Query 018824
Match_columns 350
No_of_seqs 231 out of 1362
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 04:21:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018824.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018824hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 2E-33 4.4E-38 275.7 31.0 242 106-348 46-299 (350)
2 KOG1441 Glucose-6-phosphate/ph 100.0 1.5E-33 3.2E-38 271.0 15.5 237 106-348 14-258 (316)
3 TIGR00817 tpt Tpt phosphate/ph 100.0 2.4E-31 5.3E-36 255.0 29.8 240 108-347 1-243 (302)
4 KOG1444 Nucleotide-sugar trans 99.9 3.2E-20 7E-25 176.3 22.6 234 111-348 14-251 (314)
5 KOG1443 Predicted integral mem 99.8 6E-20 1.3E-24 172.8 15.1 203 106-308 13-225 (349)
6 PLN00411 nodulin MtN21 family 99.8 1.1E-16 2.4E-21 157.8 27.0 216 121-341 25-276 (358)
7 PRK11272 putative DMT superfam 99.8 3.3E-16 7.1E-21 149.9 29.1 221 108-342 11-234 (292)
8 TIGR00950 2A78 Carboxylate/Ami 99.8 1.4E-16 3E-21 148.5 25.8 203 126-341 6-212 (260)
9 PRK11689 aromatic amino acid e 99.8 3.6E-16 7.8E-21 149.9 26.5 215 107-341 6-235 (295)
10 PRK11453 O-acetylserine/cystei 99.7 1.3E-15 2.8E-20 146.3 26.5 221 107-341 6-235 (299)
11 PRK10532 threonine and homoser 99.7 7.7E-15 1.7E-19 140.6 26.9 198 126-341 29-229 (293)
12 PF08449 UAA: UAA transporter 99.7 3.5E-14 7.5E-19 136.8 27.8 177 124-302 15-206 (303)
13 TIGR00688 rarD rarD protein. T 99.7 8.4E-14 1.8E-18 130.4 26.7 158 109-276 6-170 (256)
14 PF06027 DUF914: Eukaryotic pr 99.7 4.1E-14 9E-19 137.9 25.4 207 107-313 11-229 (334)
15 PRK15430 putative chlorampheni 99.6 1.9E-13 4.2E-18 131.1 26.8 177 109-295 12-194 (296)
16 KOG1442 GDP-fucose transporter 99.6 1.6E-15 3.4E-20 141.3 7.6 231 108-344 27-274 (347)
17 TIGR03340 phn_DUF6 phosphonate 99.6 1.5E-12 3.3E-17 123.8 24.6 209 125-342 17-232 (281)
18 COG0697 RhaT Permeases of the 99.5 2.4E-11 5.1E-16 113.6 29.1 207 126-341 24-235 (292)
19 COG5070 VRG4 Nucleotide-sugar 99.4 1.3E-12 2.8E-17 118.9 12.7 222 114-345 11-244 (309)
20 PF00892 EamA: EamA-like trans 99.3 1.3E-10 2.7E-15 95.4 13.1 117 125-243 7-125 (126)
21 KOG2765 Predicted membrane pro 99.2 5.5E-10 1.2E-14 108.5 15.2 171 173-345 160-342 (416)
22 PF04142 Nuc_sug_transp: Nucle 99.2 3.6E-09 7.8E-14 99.4 20.4 140 170-309 15-173 (244)
23 TIGR00776 RhaT RhaT L-rhamnose 99.1 1.2E-08 2.6E-13 97.9 21.5 165 111-288 7-186 (290)
24 KOG4510 Permease of the drug/m 99.1 5.2E-11 1.1E-15 111.0 1.9 188 110-302 40-241 (346)
25 COG5006 rhtA Threonine/homoser 99.0 1.2E-07 2.6E-12 88.2 21.2 173 127-309 30-205 (292)
26 KOG1580 UDP-galactose transpor 98.9 1.2E-08 2.5E-13 94.0 12.2 165 135-301 50-223 (337)
27 PF13536 EmrE: Multidrug resis 98.9 1.1E-08 2.3E-13 84.6 10.4 105 143-248 2-110 (113)
28 KOG3912 Predicted integral mem 98.9 8.8E-08 1.9E-12 90.3 16.9 173 125-298 19-224 (372)
29 COG2510 Predicted membrane pro 98.9 2.2E-08 4.8E-13 84.1 11.0 119 124-243 18-138 (140)
30 KOG1581 UDP-galactose transpor 98.9 8.9E-07 1.9E-11 84.4 22.2 162 135-298 48-220 (327)
31 PF03151 TPT: Triose-phosphate 98.7 1.6E-07 3.5E-12 80.6 11.2 96 253-348 1-104 (153)
32 COG2962 RarD Predicted permeas 98.6 2.1E-05 4.5E-10 74.9 24.3 180 112-303 14-197 (293)
33 TIGR00950 2A78 Carboxylate/Ami 98.6 3.6E-06 7.8E-11 78.3 18.1 114 125-239 144-259 (260)
34 KOG2234 Predicted UDP-galactos 98.6 2.3E-05 4.9E-10 76.4 22.8 137 171-307 91-240 (345)
35 KOG1582 UDP-galactose transpor 98.5 1.7E-06 3.6E-11 81.4 11.7 196 103-302 37-242 (367)
36 PRK10532 threonine and homoser 98.4 2.2E-05 4.9E-10 75.2 17.7 116 125-243 164-280 (293)
37 PLN00411 nodulin MtN21 family 98.4 2.1E-05 4.6E-10 77.9 17.9 120 125-245 205-329 (358)
38 KOG4314 Predicted carbohydrate 98.3 1.4E-06 3.1E-11 78.5 7.5 120 172-291 53-174 (290)
39 PRK11272 putative DMT superfam 98.3 2.8E-05 6.2E-10 74.4 16.6 118 126-245 167-286 (292)
40 PRK15051 4-amino-4-deoxy-L-ara 98.3 3.3E-05 7.1E-10 64.0 14.1 64 181-244 46-109 (111)
41 PRK11689 aromatic amino acid e 98.3 3.2E-05 7E-10 74.2 16.1 116 124-244 171-287 (295)
42 KOG2766 Predicted membrane pro 98.1 8.1E-07 1.8E-11 82.9 0.2 187 122-313 31-226 (336)
43 PRK11453 O-acetylserine/cystei 98.1 0.00027 5.9E-09 67.9 17.6 121 125-245 159-288 (299)
44 TIGR03340 phn_DUF6 phosphonate 98.0 4.3E-05 9.3E-10 72.7 9.9 66 176-241 215-280 (281)
45 PRK15430 putative chlorampheni 98.0 0.00037 8.1E-09 66.9 16.3 70 174-243 215-284 (296)
46 KOG1583 UDP-N-acetylglucosamin 98.0 1.2E-05 2.5E-10 76.0 5.7 164 127-294 21-208 (330)
47 TIGR00817 tpt Tpt phosphate/ph 97.9 9.7E-05 2.1E-09 70.9 11.7 121 123-244 159-293 (302)
48 PF03151 TPT: Triose-phosphate 97.8 0.0013 2.8E-08 56.2 16.0 124 119-242 10-151 (153)
49 PF06800 Sugar_transport: Suga 97.8 0.0025 5.5E-08 60.7 18.5 124 165-290 36-174 (269)
50 COG0697 RhaT Permeases of the 97.8 0.0022 4.8E-08 59.6 18.1 118 124-245 169-288 (292)
51 PRK02971 4-amino-4-deoxy-L-ara 97.6 0.00063 1.4E-08 57.9 10.0 70 176-245 51-123 (129)
52 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.0015 3.2E-08 62.8 13.8 126 108-243 154-287 (290)
53 PTZ00343 triose or hexose phos 97.5 0.0039 8.4E-08 61.6 15.5 121 123-243 208-347 (350)
54 PRK10452 multidrug efflux syst 97.3 0.0036 7.7E-08 52.7 11.1 69 176-244 34-103 (120)
55 PRK10650 multidrug efflux syst 97.2 0.0084 1.8E-07 49.6 12.3 66 177-242 40-106 (109)
56 PRK11431 multidrug efflux syst 97.2 0.006 1.3E-07 50.1 11.1 68 176-243 33-101 (105)
57 PRK09541 emrE multidrug efflux 97.2 0.0058 1.3E-07 50.6 11.0 66 179-244 37-103 (110)
58 COG2076 EmrE Membrane transpor 97.1 0.0056 1.2E-07 50.3 9.7 67 178-244 36-103 (106)
59 COG5006 rhtA Threonine/homoser 96.8 0.031 6.7E-07 52.7 13.4 116 124-241 163-279 (292)
60 PF08449 UAA: UAA transporter 96.4 0.091 2E-06 50.6 14.2 130 114-243 159-296 (303)
61 PF00893 Multi_Drug_Res: Small 96.2 0.045 9.8E-07 43.7 9.0 55 181-235 38-93 (93)
62 PRK13499 rhamnose-proton sympo 96.0 1 2.3E-05 44.5 19.1 102 168-269 69-191 (345)
63 PF04657 DUF606: Protein of un 95.9 0.39 8.4E-06 41.3 14.2 116 125-241 17-138 (138)
64 TIGR00803 nst UDP-galactose tr 95.8 0.043 9.3E-07 50.3 8.4 83 196-278 2-111 (222)
65 COG2962 RarD Predicted permeas 95.7 0.74 1.6E-05 44.3 16.1 74 170-243 209-282 (293)
66 PF10639 UPF0546: Uncharacteri 95.6 0.033 7.2E-07 46.3 6.2 71 171-242 41-112 (113)
67 PF06027 DUF914: Eukaryotic pr 95.6 0.52 1.1E-05 46.5 15.6 59 188-246 249-307 (334)
68 PF06800 Sugar_transport: Suga 95.5 0.45 9.8E-06 45.5 14.0 66 174-239 197-266 (269)
69 PF05653 Mg_trans_NIPA: Magnes 95.0 0.059 1.3E-06 52.3 6.8 62 182-243 60-121 (300)
70 TIGR00803 nst UDP-galactose tr 94.1 0.62 1.3E-05 42.5 11.0 65 177-241 157-221 (222)
71 PF00892 EamA: EamA-like trans 93.7 0.12 2.7E-06 41.5 4.9 74 262-341 1-74 (126)
72 TIGR00688 rarD rarD protein. T 92.5 3.9 8.5E-05 37.9 13.8 50 170-219 206-255 (256)
73 COG3238 Uncharacterized protei 91.8 8.2 0.00018 33.7 13.8 119 124-243 20-145 (150)
74 KOG4510 Permease of the drug/m 91.7 0.25 5.3E-06 47.2 4.5 74 168-241 249-322 (346)
75 KOG1581 UDP-galactose transpor 90.1 6.9 0.00015 38.1 12.7 73 168-241 237-310 (327)
76 KOG1441 Glucose-6-phosphate/ph 89.2 1.9 4.1E-05 42.2 8.4 131 111-243 165-306 (316)
77 COG4975 GlcU Putative glucose 86.6 0.32 6.8E-06 45.9 1.2 121 165-287 52-185 (288)
78 PRK13499 rhamnose-proton sympo 86.2 38 0.00081 33.7 16.0 69 176-245 264-342 (345)
79 COG2510 Predicted membrane pro 86.1 7.6 0.00016 33.2 9.1 50 254-303 5-54 (140)
80 KOG2922 Uncharacterized conser 82.6 0.52 1.1E-05 46.0 0.8 67 178-244 69-136 (335)
81 KOG1580 UDP-galactose transpor 82.2 2.7 5.9E-05 39.6 5.3 71 171-241 240-310 (337)
82 COG4975 GlcU Putative glucose 71.4 3.3 7.2E-05 39.2 2.7 72 170-241 207-282 (288)
83 COG5070 VRG4 Nucleotide-sugar 70.8 71 0.0015 30.1 11.1 116 123-239 169-291 (309)
84 PF06379 RhaT: L-rhamnose-prot 68.0 1.1E+02 0.0024 30.4 12.4 134 168-301 69-234 (344)
85 PF04142 Nuc_sug_transp: Nucle 63.2 1.3E+02 0.0029 28.1 15.9 114 119-233 124-242 (244)
86 PF04342 DUF486: Protein of un 61.9 90 0.002 25.7 9.4 30 213-242 77-106 (108)
87 KOG1444 Nucleotide-sugar trans 59.4 59 0.0013 31.9 8.7 129 113-242 161-298 (314)
88 KOG2765 Predicted membrane pro 50.2 59 0.0013 32.8 7.2 63 185-247 331-393 (416)
89 KOG4831 Unnamed protein [Funct 49.0 30 0.00064 28.6 4.1 70 172-242 53-123 (125)
90 COG3169 Uncharacterized protei 45.3 1.7E+02 0.0037 23.9 11.2 31 213-243 84-114 (116)
91 KOG1582 UDP-galactose transpor 43.7 1.8E+02 0.0038 28.4 9.0 50 197-246 285-334 (367)
92 COG5373 Predicted membrane pro 41.7 5.4E+02 0.012 28.8 19.1 23 194-216 222-244 (931)
93 PF04657 DUF606: Protein of un 32.9 3.1E+02 0.0066 23.3 8.8 52 254-305 3-55 (138)
94 PF09930 DUF2162: Predicted tr 28.8 4.8E+02 0.01 24.3 13.9 134 107-242 35-175 (224)
95 PF05884 ZYG-11_interact: Inte 24.5 6.7E+02 0.015 24.5 19.2 53 175-231 170-222 (299)
96 PRK02237 hypothetical protein; 24.3 1.3E+02 0.0028 24.9 4.1 36 209-244 70-105 (109)
97 PF02694 UPF0060: Uncharacteri 23.4 1.2E+02 0.0026 25.0 3.8 36 209-244 68-103 (107)
98 KOG1442 GDP-fucose transporter 21.6 89 0.0019 30.4 3.1 132 109-241 184-324 (347)
99 PF11139 DUF2910: Protein of u 20.4 6.3E+02 0.014 22.7 12.0 49 107-155 28-82 (214)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=2e-33 Score=275.73 Aligned_cols=242 Identities=35% Similarity=0.631 Sum_probs=207.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHH
Q 018824 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHA 183 (350)
Q Consensus 106 ~~l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~--~~~~~~ll~lgl~~~ 183 (350)
+.+++..+++.||++|+.++++||++++++|+|++++++|++++.+++.+.|..+.++.++++ +++++.++|+|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999998877666765555545553 458899999999998
Q ss_pred HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHH
Q 018824 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIS 263 (350)
Q Consensus 184 l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~ 263 (350)
..+...+.|+++++++++|++|+++|+|+++++++++|||++++++++++++++||.+++.+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999888999999999999999999
Q ss_pred HHHHHHHHhhhccC-------CCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhh---hhhhhchHHHHHHHHHHHH
Q 018824 264 FTYRSIYSKKAMTD-------MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSD---AISKVGMVKFISDLFWVGM 333 (350)
Q Consensus 264 ~A~~~Vl~kk~~~~-------l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~---~~~~~g~~~~~~~l~~sGl 333 (350)
+++|+++.||.+++ +++.+++.++++++.++++|+.+..|+++... .+.+ ...+.....+...++.+|+
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~s~l 284 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP-VWTNYTANMTNYTKGIIIFKIFFSGV 284 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHhhhcccccchHHHHHHHHHHHH
Confidence 99999999998853 56888888899999999999998788754322 2211 1111122234446778999
Q ss_pred HHHHHHHHHHHHhhc
Q 018824 334 FYHLYNQVCILLTCC 348 (350)
Q Consensus 334 ~~~lyn~~sf~~l~~ 348 (350)
+|++||+++|++++.
