i~~~ 248 (350)
....++..|+.-+-+-. +--+.++-+++.+.++. +...+++++ |+| ||+.++.+.+.+|++.
T Consensus 95 la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~a~~lPiilY----n~P~~tg~~l~~~~~~~La~~ 161 (301)
T 3m5v_A 95 LAKFAKEHGADGILSVA--PYYNKPTQQGLYEHYKAIAQSVDIPVLLY----NVPGRTGCEISTDTIIKLFRD 161 (301)
T ss_dssp HHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHHHHHHHCSSCEEEE----ECHHHHSCCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHHhCCCCEEEE----eCchhhCcCCCHHHHHHHHhc
No 402
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=20.82 E-value=39 Score=26.03 Aligned_cols=24 Identities=8% Similarity=0.091 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHhcCcEEEEcc
Q 018820 237 PTLQQWERIRQLMRSKGLLPFFDS 260 (350)
Q Consensus 237 ~s~~~~~~i~~~~~~~~~~ii~De 260 (350)
++.+.++.|.+.++.++++++.|-
T Consensus 36 i~~~~l~~I~~~~~~r~VIi~TD~ 59 (119)
T 2fcj_A 36 ISDARLEELADELEGYDVYLLADA 59 (119)
T ss_dssp CCHHHHHHHHHHTTTSEEEEECCS
T ss_pred cCHHHHHHHHHHhcCCCEEEEECC
Confidence 789999999999999999999884
No 403
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=20.50 E-value=2.5e+02 Score=25.04 Aligned_cols=51 Identities=8% Similarity=0.130 Sum_probs=35.4
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHh-cCCCEEEEc---CCC
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARH-YHQRTIYIP---QPT 177 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~-~~gd~Vlv~---~P~ 177 (350)
-..++|+.+.+|... .+.|.+|.|.|+-+.=++ .++... ..+|.|+++ +|+
T Consensus 9 t~~elr~~~~~~r~~-------g~~IgfVPTMG~LH~GHl--sLv~~Ar~~~d~vVVSIFVNP~ 63 (287)
T 3q12_A 9 TLPLLRQQIRRWRQE-------GKRIALVPTMGNLHEGHM--TLVDEAKTRADVVVVTIFVNPL 63 (287)
T ss_dssp SHHHHHHHHHHHHHT-------TCCEEEEEECSSCCHHHH--HHHHHHHTTSSEEEEEECCCGG
T ss_pred CHHHHHHHHHHHHHc-------CCeEEEEcCCCcccHHHH--HHHHHHHHhCCEEEEEeccCcc
Confidence 357888888887532 357889999999777777 444433 357877764 674
No 404
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=20.44 E-value=4.6e+02 Score=23.42 Aligned_cols=99 Identities=11% Similarity=0.035 Sum_probs=50.6
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC----------hHHHHHHcCCeEEEEEeecCCCCCCCHHHH
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN----------HPKVFTLAGLSVKSYRYYDPATRGLNFQGL 210 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~----------~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 210 (350)
+++++ ..|+++++-... ...+...|-.|++..-.-.. ....++..|.++..+.. |- -|.+.+
T Consensus 45 gk~vl--VTGas~GIG~ai-a~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~-Dv----~d~~~v 116 (346)
T 3kvo_A 45 GCTVF--ITGASRGIGKAI-ALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIV-DV----RDEQQI 116 (346)
T ss_dssp TCEEE--EETTTSHHHHHH-HHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEEC-CT----TCHHHH
T ss_pred CCEEE--EeCCChHHHHHH-HHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEc-cC----CCHHHH
Confidence 34555 566666763321 12345677777665333221 12334456778877766 32 356666
Q ss_pred HHHhhcC---CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 211 LEDLGSA---PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 211 ~~~l~~~---~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
.+.+++. -.+.-+++++-...+.+ ...+.++|+++.+
T Consensus 117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 6555431 11122555544333222 3467888877654
No 405
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=20.44 E-value=2.7e+02 Score=25.18 Aligned_cols=10 Identities=10% Similarity=0.052 Sum_probs=5.0
Q ss_pred CEEEEcCCCC
Q 018820 169 RTIYIPQPTW 178 (350)
Q Consensus 169 d~Vlv~~P~y 178 (350)
|.|++..|..
