Query 018826
Match_columns 350
No_of_seqs 267 out of 3675
Neff 10.4
Searched_HMMs 13730
Date Mon Mar 25 06:39:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018826.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018826hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 1E-29 7.4E-34 221.8 17.1 252 54-308 51-312 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 3.8E-29 2.7E-33 218.2 20.0 247 78-326 51-307 (313)
3 d1xkua_ c.10.2.7 (A:) Decorin 99.9 7E-26 5.1E-30 196.5 27.8 255 19-282 23-285 (305)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.9 1.7E-25 1.2E-29 194.1 29.1 276 30-326 11-288 (305)
5 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 3.3E-26 2.4E-30 196.6 22.1 222 34-282 16-238 (284)
6 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 2E-26 1.4E-30 198.0 20.1 213 20-258 25-238 (284)
7 d2omza2 c.10.2.1 (A:33-416) In 99.9 9.9E-24 7.2E-28 188.5 26.7 274 27-320 42-383 (384)
8 d2omza2 c.10.2.1 (A:33-416) In 99.9 2.8E-23 2E-27 185.6 26.5 264 14-299 53-383 (384)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 6.5E-24 4.7E-28 180.2 18.8 201 75-282 8-208 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.9 8.6E-23 6.2E-27 173.2 21.5 202 51-259 8-209 (266)
11 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 4.2E-19 3E-23 146.6 18.0 188 75-278 39-226 (227)
12 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 1.4E-18 1E-22 143.3 18.1 202 34-253 24-225 (227)
13 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.8 6.7E-19 4.9E-23 146.8 15.0 217 32-276 11-232 (242)
14 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.8 7.1E-19 5.1E-23 146.6 14.0 203 102-306 30-239 (242)
15 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.8 1.9E-18 1.4E-22 138.6 15.1 172 151-325 10-185 (192)
16 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 1.3E-15 9.3E-20 133.4 28.1 261 30-321 39-335 (353)
17 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 5.7E-17 4.2E-21 131.8 16.4 145 122-278 65-209 (210)
18 d2omxa2 c.10.2.1 (A:37-235) In 99.7 9.6E-17 7E-21 129.3 17.5 141 122-274 59-199 (199)
19 d1jl5a_ c.10.2.6 (A:) Leucine 99.7 5.3E-15 3.9E-19 129.4 29.1 270 12-316 45-350 (353)
20 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.5E-16 1.1E-20 128.2 17.2 162 51-226 38-199 (199)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.8E-16 1.3E-20 128.8 17.8 181 58-254 29-209 (210)
22 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 2.9E-17 2.1E-21 131.6 11.8 152 150-302 30-183 (192)
23 d2astb2 c.10.1.3 (B:2136-2419) 99.7 7.1E-17 5.1E-21 137.5 10.7 179 101-279 46-235 (284)
24 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.7 1.2E-18 8.8E-23 158.4 -1.1 101 14-114 11-125 (460)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.6 1.5E-16 1.1E-20 135.3 8.2 207 76-286 45-263 (284)
26 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.6 1.5E-16 1.1E-20 139.3 6.5 235 49-283 27-316 (344)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.6 4.8E-16 3.5E-20 136.1 6.3 241 20-260 22-317 (344)
28 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.6 3.5E-17 2.6E-21 148.6 -2.6 279 12-290 34-418 (460)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 4E-15 2.9E-19 115.2 9.1 128 25-155 14-145 (162)
30 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 9E-15 6.5E-19 113.2 10.6 128 145-275 14-145 (162)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.5 7.9E-14 5.8E-18 102.6 12.3 118 32-154 1-122 (124)
32 d1dcea3 c.10.2.2 (A:444-567) R 99.5 8.7E-14 6.3E-18 102.4 11.8 103 176-283 1-104 (124)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 99.4 3.3E-13 2.4E-17 103.5 8.7 110 171-282 6-116 (156)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 99.3 5.9E-12 4.3E-16 96.3 11.7 109 148-258 7-116 (156)
35 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 2.5E-14 1.8E-18 114.5 -5.5 129 46-179 41-180 (198)
36 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 1.7E-13 1.2E-17 109.6 -1.0 127 55-187 25-154 (198)
37 d1koha1 c.10.2.3 (A:201-362) m 98.4 9E-09 6.6E-13 78.7 -1.7 82 194-275 62-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.3 2.2E-08 1.6E-12 76.6 -1.0 65 74-138 62-128 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 98.1 2.3E-06 1.7E-10 65.3 5.7 89 193-281 40-143 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.9 8.7E-06 6.4E-10 61.9 5.9 60 196-255 71-141 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.5 1.8E-05 1.3E-09 60.1 1.9 88 193-280 42-143 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.3 2.3E-05 1.7E-09 59.4 0.8 89 169-257 42-144 (166)
43 d1x62a2 g.39.1.3 (A:8-42) PDZ 56.6 1.9 0.00014 21.3 1.0 22 329-350 4-25 (35)
44 d1x64a1 g.39.1.3 (A:8-52) PDZ 55.0 3 0.00022 22.1 1.6 26 325-350 10-35 (45)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.96 E-value=1e-29 Score=221.80 Aligned_cols=252 Identities=29% Similarity=0.517 Sum_probs=158.6
Q ss_pred CCCEEEccCCcCCC--CcchhccCCCCCcEEeccc-ccccCCCCccccCCCCCcEEEccCCccccccCccccCCCCCCEE
Q 018826 54 NLMGLHLSSNNLTG--ELPQEIENLKSLIRLFVRN-NTLGGPIPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYL 130 (350)
Q Consensus 54 ~L~~L~l~~~~i~~--~~~~~~~~l~~L~~L~l~~-n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 130 (350)
+++.|+++++.+.+ .+|..+.++++|++|++++ |.+.+.+|..+.++++|++|++++|.+.+..+..+..++.|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 45566666665554 2455666666666666654 55555556666666666666666666665555556666666666
Q ss_pred EcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCC-CEEEccCCcccccCCcccCCCCCCCEEECCCCcC
Q 018826 131 FIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSAL-EELDLSDNKIHGIIPDELTKLSQLKNLNISSNLL 209 (350)
Q Consensus 131 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L-~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~ 209 (350)
+++.|.+....+..+.+++.++.+++++|.+.+..|..+.....+ +.+++++|++++..+..+..+. ...+++.++..
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~-~~~l~l~~~~~ 209 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred ccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccccccccccc-ccccccccccc
Confidence 666666555555566666666666666666665566655555554 6667777776666666555553 33677777766
Q ss_pred ccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEEEccccccccccCCcc
Q 018826 210 SGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSHNNLSGTITKTL 289 (350)
Q Consensus 210 ~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~ 289 (350)
.+..|..+..+++++.++++++.+.+..+ .+..+++|+.|++++|++++.+|..+..+++|++|++++|+++|.+|..
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~- 287 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG- 287 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCc-
Confidence 66666666677777777777777764433 4566677777777777777777777777777777777777777777643
Q ss_pred ccccc----CCCCCc-ceec-CCCC
Q 018826 290 CPMHS----DMSFNR-LEGE-IPSN 308 (350)
Q Consensus 290 ~~~~~----~l~~N~-l~~~-ip~~ 308 (350)
..+.. ++++|+ +.|. +|.|
T Consensus 288 ~~L~~L~~l~l~~N~~l~g~plp~c 312 (313)
T d1ogqa_ 288 GNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred ccCCCCCHHHhCCCccccCCCCCCC
Confidence 22211 666664 5654 5543
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.96 E-value=3.8e-29 Score=218.18 Aligned_cols=247 Identities=35% Similarity=0.558 Sum_probs=149.4
Q ss_pred CCcEEecccccccC--CCCccccCCCCCcEEEccC-CccccccCccccCCCCCCEEEcccCccccccchhhhccCCccEE
Q 018826 78 SLIRLFVRNNTLGG--PIPSTLFRLTNLEVLYLGF-NQFNGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQL 154 (350)
Q Consensus 78 ~L~~L~l~~n~~~~--~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 154 (350)
+++.|+++++.+.+ .+|..+.++++|++|++++ |.+.+.+|..+.++++|++|++++|.+....+..+..+.+|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 45666666665554 2455666666666666654 55655566666666666666666666665555556666666666
Q ss_pred ecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCC-CEEECCCCcCccccchhhhCCCCCCEEEccCCcc
Q 018826 155 DLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQL-KNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKL 233 (350)
Q Consensus 155 ~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L-~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i 233 (350)
+++.|.+....|..+..++.++.+++++|.+.+..|..+..+..+ +.+++++|++++..+..+..+.. ..+++.++..
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~-~~l~l~~~~~ 209 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL-AFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC-SEEECCSSEE
T ss_pred ccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccccccccc-cccccccccc
Confidence 666666655556666666666666666666665555555555443 56666666666555555555433 3566666666
Q ss_pred cccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEEEccccccccccCCccccccc----CCCCCcceecCCCCC
Q 018826 234 GGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSHNNLSGTITKTLCPMHS----DMSFNRLEGEIPSNL 309 (350)
Q Consensus 234 ~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~~~~----~l~~N~l~~~ip~~~ 309 (350)
.+..|..+..+++++.+++++|.+++.+ ..+..+++|+.|++++|+++|.+|..+..+.. ++++|+|+|.+|+..
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~ 288 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cccccccccccccccccccccccccccc-cccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcc
Confidence 6555555556666666666666665443 34555566666666666666666666655443 666666666666542
Q ss_pred --CCCCCcccCCCCCCccc
Q 018826 310 --RDNPPKSFAGNTGLCGH 326 (350)
Q Consensus 310 --~~~~~~~~~~n~~~~~~ 326 (350)
..+..+++.||+.+||.
T Consensus 289 ~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 289 NLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp TGGGSCGGGTCSSSEEEST
T ss_pred cCCCCCHHHhCCCccccCC
Confidence 45556666666666653
No 3
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.95 E-value=7e-26 Score=196.54 Aligned_cols=255 Identities=21% Similarity=0.294 Sum_probs=182.2
Q ss_pred ecCCcccCCCCCcCEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCcccc
Q 018826 19 CTIPKEIGSLRNLEVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLF 98 (350)
Q Consensus 19 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 98 (350)
..+|..+. +++++|++++|.++...+..|.++++|++|++++|.+....|..|.+++.|++|++++|++... |..