T Consensus 285 ~~~l~n~~~f~~l~~ 299 (350)
T PTZ00343 285 WYYLYNEVAFYCLGK 299 (350)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999875
No 2
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=270.99 Aligned_cols=237 Identities=38% Similarity=0.561 Sum_probs=211.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-ChHHHHHHHHHHHHH
Q 018824 106 PALVTGFFFFMWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI-DSKLLKLLIPVAVCH 182 (350)
Q Consensus 106 ~~l~~~~~~~~W~~~s~~~~i~nK~il~--~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i-~~~~~~~ll~lgl~~ 182 (350)
+.+..+.++..|+++|+.+++.||++++ +|++|++++.+|.+++.+..+..|..+..+..+. ++.+++.++|+|+++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 5778999999999999999999999999 8999999999999999998888887777766555 446899999999999
Q ss_pred HHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHH
Q 018824 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 262 (350)
Q Consensus 183 ~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l 262 (350)
.++++++|.|+.+++|+++|++|+++|++++++++++.+|++++..++++++++.||.+++.+|.+||+.|++.++++++
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHH-HHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHH
Q 018824 263 SFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCI-PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL 337 (350)
Q Consensus 263 ~~A~~~Vl~kk~~~----~l~~~~l~~~~~~~s~l~Ll-p~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~l 337 (350)
.+++++++.|+.++ ++|++++++|++++++++++ |+....|+... . ++.+. .... .++..++.+ +++|+
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~--~~~~-~~~~~~~~s-v~~f~ 247 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTA--PWFV-TFLILLLNS-VLAFL 247 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeecc--ccch-hhHHHHHHH-HHHHH
Confidence 99999999999883 48999999999999999999 88888888776 3 33221 1111 344455555 99999
Q ss_pred HHHHHHHHhhc
Q 018824 338 YNQVCILLTCC 348 (350)
Q Consensus 338 yn~~sf~~l~~ 348 (350)
||+++|+++|-
T Consensus 248 ~Nls~f~~ig~ 258 (316)
T KOG1441|consen 248 LNLSAFLVIGR 258 (316)
T ss_pred HHHHHHHHHcc
Confidence 99999999984
No 3
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=2.4e-31 Score=255.01 Aligned_cols=240 Identities=60% Similarity=1.029 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Q 018824 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHV 187 (350)
Q Consensus 108 l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~ 187 (350)
+++..++.+||++|+.++++||+++++|++|+++++.|++++.+.+.+.|..+.+++++.++++++.+++.|++++.++.
T Consensus 1 ~~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 1 LQTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHV 80 (302)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999988766655444455566788999999999999988999
Q ss_pred HHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 018824 188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYR 267 (350)
Q Consensus 188 ~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~~A~~ 267 (350)
+.|.+++|+++++++++++++|+|+++++++++|||++++++.+++++++|+.+...+|.+++..|++++++++++|++|
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~ 160 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR 160 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887777778888999999999999999
Q ss_pred HHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHH-HHHHHHHHHHHH
Q 018824 268 SIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG-MFYHLYNQVCIL 344 (350)
Q Consensus 268 ~Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sG-l~~~lyn~~sf~ 344 (350)
+++.||.++ ++|+.+++.|++.++.++++|++...|++....+.+.+.........++...+..+ .++++||+..|+
T Consensus 161 ~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T TIGR00817 161 NIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM 240 (302)
T ss_pred HHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887 89999999999999999999998887876544333322111112223443343444 478899988887
Q ss_pred Hhh
Q 018824 345 LTC 347 (350)
Q Consensus 345 ~l~ 347 (350)
.+.
T Consensus 241 ~l~ 243 (302)
T TIGR00817 241 LLG 243 (302)
T ss_pred HHc
Confidence 765
No 4
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=3.2e-20 Score=176.26 Aligned_cols=234 Identities=18% Similarity=0.271 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH--HHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 018824 111 GFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSV--IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (350)
Q Consensus 111 ~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~--~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~ 188 (350)
....+.|..+|+.+.+.||+++.+++||..+.. .|.+++.+.+.+....|+.+.++++++..|.++|+++++.+..++
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t 93 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT 93 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence 456667778899999999999999998887777 899999998877777788888889999999999999999999999
Q ss_pred HHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHHH
Q 018824 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRS 268 (350)
Q Consensus 189 ~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~~A~~~ 268 (350)
+..+++|+++++..++|..+|+++++.+.+|+|.+++...+.++....+|......+|.++|..|+.|++...++-+.+.
T Consensus 94 ~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~ 173 (314)
T KOG1444|consen 94 GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFV 173 (314)
T ss_pred ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018824 269 IYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVCILLT 346 (350)
Q Consensus 269 Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~sf~~l 346 (350)
++.||..+ +++...+++|.++.++..+....++.|..+ . .....+......++..+.++|++.+..|.+++.|+
T Consensus 174 v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~--~--l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct 249 (314)
T KOG1444|consen 174 VYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD--A--LSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCT 249 (314)
T ss_pred HHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH--H--HHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998763 578889999999999999988887776543 1 11111112234677889999999999999999987
Q ss_pred hc
Q 018824 347 CC 348 (350)
Q Consensus 347 ~~ 348 (350)
=-
T Consensus 250 ~~ 251 (314)
T KOG1444|consen 250 RV 251 (314)
T ss_pred hh
Confidence 43
No 5
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.83 E-value=6e-20 Score=172.85 Aligned_cols=203 Identities=20% Similarity=0.301 Sum_probs=178.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH-HhcCC---CCCCCCh-HHHHHHHHHHH
Q 018824 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLP---KRAPIDS-KLLKLLIPVAV 180 (350)
Q Consensus 106 ~~l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~-~~~l~---~~~~i~~-~~~~~ll~lgl 180 (350)
+.+.+..++.+||++|++..+++|+.-.+|++|.+++.+|+++-.++..... ..+.+ ++.+.++ ++.+++.|.|+
T Consensus 13 ~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal 92 (349)
T KOG1443|consen 13 NRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL 92 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh
Confidence 4566777889999999999999999999999999999999998887654322 22111 1223444 46788999999
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHH
Q 018824 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMIS 260 (350)
Q Consensus 181 ~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S 260 (350)
..++.+.++|+|++|+++++++|.|+..++|+.+++.+|.-||+++.-.+.++++.+|+.+.++.+.+||..|+.+.+++
T Consensus 93 ata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~a 172 (349)
T KOG1443|consen 93 ATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAA 172 (349)
T ss_pred hhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccC-----CCHHHHHHHHHHHHHHHHHHHHHHhcCchhh
Q 018824 261 NISFTYRSIYSKKAMTD-----MDSTNIYAYISIIALFVCIPPAIIVEGPQLI 308 (350)
Q Consensus 261 ~l~~A~~~Vl~kk~~~~-----l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~ 308 (350)
.++.+++..+.+.++++ -+|....++.+++..+.++|..+.+||+...
T Consensus 173 S~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~ 225 (349)
T KOG1443|consen 173 SLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLI 225 (349)
T ss_pred HHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccc
Confidence 99999999999988753 4688999999999999999999999998764
No 6
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.78 E-value=1.1e-16 Score=157.83 Aligned_cols=216 Identities=11% Similarity=0.070 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Q 018824 121 NVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAV 198 (350)
Q Consensus 121 s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l-~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsv 198 (350)
...+.++.|..++.--+|..+.++|+.++++++++. +..+. ++.++.+++++..++..|++......+.+.+++|+++
T Consensus 25 ~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~~tsa 104 (358)
T PLN00411 25 VVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIEYSNP 104 (358)
T ss_pred HHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHhhccH
Confidence 344567889999874458889999999998876543 22211 2223345667788888888775556678999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHH------cCccCChhHHHHHHHHHHhhhhhcc-ccc-----------------------c
Q 018824 199 SFTHTIKALEPFFNAAASQFI------LGQQLPLTLWLSLAPVVIGVSMASL-TEL-----------------------S 248 (350)
Q Consensus 199 s~~~iika~~Pifv~lls~lf------lkEr~t~~~ilsllliv~GV~l~~~-~e~-----------------------~ 248 (350)
+.+.++.+++|+|++++++++ +|||+++++++|++++++|+.++.. ++. .
T Consensus 105 ~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (358)
T PLN00411 105 TLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSN 184 (358)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCCCc
Confidence 999999999999999999999 6999999999999999999998653 111 1
Q ss_pred cc-HHHHHHHHHHHHHHHHHHHHHhhhccCCCHH-HHHHHHHHHHHHHHHHHHHHhcCchhhh--cchhhhhhhhchHHH
Q 018824 249 FN-WTGFISAMISNISFTYRSIYSKKAMTDMDST-NIYAYISIIALFVCIPPAIIVEGPQLIK--HGLSDAISKVGMVKF 324 (350)
Q Consensus 249 f~-~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~-~l~~~~~~~s~l~Llp~al~~Eg~~~~~--~~~~~~~~~~g~~~~ 324 (350)
.+ ..|+.++++++++|++|+++.|+..+++++. ....|++.++.+.+.++++..|+.+... ..+.. .....+
T Consensus 185 ~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~i~ 260 (358)
T PLN00411 185 SDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI----TLITIV 260 (358)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch----HHHHHH
Confidence 13 4599999999999999999999988887654 5667777777777777777766532211 11111 112245
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018824 325 ISDLFWVGMFYHLYNQV 341 (350)
Q Consensus 325 ~~~l~~sGl~~~lyn~~ 341 (350)
|.+++ ++++|.+||..
T Consensus 261 y~~i~-t~lay~lw~~~ 276 (358)
T PLN00411 261 TMAII-TSVYYVIHSWT 276 (358)
T ss_pred HHHHH-HHHHHHHHHHH
Confidence 55543 67788888765
No 7
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.78 E-value=3.3e-16 Score=149.89 Aligned_cols=221 Identities=15% Similarity=0.127 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHH
Q 018824 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGH 186 (350)
Q Consensus 108 l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~-~l~~ 186 (350)
+......++|.... ++.|...++.+ |..++++|+.++.+++++....+ ++...++++++.....|++. ...+
T Consensus 11 ~~~~~~~~iWg~~~----~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 11 GALFALYIIWGSTY----LVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLR--GHPLPTLRQWLNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHHHHHhhHH----HHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHh--CCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 34455666675533 67899998876 99999999999988765432222 21123466788788888765 3456
Q ss_pred HHHHHHh-hhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc-cccccHHHHHHHHHHHHHH
Q 018824 187 VTSNVSF-AAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNISF 264 (350)
Q Consensus 187 ~~~n~sl-~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~-e~~f~~~G~~lal~S~l~~ 264 (350)
.+.+++. ++++++.+.++.++.|+++.+++++ +|||++++++.+++++++|+.++..+ +.+.+..|++++++++++|
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~ 162 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASW 162 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHH
Confidence 6778888 8999999999999999999999986 69999999999999999999987643 3445678999999999999
Q ss_pred HHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHH
Q 018824 265 TYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342 (350)
Q Consensus 265 A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~s 342 (350)
+.+++..||..++ ++.....++..++..++.++....|.+....++..+ -....+.+++.+++.|.+||...
T Consensus 163 a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~i~~s~~~~~l~~~~~ 234 (292)
T PRK11272 163 AFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSG-----FLALGYLAVFGSIIAISAYMYLL 234 (292)
T ss_pred HHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997543 455667788888888888887654432211111111 11356677777888888888654
No 8
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.78 E-value=1.4e-16 Score=148.54 Aligned_cols=203 Identities=15% Similarity=0.119 Sum_probs=157.2
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHhhhcchHHHHHH
Q 018824 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFTHTI 204 (350)
Q Consensus 126 i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~-~~l~~~~~n~sl~~vsvs~~~ii 204 (350)
+..|+.+++...|..+.+.|++++.+++.+....+ .++++++..+..+.+ +.++..+.+.|+++++++.+.++
T Consensus 6 ~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii 79 (260)
T TIGR00950 6 VVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL 79 (260)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence 57899988755699999999998888765543322 234556666666654 56677888999999999999999
Q ss_pred HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCH--H
Q 018824 205 KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDS--T 281 (350)
Q Consensus 205 ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e-~~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~--~ 281 (350)
.+++|+++.+++.+++|||++++++.+++++++|+.++..++ .+.+..|++++++++++|+.++++.||..++.++ .
T Consensus 80 ~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~ 159 (260)
T TIGR00950 80 LYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELL 159 (260)
T ss_pred HhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHH
Confidence 999999999999999999999999999999999999875433 4456789999999999999999999998877774 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824 282 NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV 341 (350)
Q Consensus 282 ~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~ 341 (350)
....+.+.++.++++|.....+..... ...+ -...++.+++.++++|.+|+..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~a 212 (260)
T TIGR00950 160 QFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQ-----WGALLYLGLIGTALAYFLWNKG 212 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCc--chHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 555577888999998887765432211 1111 1124666777788888888865
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.76 E-value=3.6e-16 Score=149.91 Aligned_cols=215 Identities=13% Similarity=0.138 Sum_probs=146.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHH
Q 018824 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGH 186 (350)
Q Consensus 107 ~l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~ 186 (350)
.+.....+++|... . +..|..++++| |..+.++|+.++.+++.+.. +.++ .++++++.++..++.+...+
T Consensus 6 ~l~~l~a~~~Wg~~-~---~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~---~~~~~~~~~~~~~l~~~~~~ 75 (295)
T PRK11689 6 TLIGLIAILLWSTM-V---GLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPR---LRQFPKRYLLAGGLLFVSYE 75 (295)
T ss_pred hHHHHHHHHHHHHH-H---HHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cccc---cccccHHHHHHHhHHHHHHH
Confidence 34445666777543 3 67899999997 99999999999988765432 1122 22222333444444444556
Q ss_pred HHHHHHhhh----cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccccc-----------ccH
Q 018824 187 VTSNVSFAA----VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS-----------FNW 251 (350)
Q Consensus 187 ~~~n~sl~~----vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~-----------f~~ 251 (350)
.+.+.++++ +++..+.++.++.|+++.+++++++|||++++++.+++++++|+.++..++.+ .+.
T Consensus 76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK11689 76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNP 155 (295)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccCh
Confidence 666666654 57777889999999999999999999999999999999999999987654321 235
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHH
Q 018824 252 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (350)
Q Consensus 252 ~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~s 331 (350)
.|++++++++++|+.|+++.||..++.++..... ..+.+.+.+.....|.+.. ...++. . ...++.+ +.+
T Consensus 156 ~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~-~~~~~~----~-~~l~~~~-~~t 225 (295)
T PRK11689 156 LSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPAM-VFSLPA----I-IKLLLAA-AAM 225 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCccc-cCCHHH----H-HHHHHHH-HHH
Confidence 6999999999999999999999887888776432 2333444444333332211 111111 1 1234444 468
Q ss_pred HHHHHHHHHH
Q 018824 332 GMFYHLYNQV 341 (350)
Q Consensus 332 Gl~~~lyn~~ 341 (350)
+++|.+||..
T Consensus 226 ~~~~~l~~~a 235 (295)
T PRK11689 226 GFGYAAWNVG 235 (295)
T ss_pred HHHHHHHHHH
Confidence 8899999875
No 10
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.74 E-value=1.3e-15 Score=146.27 Aligned_cols=221 Identities=13% Similarity=0.252 Sum_probs=152.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHH-H
Q 018824 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHAL-G 185 (350)
Q Consensus 107 ~l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l-~ 185 (350)
.+......++|.... +..|..+++++ |..+.++|+.++.+.++... . ++ +.+ ++.++..+++... .