T Consensus 85 D~V~i~tp~~ 94 (383)
T 3oqb_A 85 TMFFDAATTQ 94 (383)
T ss_dssp CEEEECSCSS
T ss_pred CEEEECCCch
Confidence 4555555543
No 406
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=20.43 E-value=3.9e+02 Score=22.56 Aligned_cols=94 Identities=6% Similarity=0.094 Sum_probs=45.7
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCC----hHHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc---CCCC
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGN----HPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS---APAG 220 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~ 220 (350)
..|+++++-... ...+...|..|++..-.-.. ....++..|.++..+.. |- -|.+.+.+.++. ...+
T Consensus 34 ITGas~gIG~~l-a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-D~----~~~~~v~~~~~~~~~~~g~ 107 (271)
T 4iin_A 34 ITGASKGIGAEI-AKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKF-DA----ASESDFIEAIQTIVQSDGG 107 (271)
T ss_dssp ETTCSSHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHHHHHHHSS
T ss_pred EECCCcHHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEEC-CC----CCHHHHHHHHHHHHHhcCC
Confidence 556666663221 12334567777664322111 12233455777777766 32 355555555442 1111
Q ss_pred cEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 221 AIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
.-+++++-...+.+. ..+.++|++..+
T Consensus 108 id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 108 LSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 225555443333322 457788876554
No 407
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=20.41 E-value=2.6e+02 Score=24.86 Aligned_cols=48 Identities=6% Similarity=0.041 Sum_probs=34.0
Q ss_pred CcHHHHHHHHHHHhCCCCCCccCCcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEc
Q 018820 118 GLAEFNKLSAKLILGADSPAIRENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIP 174 (350)
Q Consensus 118 G~~~lr~aia~~~~g~~~~~~~~~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~ 174 (350)
-..++|+.+.+|... .+.|.+|.|.|+-+.=++ .+......+|.|+++
T Consensus 9 ti~elr~~~~~~~~~-------g~~Ig~VPTMGaLH~GHl--sLv~~Ar~~d~VVVS 56 (285)
T 3mxt_A 9 SVKEAKQIVKDWKSH-------QLSIGYVPTMGFLHDGHL--SLVKHAKTQDKVIVS 56 (285)
T ss_dssp CHHHHHHHHHHHHHT-------TCCEEEEEECSSCCHHHH--HHHHHHTTSSEEEEE
T ss_pred CHHHHHHHHHHHHHc-------CCeEEEEcCCCcccHHHH--HHHHHHHhCCEEEEE
Confidence 357889888887532 357889999999888777 444444338887764
No 408
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=20.38 E-value=4e+02 Score=22.71 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=43.6
Q ss_pred cCCchhHHHHHHHHHHHhcCCCEEEEcCCCCCChHHHHHH----cCCeEEEEEeecCCCCCCCHHHHHHHhhcC---CCC
Q 018820 148 CLSGTGSLRVGAEFLARHYHQRTIYIPQPTWGNHPKVFTL----AGLSVKSYRYYDPATRGLNFQGLLEDLGSA---PAG 220 (350)
Q Consensus 148 t~G~~~al~l~~~l~~~~~~gd~Vlv~~P~y~~~~~~~~~----~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~---~~~ 220 (350)
..|+++++-... ...+...|..|++.+-.-.......+. .|.++..+.. |- -|.+.+.+.++.. -.+
T Consensus 31 ITGasggiG~~l-a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~-Dl----~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 31 ITGGGTGLGKGM-TTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC-DV----RDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp EETTTSHHHHHH-HHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEEC-CT----TCHHHHHHHHHHHHHHTCS
T ss_pred EECCCchHHHHH-HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEe-CC----CCHHHHHHHHHHHHHHcCC
Confidence 456666662211 122345677777654332222222221 1666766665 32 3566666555431 111
Q ss_pred cEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 221 AIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 221 ~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
.-+++++-...+.+. ..+.++|++..+
T Consensus 105 id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 105 PNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 225665544332221 456777765543
No 409
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=20.30 E-value=2.8e+02 Score=24.84 Aligned_cols=17 Identities=12% Similarity=0.171 Sum_probs=13.3
Q ss_pred hHHHHHHcCCeEEEEEe
Q 018820 181 HPKVFTLAGLSVKSYRY 197 (350)
Q Consensus 181 ~~~~~~~~G~~~~~v~~ 197 (350)
-...++.+|++++.++-
T Consensus 118 k~~~~~~~GA~v~~~~~ 134 (341)
T 1f2d_A 118 NIELSRIMGADVRVIED 134 (341)
T ss_dssp HHHHHHHTTCEEEECCC
T ss_pred cHHHHHhCCCEEEEeCC
Confidence 55677899999988764
No 410
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=20.29 E-value=57 Score=31.16 Aligned_cols=28 Identities=4% Similarity=0.194 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhcCcEEEEccCCCCCC
Q 018820 239 LQQWERIRQLMRSKGLLPFFDSAYQGFA 266 (350)
Q Consensus 239 ~~~~~~i~~~~~~~~~~ii~DeaY~~~~ 266 (350)
.++++++++.|+++|+-||.|-++....
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 7999999999999999999999887654
No 411
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=20.26 E-value=3.9e+02 Score=22.47 Aligned_cols=99 Identities=10% Similarity=0.042 Sum_probs=49.5
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEc-CCCCCChHHH---HHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIP-QPTWGNHPKV---FTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~-~P~y~~~~~~---~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+.+++ ..|+++++-... ...+...|-.|++. .-.-...... ++..|.++..+.. |- -|.+.+++.++.