T Consensus 23 ~~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l-~~~-- 97 (305)
T d1xkua_ 23 EKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKEL-PEK-- 97 (305)
T ss_dssp CSCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBC-CSS--
T ss_pred CccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcC-ccc--
Confidence 35666654 5788888888888766666778888888888888888766677788888888888888877643 322
Q ss_pred CCCCCcEEEccCCccccccCccccCCCCCCEEEcccCcccc--ccchhhhccCCccEEecCCCccccCccccccCCCCCC
Q 018826 99 RLTNLEVLYLGFNQFNGTIPREIGHLKNLTYLFIKVNKLTG--AIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALE 176 (350)
Q Consensus 99 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~--~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~ 176 (350)
..+.++.|.+..|.+.+..+..+.....+..+....+.... .....+..+++|+.+++.+|.+.. .+.. ..++++
T Consensus 98 ~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~--~~~~L~ 174 (305)
T d1xkua_ 98 MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQG--LPPSLT 174 (305)
T ss_dssp CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSS--CCTTCS
T ss_pred hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-cCcc--cCCccC
Confidence 23577778888877776655566667777777776664332 233456677778888888777653 3332 246788
Q ss_pred EEEccCCcccccCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCc
Q 018826 177 ELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNS 256 (350)
Q Consensus 177 ~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~ 256 (350)
.|++++|......+..+..++.++.|++++|.+++..+.++..+++|++|++++|.++ .+|..+..+++|++|++++|+
T Consensus 175 ~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~ 253 (305)
T d1xkua_ 175 ELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNN 253 (305)
T ss_dssp EEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSC
T ss_pred EEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCc
Confidence 8888888777777777777888888888888887777777777888888888888887 556677778888888888888
Q ss_pred CcccCchhh------cccCCCCEEEccccccc
Q 018826 257 LDGTIRPEM------GEILLLQNLDLSHNNLS 282 (350)
Q Consensus 257 i~~~~~~~~------~~~~~L~~L~l~~N~i~ 282 (350)
|+......| ...++|+.+++++|+++
T Consensus 254 i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 254 ISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred cCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 875433232 34567788888888764
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.95 E-value=1.7e-25 Score=194.12 Aligned_cols=276 Identities=24% Similarity=0.315 Sum_probs=224.3
Q ss_pred CcCEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEcc
Q 018826 30 NLEVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLG 109 (350)
Q Consensus 30 ~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 109 (350)
..+.++.++..++.+ |..+ .+++++|++++|+++...+..|.++++|++|++++|.+....+.+|.++++|++|++.
T Consensus 11 ~~~~~~C~~~~L~~l-P~~l--~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKV-PKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCCSC-CCSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCCcc-CCCC--CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 467889888888844 5545 3689999999999996666789999999999999999998888899999999999999
Q ss_pred CCccccccCccccCCCCCCEEEcccCccccccchhhhccCCccEEecCCCccc--cCccccccCCCCCCEEEccCCcccc
Q 018826 110 FNQFNGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLH--SSIPLEIGNLSALEELDLSDNKIHG 187 (350)
Q Consensus 110 ~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~--~~~~~~l~~~~~L~~L~l~~n~~~~ 187 (350)
+|+++.. +.. ..+.++.|.+..|.+.......+.....+..+....+... ...+..+..+++|+.+++++|.+..
T Consensus 88 ~n~l~~l-~~~--~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~ 164 (305)
T d1xkua_ 88 KNQLKEL-PEK--MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 164 (305)
T ss_dssp SSCCSBC-CSS--CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCccCcC-ccc--hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc
Confidence 9999854 333 3468899999999998877777888888889998776543 2334567788999999999998874
Q ss_pred cCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcccCchhhcc
Q 018826 188 IIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGE 267 (350)
Q Consensus 188 ~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~ 267 (350)
. +. ..+++|++|++++|......+..+..++.++.|++++|.+++..+..+.++++|++|++++|+++ .+|.++..
T Consensus 165 l-~~--~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~ 240 (305)
T d1xkua_ 165 I-PQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 240 (305)
T ss_dssp C-CS--SCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred c-Cc--ccCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-cccccccc
Confidence 3 32 23679999999999999888889999999999999999999888888999999999999999999 45778899
Q ss_pred cCCCCEEEccccccccccCCcccccccCCCCCcceecCCCCCCCCCCcccCCCCCCccc
Q 018826 268 ILLLQNLDLSHNNLSGTITKTLCPMHSDMSFNRLEGEIPSNLRDNPPKSFAGNTGLCGH 326 (350)
Q Consensus 268 ~~~L~~L~l~~N~i~~~~p~~~~~~~~~l~~N~l~~~ip~~~~~~~~~~~~~n~~~~~~ 326 (350)
+++|+.|++++|+|+......|..... -....++..+++.|||+-+..
T Consensus 241 l~~L~~L~Ls~N~i~~i~~~~f~~~~~-----------~~~~~~L~~L~L~~N~~~~~~ 288 (305)
T d1xkua_ 241 HKYIQVVYLHNNNISAIGSNDFCPPGY-----------NTKKASYSGVSLFSNPVQYWE 288 (305)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSC-----------CTTSCCCSEEECCSSSSCGGG
T ss_pred ccCCCEEECCCCccCccChhhccCcch-----------hcccCCCCEEECCCCcCccCc
Confidence 999999999999999655555443211 111245667788899876643
No 5
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=3.3e-26 Score=196.56 Aligned_cols=222 Identities=23% Similarity=0.247 Sum_probs=115.9
Q ss_pred EEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEcc-CCc
Q 018826 34 LDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLG-FNQ 112 (350)
Q Consensus 34 L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~-~n~ 112 (350)
++.++..++ ..|..+. +.+++|+|++|.++...+.+|.++++|++|++++|.+....+..+..++.++.+... .+.
T Consensus 16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 445555554 2233221 345566666666654444455556666666666655555554555555555555443 233
Q ss_pred cccccCccccCCCCCCEEEcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCCcc
Q 018826 113 FNGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDE 192 (350)
Q Consensus 113 l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~ 192 (350)
+....+..+.++++|++|++++|.+.... +..+....+|+.+++++|.++++.+..
T Consensus 93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~~~------------------------~~~~~~~~~L~~l~l~~N~l~~i~~~~ 148 (284)
T d1ozna_ 93 LRSVDPATFHGLGRLHTLHLDRCGLQELG------------------------PGLFRGLAALQYLYLQDNALQALPDDT 148 (284)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCC------------------------TTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cccccchhhcccccCCEEecCCccccccc------------------------ccccchhcccchhhhccccccccChhH
Confidence 33333444555555555555554444333 334444445555555555555444444
Q ss_pred cCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCC
Q 018826 193 LTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQ 272 (350)
Q Consensus 193 ~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~ 272 (350)
+...++|+.|++++|.+.+..+.+|..+++|+.+++++|.+++..|..|..+++|++|++++|++.+..+..+..+++|+
T Consensus 149 f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~ 228 (284)
T d1ozna_ 149 FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228 (284)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred hccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccC
Confidence 55555555555555555544455555555555555555555555555555555555555555555555555555555555
Q ss_pred EEEccccccc
Q 018826 273 NLDLSHNNLS 282 (350)
Q Consensus 273 ~L~l~~N~i~ 282 (350)
+|++++|++.
T Consensus 229 ~L~l~~N~l~ 238 (284)
T d1ozna_ 229 YLRLNDNPWV 238 (284)
T ss_dssp EEECCSSCEE
T ss_pred EEEecCCCCC
Confidence 5555555554
No 6
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=2e-26 Score=197.96 Aligned_cols=213 Identities=25% Similarity=0.242 Sum_probs=149.1
Q ss_pred cCCcccCCCCCcCEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecc-cccccCCCCcccc
Q 018826 20 TIPKEIGSLRNLEVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVR-NNTLGGPIPSTLF 98 (350)
Q Consensus 20 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~-~n~~~~~~~~~~~ 98 (350)
.+|..+. +.+++|+|++|.++...+.+|.++++|++|+++++.+....+..+..++.++.+... .+.+....+..|.
T Consensus 25 ~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 102 (284)
T d1ozna_ 25 AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFH 102 (284)
T ss_dssp SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTT
T ss_pred ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhc
Confidence 6666665 678999999999998888889999999999999999998878888888999998765 5667767788899
Q ss_pred CCCCCcEEEccCCccccccCccccCCCCCCEEEcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEE
Q 018826 99 RLTNLEVLYLGFNQFNGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEEL 178 (350)
Q Consensus 99 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L 178 (350)
++++|++|++++|.+....+..+...++|+.+++++|.++.+....+..+++|+.|++++|.+.
T Consensus 103 ~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~---------------- 166 (284)
T d1ozna_ 103 GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS---------------- 166 (284)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------
T ss_pred ccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCccc----------------
Confidence 9999999999999988776777777888888888888777655555555555555555555544
Q ss_pred EccCCcccccCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCc
Q 018826 179 DLSDNKIHGIIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLD 258 (350)
Q Consensus 179 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~ 258 (350)
...+..+.++++|+.+++++|.+++..|..|..+++|++|++++|.+.+..+..|..+++|++|++++|++.
T Consensus 167 --------~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 167 --------SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp --------EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred --------ccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 344444444455555555555554444445555555555555555555444444555555555555555554
No 7
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.93 E-value=9.9e-24 Score=188.52 Aligned_cols=274 Identities=27% Similarity=0.377 Sum_probs=195.4
Q ss_pred CCCCcCEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEE
Q 018826 27 SLRNLEVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVL 106 (350)
Q Consensus 27 ~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 106 (350)
.+.+|++|+++++.+++. +.+..+++|++|++++|++++.. .+.++++|++|++++|.+.+.. .+..+++|+.+
T Consensus 42 ~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L 115 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGL 115 (384)
T ss_dssp HHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEE
T ss_pred HhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCCc--cccCCccccccccccccccccc--ccccccccccc
Confidence 455677777777777643 34566777777777777776443 2667777777777777766432 35667777777
Q ss_pred EccCCccccc---------------------------------------------------------------cCccccC
Q 018826 107 YLGFNQFNGT---------------------------------------------------------------IPREIGH 123 (350)
Q Consensus 107 ~l~~n~l~~~---------------------------------------------------------------~~~~l~~ 123 (350)
++.++.+++. .......
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (384)
T d2omza2 116 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 195 (384)
T ss_dssp ECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccccccc
Confidence 7765544321 0112345
Q ss_pred CCCCCEEEcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEE
Q 018826 124 LKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKNLN 203 (350)
Q Consensus 124 l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ 203 (350)
+++++.+.+++|.+.... .+...++|+.|++++|.+.+. ..+..+++++.+++++|.+++.. .+..+++|+.|+
T Consensus 196 l~~~~~l~l~~n~i~~~~--~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~ 269 (384)
T d2omza2 196 LTNLESLIATNNQISDIT--PLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELK 269 (384)
T ss_dssp CTTCSEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEE
T ss_pred ccccceeeccCCccCCCC--cccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCC--cccccccCCEee
Confidence 678889999998887653 356678899999999988642 35778889999999999888653 377888999999
Q ss_pred CCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEEEcccccccc
Q 018826 204 ISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSHNNLSG 283 (350)
Q Consensus 204 l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~N~i~~ 283 (350)
++++.+++.. .+..++.++.+.+.+|.+++. ..+..+++++.|++++|++++.. .+..+++|+.|++++|+|++
T Consensus 270 l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~ 343 (384)
T d2omza2 270 LGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD 343 (384)
T ss_dssp CCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC
T ss_pred ccCcccCCCC--ccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC
Confidence 9999887543 367788899999999988742 34677889999999999998653 36788899999999999875
Q ss_pred ccCCccccccc----CCCCCcceecCC-CCCCCCCCcccCCC
Q 018826 284 TITKTLCPMHS----DMSFNRLEGEIP-SNLRDNPPKSFAGN 320 (350)
Q Consensus 284 ~~p~~~~~~~~----~l~~N~l~~~ip-~~~~~~~~~~~~~n 320 (350)
. + .+..+.. ++++|+|++..| ..+..+..+++++|
T Consensus 344 l-~-~l~~l~~L~~L~l~~N~l~~l~~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 344 V-S-SLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ 383 (384)
T ss_dssp C-G-GGGGCTTCCEEECCSSCCCBCGGGTTCTTCSEEECCCE
T ss_pred C-h-hHcCCCCCCEEECCCCcCCCChhhccCCCCCEeeCCCC
Confidence 3 3 3554443 888999986544 12256666777665
No 8
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.92 E-value=2.8e-23 Score=185.56 Aligned_cols=264 Identities=29% Similarity=0.404 Sum_probs=207.4
Q ss_pred CCcceecCCcccCCCCCcCEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCC
Q 018826 14 YTENTCTIPKEIGSLRNLEVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPI 93 (350)
Q Consensus 14 ~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 93 (350)
++.++ .+ +.+..+++|++|++++|.+++.. .++++++|++|++++|.+.+..+ +..+++|+.|++.++.+.+..