T Consensus 6 ~l~~l~~~~~Wg~~~----~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~--~-~~--~~~---~~~~~~~g~~~~~~~ 72 (299)
T PRK11453 6 GVLALLVVVVWGLNF----VVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFV--A-RP--KVP---LNLLLGYGLTISFGQ 72 (299)
T ss_pred HHHHHHHHHHHhhhH----HHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHh--c-CC--CCc---hHHHHHHHHHHHHHH
Confidence 344556677776543 56799998887 99999999999776544322 1 11 111 3344555554333 3
Q ss_pred HHHHHHHhhh-cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc---ccccHHHHHHHHHHH
Q 018824 186 HVTSNVSFAA-VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISN 261 (350)
Q Consensus 186 ~~~~n~sl~~-vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e---~~f~~~G~~lal~S~ 261 (350)
..+.+.++++ ++++.+.++.++.|+++.+++++++|||++.+++.+++++++|+.++..++ .+.++.|+.++++++
T Consensus 73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aa 152 (299)
T PRK11453 73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAA 152 (299)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHH
Confidence 3455678887 688999999999999999999999999999999999999999999876442 223467999999999
Q ss_pred HHHHHHHHHHhhhccCCC---HHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhc-hHHHHHHHHHHHHHHHH
Q 018824 262 ISFTYRSIYSKKAMTDMD---STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG-MVKFISDLFWVGMFYHL 337 (350)
Q Consensus 262 l~~A~~~Vl~kk~~~~l~---~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g-~~~~~~~l~~sGl~~~l 337 (350)
++|+.|+++.||..++.+ ......+++.++.+.+.......|++....+.+.. .+-.. ...+|.+++.+++.|.+
T Consensus 153 l~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~i~~t~~~~~l 231 (299)
T PRK11453 153 FSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT-IDMTTILSLMYLAFVATIVGYGI 231 (299)
T ss_pred HHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999765433 33445566666655555555555654321111110 00011 23577888889999999
Q ss_pred HHHH
Q 018824 338 YNQV 341 (350)
Q Consensus 338 yn~~ 341 (350)
|+..
T Consensus 232 ~~~~ 235 (299)
T PRK11453 232 WGTL 235 (299)
T ss_pred HHHH
Confidence 9863
No 11
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.71 E-value=7.7e-15 Score=140.58 Aligned_cols=198 Identities=14% Similarity=0.122 Sum_probs=148.1
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHH
Q 018824 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK 205 (350)
Q Consensus 126 i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iik 205 (350)
.+.|+++++++ |..+.++|++++.+++++.... ++.+.++++++..+..|++......+.++++++++++.+.++.
T Consensus 29 ~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~ 104 (293)
T PRK10532 29 SLAKSLFPLVG-APGVTALRLALGTLILIAIFKP---WRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALE 104 (293)
T ss_pred HHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhH---HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 47899999987 9999999999998876544321 1123456778888888888777777888999999999999999
Q ss_pred hhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc--c-ccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHH
Q 018824 206 ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT--E-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTN 282 (350)
Q Consensus 206 a~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~--e-~~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~ 282 (350)
.+.|+++.+++ +|++... ..+.++++|+.++... + .+.+..|++++++++++|+.|.++.||..++.++..
T Consensus 105 ~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~~~~ 178 (293)
T PRK10532 105 FTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHGPAT 178 (293)
T ss_pred HHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Confidence 99999998876 3665544 4566788999886532 2 234578999999999999999999999988888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824 283 IYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV 341 (350)
Q Consensus 283 l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~ 341 (350)
. .++..++.+++.|+....++ .... ++. .-...++.+++.+.+.|.+||..
T Consensus 179 ~-~~~~~~~~~~l~~~~~~~~~-~~~~-~~~-----~~~~~l~lgv~~t~~~~~l~~~~ 229 (293)
T PRK10532 179 V-AIGSLIAALIFVPIGALQAG-EALW-HWS-----ILPLGLAVAILSTALPYSLEMIA 229 (293)
T ss_pred H-HHHHHHHHHHHHHHHHHccC-cccC-CHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 46667788888888765433 1111 111 10124688888899999998865
No 12
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.68 E-value=3.5e-14 Score=136.77 Aligned_cols=177 Identities=19% Similarity=0.302 Sum_probs=145.7
Q ss_pred HHHHHHHHHhc--C-CcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHH
Q 018824 124 FNILNKRIYNY--F-PYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 200 (350)
Q Consensus 124 ~~i~nK~il~~--f-p~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~ 200 (350)
..+..+.+... . ++|+++++.|+++..+......... +.++.++..++..++.++++.++..++|.|++|++.+.
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~ 92 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLF--KFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPT 92 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhc--cccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 34555666553 2 3699999999999888655432211 11223445678889999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccccc----cc------HHHHHHHHHHHHHHHHHHHH
Q 018824 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS----FN------WTGFISAMISNISFTYRSIY 270 (350)
Q Consensus 201 ~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~----f~------~~G~~lal~S~l~~A~~~Vl 270 (350)
.+++|++.|+++++++++++|+|++++++++++++++|+++...+|.+ .+ ..|+++.+++.++.+++.++
T Consensus 93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~ 172 (303)
T PF08449_consen 93 QIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY 172 (303)
T ss_pred HHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998765421 11 23999999999999999999
Q ss_pred Hhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHh
Q 018824 271 SKKAMT--DMDSTNIYAYISIIALFVCIPPAIIV 302 (350)
Q Consensus 271 ~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~ 302 (350)
++|..+ +.++.+.++|.+.++.++.++.....
T Consensus 173 qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l 206 (303)
T PF08449_consen 173 QEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLL 206 (303)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999885 56889999999999999998888774
No 13
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.66 E-value=8.4e-14 Score=130.45 Aligned_cols=158 Identities=12% Similarity=0.082 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcCCC-----CCCCChHH-HHHHHHHHHH
Q 018824 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPK-----RAPIDSKL-LKLLIPVAVC 181 (350)
Q Consensus 109 ~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l~~-----~~~i~~~~-~~~ll~lgl~ 181 (350)
.......+|.... ++.|+ .++.+ |..+.++|++++.+++.+. ...+.++ .++.++++ +..+...+++
T Consensus 6 ~~i~a~~~wg~~~----~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 6 VSLLASFLFGYMY----YYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred HHHHHHHHHHHHH----HHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 3445556675544 56788 45565 9999999999998765432 2222111 01111222 3345666777
Q ss_pred HHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHH
Q 018824 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN 261 (350)
Q Consensus 182 ~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~ 261 (350)
...+..+.++|+++++++.++++.+++|+|+++++++++|||++++++++++++++|+.++..++.+.+ .++++++
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa 155 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLA 155 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHH
Confidence 777888999999999999999999999999999999999999999999999999999998754322222 3578899
Q ss_pred HHHHHHHHHHhhhcc
Q 018824 262 ISFTYRSIYSKKAMT 276 (350)
Q Consensus 262 l~~A~~~Vl~kk~~~ 276 (350)
++|+.|.+..||..+
T Consensus 156 ~~~a~~~i~~~~~~~ 170 (256)
T TIGR00688 156 FSFTAYGLIRKALKN 170 (256)
T ss_pred HHHHHHHHHHhhcCC
Confidence 999999999998753
No 14
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.66 E-value=4.1e-14 Score=137.92 Aligned_cols=207 Identities=9% Similarity=0.059 Sum_probs=156.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCChHHHHHHHHHHHHHH
Q 018824 107 ALVTGFFFFMWYFLNVIFNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLP--KRAPIDSKLLKLLIPVAVCHA 183 (350)
Q Consensus 107 ~l~~~~~~~~W~~~s~~~~i~nK~il~~-fp~P~~lt~~r~~ia~l~ll~~~~~~l~--~~~~i~~~~~~~ll~lgl~~~ 183 (350)
.+...++.=+--.++...+..+.++-++ +..|.+-+++..+.-.++.......+.. +..+.-+++|.+.+.+|++-.
T Consensus 11 ~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv 90 (334)
T PF06027_consen 11 FWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDV 90 (334)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHH
Confidence 3333333333334455566677766664 6668887777665544432222221211 111222345556677899999
Q ss_pred HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccccc---------ccHHHH
Q 018824 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS---------FNWTGF 254 (350)
Q Consensus 184 l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~---------f~~~G~ 254 (350)
.++++.+.|++|++++..+++..+.-+|+++++++++|+|+++.+++|++++++|++++...|.. ....|+
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GD 170 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGD 170 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhH
Confidence 99999999999999999999999999999999999999999999999999999999987765521 137899
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchh
Q 018824 255 ISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLS 313 (350)
Q Consensus 255 ~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~ 313 (350)
+++++++++||+++|+.++..++.+..+...+..+++.++..+.....|..++-.-.|.
T Consensus 171 ll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~ 229 (334)
T PF06027_consen 171 LLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT 229 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC
Confidence 99999999999999999999999999999999999999999999888887776544453
No 15
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.64 E-value=1.9e-13 Score=131.08 Aligned_cols=177 Identities=16% Similarity=0.143 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCC---CC-ChHHHHHHHHHHHHHHH
Q 018824 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA---PI-DSKLLKLLIPVAVCHAL 184 (350)
Q Consensus 109 ~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~---~i-~~~~~~~ll~lgl~~~l 184 (350)
......++|.... ++.|.. ++.+ |..+.++|++++.+++.+....+.+.+. +. +++++......++....
T Consensus 12 ~~l~a~~~wg~~~----~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (296)
T PRK15430 12 LALAAYFIWGIAP----AYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGG 85 (296)
T ss_pred HHHHHHHHHHHHH----HHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 3444455564443 455875 5576 9999999999998765443321111100 01 23333333333444566
Q ss_pred HHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHH
Q 018824 185 GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISF 264 (350)
Q Consensus 185 ~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~~ 264 (350)
++.+.++++++++++.+.++.++.|+++++++++++|||++++++.+++++++|+.++...+.+.+ .++++++++|
T Consensus 86 ~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~ 161 (296)
T PRK15430 86 NWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSF 161 (296)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999999999999998764322222 4578889999
Q ss_pred HHHHHHHhhhccC--CCHHHHHHHHHHHHHHHH
Q 018824 265 TYRSIYSKKAMTD--MDSTNIYAYISIIALFVC 295 (350)
Q Consensus 265 A~~~Vl~kk~~~~--l~~~~l~~~~~~~s~l~L 295 (350)
+.|.++.||..++ .+......|+.+.+.+..
T Consensus 162 a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (296)
T PRK15430 162 AFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYL 194 (296)
T ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 9999999987532 233444455555555443
No 16
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.60 E-value=1.6e-15 Score=141.27 Aligned_cols=231 Identities=19% Similarity=0.295 Sum_probs=185.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcHHHHHHHHHHHHHHHHHHH-HHh-cCC---CCC--CCChHHHHHHH
Q 018824 108 LVTGFFFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCLVS-WAV-GLP---KRA--PIDSKLLKLLI 176 (350)
Q Consensus 108 l~~~~~~~~W~~~s~~~~i~nK~il~~----fp~P~~lt~~r~~ia~l~ll~~-~~~-~l~---~~~--~i~~~~~~~ll 176 (350)
.+...-...++.+++.+.+.||++++. ..-|.+++..|.++...+++.+ +.. +.+ ..+ +++-+..+.++
T Consensus 27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vl 106 (347)
T KOG1442|consen 27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVL 106 (347)
T ss_pred hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhc
Confidence 345556666778899999999999985 4579999999999998877543 221 111 112 35556778899
Q ss_pred HHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc---ccccHHH
Q 018824 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTG 253 (350)
Q Consensus 177 ~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e---~~f~~~G 253 (350)
|+++.+.+.+.+.|.+++|++++|+++-++++-+|+++++++++|+|-+.....+.++++.|-.+-+..| ..+++.|
T Consensus 107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G 186 (347)
T KOG1442|consen 107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG 186 (347)
T ss_pred chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999987766555 3567999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCC--HHHHHHHHHHHHHHHHHHHHHHhcC-chhhhcchhhhhhhhchHHHHHHHHH
Q 018824 254 FISAMISNISFTYRSIYSKKAMTDMD--STNIYAYISIIALFVCIPPAIIVEG-PQLIKHGLSDAISKVGMVKFISDLFW 330 (350)
Q Consensus 254 ~~lal~S~l~~A~~~Vl~kk~~~~l~--~~~l~~~~~~~s~l~Llp~al~~Eg-~~~~~~~~~~~~~~~g~~~~~~~l~~ 330 (350)
.++++.|.++-|+..++.||.....+ -+.+.+|++..++++.+|..++... ...+. + ......+||..+.+
T Consensus 187 vifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~--~----~~l~a~~Fw~~mtL 260 (347)
T KOG1442|consen 187 VIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG--F----PHLPAIKFWILMTL 260 (347)
T ss_pred hHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC--c----ccchHHHHHHHHHH
Confidence 99999999999999999998775543 4689999999999999999777532 22222 1 12334589999999
Q ss_pred HHHHHHHHHHHHHH
Q 018824 331 VGMFYHLYNQVCIL 344 (350)
Q Consensus 331 sGl~~~lyn~~sf~ 344 (350)
+|++.+..|.+.+.
T Consensus 261 sglfgF~mgyvTg~ 274 (347)
T KOG1442|consen 261 SGLFGFAMGYVTGW 274 (347)
T ss_pred HHHHHHHhhheeeE
Confidence 99999999987654
No 17
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.56 E-value=1.5e-12 Score=123.83 Aligned_cols=209 Identities=14% Similarity=0.115 Sum_probs=133.7
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 018824 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 202 (350)
Q Consensus 125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~--l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ 202 (350)
++.+|...++- ++. ..++...+.+.+.+....+ ..+.++.+++.+...+..++.....+.+.+.++++.+++...
T Consensus 17 ~~~~k~~~~~~-~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 93 (281)
T TIGR03340 17 NLMAKSHADKE-PDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVY 93 (281)
T ss_pred HHHHhhcCCch-hHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhh
Confidence 45678666652 232 3555555555444332211 111122234444445555556677788889999999999999
Q ss_pred HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc-cccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHH
Q 018824 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-SFNWTGFISAMISNISFTYRSIYSKKAMTDMDST 281 (350)
Q Consensus 203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~-~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~ 281 (350)
.+.+++|+++++++++++|||+++++++|+++++.|+.++..++. +.+..|+.++++++++|+.|+++.|+..++.++.
T Consensus 94 ~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~ 173 (281)
T TIGR03340 94 PLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAF 173 (281)
T ss_pred hHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccccccchhcc
Confidence 999999999999999999999999999999999999998765432 3456788899999999999999999875555443
Q ss_pred HHHHHHHHHHHHHH-HHHHHHh---cCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHHH
Q 018824 282 NIYAYISIIALFVC-IPPAIIV---EGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQVC 342 (350)
Q Consensus 282 ~l~~~~~~~s~l~L-lp~al~~---Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~s 342 (350)
....+...++.+.. .|+.+.. +...... . ........+...+.+++.|.+|+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~s~l~~~l~~~al 232 (281)
T TIGR03340 174 YSALGYLGIGFLAMGWPFLLLYLKRHGRSMFP---Y---ARQILPSATLGGLMIGGAYALVLWAM 232 (281)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhccchhh---h---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111122222222 3332221 2111101 0 01112346667777888888888653
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.53 E-value=2.4e-11 Score=113.61 Aligned_cols=207 Identities=16% Similarity=0.162 Sum_probs=136.1
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHH
Q 018824 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK 205 (350)
Q Consensus 126 i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iik 205 (350)
...|...++...+......|+.++.+........+.....+..++.+...+..++.......+.+.++++++++.++++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 103 (292)
T COG0697 24 IALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLII 103 (292)
T ss_pred HHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 45566666533355666669988887633222211111111111222334444445566778889999999999999999
Q ss_pred hhhHHHHHHHHH-HHcCccCChhHHHHHHHHHHhhhhhcccccccc---HHHHHHHHHHHHHHHHHHHHHhhhccCCCHH
Q 018824 206 ALEPFFNAAASQ-FILGQQLPLTLWLSLAPVVIGVSMASLTELSFN---WTGFISAMISNISFTYRSIYSKKAMTDMDST 281 (350)
Q Consensus 206 a~~Pifv~lls~-lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~---~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~ 281 (350)
++.|+++.+++. +++|||++++++.+++.++.|+.++...+...+ ..|+.+++.++++++.+.++.|+.. +.++.