T Consensus 4 ~k~vl--VTGas~gIG~ai-a~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dv----~~~~~v~~~~~~ 75 (258)
T 3oid_A 4 NKCAL--VTGSSRGVGKAA-AIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA-NV----GQPAKIKEMFQQ 75 (258)
T ss_dssp CCEEE--ESSCSSHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEEC-CT----TCHHHHHHHHHH
T ss_pred CCEEE--EecCCchHHHHH-HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEc-CC----CCHHHHHHHHHH
Confidence 34555 566777773321 12335678777663 3322222222 2334667777766 32 356666655543
Q ss_pred C---CCCcEEEEecCCCCCCC--CCCCHHHHHHHHH
Q 018820 217 A---PAGAIVLLHACAHNPTG--VDPTLQQWERIRQ 247 (350)
Q Consensus 217 ~---~~~~~~l~~~~p~NPTG--~~~s~~~~~~i~~ 247 (350)
. -.+.-+++++-...+.+ ...+.++|++..+
T Consensus 76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 1 11122566554333333 2467888877655
No 412
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=20.18 E-value=3.4e+02 Score=22.26 Aligned_cols=72 Identities=11% Similarity=0.110 Sum_probs=44.3
Q ss_pred CEEEEcCCCCCCh-------HHHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhcCCCCcEEEEecCCCCCCCCCCCHHH
Q 018820 169 RTIYIPQPTWGNH-------PKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPAGAIVLLHACAHNPTGVDPTLQQ 241 (350)
Q Consensus 169 d~Vlv~~P~y~~~-------~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~l~~~~p~NPTG~~~s~~~ 241 (350)
.+|++..+.-..| ..+++..|.+++.+.. ....+.+.+.+++.... ++.++. .+++ +...
T Consensus 89 ~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~------~vp~~~l~~~~~~~~~d--~v~lS~-~~~~----~~~~ 155 (210)
T 1y80_A 89 GKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGV------DIEPGKFVEAVKKYQPD--IVGMSA-LLTT----TMMN 155 (210)
T ss_dssp CEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCS------SBCHHHHHHHHHHHCCS--EEEEEC-CSGG----GTHH
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCC------CCCHHHHHHHHHHcCCC--EEEEec-cccc----cHHH
Confidence 4566655544444 2345688998876533 35678888877653332 455544 2332 3677
Q ss_pred HHHHHHHHHhcC
Q 018820 242 WERIRQLMRSKG 253 (350)
Q Consensus 242 ~~~i~~~~~~~~ 253 (350)
++++++.+++.+
T Consensus 156 ~~~~i~~l~~~~ 167 (210)
T 1y80_A 156 MKSTIDALIAAG 167 (210)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC
Confidence 889999888765
No 413
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=20.16 E-value=50 Score=24.45 Aligned_cols=23 Identities=13% Similarity=-0.013 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhcCcEEEEccC
Q 018820 239 LQQWERIRQLMRSKGLLPFFDSA 261 (350)
Q Consensus 239 ~~~~~~i~~~~~~~~~~ii~Dea 261 (350)
.+.-++|.+.|+++|+.+++|..
T Consensus 41 ~~~A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 41 NLRAKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHHHHTCCEEECHH
T ss_pred cHHHHHHHHHHHHcCCeEEECHH
Confidence 55668899999999999999863
No 414
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=20.01 E-value=4.1e+02 Score=22.61 Aligned_cols=99 Identities=8% Similarity=0.103 Sum_probs=48.4
Q ss_pred CcEEEEecCCchhHHHHHHHHHHHhcCCCEEEEc-CCCCCChH---HHHHHcCCeEEEEEeecCCCCCCCHHHHHHHhhc
Q 018820 141 NRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIP-QPTWGNHP---KVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGS 216 (350)
Q Consensus 141 ~~v~~~~t~G~~~al~l~~~l~~~~~~gd~Vlv~-~P~y~~~~---~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~ 216 (350)
+.+++ ..|+++++-... ...+...|..|++. ...-.... ..++..|.++..+.. |- -|.+.+++.+++
T Consensus 31 gk~~l--VTGas~GIG~ai-a~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-Dv----~d~~~v~~~~~~ 102 (271)
T 3v2g_A 31 GKTAF--VTGGSRGIGAAI-AKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRA-DN----RDAEAIEQAIRE 102 (271)
T ss_dssp TCEEE--EETTTSHHHHHH-HHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC-CT----TCHHHHHHHHHH
T ss_pred CCEEE--EeCCCcHHHHHH-HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEC-CC----CCHHHHHHHHHH
Confidence 34454 556666663321 12335578777664 22111111 223345777777766 32 366666655543
Q ss_pred C---CCCcEEEEecCCCCCCCC--CCCHHHHHHHHH
Q 018820 217 A---PAGAIVLLHACAHNPTGV--DPTLQQWERIRQ 247 (350)
Q Consensus 217 ~---~~~~~~l~~~~p~NPTG~--~~s~~~~~~i~~ 247 (350)
. -.+.-+++++-.....+. ..+.++|++..+
T Consensus 103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 1 111225555443332222 457888887655
Done!