T Consensus 53 ~~~I~-~l-~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~~--l~~l~~L~~L~~~~~~~~~~~ 126 (384)
T d2omza2 53 RLGIK-SI-DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDID 126 (384)
T ss_dssp SSCCC-CC-TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG
T ss_pred CCCCC-Cc-cccccCCCCCEEeCcCCcCCCCc--cccCCcccccccccccccccccc--ccccccccccccccccccccc
Confidence 44443 34 45778999999999999998653 38899999999999999986533 788999999998876654210
Q ss_pred ---------------------------------------------------------------CccccCCCCCcEEEccC
Q 018826 94 ---------------------------------------------------------------PSTLFRLTNLEVLYLGF 110 (350)
Q Consensus 94 ---------------------------------------------------------------~~~~~~l~~L~~L~l~~ 110 (350)
...+..+++++.+++.+
T Consensus 127 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~ 206 (384)
T d2omza2 127 PLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 206 (384)
T ss_dssp GGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCS
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccC
Confidence 11234467888999999
Q ss_pred CccccccCccccCCCCCCEEEcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCC
Q 018826 111 NQFNGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIP 190 (350)
Q Consensus 111 n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~ 190 (350)
|.+++..+ ...+++|+++++++|.+... ..+..+++|+.+++.+|.+.+.. .+..+++|+.++++++.+.+..
T Consensus 207 n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~~- 279 (384)
T d2omza2 207 NQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNIS- 279 (384)
T ss_dssp SCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG-
T ss_pred CccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCCC-
Confidence 88886543 45678999999999988865 46788899999999999987543 3778899999999999987543
Q ss_pred cccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcccCchhhcccCC
Q 018826 191 DELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILL 270 (350)
Q Consensus 191 ~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~ 270 (350)
.+..++.++.+.+..|.+++. ..+..+++++.|++++|++++.. .+..+++|++|++++|++++ ++ .+..+++
T Consensus 280 -~~~~~~~l~~l~~~~n~l~~~--~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~ 352 (384)
T d2omza2 280 -PLAGLTALTNLELNENQLEDI--SPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTN 352 (384)
T ss_dssp -GGTTCTTCSEEECCSSCCSCC--GGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTT
T ss_pred -ccccccccccccccccccccc--cccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCC
Confidence 477888999999999998853 34788899999999999998543 37789999999999999985 33 6888999
Q ss_pred CCEEEccccccccccCCccccccc----CCCCC
Q 018826 271 LQNLDLSHNNLSGTITKTLCPMHS----DMSFN 299 (350)
Q Consensus 271 L~~L~l~~N~i~~~~p~~~~~~~~----~l~~N 299 (350)
|++|++++|+|++..| +..+.. ++++|
T Consensus 353 L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 353 INWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 9999999999997765 333322 66665
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=6.5e-24 Score=180.20 Aligned_cols=201 Identities=28% Similarity=0.254 Sum_probs=163.1
Q ss_pred CCCCCcEEecccccccCCCCccccCCCCCcEEEccCCccccccCccccCCCCCCEEEcccCccccccchhhhccCCccEE
Q 018826 75 NLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQL 154 (350)
Q Consensus 75 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 154 (350)
....+.+++.+++.++. +|..+. +++++|++++|.+++..+..|..+++|++|++++|.++... .+..+++|+.|
T Consensus 8 ~~~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~--~~~~l~~L~~L 82 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ--VDGTLPVLGTL 82 (266)
T ss_dssp CSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE--CCSCCTTCCEE
T ss_pred ccCCCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccccc--ccccccccccc
Confidence 45567778888888874 455443 57899999999998777778889999999999999887553 45678889999
Q ss_pred ecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCccc
Q 018826 155 DLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLG 234 (350)
Q Consensus 155 ~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~ 234 (350)
++++|++. ..+..+..+++|+.|+++++.+.+..+..+..+.+++.|++++|.+....+..+..+++++.+++++|+++
T Consensus 83 ~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~ 161 (266)
T d1p9ag_ 83 DLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (266)
T ss_dssp ECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred cccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccccc
Confidence 99998886 44567778888999999988888777777788888999999998888777777788888999999999888
Q ss_pred ccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEEEccccccc
Q 018826 235 GSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSHNNLS 282 (350)
Q Consensus 235 ~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~N~i~ 282 (350)
+..+..+..+++|++|++++|+|+ .+|..+..+++|+.|++++|++.
T Consensus 162 ~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred ccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 777777888888999999999888 56667777888888988888764
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=8.6e-23 Score=173.21 Aligned_cols=202 Identities=27% Similarity=0.245 Sum_probs=177.1
Q ss_pred CCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEccCCccccccCccccCCCCCCEE
Q 018826 51 TLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYL 130 (350)
Q Consensus 51 ~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 130 (350)
....+.+++.+++.++ .+|..+. +++++|++++|.+++..+.+|.++++|++|++++|.++.. ..++.+++|++|
T Consensus 8 ~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l--~~~~~l~~L~~L 82 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL--QVDGTLPVLGTL 82 (266)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE--ECCSCCTTCCEE
T ss_pred ccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc--cccccccccccc
Confidence 4556778899999998 4565543 5799999999999977778899999999999999999854 246789999999
Q ss_pred EcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEECCCCcCc
Q 018826 131 FIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLS 210 (350)
Q Consensus 131 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~ 210 (350)
++++|.+... ...+..+++|+.|+++++.+....+..+....+++.|++++|.+....+..+..+++++.+++++|+++
T Consensus 83 ~Ls~N~l~~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~ 161 (266)
T d1p9ag_ 83 DLSHNQLQSL-PLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (266)
T ss_dssp ECCSSCCSSC-CCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred cccccccccc-ccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccccc
Confidence 9999998855 456788999999999999988777778888999999999999999888888889999999999999999
Q ss_pred cccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcc
Q 018826 211 GQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDG 259 (350)
Q Consensus 211 ~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~ 259 (350)
+..+..+..+++|++|+|++|+|+ .+|..+..+++|+.|++++|.+..
T Consensus 162 ~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 162 ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence 888888999999999999999999 778777789999999999999864
No 11
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.81 E-value=4.2e-19 Score=146.59 Aligned_cols=188 Identities=24% Similarity=0.290 Sum_probs=110.7
Q ss_pred CCCCCcEEecccccccCCCCccccCCCCCcEEEccCCccccccCccccCCCCCCEEEcccCccccccchhhhccCCccEE
Q 018826 75 NLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQL 154 (350)
Q Consensus 75 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 154 (350)
++.+|++|.+.+|.+... ..+..+++|++|++++|.+.+.. .+..+++++++++++|.++.. ..+.++++|+.+
T Consensus 39 ~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~~~i--~~l~~l~~L~~l 112 (227)
T d1h6ua2 39 DLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (227)
T ss_dssp HHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeeccc--ccccccccccccccccccccc--cccccccccccc
Confidence 344455555555544422 22444555555555555444321 244555555555555544432 234455556666
Q ss_pred ecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCccc
Q 018826 155 DLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLG 234 (350)
Q Consensus 155 ~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~ 234 (350)
.++++...+. ..+...+.++.+.++++.+... ..+..+++|+.|++++|.+.+. ..++.+++|+.|++++|+++
T Consensus 113 ~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~ 186 (227)
T d1h6ua2 113 DLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKIS 186 (227)
T ss_dssp ECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred cccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccc--hhhcccccceecccCCCccC
Confidence 6655554322 2344556667777776665532 2356667788888888777633 23677788888888888887
Q ss_pred ccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEEEccc
Q 018826 235 GSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSH 278 (350)
Q Consensus 235 ~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~ 278 (350)
+. + .+..+++|++|++++|++++.. .+..+++|+.|++++
T Consensus 187 ~l-~-~l~~l~~L~~L~Ls~N~lt~i~--~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 187 DI-S-PLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTN 226 (227)
T ss_dssp CC-G-GGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEE
T ss_pred CC-h-hhcCCCCCCEEECcCCcCCCCc--ccccCCCCCEEEeeC
Confidence 43 2 3677788888888888887543 366778888888764
No 12
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.80 E-value=1.4e-18 Score=143.29 Aligned_cols=202 Identities=23% Similarity=0.321 Sum_probs=139.8
Q ss_pred EEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEccCCcc
Q 018826 34 LDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLGFNQF 113 (350)
Q Consensus 34 L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l 113 (350)
++++.+.+++.. ..+.+.+|+.|++.+|.++.. +.+..+++|++|++++|.+.+.. .+..+++++.+++.+|.+
T Consensus 24 ~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n~~ 97 (227)
T d1h6ua2 24 IAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGNPL 97 (227)
T ss_dssp HHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeeccc--cccccccccccccccccc
Confidence 345555555432 334567777777777777643 24667777777777777776443 366777777777777776
Q ss_pred ccccCccccCCCCCCEEEcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCCccc
Q 018826 114 NGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDEL 193 (350)
Q Consensus 114 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~ 193 (350)
+.. ..+..+++|+.+.++.+..... ..+...+.++.+.++.+.+... ..+..+++++.|++++|.+.+. ..+
T Consensus 98 ~~i--~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~--~~l 169 (227)
T d1h6ua2 98 KNV--SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDL--TPL 169 (227)
T ss_dssp SCC--GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGG
T ss_pred ccc--cccccccccccccccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccc--hhh
Confidence 633 3566777788887777766543 3455667777888877766432 2355677888888888877643 347
Q ss_pred CCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECC
Q 018826 194 TKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLN 253 (350)
Q Consensus 194 ~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~ 253 (350)
..+++|+.|++++|.+++. + .+..+++|++|++++|++++. + .+..+++|+.|+++
T Consensus 170 ~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i-~-~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 170 ANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDV-S-PLANTSNLFIVTLT 225 (227)
T ss_dssp TTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBC-G-GGTTCTTCCEEEEE
T ss_pred cccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCC-c-ccccCCCCCEEEee
Confidence 7888899999988888743 3 377888999999999988844 3 37788899988886
No 13
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=6.7e-19 Score=146.80 Aligned_cols=217 Identities=16% Similarity=0.121 Sum_probs=114.6
Q ss_pred CEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCC-CCccccCCCCCcEEEccC
Q 018826 32 EVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGP-IPSTLFRLTNLEVLYLGF 110 (350)
Q Consensus 32 ~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~-~~~~~~~l~~L~~L~l~~ 110 (350)
+.++.++..++ ..|+.+. +++++|++++|.++...+.+|.++++|++|++++|.+... .+.+|..++.++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 46666666666 3333331 4677777777777655455677777777777777766543 344566677777776653
Q ss_pred -CccccccCccccCCCCCCEEEcccCccccccch-hhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCccccc
Q 018826 111 -NQFNGTIPREIGHLKNLTYLFIKVNKLTGAIRS-TLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGI 188 (350)
Q Consensus 111 -n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~-~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~ 188 (350)
+.+....+..+.++++|++++++++.+...... .+..+..+..+...++.+ ...