T Consensus 104 ~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~~~ 182 (292)
T COG0697 104 GLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-RLGPV 182 (292)
T ss_pred HHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCChH
Confidence 999999999997 777999999999999999999999887665432 5899999999999999999999987 66776
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824 282 NIYA-YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV 341 (350)
Q Consensus 282 ~l~~-~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~ 341 (350)
.... ++.........+... .+.+ .+..+.+. ....+.+++.+++.+.+|+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~-----~~~~~~g~~~~~i~~~~~~~~ 235 (292)
T COG0697 183 TLALLLQLLLALLLLLLFFL-SGFG--APILSRAW-----LLLLYLGVFSTGLAYLLWYYA 235 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cccc--ccCCHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 6665 444422222223222 1222 11111111 224556666677777777654
No 19
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.44 E-value=1.3e-12 Score=118.89 Aligned_cols=222 Identities=17% Similarity=0.213 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018824 114 FFMWYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNV 191 (350)
Q Consensus 114 ~~~W~~~s~~~~i~nK~il~~--fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~ 191 (350)
++.|.+.++.+++.||++++. |+--+.+.+.|-.++.+.+.+....|+.+ ++.++.|.++|++++.+.-+..+.-
T Consensus 11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~---fR~t~aK~WfpiSfLLv~MIyt~SK 87 (309)
T COG5070 11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE---FRLTKAKKWFPISFLLVVMIYTSSK 87 (309)
T ss_pred HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh---eehhhhhhhcCHHHHHHHHHHhccc
Confidence 455667889999999999985 66567788889998888666555444333 2345677889999998888888899
Q ss_pred HhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc--------cccHHHHHHHHHHHHH
Q 018824 192 SFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNIS 263 (350)
Q Consensus 192 sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~--------~f~~~G~~lal~S~l~ 263 (350)
+++|.+++.+++.|.++.+.++..+.+++|.|.+.....+.++.+.--..+.++|. .+| .|++|+....++
T Consensus 88 sLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncls 166 (309)
T COG5070 88 SLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLS 166 (309)
T ss_pred ceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHh
Confidence 99999999999999999999999999999999999999999999999888888886 344 599999999999
Q ss_pred HHHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824 264 FTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV 341 (350)
Q Consensus 264 ~A~~~Vl~kk~~--~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~ 341 (350)
.+.+....||.. .+....+-++|...++..+++.+.+++|.... .+..+.+ .......++.+|++.+.-..+
T Consensus 167 saafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~--~n~annl----~~d~l~am~ISgl~svgiSy~ 240 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSP--GNLANNL----SVDSLMAMFISGLCSVGISYC 240 (309)
T ss_pred HHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCc--chhhcCC----ChHHHHHHHHHHHHHhhhhhc
Confidence 999988888754 35567788899999999999999999886442 2222211 113345678899988877666
Q ss_pred HHHH
Q 018824 342 CILL 345 (350)
Q Consensus 342 sf~~ 345 (350)
+=+|
T Consensus 241 saWc 244 (309)
T COG5070 241 SAWC 244 (309)
T ss_pred ccee
Confidence 5443
No 20
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.25 E-value=1.3e-10 Score=95.40 Aligned_cols=117 Identities=16% Similarity=0.299 Sum_probs=97.1
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCChHHHHHHHHHHHH-HHHHHHHHHHHhhhcchHHHH
Q 018824 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVSFTH 202 (350)
Q Consensus 125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~-~~~~~l~~~~~i~~~~~~~ll~lgl~-~~l~~~~~n~sl~~vsvs~~~ 202 (350)
.+++|...++++ |....++|+.++.+ +.+ ....+..+..+.+++++...+..+++ ...+..+.+.++++.+++..+
T Consensus 7 ~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 84 (126)
T PF00892_consen 7 SVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVS 84 (126)
T ss_pred HHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHH
Confidence 467899999876 99999999999986 432 22222122245566778888888887 467889999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
++..++|+++.+++++++||+++++++.++++++.|+.++.
T Consensus 85 ~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 85 ILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998764
No 21
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.18 E-value=5.5e-10 Score=108.47 Aligned_cols=171 Identities=18% Similarity=0.238 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc-----
Q 018824 173 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----- 247 (350)
Q Consensus 173 ~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~----- 247 (350)
+..+..+.+..+.++++|.|+.+++++..+++.++.-+|+..++.+|..||+++.|.+++++.++||++++.+|.
T Consensus 160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~ 239 (416)
T KOG2765|consen 160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD 239 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc
Confidence 445666667778899999999999999999999999999999999999999999999999999999999887743
Q ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhc
Q 018824 248 ---SFNWTGFISAMISNISFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG 320 (350)
Q Consensus 248 ---~f~~~G~~lal~S~l~~A~~~Vl~kk~~~----~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g 320 (350)
+-...|.++++++++.||.|.++.||... ++|--.+..|..++.++++.|..++.+.... +.+.-+-+...
T Consensus 240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~--e~F~lP~~~q~ 317 (416)
T KOG2765|consen 240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE--ERFELPSSTQF 317 (416)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc--CcccCCCCcee
Confidence 12378999999999999999999999773 4677778899999999999988777643211 11110100011
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 018824 321 MVKFISDLFWVGMFYHLYNQVCILL 345 (350)
Q Consensus 321 ~~~~~~~l~~sGl~~~lyn~~sf~~ 345 (350)
...+..+++-+=+.=|+|-...+|+
T Consensus 318 ~~vv~~~ligtvvSDylW~~a~~lT 342 (416)
T KOG2765|consen 318 SLVVFNNLIGTVVSDYLWAKAVLLT 342 (416)
T ss_pred EeeeHhhHHHHHHHHHHHHHHHHhc
Confidence 1123334444555666666666554
No 22
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.18 E-value=3.6e-09 Score=99.38 Aligned_cols=140 Identities=16% Similarity=0.230 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc--
Q 018824 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-- 247 (350)
Q Consensus 170 ~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~-- 247 (350)
++.......+++|.+.+.+.+.++++++++.+|+++.+..+++++++++++|+|++.++|.++++.++|+.+...++.
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 455567777888999988999999999999999999999999999999999999999999999999999998754221
Q ss_pred -------cc--------cHHHHHHHHHHHHHHHHHHHHHhhhccC--CCHHHHHHHHHHHHHHHHHHHHHHhcCchhhh
Q 018824 248 -------SF--------NWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIK 309 (350)
Q Consensus 248 -------~f--------~~~G~~lal~S~l~~A~~~Vl~kk~~~~--l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~ 309 (350)
+. ...|+++.+++.++.++..|+.+|.+|+ .+.+......+.+|.++.++.....|+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~ 173 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISE 173 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 11 2589999999999999999999999865 45556666667788888777766655544433
No 23
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.12 E-value=1.2e-08 Score=97.93 Aligned_cols=165 Identities=18% Similarity=0.187 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcCCCCCCCC-hHHHHHHHHHHHHHHHHHHH
Q 018824 111 GFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPID-SKLLKLLIPVAVCHALGHVT 188 (350)
Q Consensus 111 ~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l~~~~~i~-~~~~~~ll~lgl~~~l~~~~ 188 (350)
.+-+++|+.... ..|++. .++.++.+ |..++.+++... ...+. ++.+ ++.+..-+.-|++...++.+
T Consensus 7 lia~~~wGs~g~----~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~---~~~~~~~~~~~g~l~G~~w~ig~~~ 75 (290)
T TIGR00776 7 LIPALFWGSFVL----INVKIG-GGPYSQTL---GTTFGALILSIAIAIFVL---PEFWALSIFLVGLLSGAFWALGQIN 75 (290)
T ss_pred HHHHHHHhhhHH----HHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhC---CcccccHHHHHHHHHHHHHHhhhhh
Confidence 445666766543 446554 45533332 677777754322 22221 1122 33344445556667788899
Q ss_pred HHHHhhhcchHHHHHHHh-hhHHHHHHHHHHHcCccCChhH----HHHHHHHHHhhhhhcccccc-------cc-HHHHH
Q 018824 189 SNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTL----WLSLAPVVIGVSMASLTELS-------FN-WTGFI 255 (350)
Q Consensus 189 ~n~sl~~vsvs~~~iika-~~Pifv~lls~lflkEr~t~~~----ilsllliv~GV~l~~~~e~~-------f~-~~G~~ 255 (350)
...++++++++.+..+.+ +.|+++.+.+.+++||+.+.++ +++++++++|+.+....+.+ .+ ..|.+
T Consensus 76 ~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~ 155 (290)
T TIGR00776 76 QFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGIL 155 (290)
T ss_pred HHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHH
Confidence 999999999999988877 8889999999999999999999 99999999999987543211 34 68999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHH
Q 018824 256 SAMISNISFTYRSIYSKKAMTDMDSTNIYAYIS 288 (350)
Q Consensus 256 lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~ 288 (350)
++++|.++|+.|.+..|+. ++||.+....+.
T Consensus 156 ~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~ 186 (290)
T TIGR00776 156 LLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQA 186 (290)
T ss_pred HHHHHHHHHHHHHHHHHHc--CCCcceehhHHH
Confidence 9999999999999999986 478887744443
No 24
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.05 E-value=5.2e-11 Score=111.04 Aligned_cols=188 Identities=15% Similarity=0.112 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 018824 110 TGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTS 189 (350)
Q Consensus 110 ~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~ 189 (350)
+....+. |++|..+.+..|...+ .|..+.-.|+++-.+...++........ --++...++++.-|+..+.+.+..
T Consensus 40 l~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~v-~gp~g~R~~LiLRg~mG~tgvmlm 114 (346)
T KOG4510|consen 40 LLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQPV-IGPEGKRKWLILRGFMGFTGVMLM 114 (346)
T ss_pred ceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeeee-ecCCCcEEEEEeehhhhhhHHHHH
Confidence 3334444 4556666666665544 4888888886655554433221111110 012223455677788888888888
Q ss_pred HHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc-----cc---------cccHHHHH
Q 018824 190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-----EL---------SFNWTGFI 255 (350)
Q Consensus 190 n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~-----e~---------~f~~~G~~ 255 (350)
++|++|.+.+.+.+|..++|.|+.++++.++||++++...++.++.+.||+++... |. +.+..|-.
T Consensus 115 yya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~ 194 (346)
T KOG4510|consen 115 YYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTV 194 (346)
T ss_pred HHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchH
Confidence 99999999999999999999999999999999999999999999999999998642 21 23457888
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHh
Q 018824 256 SAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIV 302 (350)
Q Consensus 256 lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~ 302 (350)
.++.+++.-+--.++.|+.-++.|......|.+.++++.-+......
T Consensus 195 aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~i 241 (346)
T KOG4510|consen 195 AAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASI 241 (346)
T ss_pred HHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhc
Confidence 88888887777777888877787777666777777777665554443
No 25
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.99 E-value=1.2e-07 Score=88.17 Aligned_cols=173 Identities=17% Similarity=0.208 Sum_probs=138.3
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHh
Q 018824 127 LNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKA 206 (350)
Q Consensus 127 ~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika 206 (350)
+.|.++..+. |.-++.+|..++.++++..+. +.+.+++++++..++..|+....-+...+.|++.++.+.+..+-.
T Consensus 30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~R---Pwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF 105 (292)
T COG5006 30 FAKSLFPLVG-AAGVTALRLAIAALILLALFR---PWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF 105 (292)
T ss_pred HHHHHccccC-hhhHHHHHHHHHHHHHHHHhh---HHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence 5688877776 899999999999998765542 334567888999999999987777778889999999999999999
Q ss_pred hhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc-c--cccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHH
Q 018824 207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL-T--ELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNI 283 (350)
Q Consensus 207 ~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~-~--e~~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l 283 (350)
+-|+.+.+++ -+|..--.| +.+.+.|..+..- + ..+.|..|..+++.+..||+.|.+..||.-+..+...-
T Consensus 106 ~GPL~vA~~~----sRr~~d~vw--vaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g 179 (292)
T COG5006 106 TGPLAVALLS----SRRLRDFVW--VALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAG 179 (292)
T ss_pred ccHHHHHHHh----ccchhhHHH--HHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchH
Confidence 9999887654 344444455 4457788877532 2 24678999999999999999999999998766777788
Q ss_pred HHHHHHHHHHHHHHHHHHhcCchhhh
Q 018824 284 YAYISIIALFVCIPPAIIVEGPQLIK 309 (350)
Q Consensus 284 ~~~~~~~s~l~Llp~al~~Eg~~~~~ 309 (350)
+.+-+.++.++.+|+....-++.+..
T Consensus 180 ~a~gm~vAaviv~Pig~~~ag~~l~~ 205 (292)
T COG5006 180 VAVGMLVAALIVLPIGAAQAGPALFS 205 (292)
T ss_pred HHHHHHHHHHHHhhhhhhhcchhhcC
Confidence 88889999999999988766665543
No 26
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.93 E-value=1.2e-08 Score=93.98 Aligned_cols=165 Identities=13% Similarity=0.130 Sum_probs=131.4
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHH
Q 018824 135 FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAA 214 (350)
Q Consensus 135 fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~l 214 (350)
|.+...+.++|+.+..++.-+... ++++.++++..-+.....++-+.+..+.+|.++++++-+...+-|++-|+-+++
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~--ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi 127 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFL--IRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI 127 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhhee--ecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence 778889999999998887644332 234344444444556677777888899999999999999888889999999999
Q ss_pred HHHHHcCccCChhHHHHHHHHHHhhhhhccccc-------cccHHHHHHHHHHHHHHHHHHHHHhhhccCC--CHHHHHH
Q 018824 215 ASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------SFNWTGFISAMISNISFTYRSIYSKKAMTDM--DSTNIYA 285 (350)
Q Consensus 215 ls~lflkEr~t~~~ilsllliv~GV~l~~~~e~-------~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l--~~~~l~~ 285 (350)
+++++.|++.+|++++.++++++||++..+.|. .....|-++.+.|-...++....+.|....+ +...++.
T Consensus 128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~ 207 (337)
T KOG1580|consen 128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMF 207 (337)
T ss_pred eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHH
Confidence 999999999999999999999999999877542 1124799999999998999888888766443 4567889
Q ss_pred HHHHHHHHHHHHHHHH
Q 018824 286 YISIIALFVCIPPAII 301 (350)
Q Consensus 286 ~~~~~s~l~Llp~al~ 301 (350)
|+++++.+.+-.-.++
T Consensus 208 ~~NlwStL~Lg~g~lf 223 (337)
T KOG1580|consen 208 YTNLWSTLYLGAGLLF 223 (337)
T ss_pred HHHHHHHHHhhhhhee
Confidence 9999999887665444
No 27
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.91 E-value=1.1e-08 Score=84.64 Aligned_cols=105 Identities=19% Similarity=0.314 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHH-HHHhcCCCC--CCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHH
Q 018824 143 VIHLLVGVVYCLV-SWAVGLPKR--APIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF 218 (350)
Q Consensus 143 ~~r~~ia~l~ll~-~~~~~l~~~--~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~l 218 (350)
.+|+.++.+++.. ....+..++ +...++.+......|++.. .+..+.++|+++.+ +....+.+++|+|+++++.+
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 4688887776543 222211110 1122234556666677664 67888899999999 58889999999999999999
Q ss_pred HcCccCChhHHHHHHHHHHhhhhhcccccc
Q 018824 219 ILGQQLPLTLWLSLAPVVIGVSMASLTELS 248 (350)
Q Consensus 219 flkEr~t~~~ilsllliv~GV~l~~~~e~~ 248 (350)
++|||++++++.+++++++|+.++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999877654
No 28
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.90 E-value=8.8e-08 Score=90.25 Aligned_cols=173 Identities=17% Similarity=0.279 Sum_probs=130.1
Q ss_pred HHHHHHHHh-------cCCcHHHHHHHHHHHHHHHHH-HHHHhcCCCC-C-------CC-ChH----HHHHHHHHHHHHH
Q 018824 125 NILNKRIYN-------YFPYPYFVSVIHLLVGVVYCL-VSWAVGLPKR-A-------PI-DSK----LLKLLIPVAVCHA 183 (350)
Q Consensus 125 ~i~nK~il~-------~fp~P~~lt~~r~~ia~l~ll-~~~~~~l~~~-~-------~i-~~~----~~~~ll~lgl~~~ 183 (350)
++..||.-+ .|.+|+..+ .-++.+-..|+ ++...+.+.. + .+ +.+ +.+.++|-++|-.