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l------------------------~~i 143 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINI------------------------HTI 143 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTC------------------------CEE
T ss_pred cccccccccccccccccccccccchhhhccccccccccccccccccccccccc------------------------ccc
Confidence 455555555666777777777776665533211 112222333333333333 222
Q ss_pred CCcccCCC-CCCCEEECCCCcCccccchhhhCCCCCCEE-EccCCcccccCCccccCCCCCCEEECCCCcCcccCchhhc
Q 018826 189 IPDELTKL-SQLKNLNISSNLLSGQIPSAIGKLFNLKYL-DLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMG 266 (350)
Q Consensus 189 ~~~~~~~~-~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L-~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~ 266 (350)
....+..+ ..++.|++.+|+++...+..+. .++++.+ .+.+|.++...+..|.++++|++|++++|+++...+..+.
T Consensus 144 ~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~ 222 (242)
T d1xwdc1 144 ERNSFVGLSFESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 222 (242)
T ss_dssp CTTSSTTSBSSCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCT
T ss_pred cccccccccccceeeeccccccccccccccc-chhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHc
Confidence 22233332 2455555555555533333332 2333333 3455555533344456666666666666666644444455
Q ss_pred ccCCCCEEEc
Q 018826 267 EILLLQNLDL 276 (350)
Q Consensus 267 ~~~~L~~L~l 276 (350)
.+++|+.+++
T Consensus 223 ~l~~L~~l~~ 232 (242)
T d1xwdc1 223 NLKKLRARST 232 (242)
T ss_dssp TCCEEESSSE
T ss_pred CCcccccCcC
Confidence 4444444444
No 14
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=7.1e-19 Score=146.65 Aligned_cols=203 Identities=16% Similarity=0.112 Sum_probs=118.0
Q ss_pred CCcEEEccCCccccccCccccCCCCCCEEEcccCccccc-cchhhhccCCccEEecCC-CccccCccccccCCCCCCEEE
Q 018826 102 NLEVLYLGFNQFNGTIPREIGHLKNLTYLFIKVNKLTGA-IRSTLGQLTSLLQLDLSS-NQLHSSIPLEIGNLSALEELD 179 (350)
Q Consensus 102 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~-~~~~~~~~~~L~~L~l~~-n~~~~~~~~~l~~~~~L~~L~ 179 (350)
++++|++++|.++...+.+|.++++|++|++++|.+... ...+|..++.++.+.+.. +.+....+..+..+++|+.++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 344444444444433333344444444444444443321 222344444444444332 333334445556666667777
Q ss_pred ccCCcccccCCc-ccCCCCCCCEEECCCCcCccccchhhhCCC-CCCEEEccCCcccccCCccccCCCCCCEE-ECCCCc
Q 018826 180 LSDNKIHGIIPD-ELTKLSQLKNLNISSNLLSGQIPSAIGKLF-NLKYLDLSKNKLGGSIPTEIGNCSELKNL-TLNHNS 256 (350)
Q Consensus 180 l~~n~~~~~~~~-~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~-~L~~L~l~~n~i~~~~~~~~~~~~~L~~L-~l~~n~ 256 (350)
+++|.+....+. .+..+..+..+...++.+....+..+..++ .++.|++.+|+++...+..+. .++++.+ .+.+|+
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~-~~~l~~~~~l~~n~ 188 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFN-GTQLDELNLSDNNN 188 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTT-TCCEEEEECTTCTT
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccccccccccc-chhhhccccccccc
Confidence 766666533221 223344455556666677655556666554 788999999999965555554 4565555 578889
Q ss_pred CcccCchhhcccCCCCEEEccccccccccCCccccccc--CCCCCcceecCC
Q 018826 257 LDGTIRPEMGEILLLQNLDLSHNNLSGTITKTLCPMHS--DMSFNRLEGEIP 306 (350)
Q Consensus 257 i~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~~~~--~l~~N~l~~~ip 306 (350)
++...+..|.++++|+.|++++|+|+...+..|..+.. .++.+.+. .+|
T Consensus 189 l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~~l~-~lp 239 (242)
T d1xwdc1 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK-KLP 239 (242)
T ss_dssp CCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEESSS-CSC
T ss_pred cccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCCCCC-cCC
Confidence 99766677899999999999999999766666665544 44444454 444
No 15
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.78 E-value=1.9e-18 Score=138.59 Aligned_cols=172 Identities=22% Similarity=0.247 Sum_probs=137.9
Q ss_pred ccEEecCCCccccCccccccCCCCCCEEEccCCcccc-cCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEcc
Q 018826 151 LLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHG-IIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLS 229 (350)
Q Consensus 151 L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~-~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~ 229 (350)
.+.++.++++++ .+|..+ .++++.|++++|.+++ .....|..+++|+.|++++|.+....+..+..+++|++|+++
T Consensus 10 ~~~v~Cs~~~L~-~iP~~l--p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls 86 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEEeCCCcC-ccCCCC--CCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeec
Confidence 346777777776 556544 3678999999999875 445677889999999999999988888889999999999999
Q ss_pred CCcccccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEEEccccccccccCCccccc-cc--CCCCCcceecCC
Q 018826 230 KNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSHNNLSGTITKTLCPM-HS--DMSFNRLEGEIP 306 (350)
Q Consensus 230 ~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~~-~~--~l~~N~l~~~ip 306 (350)
+|+++...+.+|.++++|++|+|++|+|++..+.+|..+++|+++++++|.+.......+... .. .+..|.++...|
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~~~~l~~~~l~~~~~~c~~p 166 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHHhhhhhhhcccCCCeEeCCC
Confidence 999997778889999999999999999998888888899999999999998875444333211 11 777788888888
Q ss_pred CCCCCCCCcccCCCCCCcc
Q 018826 307 SNLRDNPPKSFAGNTGLCG 325 (350)
Q Consensus 307 ~~~~~~~~~~~~~n~~~~~ 325 (350)
..+......++..|...|.
T Consensus 167 ~~l~~~~l~~L~~n~l~C~ 185 (192)
T d1w8aa_ 167 SKVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp TTTTTSBGGGSCTTTCCCC
T ss_pred hhhcCCEeeecCHhhCcCC
Confidence 8888888888888877774
No 16
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.74 E-value=1.3e-15 Score=133.41 Aligned_cols=261 Identities=26% Similarity=0.272 Sum_probs=133.7
Q ss_pred CcCEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEcc
Q 018826 30 NLEVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLG 109 (350)
Q Consensus 30 ~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 109 (350)
+++.|+++++.++. +|+. .++|++|++++|+++ .+|.. +.+|++|++.+|.+... +. + .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~l-~~-l--p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKAL-SD-L--PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCC-CS-C--CTTCCEEECC
T ss_pred CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccchh-hh-h--cccccccccc
Confidence 46677777777763 4432 456777777777776 44533 34677777777766532 21 1 1357777777
Q ss_pred CCccccccCccccCCCCCCEEEcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCccccc-
Q 018826 110 FNQFNGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGI- 188 (350)
Q Consensus 110 ~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~- 188 (350)
+|.+... + .+..+++|++++++++.+..... ....+..+.+..+... ....+...+.++.+.+.+|.....
T Consensus 107 ~n~l~~l-p-~~~~l~~L~~L~l~~~~~~~~~~----~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~~ 178 (353)
T d1jl5a_ 107 NNQLEKL-P-ELQNSSFLKIIDVDNNSLKKLPD----LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKLP 178 (353)
T ss_dssp SSCCSSC-C-CCTTCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSCC
T ss_pred ccccccc-c-chhhhccceeecccccccccccc----ccccccchhhcccccc--ccccccccccceecccccccccccc
Confidence 7776633 3 34566777777776665543211 1233333443333221 112223333344444433322210
Q ss_pred -----------------CCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccC--------
Q 018826 189 -----------------IPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGN-------- 243 (350)
Q Consensus 189 -----------------~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~-------- 243 (350)
....+..++.++.+++++|.... .+ ....++..+.+.++.+.. .+.....
T Consensus 179 ~~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~-~~---~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 253 (353)
T d1jl5a_ 179 DLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKT-LP---DLPPSLEALNVRDNYLTD-LPELPQSLTFLDVSE 253 (353)
T ss_dssp CCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSS-CC---SCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCS
T ss_pred cccccccccccccccccccccccccccccccccccccccc-cc---cccccccccccccccccc-ccccccccccccccc
Confidence 11123455667777777665542 22 223445555555555542 1111100
Q ss_pred ---------CCCCCEEECCCCcCcccCchhhcccCCCCEEEccccccccccCCccccccc-CCCCCcceecCCCCCCCCC
Q 018826 244 ---------CSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSHNNLSGTITKTLCPMHS-DMSFNRLEGEIPSNLRDNP 313 (350)
Q Consensus 244 ---------~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~~~~-~l~~N~l~~~ip~~~~~~~ 313 (350)
.......++..+.+.+. ...+++|++|++++|+|+ .+|..+..... ++++|+|+ .+|+...++.
T Consensus 254 ~~~~~l~~l~~~~~~~~~~~~~~~~~----~~~~~~L~~L~Ls~N~l~-~lp~~~~~L~~L~L~~N~L~-~l~~~~~~L~ 327 (353)
T d1jl5a_ 254 NIFSGLSELPPNLYYLNASSNEIRSL----CDLPPSLEELNVSNNKLI-ELPALPPRLERLIASFNHLA-EVPELPQNLK 327 (353)
T ss_dssp SCCSEESCCCTTCCEEECCSSCCSEE----CCCCTTCCEEECCSSCCS-CCCCCCTTCCEEECCSSCCS-CCCCCCTTCC
T ss_pred ccccccccccchhcccccccCccccc----cccCCCCCEEECCCCccC-ccccccCCCCEEECCCCcCC-ccccccCCCC
Confidence 01122233333333211 122466777777777776 45555544444 77777777 6776666777
Q ss_pred CcccCCCC
Q 018826 314 PKSFAGNT 321 (350)
Q Consensus 314 ~~~~~~n~ 321 (350)
.+++.+|+
T Consensus 328 ~L~L~~N~ 335 (353)
T d1jl5a_ 328 QLHVEYNP 335 (353)
T ss_dssp EEECCSSC
T ss_pred EEECcCCc
Confidence 77777774
No 17
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.73 E-value=5.7e-17 Score=131.77 Aligned_cols=145 Identities=29% Similarity=0.432 Sum_probs=76.8
Q ss_pred cCCCCCCEEEcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCCCE
Q 018826 122 GHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKN 201 (350)
Q Consensus 122 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 201 (350)
..+++|++|++++|.+.... .+..+++|+.|++++|++.+ ++ .+..+++|+.+++++|.+... ..+..++.++.
T Consensus 65 ~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~~~--~~l~~l~~l~~ 138 (210)
T d1h6ta2 65 QYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLES 138 (210)
T ss_dssp GGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCE
T ss_pred hhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-cc-ccccccccccccccccccccc--ccccccccccc
Confidence 33444444444444443321 23344444444544444432 22 244455555555555554422 23555566666
Q ss_pred EECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEEEccc
Q 018826 202 LNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSH 278 (350)
Q Consensus 202 L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~ 278 (350)
+++++|.+++. ..+..+++|+.+++++|++++. + .+..+++|++|++++|++++ ++ .+..+++|+.|++++
T Consensus 139 l~~~~n~l~~~--~~~~~l~~L~~l~l~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 139 LYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI-V-PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp EECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred ccccccccccc--cccccccccccccccccccccc-c-cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 66666666532 2345566677777777766632 2 25566777777777777763 32 466667777777653
No 18
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.73 E-value=9.6e-17 Score=129.29 Aligned_cols=141 Identities=32% Similarity=0.466 Sum_probs=70.4
Q ss_pred cCCCCCCEEEcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCCCE
Q 018826 122 GHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKN 201 (350)
Q Consensus 122 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 201 (350)
..+++|++|++++|.+.... .+.++++|+.|++++|.+.. .+ .+..++.|+.++++++..... ..+..+++|+.
T Consensus 59 ~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~ 132 (199)
T d2omxa2 59 EYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNR 132 (199)
T ss_dssp GGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred ccCCCcCcCccccccccCcc--cccCCccccccccccccccc-cc-ccccccccccccccccccccc--cccchhhhhHH
Confidence 33444444444444443321 13444444444444444332 11 244455555555555544322 23455566666
Q ss_pred EECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEE
Q 018826 202 LNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNL 274 (350)
Q Consensus 202 L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L 274 (350)
|++++|.+.. . ..+..+++|+.|++.+|.+++. + .+.++++|++|++++|++++. +.+..+++|+.|
T Consensus 133 L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l-~-~l~~l~~L~~L~ls~N~i~~i--~~l~~L~~L~~L 199 (199)
T d2omxa2 133 LELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL-K-PLANLTTLERLDISSNKVSDI--SVLAKLTNLESL 199 (199)
T ss_dssp EECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred hhhhhhhhcc-c-ccccccccccccccccccccCC-c-cccCCCCCCEEECCCCCCCCC--ccccCCCCCCcC
Confidence 6666666552 2 2355566666666666666532 2 255666666666666666642 234555666554
No 19
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.72 E-value=5.3e-15 Score=129.39 Aligned_cols=270 Identities=23% Similarity=0.242 Sum_probs=156.6
Q ss_pred CCCCcceecCCcccCCCCCcCEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccC
Q 018826 12 QPYTENTCTIPKEIGSLRNLEVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGG 91 (350)
Q Consensus 12 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~ 91 (350)
+.++.++ .+|.. .++|++|++++|.++ .+|+. ..+|+.|++++|+++. +++ -.+.|++|++++|.+..
T Consensus 45 Ls~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~-l~~---lp~~L~~L~L~~n~l~~ 112 (353)
T d1jl5a_ 45 LNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKA-LSD---LPPLLEYLGVSNNQLEK 112 (353)
T ss_dssp CTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CCS---CCTTCCEEECCSSCCSS
T ss_pred eCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccch-hhh---hcccccccccccccccc
Confidence 3455554 56753 478999999999998 44554 4689999999998873 332 12469999999999874
Q ss_pred CCCccccCCCCCcEEEccCCccccccCccccCCCCCCEEEcccCccccccchhhhccCCccEEecCCCcccc--------
Q 018826 92 PIPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHS-------- 163 (350)
Q Consensus 92 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~-------- 163 (350)
. |. +..+++|++|++.++.+..... ..+.+..+.+..+..... ..+..++.++.+.+.++....
T Consensus 113 l-p~-~~~l~~L~~L~l~~~~~~~~~~----~~~~l~~l~~~~~~~~~~--~~l~~l~~l~~L~l~~n~~~~~~~~~~~~ 184 (353)
T d1jl5a_ 113 L-PE-LQNSSFLKIIDVDNNSLKKLPD----LPPSLEFIAAGNNQLEEL--PELQNLPFLTAIYADNNSLKKLPDLPLSL 184 (353)
T ss_dssp C-CC-CTTCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSSC--CCCTTCTTCCEEECCSSCCSSCCCCCTTC
T ss_pred c-cc-hhhhccceeecccccccccccc----ccccccchhhcccccccc--ccccccccceecccccccccccccccccc
Confidence 4 43 5789999999999887763321 123333444333322211 122333344444443332211
Q ss_pred ----------CccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEECCCCcCccccchhhh---------------
Q 018826 164 ----------SIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLSGQIPSAIG--------------- 218 (350)
Q Consensus 164 ----------~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~--------------- 218 (350)
.....+..++.++.+++++|..... + ....++..+.+.++.+... +....
T Consensus 185 ~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~~~-~---~~~~~l~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~l 259 (353)
T d1jl5a_ 185 ESIVAGNNILEELPELQNLPFLTTIYADNNLLKTL-P---DLPPSLEALNVRDNYLTDL-PELPQSLTFLDVSENIFSGL 259 (353)
T ss_dssp CEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSC-C---SCCTTCCEEECCSSCCSCC-CCCCTTCCEEECCSSCCSEE
T ss_pred ccccccccccccccccccccccccccccccccccc-c---ccccccccccccccccccc-cccccccccccccccccccc
Confidence 0112234567778888877765422 1 2334566666666655421 11110
Q ss_pred --CCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEEEccccccccccCCccccccc-C
Q 018826 219 --KLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSHNNLSGTITKTLCPMHS-D 295 (350)
Q Consensus 219 --~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~~~~-~ 295 (350)
........++..+.+. .....+++|++|++++|+++. +|. .+++|+.|++++|+|+ .+|........ +
T Consensus 260 ~~l~~~~~~~~~~~~~~~----~~~~~~~~L~~L~Ls~N~l~~-lp~---~~~~L~~L~L~~N~L~-~l~~~~~~L~~L~ 330 (353)
T d1jl5a_ 260 SELPPNLYYLNASSNEIR----SLCDLPPSLEELNVSNNKLIE-LPA---LPPRLERLIASFNHLA-EVPELPQNLKQLH 330 (353)
T ss_dssp SCCCTTCCEEECCSSCCS----EECCCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-CCCCCCTTCCEEE
T ss_pred ccccchhcccccccCccc----cccccCCCCCEEECCCCccCc-ccc---ccCCCCEEECCCCcCC-ccccccCCCCEEE
Confidence 0112233333333333 112335788888888888874 443 3578888888888887 46655444443 8
Q ss_pred CCCCcceecCCCCCCCCCCcc
Q 018826 296 MSFNRLEGEIPSNLRDNPPKS 316 (350)
Q Consensus 296 l~~N~l~~~ip~~~~~~~~~~ 316 (350)
+++|+|+ .+|+....+..+.
T Consensus 331 L~~N~L~-~lp~~~~~L~~L~ 350 (353)
T d1jl5a_ 331 VEYNPLR-EFPDIPESVEDLR 350 (353)
T ss_dssp CCSSCCS-SCCCCCTTCCEEE
T ss_pred CcCCcCC-CCCccccccCeeE
Confidence 8888887 6776545555443
No 20
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=1.5e-16 Score=128.17 Aligned_cols=162 Identities=31% Similarity=0.418 Sum_probs=102.4
Q ss_pred CCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEccCCccccccCccccCCCCCCEE
Q 018826 51 TLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYL 130 (350)
Q Consensus 51 ~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 130 (350)
.++++++|+++++.+... +.+..+++|++|++++|.+++.. .+.++++|++|++++|.+... ..+.+++.|+.+
T Consensus 38 ~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L 111 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADI--TPLANLTNLTGL 111 (199)
T ss_dssp HHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEE
T ss_pred HhcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCcc--cccCCcccccccccccccccc--cccccccccccc
Confidence 455666666666666532 23555666666666666665432 256666666666666665532 235666677777
Q ss_pred EcccCccccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEECCCCcCc
Q 018826 131 FIKVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLS 210 (350)
Q Consensus 131 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~ 210 (350)
+++++..... ..+..+++|+.|++++|.+.. . ..+..+++++.|++.+|.+++. ..+.++++|++|++++|+++
T Consensus 112 ~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l--~~l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 112 TLFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL--KPLANLTTLERLDISSNKVS 185 (199)
T ss_dssp ECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred cccccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCC--ccccCCCCCCEEECCCCCCC
Confidence 7766655543 345566777777777776642 2 2466677777888877777654 23677788888888888877
Q ss_pred cccchhhhCCCCCCEE
Q 018826 211 GQIPSAIGKLFNLKYL 226 (350)
Q Consensus 211 ~~~~~~~~~~~~L~~L 226 (350)
+. + .+..+++|+.|
T Consensus 186 ~i-~-~l~~L~~L~~L 199 (199)
T d2omxa2 186 DI-S-VLAKLTNLESL 199 (199)
T ss_dssp CC-G-GGGGCTTCSEE
T ss_pred CC-c-cccCCCCCCcC
Confidence 43 3 46777777765
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=1.8e-16 Score=128.77 Aligned_cols=181 Identities=28% Similarity=0.400 Sum_probs=143.5
Q ss_pred EEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEccCCccccccCccccCCCCCCEEEcccCcc
Q 018826 58 LHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYLFIKVNKL 137 (350)
Q Consensus 58 L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 137 (350)
..+..+.+.+.++. ..+.+|++|+++++.+.... .+..+++|++|++++|++++.. .+..+++|++|++++|.+
T Consensus 29 ~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i 102 (210)
T d1h6ta2 29 DNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKV 102 (210)
T ss_dssp HHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred HHhCcCccCCccCH--HHhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccc
Confidence 34555555544432 34678999999999887543 4778999999999999998643 467899999999999998
Q ss_pred ccccchhhhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEECCCCcCccccchhh
Q 018826 138 TGAIRSTLGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLSGQIPSAI 217 (350)
Q Consensus 138 ~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~ 217 (350)
+.. ..+..+++|+.|+++++.+.. ...+..++.++.+++++|.+++. ..+..+++|+.+++++|.+++. + .+
T Consensus 103 ~~l--~~l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~~--~~~~~l~~L~~l~l~~n~l~~i-~-~l 174 (210)