T Consensus 19 tl~aKwadsi~~eg~pgfqhpvlqa-l~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di 97 (372)
T KOG3912|consen 19 TLVAKWADSIQAEGSPGFQHPVLQA-LLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDI 97 (372)
T ss_pred HHHHHHHHhhhhhCCCccccHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHH
Confidence 467788755 166787665 45555654443 2222221110 0 01 111 2345677888888
Q ss_pred HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc----------cccHHH
Q 018824 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----------SFNWTG 253 (350)
Q Consensus 184 l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~----------~f~~~G 253 (350)
.+...-+.++.+++++.+|+++....+|+.+++..|++++++.++|++++.+.+|++.+...|. +.-..|
T Consensus 98 ~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitG 177 (372)
T KOG3912|consen 98 AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITG 177 (372)
T ss_pred hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhh
Confidence 8777779999999999999999999999999999999999999999999999999998765542 112689
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHH
Q 018824 254 FISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPP 298 (350)
Q Consensus 254 ~~lal~S~l~~A~~~Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~ 298 (350)
+.+.+++.+.-|.+.++.+|..+ +++|.+...|..++|.+++-..
T Consensus 178 dllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL 224 (372)
T KOG3912|consen 178 DLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLL 224 (372)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHH
Confidence 99999999999999999888775 5789999999999996665433
No 29
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.88 E-value=2.2e-08 Score=84.10 Aligned_cols=119 Identities=20% Similarity=0.268 Sum_probs=98.0
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH-HHHhcC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 018824 124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (350)
Q Consensus 124 ~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~-~~~~~l-~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~ 201 (350)
..++.|..+++.+ |.+-+++|-.+...++.. ....|. ...-.++++.|..+..-|+...++..+++.+++...+|..
T Consensus 18 ~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~V 96 (140)
T COG2510 18 TPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRV 96 (140)
T ss_pred HHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceE
Confidence 4589999999875 999999999988876643 333231 1122356777877777787777888999999999999988
Q ss_pred HHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 202 ~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
.-+-.+.|+++++++++|+|||++..+|+|++++++|+.+.+
T Consensus 97 vPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 97 VPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred EEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 888899999999999999999999999999999999998865
No 30
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.85 E-value=8.9e-07 Score=84.36 Aligned_cols=162 Identities=11% Similarity=0.049 Sum_probs=135.2
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHH
Q 018824 135 FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAA 214 (350)
Q Consensus 135 fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~l 214 (350)
|.+|.++.+.|-+++.++-.. +.. ..+.+...++.|.....+++.+.++-.++..|++|++-+.-.+.|++--+-+++
T Consensus 48 F~~~~fL~~~q~l~~~~~s~~-~l~-~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 48 FEHSLFLVFCQRLVALLVSYA-MLK-WWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccccHHHHHHHHHHHHHHHHH-HHh-cccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 778999999998888776432 221 122223334567788899999999999999999999999988999999999999
Q ss_pred HHHHHcCccCChhHHHHHHHHHHhhhhhccccc---------cccHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHH
Q 018824 215 ASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNI 283 (350)
Q Consensus 215 ls~lflkEr~t~~~ilsllliv~GV~l~~~~e~---------~f~~~G~~lal~S~l~~A~~~Vl~kk~~~--~l~~~~l 283 (350)
++.++.|+|++..+++..+++.+||.+....+. +...+|+.++...-+..++.+..++++.+ ++++.++
T Consensus 126 mg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~m 205 (327)
T KOG1581|consen 126 MGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHM 205 (327)
T ss_pred HHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHH
Confidence 999999999999999999999999998654321 23479999999999999999999999875 5899999
Q ss_pred HHHHHHHHHHHHHHH
Q 018824 284 YAYISIIALFVCIPP 298 (350)
Q Consensus 284 ~~~~~~~s~l~Llp~ 298 (350)
+++.++++++.....
T Consensus 206 M~~vNLf~~i~~~~~ 220 (327)
T KOG1581|consen 206 MFGVNLFSAILNGTY 220 (327)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988776
No 31
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.70 E-value=1.6e-07 Score=80.59 Aligned_cols=96 Identities=29% Similarity=0.396 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-------CCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhc-hHHH
Q 018824 253 GFISAMISNISFTYRSIYSKKAMT-------DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG-MVKF 324 (350)
Q Consensus 253 G~~lal~S~l~~A~~~Vl~kk~~~-------~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g-~~~~ 324 (350)
|++++++|+++.++|+++.|+.++ +.|+.++++|+++.+.++++|.+++.|+++.........-.+.+ ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 789999999999999999998763 47899999999999999999999999998865522211101122 3467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 018824 325 ISDLFWVGMFYHLYNQVCILLTCC 348 (350)
Q Consensus 325 ~~~l~~sGl~~~lyn~~sf~~l~~ 348 (350)
+..++.+|+..+++|.++|++++.
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~ 104 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKL 104 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 888999999999999999999875
No 32
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.64 E-value=2.1e-05 Score=74.88 Aligned_cols=180 Identities=15% Similarity=0.204 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcCCCC-CC--CChHHHHHHHHHHHHHHHHHH
Q 018824 112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKR-AP--IDSKLLKLLIPVAVCHALGHV 187 (350)
Q Consensus 112 ~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l~~~-~~--i~~~~~~~ll~lgl~~~l~~~ 187 (350)
.--.+|+.. .++.|.+.. .| +..+...|.+-+..++... ...|..+. .. -+++.+..+...+++-+.+.+
T Consensus 14 ~Ay~lwG~l----p~y~kll~~-~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~ 87 (293)
T COG2962 14 LAYLLWGLL----PLYFKLLEP-LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWW 87 (293)
T ss_pred HHHHHHHHH----HHHHHHHcc-CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 344556554 345666544 45 8889899999888765432 22111110 00 011233334444444444555
Q ss_pred HHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccccccHHHHHHHHHHHHHHHHH
Q 018824 188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYR 267 (350)
Q Consensus 188 ~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~~f~~~G~~lal~S~l~~A~~ 267 (350)
...+|..+..+-.++.=....|++.++++.+|+|||+++.|++++.+..+||..-.....++.|..+.+ +++|++|
T Consensus 88 lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~Y 163 (293)
T COG2962 88 LFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGLY 163 (293)
T ss_pred HhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHHH
Confidence 556666665555666667899999999999999999999999999999999998766556777765544 5689999
Q ss_pred HHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 018824 268 SIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVE 303 (350)
Q Consensus 268 ~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~E 303 (350)
...-|+. ++|+.+-...-.++-....+.+.++.|
T Consensus 164 gl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~ 197 (293)
T COG2962 164 GLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLA 197 (293)
T ss_pred HHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHh
Confidence 9876664 566665554443333333333333333
No 33
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.60 E-value=3.6e-06 Score=78.33 Aligned_cols=114 Identities=20% Similarity=0.121 Sum_probs=87.7
Q ss_pred HHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHHhhhcchHHHH
Q 018824 125 NILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVSFTH 202 (350)
Q Consensus 125 ~i~nK~il~~fp-~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~-~l~~~~~n~sl~~vsvs~~~ 202 (350)
.++.|+..++.+ .+..+..+++.++.+++.+..... .+....+.+++..++..+++. ..+..+.+.++++.+++.++
T Consensus 144 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s 222 (260)
T TIGR00950 144 TVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFL-GPNPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAAS 222 (260)
T ss_pred HHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 467888877654 234555578888877665432211 122233556676677777765 46788899999999999999
Q ss_pred HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhh
Q 018824 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239 (350)
Q Consensus 203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV 239 (350)
++..++|++.++++++++||+++..++.|..+++.|+
T Consensus 223 ~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 223 ILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999986
No 34
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.57 E-value=2.3e-05 Score=76.42 Aligned_cols=137 Identities=15% Similarity=0.236 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc---
Q 018824 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--- 247 (350)
Q Consensus 171 ~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~--- 247 (350)
+..++...+++|++.+-+...++.+.+.+.+++...+-.+.++++..+++++|.+++||.++++.+.|+.+...++.
T Consensus 91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~ 170 (345)
T KOG2234|consen 91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT 170 (345)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 44456666778888766889999999999999999999999999999999999999999999999999999863211
Q ss_pred -------c-ccHHHHHHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHhcCchh
Q 018824 248 -------S-FNWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQL 307 (350)
Q Consensus 248 -------~-f~~~G~~lal~S~l~~A~~~Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~ 307 (350)
+ -.+.|+...+.+.++.++-.+|.+|.++ +.+-+....-.+.+|.++.+...+..|+...
T Consensus 171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i 240 (345)
T KOG2234|consen 171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAI 240 (345)
T ss_pred CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 1 1378999999999999999999999985 4555555555566777776666666665544
No 35
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.47 E-value=1.7e-06 Score=81.44 Aligned_cols=196 Identities=17% Similarity=0.198 Sum_probs=146.6
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhc--CC-cHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCChHHHHHHHHH
Q 018824 103 DRYPALVTGFFFFMWYFLNVIFNILNKRIYNY--FP-YPYFVSVIHLLVGVVYCLVSWAVGLP-KRAPIDSKLLKLLIPV 178 (350)
Q Consensus 103 ~~~~~l~~~~~~~~W~~~s~~~~i~nK~il~~--fp-~P~~lt~~r~~ia~l~ll~~~~~~l~-~~~~i~~~~~~~ll~l 178 (350)
+|.+..+..+.....++.-........++++. |. +-|.+++.|+++=..+.++ ....+. ++..++ |+....+
T Consensus 37 ~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~gli-e~~~~~~k~r~iP---~rtY~~l 112 (367)
T KOG1582|consen 37 DKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLI-ELQLIQTKRRVIP---WRTYVIL 112 (367)
T ss_pred cCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhhe-EEEeecccceecc---hhHhhhh
Confidence 33444455555555555555555666777764 54 7899999999876543322 111122 222233 5666777
Q ss_pred HHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc----ccccHHHH
Q 018824 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----LSFNWTGF 254 (350)
Q Consensus 179 gl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e----~~f~~~G~ 254 (350)
+.+-...+.++|-|+.|++-+.-.+.|.+--+-+++.+.++-++|.++..+.+..+..+|.++....| .+||..|+
T Consensus 113 a~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv 192 (367)
T KOG1582|consen 113 AFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGV 192 (367)
T ss_pred HhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeH
Confidence 77777778899999999999988888999988899999999999999999999999999999987655 47899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHh
Q 018824 255 ISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIV 302 (350)
Q Consensus 255 ~lal~S~l~~A~~~Vl~kk~~~--~l~~~~l~~~~~~~s~l~Llp~al~~ 302 (350)
++.-.+-++.|+-.-+++|.++ +-++.++..|...+|+++++.+....
T Consensus 193 ~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlT 242 (367)
T KOG1582|consen 193 MMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLT 242 (367)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhc
Confidence 9999999999887777777764 34567888999999999988776654
No 36
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.38 E-value=2.2e-05 Score=75.19 Aligned_cols=116 Identities=20% Similarity=0.251 Sum_probs=84.7
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHHHH
Q 018824 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHT 203 (350)
Q Consensus 125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~~i 203 (350)
++..|+..++.+ |.... +...++.+.+.+..... ......+...+...+.++++.+ +++.+.++++++.+++.+++
T Consensus 164 ~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~ 240 (293)
T PRK10532 164 ILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQ-AGEALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGT 240 (293)
T ss_pred HHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHc-cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHH
Confidence 356677766554 66654 44455555443322211 1112234445555567777654 46788899999999999999
Q ss_pred HHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 204 ika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
+..++|++..++++++++|+++..+++|..++++|+....
T Consensus 241 ~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 241 LMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998764
No 37
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.38 E-value=2.1e-05 Score=77.93 Aligned_cols=120 Identities=14% Similarity=0.147 Sum_probs=85.8
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH-HHHh-cCCCC---CCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchH
Q 018824 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAV-GLPKR---APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (350)
Q Consensus 125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~-~~~~-~l~~~---~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs 199 (350)
++..|.....+|.+...++++..++.+.+.+ .... +.... ...+.. ...++..+++-.++.++.|+++++.+++
T Consensus 205 ~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t~lay~lw~~~v~~~ga~ 283 (358)
T PLN00411 205 FILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAIITSVYYVIHSWTVRHKGPL 283 (358)
T ss_pred HHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHHHHHHHHHHHHHHhccCch
Confidence 3566777677775667777888877765432 2221 11000 011212 1123334444445677889999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc
Q 018824 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (350)
Q Consensus 200 ~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~ 245 (350)
.+.+...++|+|.+++++++++|++++.+++|.++++.|+.++..+
T Consensus 284 ~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 284 YLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999987643
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.34 E-value=1.4e-06 Score=78.55 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc--cc
Q 018824 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--SF 249 (350)
Q Consensus 172 ~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~--~f 249 (350)
.++..|.+++.+..++.+..+++.++.+.++-+.++.-.|+.+++++++|+|+..-++++.++.+.|++++++-|. ..
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 4456788888888888999999999999999999999999999999999999999999999999999999887553 34
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHH
Q 018824 250 NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIA 291 (350)
Q Consensus 250 ~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s 291 (350)
++.|..++++|++..++|.|+.|+...+-+--+...+++..+
T Consensus 133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LG 174 (290)
T KOG4314|consen 133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLG 174 (290)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHH
Confidence 689999999999999999999999886543333333334333
No 39
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.32 E-value=2.8e-05 Score=74.39 Aligned_cols=118 Identities=16% Similarity=0.142 Sum_probs=88.4
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH-HHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHHHH
Q 018824 126 ILNKRIYNYFPYPYFVSVIHLLVGVVYCLVS-WAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHT 203 (350)
Q Consensus 126 i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~-~~~~l~~~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~~i 203 (350)
+.+|..-.. ++...+.+++.++...+.+. +..+.......+.+.|..++..+++.+ ++..+.+.++++.+++...+
T Consensus 167 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~ 244 (292)
T PRK11272 167 VWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATS 244 (292)
T ss_pred HHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Confidence 556665332 35566778888887765432 221111111124456777777777644 57788999999999999999
Q ss_pred HHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc
Q 018824 204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (350)
Q Consensus 204 ika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~ 245 (350)
+..++|++.++++++++||+++..+++|.++++.|+.+....
T Consensus 245 ~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 245 YAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887543
No 40
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.28 E-value=3.3e-05 Score=64.01 Aligned_cols=64 Identities=16% Similarity=0.231 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (350)
Q Consensus 181 ~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~ 244 (350)
++..+..+...++++++++.+..+-++.++++.+++++++|||++.++++|+.++++|+.++..
T Consensus 46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3556778888999999999999999999999999999999999999999999999999988753
No 41
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.28 E-value=3.2e-05 Score=74.16 Aligned_cols=116 Identities=14% Similarity=0.183 Sum_probs=82.5
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHH
Q 018824 124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH 202 (350)
Q Consensus 124 ~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~-~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ 202 (350)
.++++|..-++.+ |.... . ..+.+.+.+ ....+ ......+.+.|..++..++...+++++.+.++++.+++.++
T Consensus 171 ~~v~~k~~~~~~~-~~~~~--~-~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s 245 (295)
T PRK11689 171 YCNVTRKYARGKN-GITLF--F-ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLA 245 (295)
T ss_pred HHHHHhhccCCCC-chhHH--H-HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHH
Confidence 3466777655543 55432 2 222232222 22211 11123455566666666665556788999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (350)
Q Consensus 203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~ 244 (350)
++..++|++.+++++++++|+++..+++|.++++.|+.+...
T Consensus 246 ~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 246 TASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999987643
No 42
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=98.07 E-value=8.1e-07 Score=82.88 Aligned_cols=187 Identities=8% Similarity=0.065 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHH
Q 018824 122 VIFNILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 200 (350)
Q Consensus 122 ~~~~i~nK~il~~-fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~ 200 (350)
...++.+.++-+. .+-|..-+++....=++.-.+...+|. +.-+..|+..+.+++.-.-++.+-.-++||++...