T d1h6ta2 103 KDL--SSLKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI-V-PL 174 (210)
T ss_dssp CCG--GGGTTCTTCCEEECTTSCCCC--CGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC-G-GG
T ss_pred ccc--ccccccccccccccccccccc--ccccccccccccccccccccccc--cccccccccccccccccccccc-c-cc
Confidence 865 357889999999999988753 24577889999999999988743 3567789999999999999854 3 37
Q ss_pred hCCCCCCEEEccCCcccccCCccccCCCCCCEEECCC
Q 018826 218 GKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNH 254 (350)
Q Consensus 218 ~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~ 254 (350)
..+++|+.|++++|++++ ++ .+..+++|++|++++
T Consensus 175 ~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 175 AGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp TTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred cCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 889999999999999984 44 588899999999864
No 22
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.71 E-value=2.9e-17 Score=131.62 Aligned_cols=152 Identities=20% Similarity=0.273 Sum_probs=92.1
Q ss_pred CccEEecCCCcccc-CccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEc
Q 018826 150 SLLQLDLSSNQLHS-SIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDL 228 (350)
Q Consensus 150 ~L~~L~l~~n~~~~-~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l 228 (350)
++++|+|++|.++. ..+..|..+++|+.|++++|.+....+..+..+++|++|++++|.+++..+.+|.++++|++|+|
T Consensus 30 ~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L 109 (192)
T d1w8aa_ 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCccccccc
Confidence 45555555555543 23344555666666666666666666666666667777777777776666666677777777777
Q ss_pred cCCcccccCCccccCCCCCCEEECCCCcCcccCchhhcccCCCCEEEccccccccccCCccccccc-CCCCCcce
Q 018826 229 SKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIRPEMGEILLLQNLDLSHNNLSGTITKTLCPMHS-DMSFNRLE 302 (350)
Q Consensus 229 ~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~~~~~-~l~~N~l~ 302 (350)
++|+|++..+.+|..+++|++|++++|.+.......+ -...++...+..+.++...|..+..... +++.|.++
T Consensus 110 ~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~-~~~~l~~~~l~~~~~~c~~p~~l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFK 183 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSSTTTTTSBGGGSCTTTCC
T ss_pred CCccccccCHHHhcCCcccccccccccccccccchHH-HhhhhhhhcccCCCeEeCCChhhcCCEeeecCHhhCc
Confidence 7777776666667677777777777777664322111 1123445556666666666655544333 66666554
No 23
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.68 E-value=7.1e-17 Score=137.48 Aligned_cols=179 Identities=21% Similarity=0.207 Sum_probs=90.0
Q ss_pred CCCcEEEccCCccccc-cCccccCCCCCCEEEcccCccccccchhhhccCCccEEecCCC-ccccC-ccccccCCCCCCE
Q 018826 101 TNLEVLYLGFNQFNGT-IPREIGHLKNLTYLFIKVNKLTGAIRSTLGQLTSLLQLDLSSN-QLHSS-IPLEIGNLSALEE 177 (350)
Q Consensus 101 ~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n-~~~~~-~~~~l~~~~~L~~ 177 (350)
.+|++|+++++.+... ....+..+++|++|+++++.+.......+.++++|+.|+++++ .+++. .......+++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 4555555555544422 1223445555555555555554444444555555555555553 22211 1111234556666
Q ss_pred EEccCCc-ccccC-Cccc-CCCCCCCEEECCCCc--Cccc-cchhhhCCCCCCEEEccCCc-ccccCCccccCCCCCCEE
Q 018826 178 LDLSDNK-IHGII-PDEL-TKLSQLKNLNISSNL--LSGQ-IPSAIGKLFNLKYLDLSKNK-LGGSIPTEIGNCSELKNL 250 (350)
Q Consensus 178 L~l~~n~-~~~~~-~~~~-~~~~~L~~L~l~~n~--~~~~-~~~~~~~~~~L~~L~l~~n~-i~~~~~~~~~~~~~L~~L 250 (350)
|++++|. +++.. ...+ ...+.|+.|+++++. ++.. +...+..+++|++|++++|. +++.....+..+++|++|
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L 205 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 205 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred cccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEE
Confidence 6665542 22110 0111 123456666666542 2221 22233456677777776653 555555556666777777
Q ss_pred ECCCC-cCcccCchhhcccCCCCEEEcccc
Q 018826 251 TLNHN-SLDGTIRPEMGEILLLQNLDLSHN 279 (350)
Q Consensus 251 ~l~~n-~i~~~~~~~~~~~~~L~~L~l~~N 279 (350)
++++| .+++.....+..+++|+.|+++++
T Consensus 206 ~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 206 SLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp ECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 77764 455444455566677777777666
No 24
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=1.2e-18 Score=158.41 Aligned_cols=101 Identities=25% Similarity=0.247 Sum_probs=67.5
Q ss_pred CCccee-cCCcccCCCCCcCEEEccCCcCCCC----CCcccCCCCCCCEEEccCCcCCCC----cchhcc-CCCCCcEEe
Q 018826 14 YTENTC-TIPKEIGSLRNLEVLDLVSNNLNGT----IPKEIGTLRNLMGLHLSSNNLTGE----LPQEIE-NLKSLIRLF 83 (350)
Q Consensus 14 ~~~~~~-~~~~~~~~l~~L~~L~l~~~~~~~~----~~~~~~~l~~L~~L~l~~~~i~~~----~~~~~~-~l~~L~~L~ 83 (350)
++++++ .+.+.+..++++++|+|++|.+++. +..++..+++|++|++++|.++.. +...+. ...+|++|+
T Consensus 11 ~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~ 90 (460)
T d1z7xw1 11 CEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLS 90 (460)
T ss_dssp SCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEE
T ss_pred CCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEE
Confidence 344444 2234456678888899998887642 234456788899999998887532 122232 234789999
Q ss_pred cccccccCC----CCccccCCCCCcEEEccCCccc
Q 018826 84 VRNNTLGGP----IPSTLFRLTNLEVLYLGFNQFN 114 (350)
Q Consensus 84 l~~n~~~~~----~~~~~~~l~~L~~L~l~~n~l~ 114 (350)
+++|.++.. .+.++..+++|++|++++|.+.
T Consensus 91 L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 91 LQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp CTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCccccccccccchhhccccccccccccccch
Confidence 998887643 2345667888999999888764
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=1.5e-16 Score=135.35 Aligned_cols=207 Identities=16% Similarity=0.159 Sum_probs=122.8
Q ss_pred CCCCcEEecccccccCC-CCccccCCCCCcEEEccCCccccccCccccCCCCCCEEEcccC-ccccccch-hhhccCCcc
Q 018826 76 LKSLIRLFVRNNTLGGP-IPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYLFIKVN-KLTGAIRS-TLGQLTSLL 152 (350)
Q Consensus 76 l~~L~~L~l~~n~~~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n-~~~~~~~~-~~~~~~~L~ 152 (350)
...|++|+++++.+... ....+..+++|++|++.++.+.+.....++.+++|++|+++++ .++..... ....+++|+
T Consensus 45 ~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~ 124 (284)
T d2astb2 45 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124 (284)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcc
Confidence 44666666666655422 2233455667777777766665544555666677777777663 34432211 234567777
Q ss_pred EEecCCCc-cccC-ccccc-cCCCCCCEEEccCCc--cccc-CCcccCCCCCCCEEECCCC-cCccccchhhhCCCCCCE
Q 018826 153 QLDLSSNQ-LHSS-IPLEI-GNLSALEELDLSDNK--IHGI-IPDELTKLSQLKNLNISSN-LLSGQIPSAIGKLFNLKY 225 (350)
Q Consensus 153 ~L~l~~n~-~~~~-~~~~l-~~~~~L~~L~l~~n~--~~~~-~~~~~~~~~~L~~L~l~~n-~~~~~~~~~~~~~~~L~~ 225 (350)
.|+++++. +++. ....+ ..++.|+.|+++++. +++. .......+++|++|++++| .+++.....+..+++|++
T Consensus 125 ~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~ 204 (284)
T d2astb2 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQH 204 (284)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCE
T ss_pred ccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCE
Confidence 77777653 2211 11112 234678888887653 3221 1122345778888888886 466666667788889999
Q ss_pred EEccCC-cccccCCccccCCCCCCEEECCCCcCcccCch-hhcccCCCCEEEccccccccccC
Q 018826 226 LDLSKN-KLGGSIPTEIGNCSELKNLTLNHNSLDGTIRP-EMGEILLLQNLDLSHNNLSGTIT 286 (350)
Q Consensus 226 L~l~~n-~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~-~~~~~~~L~~L~l~~N~i~~~~p 286 (350)
|++++| .+++.....+..+++|+.|++.++ ++...-. ....+|+|+ +..+.+++..+
T Consensus 205 L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~-~~d~~l~~l~~~lp~L~---i~~~~ls~~~~ 263 (284)
T d2astb2 205 LSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLKEALPHLQ---INCSHFTTIAR 263 (284)
T ss_dssp EECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHHHHSTTSE---ESCCCSCCTTC
T ss_pred EECCCCCCCChHHHHHHhcCCCCCEEeeeCC-CCHHHHHHHHHhCcccc---ccCccCCCCCC
Confidence 999885 577666666778899999999888 4322222 223455554 45556664443
No 26
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.62 E-value=1.5e-16 Score=139.35 Aligned_cols=235 Identities=19% Similarity=0.196 Sum_probs=136.3
Q ss_pred cCCCCCCCEEEccCCcCCCC----cchhccCCCCCcEEecccccccCC----------CCccccCCCCCcEEEccCCccc
Q 018826 49 IGTLRNLMGLHLSSNNLTGE----LPQEIENLKSLIRLFVRNNTLGGP----------IPSTLFRLTNLEVLYLGFNQFN 114 (350)
Q Consensus 49 ~~~l~~L~~L~l~~~~i~~~----~~~~~~~l~~L~~L~l~~n~~~~~----------~~~~~~~l~~L~~L~l~~n~l~ 114 (350)
+.....|+.|++++|.+... +...+...++|+.+.++++..... +...+..+++|++|++++|.+.
T Consensus 27 L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 106 (344)
T d2ca6a1 27 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 106 (344)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCC
T ss_pred HhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccccc
Confidence 33445555555555555422 122234445555555554432211 1122334566666666666655
Q ss_pred ccc----CccccCCCCCCEEEcccCccccccch-------------hhhccCCccEEecCCCccccC----ccccccCCC
Q 018826 115 GTI----PREIGHLKNLTYLFIKVNKLTGAIRS-------------TLGQLTSLLQLDLSSNQLHSS----IPLEIGNLS 173 (350)
Q Consensus 115 ~~~----~~~l~~l~~L~~L~l~~n~~~~~~~~-------------~~~~~~~L~~L~l~~n~~~~~----~~~~l~~~~ 173 (350)
... ...+...++|++|++++|.+...... .....+.|+.+.+++|.+... +...+...+
T Consensus 107 ~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~ 186 (344)
T d2ca6a1 107 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR 186 (344)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT
T ss_pred cccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhh
Confidence 321 12233456666776666655321111 112346677777777765432 223345567
Q ss_pred CCCEEEccCCccccc-----CCcccCCCCCCCEEECCCCcCccc----cchhhhCCCCCCEEEccCCcccccCCc----c
Q 018826 174 ALEELDLSDNKIHGI-----IPDELTKLSQLKNLNISSNLLSGQ----IPSAIGKLFNLKYLDLSKNKLGGSIPT----E 240 (350)
Q Consensus 174 ~L~~L~l~~n~~~~~-----~~~~~~~~~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~i~~~~~~----~ 240 (350)
.++.|++++|.+... ....+...++|+.|++++|.++.. +...+..+++|++|++++|.+++.... .
T Consensus 187 ~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~ 266 (344)
T d2ca6a1 187 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA 266 (344)
T ss_dssp TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHH
T ss_pred hhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHH
Confidence 788888888876532 233456678888888888887633 334567788899999999888753222 2
Q ss_pred cc--CCCCCCEEECCCCcCcccC----chhhc-ccCCCCEEEcccccccc
Q 018826 241 IG--NCSELKNLTLNHNSLDGTI----RPEMG-EILLLQNLDLSHNNLSG 283 (350)
Q Consensus 241 ~~--~~~~L~~L~l~~n~i~~~~----~~~~~-~~~~L~~L~l~~N~i~~ 283 (350)
+. ..+.|++|++++|+|+... ...+. ..+.|+.|++++|++..
T Consensus 267 l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 267 FSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp HHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred hhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 22 2367899999999886432 22232 46789999999998864
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.59 E-value=4.8e-16 Score=136.13 Aligned_cols=241 Identities=20% Similarity=0.218 Sum_probs=175.2
Q ss_pred cCCcccCCCCCcCEEEccCCcCCCC----CCcccCCCCCCCEEEccCCcCCCC----------cchhccCCCCCcEEecc
Q 018826 20 TIPKEIGSLRNLEVLDLVSNNLNGT----IPKEIGTLRNLMGLHLSSNNLTGE----------LPQEIENLKSLIRLFVR 85 (350)
Q Consensus 20 ~~~~~~~~l~~L~~L~l~~~~~~~~----~~~~~~~l~~L~~L~l~~~~i~~~----------~~~~~~~l~~L~~L~l~ 85 (350)
.+...+.+...++.|++++|.+... +...+...+.|+.++++++..... +...+..+++|++|+++
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~ 101 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 101 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccc
Confidence 4555667789999999999987643 234567789999999988754321 12345678899999999
Q ss_pred cccccCCCC----ccccCCCCCcEEEccCCccccccCc-------------cccCCCCCCEEEcccCccccccc----hh
Q 018826 86 NNTLGGPIP----STLFRLTNLEVLYLGFNQFNGTIPR-------------EIGHLKNLTYLFIKVNKLTGAIR----ST 144 (350)
Q Consensus 86 ~n~~~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~-------------~l~~l~~L~~L~l~~n~~~~~~~----~~ 144 (350)
+|.+..... ..+...++|++|++++|.+...... .....+.|+.+.+++|.+..... ..
T Consensus 102 ~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~ 181 (344)
T d2ca6a1 102 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 181 (344)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred ccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccch
Confidence 998865422 2344578999999999987532111 11356889999999998875432 23
Q ss_pred hhccCCccEEecCCCccccC-----ccccccCCCCCCEEEccCCccccc----CCcccCCCCCCCEEECCCCcCccccch
Q 018826 145 LGQLTSLLQLDLSSNQLHSS-----IPLEIGNLSALEELDLSDNKIHGI----IPDELTKLSQLKNLNISSNLLSGQIPS 215 (350)
Q Consensus 145 ~~~~~~L~~L~l~~n~~~~~-----~~~~l~~~~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~~~~~~~~ 215 (350)
+...+.|+.|++++|.+... ....+...+.|+.|++++|.++.. ....+...++|++|++++|.+++....
T Consensus 182 l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~ 261 (344)
T d2ca6a1 182 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 261 (344)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred hhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhH
Confidence 56678999999999987642 234567789999999999988643 234567889999999999998854332
Q ss_pred ----hhhC--CCCCCEEEccCCcccccC----Ccccc-CCCCCCEEECCCCcCccc
Q 018826 216 ----AIGK--LFNLKYLDLSKNKLGGSI----PTEIG-NCSELKNLTLNHNSLDGT 260 (350)
Q Consensus 216 ----~~~~--~~~L~~L~l~~n~i~~~~----~~~~~-~~~~L~~L~l~~n~i~~~ 260 (350)
.+.. .++|++|++++|.|+... ...+. .++.|+.|++++|++...
T Consensus 262 ~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 262 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 3333 467999999999997532 22332 468999999999999754
No 28
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=3.5e-17 Score=148.58 Aligned_cols=279 Identities=22% Similarity=0.187 Sum_probs=181.0
Q ss_pred CCCCccee----cCCcccCCCCCcCEEEccCCcCCCC----CCcccC-CCCCCCEEEccCCcCCCC----cchhccCCCC
Q 018826 12 QPYTENTC----TIPKEIGSLRNLEVLDLVSNNLNGT----IPKEIG-TLRNLMGLHLSSNNLTGE----LPQEIENLKS 78 (350)
Q Consensus 12 ~~~~~~~~----~~~~~~~~l~~L~~L~l~~~~~~~~----~~~~~~-~l~~L~~L~l~~~~i~~~----~~~~~~~l~~ 78 (350)
+.+|.++. .+...+..+++|+.|++++|.+++. +.+.+. ...+|++|++++|++++. ++..+..+++
T Consensus 34 L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~ 113 (460)
T d1z7xw1 34 LDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPT 113 (460)
T ss_dssp EESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTT
T ss_pred eCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccccccchhhcccc
Confidence 44565552 4556678899999999999988632 122232 345799999999998753 3456778899
Q ss_pred CcEEecccccccCCCCc---------------------------------cccCCCCCcEEEccCCccccc---------
Q 018826 79 LIRLFVRNNTLGGPIPS---------------------------------TLFRLTNLEVLYLGFNQFNGT--------- 116 (350)
Q Consensus 79 L~~L~l~~n~~~~~~~~---------------------------------~~~~l~~L~~L~l~~n~l~~~--------- 116 (350)
|++|++++|.+...... .+.....++.+.++.+.....
T Consensus 114 L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l 193 (460)
T d1z7xw1 114 LQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGL 193 (460)
T ss_dssp CCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHH
T ss_pred ccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccccccccccccccccccccccccccccccccccc
Confidence 99999999876421000 011124555555554332210
Q ss_pred ------------------------cCccccCCCCCCEEEcccCccccc-----cchhhhccCCccEEecCCCccccC---
Q 018826 117 ------------------------IPREIGHLKNLTYLFIKVNKLTGA-----IRSTLGQLTSLLQLDLSSNQLHSS--- 164 (350)
Q Consensus 117 ------------------------~~~~l~~l~~L~~L~l~~n~~~~~-----~~~~~~~~~~L~~L~l~~n~~~~~--- 164 (350)
....+...+.++.+.++.+.+... ..........++.+++++|.+...
T Consensus 194 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~ 273 (460)
T d1z7xw1 194 KDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCG 273 (460)
T ss_dssp HHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH
T ss_pred ccccccccccccccccccchhhhcccccccccccccccchhhccccccccchhhcccccccccccccccccccccccccc
Confidence 000112345667777766654321 112234456899999999877532
Q ss_pred -ccccccCCCCCCEEEccCCcccccCCcc-----cCCCCCCCEEECCCCcCccccch----hhhCCCCCCEEEccCCccc
Q 018826 165 -IPLEIGNLSALEELDLSDNKIHGIIPDE-----LTKLSQLKNLNISSNLLSGQIPS----AIGKLFNLKYLDLSKNKLG 234 (350)
Q Consensus 165 -~~~~l~~~~~L~~L~l~~n~~~~~~~~~-----~~~~~~L~~L~l~~n~~~~~~~~----~~~~~~~L~~L~l~~n~i~ 234 (350)
....+...+.++.+++++|.+++..... ......|+.++++++.++..... .+...++|++|++++|.++
T Consensus 274 ~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~ 353 (460)
T d1z7xw1 274 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLE 353 (460)
T ss_dssp HHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCH
T ss_pred cccccccccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeeccc
Confidence 2234556788999999999886432221 12346899999999988754333 3456678999999999997
Q ss_pred cc----CCccc-cCCCCCCEEECCCCcCccc----CchhhcccCCCCEEEccccccccccCCccc
Q 018826 235 GS----IPTEI-GNCSELKNLTLNHNSLDGT----IRPEMGEILLLQNLDLSHNNLSGTITKTLC 290 (350)
Q Consensus 235 ~~----~~~~~-~~~~~L~~L~l~~n~i~~~----~~~~~~~~~~L~~L~l~~N~i~~~~p~~~~ 290 (350)
+. ++..+ ...+.|++|++++|.|+.. +...+...++|++|++++|+|+..+...+.