T Consensus 31 t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtS 106 (336)
T KOG2766|consen 31 TSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTS 106 (336)
T ss_pred HcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchHH
Confidence 3344666666664 556777666655433332222222221 11123456667777765545555556899999998
Q ss_pred HHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc-------ccc-HHHHHHHHHHHHHHHHHHHHHh
Q 018824 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------SFN-WTGFISAMISNISFTYRSIYSK 272 (350)
Q Consensus 201 ~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~-------~f~-~~G~~lal~S~l~~A~~~Vl~k 272 (350)
.+.+-.-....+++++|+|+|.|..+.++.|++++++||+++...|. ..| ..|+++.++++-+||..|+..+
T Consensus 107 i~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EE 186 (336)
T KOG2766|consen 107 IMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEE 186 (336)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHH
Confidence 88888777777889999999999999999999999999999876553 123 5899999999999999999999
Q ss_pred hhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchh
Q 018824 273 KAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLS 313 (350)
Q Consensus 273 k~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~ 313 (350)
.+-++.|-.+++....++|.++-..= ++.|..+...-+|.
T Consensus 187 flvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~ 226 (336)
T KOG2766|consen 187 FLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWD 226 (336)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeeh
Confidence 88899999999999999999988777 45576665554553
No 43
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.07 E-value=0.00027 Score=67.86 Aligned_cols=121 Identities=18% Similarity=0.213 Sum_probs=85.1
Q ss_pred HHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHH-HHHhcCCC-----CCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhh
Q 018824 125 NILNKRIYNYFPYP--YFVSVIHLLVGVVYCLV-SWAVGLPK-----RAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAA 195 (350)
Q Consensus 125 ~i~nK~il~~fp~P--~~lt~~r~~ia~l~ll~-~~~~~l~~-----~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~ 195 (350)
++..|...++.+.| .....+...++.+.... .+...-.. ....+.+.|..++.++++.+ ++..+.+.++++
T Consensus 159 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~ 238 (299)
T PRK11453 159 NIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGR 238 (299)
T ss_pred HHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45667665544323 34445555555443321 12111111 01234566777777777655 467888999999
Q ss_pred cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc
Q 018824 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (350)
Q Consensus 196 vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~ 245 (350)
.+...+.++..++|++..++++++++|+++..+++|..++++|+.+...+
T Consensus 239 ~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 239 YETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999876543
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.97 E-value=4.3e-05 Score=72.69 Aligned_cols=66 Identities=11% Similarity=0.107 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (350)
Q Consensus 176 l~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l 241 (350)
...++...+++.+.+.++++.+++....+..++|++..+++++++||+++..+++|..++++|+.+
T Consensus 215 ~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 215 TLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 333344556788999999999999999999999999999999999999999999999999999875
No 45
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.96 E-value=0.00037 Score=66.86 Aligned_cols=70 Identities=10% Similarity=0.114 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 174 ~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
.+...++...+++.+.+.++++.+.+.++.+...+|++..++++++++|+++..++.|..+++.|+.+..
T Consensus 215 ~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 215 LLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3444555555788999999999999999999999999999999999999999999999999998887764
No 46
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=97.96 E-value=1.2e-05 Score=75.99 Aligned_cols=164 Identities=16% Similarity=0.200 Sum_probs=117.3
Q ss_pred HHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhh-cchHHHHH
Q 018824 127 LNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTHT 203 (350)
Q Consensus 127 ~nK~il~~fp-~P~~lt~~r~~ia~l~ll~~~~~~l-~~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~-vsvs~~~i 203 (350)
+-..+.++.| .--.+++.|+++-+.--++.. .+. ..+++++.+++. ..++ ++...++++|+++++ ++++.+.+
T Consensus 21 ~lE~L~~~~pgsgNLITFaqFlFia~eGlif~-skf~~~k~kiplk~Y~--i~V~-mFF~vnv~NN~al~f~I~~PlHiI 96 (330)
T KOG1583|consen 21 FLELLVRNEPGSGNLITFAQFLFIATEGLIFT-SKFFTVKPKIPLKDYA--ITVA-MFFIVNVTNNYALKFNIPMPLHII 96 (330)
T ss_pred HHHHHHHhCCCCeeehHHHHHHHHHHhceeee-ccccccCCCCchhhhh--eehh-eeeeeeeeccceeeecccceEEEE
Confidence 3445555555 335788888887666433321 111 122455554442 2333 344556889999997 89999999
Q ss_pred HHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc---cc--------------ccc--HHHHHHHHHHHHHH
Q 018824 204 IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---EL--------------SFN--WTGFISAMISNISF 264 (350)
Q Consensus 204 ika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~---e~--------------~f~--~~G~~lal~S~l~~ 264 (350)
+++..++.+++++++++|+|.+.+|+.+++++.+|+.+.+.. |. ++- ..|+.+...+.+..
T Consensus 97 fRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~s 176 (330)
T KOG1583|consen 97 FRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLS 176 (330)
T ss_pred EecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999986532 21 111 25888888888999
Q ss_pred HHHHHHHhhhccC--CCHHHHHHHHHHHHHHH
Q 018824 265 TYRSIYSKKAMTD--MDSTNIYAYISIIALFV 294 (350)
Q Consensus 265 A~~~Vl~kk~~~~--l~~~~l~~~~~~~s~l~ 294 (350)
|...++++..-++ -++-+.++|...++...
T Consensus 177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~ 208 (330)
T KOG1583|consen 177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPL 208 (330)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhccch
Confidence 9988888876654 46788999998766543
No 47
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.93 E-value=9.7e-05 Score=70.86 Aligned_cols=121 Identities=10% Similarity=0.065 Sum_probs=82.2
Q ss_pred HHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHHH-hcCCCCCC---------CChH-HHHHHHHHHH-HHHHHHHH
Q 018824 123 IFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRAP---------IDSK-LLKLLIPVAV-CHALGHVT 188 (350)
Q Consensus 123 ~~~i~nK~il~--~fp~P~~lt~~r~~ia~l~ll~~~~-~~l~~~~~---------i~~~-~~~~ll~lgl-~~~l~~~~ 188 (350)
...++.|...+ +.+ |..++.+++.++.+.+.+... ........ .... .+...+..++ ++...+..
T Consensus 159 ~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T TIGR00817 159 SRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQV 237 (302)
T ss_pred HHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHH
Confidence 34567787776 454 888899999888876654322 11100000 0000 0111112222 22223345
Q ss_pred HHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (350)
Q Consensus 189 ~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~ 244 (350)
.+.+++++++..+++.....|++++++++++++|+++..+++|..++++|+.+...
T Consensus 238 ~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 238 AFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999988653
No 48
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.84 E-value=0.0013 Score=56.21 Aligned_cols=124 Identities=13% Similarity=0.148 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHhc------CCcHHHHHHHHHHHHHHHHHHHHHh-cCCCC----C-----CC--ChHHHHHHHHHHH
Q 018824 119 FLNVIFNILNKRIYNY------FPYPYFVSVIHLLVGVVYCLVSWAV-GLPKR----A-----PI--DSKLLKLLIPVAV 180 (350)
Q Consensus 119 ~~s~~~~i~nK~il~~------fp~P~~lt~~r~~ia~l~ll~~~~~-~l~~~----~-----~i--~~~~~~~ll~lgl 180 (350)
.+....+++.|..+++ -.+|+.+....-..+.+++.+.+.. ...+. . +. +.+.+..++..++
T Consensus 10 ~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
T PF03151_consen 10 LFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL 89 (153)
T ss_pred HHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence 3344455677777765 2358888777777777766544321 11110 0 00 1233445556666
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (350)
Q Consensus 181 ~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~ 242 (350)
+....++..+..++++++-.++++...--+++.++++++++|+++..++.|+++.++|+.+-
T Consensus 90 ~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 90 LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 66677888899999999999999999999999999999999999999999999999998764
No 49
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.80 E-value=0.0025 Score=60.70 Aligned_cols=124 Identities=19% Similarity=0.229 Sum_probs=97.1
Q ss_pred CCCCh--HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHH----HHHHHHH
Q 018824 165 APIDS--KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWL----SLAPVVI 237 (350)
Q Consensus 165 ~~i~~--~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~il----sllliv~ 237 (350)
+.++. +.+..-+.-|++.++++.....|+++..+|.+.=+ ..+.-+.+.++++++++|-.+..++. +++++++
T Consensus 36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liii 115 (269)
T PF06800_consen 36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIII 115 (269)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHH
Confidence 44543 56777788899999999999999999999887655 46667779999999999977765544 8889999
Q ss_pred hhhhhccccccc-------c-HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHH
Q 018824 238 GVSMASLTELSF-------N-WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISII 290 (350)
Q Consensus 238 GV~l~~~~e~~f-------~-~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~ 290 (350)
|+.+.+..|.+. | ..|....+++.+.|..|.++.|- .++|+++...=+++-
T Consensus 116 Gv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiG 174 (269)
T PF06800_consen 116 GVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIG 174 (269)
T ss_pred HHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHH
Confidence 999988755311 2 46999999999999999999776 467888777655443
No 50
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.79 E-value=0.0022 Score=59.65 Aligned_cols=118 Identities=28% Similarity=0.381 Sum_probs=85.8
Q ss_pred HHHHHHHHHhcCCcHHHHHH-HHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHH
Q 018824 124 FNILNKRIYNYFPYPYFVSV-IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFT 201 (350)
Q Consensus 124 ~~i~nK~il~~fp~P~~lt~-~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~ 201 (350)
..+.+|... +.+ +..... +++............ .... .+.+.+++..+...+++.+ .++.+.+.+++..+++..
T Consensus 169 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 244 (292)
T COG0697 169 YTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV 244 (292)
T ss_pred HHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 446777666 332 545554 454422222222221 1111 2345567888888888877 488899999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccc
Q 018824 202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (350)
Q Consensus 202 ~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~ 245 (350)
.++..++|++..++++++++|+++..++.|..+++.|+.+....
T Consensus 245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999887543
No 51
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.58 E-value=0.00063 Score=57.90 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=60.2
Q ss_pred HHHHH-HHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHH--HcCccCChhHHHHHHHHHHhhhhhccc
Q 018824 176 IPVAV-CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF--ILGQQLPLTLWLSLAPVVIGVSMASLT 245 (350)
Q Consensus 176 l~lgl-~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~l--flkEr~t~~~ilsllliv~GV~l~~~~ 245 (350)
+..|+ ++.++.++.+.++++.+++.+.-+-+..+.++.+.++. ++||++++.+++|++++++|+.++..+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 34444 45667889999999999999999989999888888885 899999999999999999999998654
No 52
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.58 E-value=0.0015 Score=62.80 Aligned_cols=126 Identities=12% Similarity=0.173 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH---HHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHH
Q 018824 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLL---VGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHAL 184 (350)
Q Consensus 108 l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~---ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~l 184 (350)
+..++...+-|.. +.+.+|.. + + .|...++.|.. ++.++....+ + +.++ ...+.....+..|+++.+
T Consensus 154 i~~~l~sg~~y~~---~~~~~~~~-~-~-~~~~~~~~~~~g~~~~~~~~~~~~--~-~~~~-~~~~~~~~~~~~Gi~~~i 223 (290)
T TIGR00776 154 ILLLLMSTIGYLV---YVVVAKAF-G-V-DGLSVLLPQAIGMVIGGIIFNLGH--I-LAKP-LKKYAILLNILPGLMWGI 223 (290)
T ss_pred HHHHHHHHHHHHH---HHHHHHHc-C-C-CcceehhHHHHHHHHHHHHHHHHH--h-cccc-hHHHHHHHHHHHHHHHHH
Confidence 3344444443333 33566755 2 3 37777555544 3333222222 1 1122 223333344558888877
Q ss_pred HHHHHHHHhh-hcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHH----HHHHHHHHhhhhhc
Q 018824 185 GHVTSNVSFA-AVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMAS 243 (350)
Q Consensus 185 ~~~~~n~sl~-~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~i----lsllliv~GV~l~~ 243 (350)
+..+...+.+ +.+++.+.++.+.+|+...+.+++++||+.+++++ +|.++++.|+.+..
T Consensus 224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 8888889999 99999999999999999999999999999999999 99999999998764
No 53
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.48 E-value=0.0039 Score=61.56 Aligned_cols=121 Identities=15% Similarity=0.084 Sum_probs=78.7
Q ss_pred HHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHHHHH-hcCCC-C-------CCCChHHHH----HHHHHHHHHH
Q 018824 123 IFNILNKRIYNYFP------YPYFVSVIHLLVGVVYCLVSWA-VGLPK-R-------APIDSKLLK----LLIPVAVCHA 183 (350)
Q Consensus 123 ~~~i~nK~il~~fp------~P~~lt~~r~~ia~l~ll~~~~-~~l~~-~-------~~i~~~~~~----~ll~lgl~~~ 183 (350)
..+++.|...++.+ .+..+..+...++.+++++... ....+ . ...+...+. .++.-++.+.
T Consensus 208 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~ 287 (350)
T PTZ00343 208 LRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYY 287 (350)
T ss_pred HHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHH
Confidence 45577888776421 2554555566777776554322 11000 0 001110111 1222233333
Q ss_pred HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 184 l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
+.+...++++++++...+++...+.|+++.++++++++|+++..+++|.+++++|+.+.+
T Consensus 288 l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 288 LYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 334444469999999999999999999999999999999999999999999999998754
No 54
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.32 E-value=0.0036 Score=52.68 Aligned_cols=69 Identities=16% Similarity=0.245 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (350)
Q Consensus 176 l~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~ 244 (350)
...-+++.++.++...++++++++.+.-+ ....-+.+++++++++||++++.+++++.++++|+.++..
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 34444566677888899999999998766 5678899999999999999999999999999999988754
No 55
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.24 E-value=0.0084 Score=49.59 Aligned_cols=66 Identities=15% Similarity=0.204 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824 177 PVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (350)
Q Consensus 177 ~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~ 242 (350)
..-+++.++..+...+++++|++.+--+ ...--+.+.+++++++||++++.++.++.+++.|+...
T Consensus 40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3344455667777889999999988655 55667888999999999999999999999999999875
No 56
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.21 E-value=0.006 Score=50.11 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 176 l~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
+..-+++..+..+...+++.+|++.+--+ ...--+.+.+++++++||++++.++.++.+++.|+..+.
T Consensus 33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 33344566677788889999999988655 556778899999999999999999999999999998764
No 57
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.20 E-value=0.0058 Score=50.62 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824 179 AVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (350)
Q Consensus 179 gl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~ 244 (350)
-+++.++..+...+++++|++.+.-+ ....-+.+.+++++++||++++.++.++.++++|+.++..
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 33455666777889999999998766 4567788899999999999999999999999999998754
No 58
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.09 E-value=0.0056 Score=50.26 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824 178 VAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (350)
Q Consensus 178 lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~ 244 (350)
.-+++..+..+...++++++++.+--+ ...--+.+++.+++++||+.+..+++++.++++|+...-.
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 334455566777889999999988544 6666788999999999999999999999999999987643
No 59
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.84 E-value=0.031 Score=52.69 Aligned_cols=116 Identities=23% Similarity=0.257 Sum_probs=79.8
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHhhhcchHHHH
Q 018824 124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTH 202 (350)
Q Consensus 124 ~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~~~~~~~ll~lgl~~~-l~~~~~n~sl~~vsvs~~~ 202 (350)
+.+..|.+-+.-+-+.. ...-+.+++++.+++-... -...-++++-...-+.++++.+ +-..+...++...+...+.
T Consensus 163 YIv~G~r~g~~~~g~~g-~a~gm~vAaviv~Pig~~~-ag~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~ 240 (292)
T COG5006 163 YIVLGQRAGRAEHGTAG-VAVGMLVAALIVLPIGAAQ-AGPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFG 240 (292)
T ss_pred HHHHcchhcccCCCchH-HHHHHHHHHHHHhhhhhhh-cchhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHH
Confidence 44566666544343333 3467777777665442210 1111123333333445555543 3466888999999999999
Q ss_pred HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (350)
Q Consensus 203 iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l 241 (350)
++.+++|.+-++.++++++|+++..||+++..++.+..-
T Consensus 241 ~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 241 TLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred HHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999887653
No 60
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.40 E-value=0.091 Score=50.55 Aligned_cols=130 Identities=16% Similarity=0.311 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHH-HH--hcC-CCCCCC---ChHHHHHHHHHHHHHHHH
Q 018824 114 FFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVS-WA--VGL-PKRAPI---DSKLLKLLIPVAVCHALG 185 (350)
Q Consensus 114 ~~~W~~~s~~~~i~nK~il~~fp-~P~~lt~~r~~ia~l~ll~~-~~--~~l-~~~~~i---~~~~~~~ll~lgl~~~l~ 185 (350)
..+...+......+.|.++++.+ .|+.+.++.-.++.++.... +. .+. .+..+. .++.+..++..+++...+
T Consensus 159 l~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g 238 (303)
T PF08449_consen 159 LLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALG 238 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 34444445556678888887533 57777777666666654322 22 111 110011 123455666777777777
Q ss_pred HHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 186 HVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 186 ~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
+.+.+.-.+..+.-...++..+--+++.+++.+++++++++.+|.|+++++.|..+-.
T Consensus 239 ~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~ 296 (303)
T PF08449_consen 239 QFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYS 296 (303)
T ss_pred HHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHH
Confidence 7777777788888888899999999999999999999999999999999999988754
No 61
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.18 E-value=0.045 Score=43.70 Aligned_cols=55 Identities=16% Similarity=0.303 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHH
Q 018824 181 CHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPV 235 (350)
Q Consensus 181 ~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllli 235 (350)
++..+..+...++++++++.+.-+ .....+.+.+++.+++||+++..++.++.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 566677888899999999998654 5688999999999999999999999998764
No 62
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.96 E-value=1 Score=44.54 Aligned_cols=102 Identities=20% Similarity=0.212 Sum_probs=80.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccC-------ChhHHHHHHHHHHhh
Q 018824 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQL-------PLTLWLSLAPVVIGV 239 (350)
Q Consensus 168 ~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~-------t~~~ilsllliv~GV 239 (350)
+.+.+..-+.-|++..+++.....++++..++.+.-+ ..+.-++..++..++++|-. ......+++++++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 4456666777888888999999999999999988654 56778888889999988643 234677888899999
Q ss_pred hhhcc----ccc--------ccc-HHHHHHHHHHHHHHHHHHH
Q 018824 240 SMASL----TEL--------SFN-WTGFISAMISNISFTYRSI 269 (350)
Q Consensus 240 ~l~~~----~e~--------~f~-~~G~~lal~S~l~~A~~~V 269 (350)
++.+. .|. ++| ..|++.+++|.+.++.|+.
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~ 191 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSF 191 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHH
Confidence 99776 332 233 5799999999999999993
No 63
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.94 E-value=0.39 Score=41.26 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=78.3
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHH
Q 018824 125 NILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLP-KRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT 203 (350)
Q Consensus 125 ~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~-~~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~i 203 (350)
..+|-.+-+...+|+.-+++-+.++.+.+.+.+....+ +..+.++..| +...-|++......+.++....++++.+..
T Consensus 17 ~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~-w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~ 95 (138)
T PF04657_consen 17 AAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPW-WAYLGGLLGVFFVLSNIILVPRLGAALTTI 95 (138)
T ss_pred HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCCh-HHhccHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 35555555555569999999999998876544332211 1111221123 233467777667778888888988888765
Q ss_pred H-HhhhHHHHHHHHHH----HcCccCChhHHHHHHHHHHhhhh
Q 018824 204 I-KALEPFFNAAASQF----ILGQQLPLTLWLSLAPVVIGVSM 241 (350)
Q Consensus 204 i-ka~~Pifv~lls~l----flkEr~t~~~ilsllliv~GV~l 241 (350)
+ -.-+-+...+++.+ .-|+++++.+++++.++++|+.+
T Consensus 96 l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 96 LIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 5 45566777777875 35789999999999999999864
No 64
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.83 E-value=0.043 Score=50.25 Aligned_cols=83 Identities=20% Similarity=0.218 Sum_probs=66.5
Q ss_pred cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc---------------------------c
Q 018824 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------------------------S 248 (350)
Q Consensus 196 vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~---------------------------~ 248 (350)
++++.....|+..++++++.++.+.++|.+..++++.++...|+.....+|. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 5677788899999999999999999999999999999999999875322211 1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q 018824 249 FNWTGFISAMISNISFTYRSIYSKKAMTDM 278 (350)
Q Consensus 249 f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l 278 (350)
..+.|....+.+.++.++..++.++..++.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~ 111 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG 111 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCC
Confidence 236788888888888889999999876544
No 65
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=95.65 E-value=0.74 Score=44.30 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 170 ~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
..+..+...|..-++...+...|-+.++.+...++.+.+|....+++.+++||+++..++.+-.++-.|+.+.+
T Consensus 209 ~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~ 282 (293)
T COG2962 209 SLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFS 282 (293)
T ss_pred hHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45666777777777777888889999999999999999999999999999999999999999988888887764
No 66
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.65 E-value=0.033 Score=46.34 Aligned_cols=71 Identities=21% Similarity=0.360 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (350)
Q Consensus 171 ~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~ 242 (350)
+|+..+|..+=.. +.+..++.+...++|.+.-+ ++++=+|+++.++++.+|..+++.++|+++++.|+.+.
T Consensus 41 n~~y~ipf~lNq~-GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 41 NPKYIIPFLLNQS-GSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 3566777776443 44555778888888888766 68999999999999999999999999999999998764
No 67
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=95.65 E-value=0.52 Score=46.48 Aligned_cols=59 Identities=17% Similarity=0.303 Sum_probs=50.4
Q ss_pred HHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc
Q 018824 188 TSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (350)
Q Consensus 188 ~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e 246 (350)
.....+++.++.+.++--.++.++.++++.+++|+++++.-+++.+++++|.++....+
T Consensus 249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 44566777777777777788899999999999999999999999999999999876543
No 68
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=95.47 E-value=0.45 Score=45.47 Aligned_cols=66 Identities=20% Similarity=0.223 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHH----HHHHHHHhh
Q 018824 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWL----SLAPVVIGV 239 (350)
Q Consensus 174 ~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~il----sllliv~GV 239 (350)
.-..-|+++..++.+...|.+.+.++.+-.+..+..+...+-+.+++||+=+++++. +++++++|.
T Consensus 197 ~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~ 266 (269)
T PF06800_consen 197 KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA 266 (269)
T ss_pred HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence 456778899999999999999999999999999999999999999999988877653 444444444
No 69
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=95.04 E-value=0.059 Score=52.25 Aligned_cols=62 Identities=24% Similarity=0.388 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 182 ~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
+.++......|+.+.|.+..+-+.+..-++.++++.+++|||+++..+.|..+++.|+.++.
T Consensus 60 ~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 60 MVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 45677788899999999999999999999999999999999999999999999999998754
No 70
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.14 E-value=0.62 Score=42.53 Aligned_cols=65 Identities=14% Similarity=0.127 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (350)
Q Consensus 177 ~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l 241 (350)
.+.+..+.+..+-.+.+++.+.....+..++.++++.+++.++++|+++..++.|..+++.|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 33344555556667788898888899999999999999999999999999999999999988653
No 71
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=93.66 E-value=0.12 Score=41.54 Aligned_cols=74 Identities=18% Similarity=0.198 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhcCchhhhcchhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 018824 262 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQV 341 (350)
Q Consensus 262 l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~Eg~~~~~~~~~~~~~~~g~~~~~~~l~~sGl~~~lyn~~ 341 (350)
++|+.+.++.|+..+++|+.....+....+.+ +++...+.+..+......++ -....+.+++.+++.+.+|+..
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~a 74 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQ-----WLWLLFLGLLGTALAYLLYFYA 74 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhh-----hhhhhHhhccceehHHHHHHHH
Confidence 46889999999999999999999999999998 77776666544311111111 1123444444456666666655
No 72
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=92.51 E-value=3.9 Score=37.95 Aligned_cols=50 Identities=8% Similarity=0.149 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHH
Q 018824 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFI 219 (350)
Q Consensus 170 ~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lf 219 (350)
++|..++..+++..+++.+.+.++++.+++...+..+++|++.++++.++
T Consensus 206 ~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 206 PIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 47888888888766789999999999999999999999999999998764
No 73
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.77 E-value=8.2 Score=33.75 Aligned_cols=119 Identities=18% Similarity=0.177 Sum_probs=71.1
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q 018824 124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (350)
Q Consensus 124 ~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~~~~~~l~~~~~i~--~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~ 201 (350)
-+-+|-.+-+....|..-+++-+.++.+.+......+ .+.+... ++...+...-|++.+.....+......+.+..+
T Consensus 20 Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~~t 98 (150)
T COG3238 20 QAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAATT 98 (150)
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHHHH
Confidence 3456666666666799999999999888765433222 2222222 121222333344444433444445556666555
Q ss_pred HHH-HhhhHHHHHHHHHHHc----CccCChhHHHHHHHHHHhhhhhc
Q 018824 202 HTI-KALEPFFNAAASQFIL----GQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 202 ~ii-ka~~Pifv~lls~lfl----kEr~t~~~ilsllliv~GV~l~~ 243 (350)
.++ -+-+-+.-+++..+=+ +++++..++++++++++|+.++.
T Consensus 99 ~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 99 IALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 443 4555566666665543 47899999999999999966553
No 74
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=91.68 E-value=0.25 Score=47.18 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=62.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (350)
Q Consensus 168 ~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l 241 (350)
.+++|..+.-+|++..+++++...++|.=-++-..+.+.+.-+|..+...+|+|+.|++..|.|.++++.-.+.
T Consensus 249 cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~ 322 (346)
T KOG4510|consen 249 CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVW 322 (346)
T ss_pred cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHH
Confidence 45677778889999989999999999987777777899999999999999999999999999887766654443
No 75
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.11 E-value=6.9 Score=38.11 Aligned_cols=73 Identities=18% Similarity=0.306 Sum_probs=59.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhh-cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824 168 DSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (350)
Q Consensus 168 ~~~~~~~ll~lgl~~~l~~~~~n~sl~~-vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l 241 (350)
.++-++.++..+.+.+.++.+-++-++. .++.+ .+|..+-=+++.+++.+.++++.++.+|.++++.+.|..+
T Consensus 237 hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~-t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 237 HPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTF-TTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred ChhHHHHHHHHHHhhhhhhheehhhHhhcccHHH-HHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 4567888999999999988776666665 45544 4666777899999999999999999999999888888765
No 76
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=89.18 E-value=1.9 Score=42.21 Aligned_cols=131 Identities=13% Similarity=0.087 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh--c--CCcHHHHHHHHHHHHHHHHH-HHHHhcCCCCC------CCChHHHHHHHHHH
Q 018824 111 GFFFFMWYFLNVIFNILNKRIYN--Y--FPYPYFVSVIHLLVGVVYCL-VSWAVGLPKRA------PIDSKLLKLLIPVA 179 (350)
Q Consensus 111 ~~~~~~W~~~s~~~~i~nK~il~--~--fp~P~~lt~~r~~ia~l~ll-~~~~~~l~~~~------~i~~~~~~~ll~lg 179 (350)
..+...+......-+++.|.++. . . +++.+....--++.+.++ +.+........ +.+.. .......+
T Consensus 165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~-~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s 242 (316)
T KOG1441|consen 165 FISAMISNLAFALRNILSKKLLTSKGESL-NSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNS 242 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccc-CchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHH
Confidence 34555555566667788888884 1 4 377776666666666655 44332111111 11222 22333444
Q ss_pred HHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 180 l~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
++....+...+..+..++.=.+++....-=+++...++++++++.++.+..|.++.++|+.+-.
T Consensus 243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 6655566777778888888888888766667778889999999999999999999999998865
No 77
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=86.57 E-value=0.32 Score=45.90 Aligned_cols=121 Identities=14% Similarity=0.149 Sum_probs=89.9
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHcCccCChhHH----HHHHHHHHhh
Q 018824 165 APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGV 239 (350)
Q Consensus 165 ~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lflkEr~t~~~i----lsllliv~GV 239 (350)
|..+.+.+..-+.-|++.+.++...+-|+++.++|.+.-+ ..+.-+-+.+++++.+||-.+..+. .++++++.|+
T Consensus 52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~ 131 (288)
T COG4975 52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGI 131 (288)
T ss_pred CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhh
Confidence 4455555655666777888899999999999999887644 4556677788899999998777664 4678888999
Q ss_pred hhhccccc--------cccHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHH
Q 018824 240 SMASLTEL--------SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYI 287 (350)
Q Consensus 240 ~l~~~~e~--------~f~~~G~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~ 287 (350)
.+.+..|. +.--.|+...+.|.+.|..|.++.+.. +.|.++...-+
T Consensus 132 ~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f--~v~g~saiLPq 185 (288)
T COG4975 132 YLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF--DVDGLSAILPQ 185 (288)
T ss_pred eEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc--cccchhhhhHH
Confidence 99887653 111479999999999999999988765 35555544443
No 78
>PRK13499 rhamnose-proton symporter; Provisional
Probab=86.22 E-value=38 Score=33.68 Aligned_cols=69 Identities=9% Similarity=0.101 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHH---HH-hhhHHHHHHHHHHHcCccCC------hhHHHHHHHHHHhhhhhccc
Q 018824 176 IPVAVCHALGHVTSNVSFAAVAVSFTHT---IK-ALEPFFNAAASQFILGQQLP------LTLWLSLAPVVIGVSMASLT 245 (350)
Q Consensus 176 l~lgl~~~l~~~~~n~sl~~vsvs~~~i---ik-a~~Pifv~lls~lflkEr~t------~~~ilsllliv~GV~l~~~~ 245 (350)
..-|+....++.++.++-+..++...-+ +. ++.-++..+-+. ++||+=+ ...+++++++++|..++..+
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 5556677777777777777665544434 55 444455555454 6988755 56678888888888877554
No 79
>COG2510 Predicted membrane protein [Function unknown]
Probab=86.07 E-value=7.6 Score=33.25 Aligned_cols=50 Identities=16% Similarity=0.245 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 018824 254 FISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVE 303 (350)
Q Consensus 254 ~~lal~S~l~~A~~~Vl~kk~~~~l~~~~l~~~~~~~s~l~Llp~al~~E 303 (350)
.++++++++.+++..++.|--.+++||..-+..-+....+++....+...
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g 54 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTG 54 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999998888888888777777765543
No 80
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.64 E-value=0.52 Score=45.96 Aligned_cols=67 Identities=19% Similarity=0.296 Sum_probs=58.5
Q ss_pred HHHH-HHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824 178 VAVC-HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (350)
Q Consensus 178 lgl~-~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~ 244 (350)
.|++ +.++-..++.|+.+.|.+..+-+.++.-++.++++..++|||.++.-.+|.+++++|-.+++.
T Consensus 69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 3443 445778888899999999999999999999999999999999999999999999999887653
No 81
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=82.18 E-value=2.7 Score=39.55 Aligned_cols=71 Identities=15% Similarity=0.195 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (350)
Q Consensus 171 ~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l 241 (350)
.|..+..++++..+++++-+.-..+-+.-.-+++..+--+|+.++++++++..++.++|++-.+++.|...
T Consensus 240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 45667788888888888777666665554556777778899999999999999999999999999888765
No 82
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=71.40 E-value=3.3 Score=39.20 Aligned_cols=72 Identities=17% Similarity=0.236 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHH----HHHHHHHhhhh
Q 018824 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWL----SLAPVVIGVSM 241 (350)
Q Consensus 170 ~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~il----sllliv~GV~l 241 (350)
++-..-...|+....++.+..+|-+.+.++..-.+..+--+...+-+.+|+|||=+.+++. +++++++|+.+
T Consensus 207 K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 207 KYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred HHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 3344456778888888888888888877776666777777777788999999999988764 34444444443
No 83
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=70.79 E-value=71 Score=30.13 Aligned_cols=116 Identities=10% Similarity=0.071 Sum_probs=75.1
Q ss_pred HHHHHHHHHHh--cCCcHHHHHHHHHHHHHHHHHHH-HHh-cCCC---CCCCChHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018824 123 IFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVS-WAV-GLPK---RAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA 195 (350)
Q Consensus 123 ~~~i~nK~il~--~fp~P~~lt~~r~~ia~l~ll~~-~~~-~l~~---~~~i~~~~~~~ll~lgl~~~l~~~~~n~sl~~ 195 (350)
.+....|...+ +|. -..-.++.-+++..+++.+ ... .+.. ...++.+...+.+.-|++...-..++-|.+.-
T Consensus 169 afVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrV 247 (309)
T COG5070 169 AFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRV 247 (309)
T ss_pred HHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEee
Confidence 34455555444 344 2334456666666554332 111 1111 11234455556677777766556677788888
Q ss_pred cchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhh
Q 018824 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGV 239 (350)
Q Consensus 196 vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV 239 (350)
++....+++.++.-.-.++.+.++++|+.+...+.++++.....
T Consensus 248 tSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg 291 (309)
T COG5070 248 TSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSG 291 (309)
T ss_pred hhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHH
Confidence 88888999999998888999999999999999998887666543
No 84
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=68.05 E-value=1.1e+02 Score=30.44 Aligned_cols=134 Identities=16% Similarity=0.234 Sum_probs=81.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH-HhhhHHHHHHHHHHHc-------CccCChhHHHHHHHHHHhh
Q 018824 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFIL-------GQQLPLTLWLSLAPVVIGV 239 (350)
Q Consensus 168 ~~~~~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~ii-ka~~Pifv~lls~lfl-------kEr~t~~~ilsllliv~GV 239 (350)
+.+.+......|++..++.+..-.+++|+.++..+-| ..+.-++-.++--++. .++-....++++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 3345666677788877777777788888877776533 2222222223322232 2344557889999999999
Q ss_pred hhhcc----cc-------ccccH-HHHHHHHHHHHHHHHHHHHHhhhc--------cCCCHH----HHHHHHHHHHHHHH
Q 018824 240 SMASL----TE-------LSFNW-TGFISAMISNISFTYRSIYSKKAM--------TDMDST----NIYAYISIIALFVC 295 (350)
Q Consensus 240 ~l~~~----~e-------~~f~~-~G~~lal~S~l~~A~~~Vl~kk~~--------~~l~~~----~l~~~~~~~s~l~L 295 (350)
++... .| .+||+ .|.+.+++|.+..+..++-...-. ...+|+ ..+.....-+++..
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN 228 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITN 228 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHH
Confidence 98753 11 14553 799999999999988887544321 122333 12233345566666
Q ss_pred HHHHHH
Q 018824 296 IPPAII 301 (350)
Q Consensus 296 lp~al~ 301 (350)
+..+++
T Consensus 229 ~~yc~~ 234 (344)
T PF06379_consen 229 LIYCLI 234 (344)
T ss_pred HHHHHH
Confidence 776655
No 85
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=63.23 E-value=1.3e+02 Score=28.09 Aligned_cols=114 Identities=11% Similarity=0.086 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH-HHH-HhcCCC--CCCCChHHHHH-HHHHHHHHHHHHHHHHHHh
Q 018824 119 FLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCL-VSW-AVGLPK--RAPIDSKLLKL-LIPVAVCHALGHVTSNVSF 193 (350)
Q Consensus 119 ~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll-~~~-~~~l~~--~~~i~~~~~~~-ll~lgl~~~l~~~~~n~sl 193 (350)
.++..-.+++.+++++-..|+.+.-.|+.+..+++. +.. .....+ +..+- +.+.. ...+-+.++.+-+....-+
T Consensus 124 ~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f-~G~~~~~~~~i~~~a~gGllva~v~ 202 (244)
T PF04142_consen 124 FLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFF-HGYSWWVWIVIFLQAIGGLLVAFVL 202 (244)
T ss_pred HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCch-hhcchHHHHHHHHHHHhhHHHHHHH
Confidence 455566688888888755577777788766665442 222 111111 11111 11111 2222234444434445667
Q ss_pred hhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHH
Q 018824 194 AAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233 (350)
Q Consensus 194 ~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsll 233 (350)
+|.+-=.-....+..-+++.+++.++++.+++....+|..
T Consensus 203 KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 203 KYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 7776655566678888999999999999999998877653
No 86
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=61.93 E-value=90 Score=25.75 Aligned_cols=30 Identities=23% Similarity=0.260 Sum_probs=25.2
Q ss_pred HHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824 213 AAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (350)
Q Consensus 213 ~lls~lflkEr~t~~~ilsllliv~GV~l~ 242 (350)
+.++.+++||++++....+.+.++++|..+
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 466888999999999999998888777543
No 87
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=59.36 E-value=59 Score=31.86 Aligned_cols=129 Identities=11% Similarity=0.036 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHH-HhcC-C----CCCCCC-hHHHHHHHHHHHHHH
Q 018824 113 FFFMWYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSW-AVGL-P----KRAPID-SKLLKLLIPVAVCHA 183 (350)
Q Consensus 113 ~~~~W~~~s~~~~i~nK~il~~--fp~P~~lt~~r~~ia~l~ll~~~-~~~l-~----~~~~i~-~~~~~~ll~lgl~~~ 183 (350)
+......+...+..+.|+-.+. +. -+-+.++.-+.....+...+ ..+- . ..++.+ ...+..+..-+++..
T Consensus 161 w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf 239 (314)
T KOG1444|consen 161 WALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGF 239 (314)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHH
Confidence 3334444444555777777763 21 22344444444444333222 1121 0 001111 112333444444544
Q ss_pred HHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (350)
Q Consensus 184 l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~ 242 (350)
+-.++..+..+..|+..+++.....-..+.+...++.++++++....|+++.+.|-++-
T Consensus 240 ~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y 298 (314)
T KOG1444|consen 240 GISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY 298 (314)
T ss_pred HHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence 45667777778888777777776666667777777778888888888888888776654
No 88
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=50.25 E-value=59 Score=32.75 Aligned_cols=63 Identities=10% Similarity=0.068 Sum_probs=48.2
Q ss_pred HHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhccccc
Q 018824 185 GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL 247 (350)
Q Consensus 185 ~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e~ 247 (350)
+-+++..|.-.++.-.+++-.+.+....++...++.++++++..++|-+++++|-+.+...+.
T Consensus 331 SDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 331 SDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 344555666666666666656666666678899999999999999999999999998876543
No 89
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=49.03 E-value=30 Score=28.65 Aligned_cols=70 Identities=17% Similarity=0.215 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchHHHH-HHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824 172 LKLLIPVAVCHALGHVTSNVSFAAVAVSFTH-TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (350)
Q Consensus 172 ~~~ll~lgl~~~l~~~~~n~sl~~vsvs~~~-iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~ 242 (350)
|.+..|..+=. .+..+++.-++..+.+.+. +-++++-.|+.+.+..+..|....+.++|..+++.|..+.
T Consensus 53 w~Y~iPFllNq-cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLLNQ-CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHH-hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 33444554422 2233445556666665553 3467788899999988888888888999999999998764
No 90
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.27 E-value=1.7e+02 Score=23.93 Aligned_cols=31 Identities=16% Similarity=0.120 Sum_probs=26.9
Q ss_pred HHHHHHHcCccCChhHHHHHHHHHHhhhhhc
Q 018824 213 AAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (350)
Q Consensus 213 ~lls~lflkEr~t~~~ilsllliv~GV~l~~ 243 (350)
+.++.+.+||++++..+.+.+.+..|+.++.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 4678899999999999999999998887653
No 91
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=43.67 E-value=1.8e+02 Score=28.36 Aligned_cols=50 Identities=12% Similarity=0.128 Sum_probs=39.4
Q ss_pred chHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcccc
Q 018824 197 AVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (350)
Q Consensus 197 svs~~~iika~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~~e 246 (350)
.+..+.++...--..+.+++++++-++++.....+.++++.|+.+=.+++
T Consensus 285 GA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 285 GALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred chhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 44445555555566788899999999999999999999999999855554
No 92
>COG5373 Predicted membrane protein [Function unknown]
Probab=41.74 E-value=5.4e+02 Score=28.76 Aligned_cols=23 Identities=4% Similarity=0.028 Sum_probs=14.3
Q ss_pred hhcchHHHHHHHhhhHHHHHHHH
Q 018824 194 AAVAVSFTHTIKALEPFFNAAAS 216 (350)
Q Consensus 194 ~~vsvs~~~iika~~Pifv~lls 216 (350)
-+++.+.+-++-.+.-+.++.++
T Consensus 222 d~i~pgaAf~LL~lIs~~t~~LA 244 (931)
T COG5373 222 DLIGPGAAFALLVLISLATIGLA 244 (931)
T ss_pred ccCChhHHHHHHHHHHHHHHHHH
Confidence 35677766666666666665555
No 93
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=32.87 E-value=3.1e+02 Score=23.28 Aligned_cols=52 Identities=6% Similarity=0.093 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCC-HHHHHHHHHHHHHHHHHHHHHHhcCc
Q 018824 254 FISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGP 305 (350)
Q Consensus 254 ~~lal~S~l~~A~~~Vl~kk~~~~l~-~~~l~~~~~~~s~l~Llp~al~~Eg~ 305 (350)
.++++.+...-+.+..+..++.++.+ |+.-...+...+++.+....++.+.+
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~ 55 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP 55 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 45677788888888888888777775 99888899999999998888877654
No 94
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=28.77 E-value=4.8e+02 Score=24.28 Aligned_cols=134 Identities=17% Similarity=0.236 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH-HHHh-cC-CCCCCCCh-HHHHHHHHHHHHH
Q 018824 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAV-GL-PKRAPIDS-KLLKLLIPVAVCH 182 (350)
Q Consensus 107 ~l~~~~~~~~W~~~s~~~~i~nK~il~~fp~P~~lt~~r~~ia~l~ll~-~~~~-~l-~~~~~i~~-~~~~~ll~lgl~~ 182 (350)
.+....|...-...+.....++..+++.+. - --...|.+.+..+... .+.. ++ .+..+.++ ..+....|+-+|.
T Consensus 35 ~~i~~~Y~~l~~~l~~i~~~~~~~~~~~i~-~-yg~~~h~imal~li~~Gi~ti~~W~~~~~~~s~~t~lal~~PCPvCl 112 (224)
T PF09930_consen 35 ALIALGYGLLFLLLGYIASPINMEIYEFIL-R-YGMVIHLIMALLLIYAGIYTIKKWKKSGKDSSRRTFLALSLPCPVCL 112 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-H-HhHHHHHHHHHHHHHHHHHHHHHHcccCCCCcccchhhhhcCchHHH
Confidence 344555666655555544444333333211 0 1113455555554321 1111 11 12222233 2344556666665
Q ss_pred HHHHHHHHHHhhhcchHHHHHHHhhhHHHH---HHHHHHHcCccCChhHHHHHHHHHHhhhhh
Q 018824 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFN---AAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (350)
Q Consensus 183 ~l~~~~~n~sl~~vsvs~~~iika~~Pifv---~lls~lflkEr~t~~~ilsllliv~GV~l~ 242 (350)
+.-..........++.+...+-....-+|. ...+.++.+.+.+....+|-++.+.|....
T Consensus 113 ~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~GlyfL 175 (224)
T PF09930_consen 113 TAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLGLYFL 175 (224)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 543332233334455555444333332222 233444455566666777777777776543
No 95
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=24.50 E-value=6.7e+02 Score=24.49 Aligned_cols=53 Identities=17% Similarity=0.179 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchHHHHHHHhhhHHHHHHHHHHHcCccCChhHHHH
Q 018824 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLS 231 (350)
Q Consensus 175 ll~lgl~~~l~~~~~n~sl~~vsvs~~~iika~~Pifv~lls~lflkEr~t~~~ils 231 (350)
++..+++..+-+. .++++..++ .+=+..++|+++.+.-.+..++.-++.+.++
T Consensus 170 ll~~a~~QGvL~G---a~ls~~~l~-sePf~~LT~iv~sfi~~~i~~~~~~R~~lLg 222 (299)
T PF05884_consen 170 LLFFALFQGVLVG---AGLSHLYLS-SEPFIALTPIVSSFIYPLIAGHGTNRQKLLG 222 (299)
T ss_pred HHHHHHHHHHHHH---HHhhccccc-CCcHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 4444554433222 233443333 2455678999998877777766445555444
No 96
>PRK02237 hypothetical protein; Provisional
Probab=24.30 E-value=1.3e+02 Score=24.89 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824 209 PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (350)
Q Consensus 209 Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~ 244 (350)
-+...+-.+.+-|+||+..-++|..++++|+.++..
T Consensus 70 I~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 70 VAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 344445678888999999999999999999988753
No 97
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=23.35 E-value=1.2e+02 Score=24.99 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHcCccCChhHHHHHHHHHHhhhhhcc
Q 018824 209 PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (350)
Q Consensus 209 Pifv~lls~lflkEr~t~~~ilsllliv~GV~l~~~ 244 (350)
-+...+-.+.+-|+||+..-+++..++++|+.++..
T Consensus 68 I~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 68 IVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 344555677888999999999999999999998754
No 98
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=21.64 E-value=89 Score=30.38 Aligned_cols=132 Identities=14% Similarity=0.103 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHH-Hhc----CCCCCCC-ChHHHHHHHHHHH
Q 018824 109 VTGFFFFMWYFLNVIFN-ILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSW-AVG----LPKRAPI-DSKLLKLLIPVAV 180 (350)
Q Consensus 109 ~~~~~~~~W~~~s~~~~-i~nK~il~~-fp~P~~lt~~r~~ia~l~ll~~~-~~~----l~~~~~i-~~~~~~~ll~lgl 180 (350)
.++..+.+|-.+...++ ++.|..+.. -..-|.++++.-+.+.++.++.. ..+ ....+.. ..+.|..+..-|+
T Consensus 184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl 263 (347)
T KOG1442|consen 184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL 263 (347)
T ss_pred hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence 35667777766665544 677765553 22346677777676666544322 111 1111222 2344555555566
Q ss_pred HHHHHHHHHHHHhhhcchHHHHHHH-hhhHHHHHHHHHHHcCccCChhHHHHHHHHHHhhhh
Q 018824 181 CHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (350)
Q Consensus 181 ~~~l~~~~~n~sl~~vsvs~~~iik-a~~Pifv~lls~lflkEr~t~~~ilsllliv~GV~l 241 (350)
++..-.+.+.+=++ +..+.++.|. ..--..-.+++..+++|.-+...|-+-++++.|-.+
T Consensus 264 fgF~mgyvTg~QIK-~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~ 324 (347)
T KOG1442|consen 264 FGFAMGYVTGWQIK-VTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLA 324 (347)
T ss_pred HHHHhhheeeEEEE-ecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHH
Confidence 54321111122222 3344444443 233455567788889998888888777666666544
No 99
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=20.40 E-value=6.3e+02 Score=22.68 Aligned_cols=49 Identities=14% Similarity=0.136 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc----C--CcHHHHHHHHHHHHHHHHHH
Q 018824 107 ALVTGFFFFMWYFLNVIFNILNKRIYNY----F--PYPYFVSVIHLLVGVVYCLV 155 (350)
Q Consensus 107 ~l~~~~~~~~W~~~s~~~~i~nK~il~~----f--p~P~~lt~~r~~ia~l~ll~ 155 (350)
.-....|...|+..+....+..-...+. . ..+.....+|..++.+++..
T Consensus 28 ~~~~~af~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lGv~ll~~ 82 (214)
T PF11139_consen 28 RRNLLAFLAGWFLGYLAVGLVLLFGLDALPSGSSSAPSPVVGWLQLVLGVLLLLL 82 (214)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCccHHHHHHHHHHHHHHHH
Confidence 3456778888887777655444444442 1 12556667888888886644
Done!