T Consensus 354 ~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~ 418 (460)
T d1z7xw1 354 DAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLV 418 (460)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHH
T ss_pred CcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHH
Confidence 53 22223 2457899999999999743 334456679999999999999876665553
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=4e-15 Score=115.17 Aligned_cols=128 Identities=23% Similarity=0.163 Sum_probs=80.0
Q ss_pred cCCCCCcCEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCc
Q 018826 25 IGSLRNLEVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLE 104 (350)
Q Consensus 25 ~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 104 (350)
|.++.+++.|++++|.++.. ++.+..+++|+.|++++|.++.. + .|..+++|++|++++|.+....+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~l-~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL-D-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE-C-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCcc-C-CcccCcchhhhhcccccccCCCccccccccccc
Confidence 44566777777777777644 44455677777777777777633 2 366677777777777777655554455677777
Q ss_pred EEEccCCccccccC-ccccCCCCCCEEEcccCcccccc---chhhhccCCccEEe
Q 018826 105 VLYLGFNQFNGTIP-REIGHLKNLTYLFIKVNKLTGAI---RSTLGQLTSLLQLD 155 (350)
Q Consensus 105 ~L~l~~n~l~~~~~-~~l~~l~~L~~L~l~~n~~~~~~---~~~~~~~~~L~~L~ 155 (350)
+|++.+|.+..... ..+..+++|+++++++|.+.... ...+..+|+|+.|+
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 77777777664321 34566677777777776665432 12345566666655
No 30
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=9e-15 Score=113.16 Aligned_cols=128 Identities=21% Similarity=0.196 Sum_probs=89.5
Q ss_pred hhccCCccEEecCCCccccCccccccCCCCCCEEEccCCcccccCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCC
Q 018826 145 LGQLTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLK 224 (350)
Q Consensus 145 ~~~~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~ 224 (350)
+.+..+++.|++++|++.. ++..+..++.|+.|++++|.++.. +.+..+++|++|++++|.+++..+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccc
Confidence 3445566777777777653 344445667777888888777754 3467778888888888888766555667788888
Q ss_pred EEEccCCcccccC-CccccCCCCCCEEECCCCcCcccCc---hhhcccCCCCEEE
Q 018826 225 YLDLSKNKLGGSI-PTEIGNCSELKNLTLNHNSLDGTIR---PEMGEILLLQNLD 275 (350)
Q Consensus 225 ~L~l~~n~i~~~~-~~~~~~~~~L~~L~l~~n~i~~~~~---~~~~~~~~L~~L~ 275 (350)
.|++++|++++.. ...+..+++|++|++++|.++.... ..+..+|+|++||
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 8888888887431 1356778888888888888874431 2466778888887
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.52 E-value=7.9e-14 Score=102.59 Aligned_cols=118 Identities=24% Similarity=0.253 Sum_probs=82.9
Q ss_pred CEEEccCCcCCCCCCcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEccCC
Q 018826 32 EVLDLVSNNLNGTIPKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLGFN 111 (350)
Q Consensus 32 ~~L~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n 111 (350)
++|++++|.++.. + .+..+++|++|++++|.++ .+|..|..+++|++|++++|.++.. + .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~~l-~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTVL-C-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSSC-C-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCCC-c-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-C-ccccccccCeEECCCC
Confidence 5688888888743 3 3777888888888888887 4566677888888888888888743 3 4777888888888888
Q ss_pred cccccc-CccccCCCCCCEEEcccCccccc---cchhhhccCCccEE
Q 018826 112 QFNGTI-PREIGHLKNLTYLFIKVNKLTGA---IRSTLGQLTSLLQL 154 (350)
Q Consensus 112 ~l~~~~-~~~l~~l~~L~~L~l~~n~~~~~---~~~~~~~~~~L~~L 154 (350)
.+.... ...+..+++|+++++++|.+... .......+|+|+.+
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 887443 24567778888888888776532 12233445555554
No 32
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.51 E-value=8.7e-14 Score=102.37 Aligned_cols=103 Identities=26% Similarity=0.340 Sum_probs=65.9
Q ss_pred CEEEccCCcccccCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCC
Q 018826 176 EELDLSDNKIHGIIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHN 255 (350)
Q Consensus 176 ~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n 255 (350)
+.|++++|.++.. + .+..+++|++|++++|.++ .+|..+..+++|+.|++++|.+++ .+ .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~~l-~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTVL-C-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSSC-C-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCCC-c-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 3566667666633 2 3566667777777777776 345556667777777777777763 33 3566777777777777
Q ss_pred cCcccCc-hhhcccCCCCEEEcccccccc
Q 018826 256 SLDGTIR-PEMGEILLLQNLDLSHNNLSG 283 (350)
Q Consensus 256 ~i~~~~~-~~~~~~~~L~~L~l~~N~i~~ 283 (350)
+++.... ..+..+++|+.+++++|++++
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 7764432 345666777777777777653
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.40 E-value=3.3e-13 Score=103.50 Aligned_cols=110 Identities=23% Similarity=0.178 Sum_probs=87.3
Q ss_pred CCCCCCEEEccCCcccccCCcccCCCCCCCEEECCCC-cCccccchhhhCCCCCCEEEccCCcccccCCccccCCCCCCE
Q 018826 171 NLSALEELDLSDNKIHGIIPDELTKLSQLKNLNISSN-LLSGQIPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKN 249 (350)
Q Consensus 171 ~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n-~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~ 249 (350)
.+...+.++.+++.+.. .+..+..+++|++|+++++ .++.+.+.+|..+++|+.|++++|+|+...+.+|..+++|++
T Consensus 6 ~c~~~~~l~c~~~~~~~-~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~ 84 (156)
T d2ifga3 6 CPHGSSGLRCTRDGALD-SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (156)
T ss_dssp CCSSSSCEECCSSCCCT-TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CcCCCCeEEecCCCCcc-CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccc
Confidence 34456678888877763 4566788889999999766 487777778899999999999999998777888889999999
Q ss_pred EECCCCcCcccCchhhcccCCCCEEEccccccc
Q 018826 250 LTLNHNSLDGTIRPEMGEILLLQNLDLSHNNLS 282 (350)
Q Consensus 250 L~l~~n~i~~~~~~~~~~~~~L~~L~l~~N~i~ 282 (350)
|++++|+++...+..+ ...+|+.|++++|.+.
T Consensus 85 L~Ls~N~l~~l~~~~~-~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 85 LNLSFNALESLSWKTV-QGLSLQELVLSGNPLH 116 (156)
T ss_dssp EECCSSCCSCCCSTTT-CSCCCCEEECCSSCCC
T ss_pred eeccCCCCcccChhhh-ccccccccccCCCccc
Confidence 9999999985554444 4457999999999774
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=5.9e-12 Score=96.34 Aligned_cols=109 Identities=22% Similarity=0.186 Sum_probs=90.8
Q ss_pred cCCccEEecCCCccccCccccccCCCCCCEEEccCCc-ccccCCcccCCCCCCCEEECCCCcCccccchhhhCCCCCCEE
Q 018826 148 LTSLLQLDLSSNQLHSSIPLEIGNLSALEELDLSDNK-IHGIIPDELTKLSQLKNLNISSNLLSGQIPSAIGKLFNLKYL 226 (350)
Q Consensus 148 ~~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~n~-~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 226 (350)
+.....++..++.+. ..+..+...+++++|++.+++ ++.+.+.+|.++++|+.|++++|+++.+.+.+|..+++|++|
T Consensus 7 c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L 85 (156)
T d2ifga3 7 PHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRL 85 (156)
T ss_dssp CSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEE
T ss_pred cCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccce
Confidence 344567888887776 566778888999999998764 887778889999999999999999998888899999999999
Q ss_pred EccCCcccccCCccccCCCCCCEEECCCCcCc
Q 018826 227 DLSKNKLGGSIPTEIGNCSELKNLTLNHNSLD 258 (350)
Q Consensus 227 ~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~ 258 (350)
+|++|+++...+..+. ...|+.|++++|.+.
T Consensus 86 ~Ls~N~l~~l~~~~~~-~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 86 NLSFNALESLSWKTVQ-GLSLQELVLSGNPLH 116 (156)
T ss_dssp ECCSSCCSCCCSTTTC-SCCCCEEECCSSCCC
T ss_pred eccCCCCcccChhhhc-cccccccccCCCccc
Confidence 9999999954455554 457999999999986
No 35
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.26 E-value=2.5e-14 Score=114.52 Aligned_cols=129 Identities=27% Similarity=0.324 Sum_probs=81.3
Q ss_pred CcccCCCCCCCEEEccCCcCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEccCCccccccCccccCCC
Q 018826 46 PKEIGTLRNLMGLHLSSNNLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLK 125 (350)
Q Consensus 46 ~~~~~~l~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 125 (350)
+..+..+++|++|++++|.++.. + .+..+++|++|++++|.+.. ++..+..+++|+.|++.+|.++.. ..+..++
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~ 115 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIASL--SGIEKLV 115 (198)
T ss_dssp HHHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEECSEEECCCH--HHHHHHH
T ss_pred hhHHhcccccceeECcccCCCCc-c-cccCCccccChhhccccccc-cccccccccccccccccccccccc--ccccccc
Confidence 34566677777777777777643 2 36667777777777777663 333333445677777777777643 3456667
Q ss_pred CCCEEEcccCccccccc-hhhhccCCccEEecCCCccccCccc----------cccCCCCCCEEE
Q 018826 126 NLTYLFIKVNKLTGAIR-STLGQLTSLLQLDLSSNQLHSSIPL----------EIGNLSALEELD 179 (350)
Q Consensus 126 ~L~~L~l~~n~~~~~~~-~~~~~~~~L~~L~l~~n~~~~~~~~----------~l~~~~~L~~L~ 179 (350)
+|+.|++++|.+..... ..+..+++|+.|++++|.+....+. .+..+++|+.||
T Consensus 116 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 116 NLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred cccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 77777777777765432 3566777777777777765432221 144567777776
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.25 E-value=1.7e-13 Score=109.58 Aligned_cols=127 Identities=23% Similarity=0.277 Sum_probs=82.6
Q ss_pred CCEEEccCC--cCCCCcchhccCCCCCcEEecccccccCCCCccccCCCCCcEEEccCCccccccCccccCCCCCCEEEc
Q 018826 55 LMGLHLSSN--NLTGELPQEIENLKSLIRLFVRNNTLGGPIPSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYLFI 132 (350)
Q Consensus 55 L~~L~l~~~--~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 132 (350)
.+.+++.+. .+. .++..+..+++|++|++++|.+... + .+..+++|++|++++|.++. ++.....+++|++|++
T Consensus 25 ~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~~-i~~~~~~~~~L~~L~l 100 (198)
T d1m9la_ 25 AEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWI 100 (198)
T ss_dssp CSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEECS-CSSHHHHHHHCCEEEC
T ss_pred cceeeeecccCchh-hhhhHHhcccccceeECcccCCCCc-c-cccCCccccChhhccccccc-cccccccccccccccc
Confidence 445555443 222 4456677788888888888887744 2 46778888888888888774 3333444567778888
Q ss_pred ccCccccccchhhhccCCccEEecCCCccccCcc-ccccCCCCCCEEEccCCcccc
Q 018826 133 KVNKLTGAIRSTLGQLTSLLQLDLSSNQLHSSIP-LEIGNLSALEELDLSDNKIHG 187 (350)
Q Consensus 133 ~~n~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~-~~l~~~~~L~~L~l~~n~~~~ 187 (350)
++|.+... ..+..+++|+.|++++|.+.+... ..+..+++|+.|++++|.+..
T Consensus 101 ~~N~i~~l--~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 101 SYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp SEEECCCH--HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred cccccccc--ccccccccccccccccchhccccccccccCCCccceeecCCCcccc
Confidence 87777654 346667777777777777653221 345666667777776666543
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39 E-value=9e-09 Score=78.72 Aligned_cols=82 Identities=33% Similarity=0.332 Sum_probs=48.0
Q ss_pred CCCCCCCEEECCCCcCccc--cchhhhCCCCCCEEEccCCcccccCCccccCCCCCCEEECCCCcCcccCc-------hh
Q 018826 194 TKLSQLKNLNISSNLLSGQ--IPSAIGKLFNLKYLDLSKNKLGGSIPTEIGNCSELKNLTLNHNSLDGTIR-------PE 264 (350)
Q Consensus 194 ~~~~~L~~L~l~~n~~~~~--~~~~~~~~~~L~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~i~~~~~-------~~ 264 (350)
..+++|+.|++++|.++.. .+..+..+++|+.|++++|.|++.....+.....|+.|++++|.+..... ..
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHH
Confidence 3456677777777776643 23445566777777777777764322222234567777777777764332 12
Q ss_pred hcccCCCCEEE
Q 018826 265 MGEILLLQNLD 275 (350)
Q Consensus 265 ~~~~~~L~~L~ 275 (350)
+..+|+|+.||
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
Confidence 44567777665
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.32 E-value=2.2e-08 Score=76.56 Aligned_cols=65 Identities=26% Similarity=0.251 Sum_probs=28.4
Q ss_pred cCCCCCcEEecccccccCCC--CccccCCCCCcEEEccCCccccccCccccCCCCCCEEEcccCccc
Q 018826 74 ENLKSLIRLFVRNNTLGGPI--PSTLFRLTNLEVLYLGFNQFNGTIPREIGHLKNLTYLFIKVNKLT 138 (350)
Q Consensus 74 ~~l~~L~~L~l~~n~~~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 138 (350)
..+++|++|++++|.++... +..+..+++|+.|++++|.+.....-.+.....|+.+++++|.+.
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence 34555555555555554321 122333455555555555544322212222334444444444443
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.07 E-value=2.3e-06 Score=65.26 Aligned_cols=89 Identities=10% Similarity=0.122 Sum_probs=48.9
Q ss_pred cCCCCCCCEEECCCCcCccc----cchhhhCCCCCCEEEccCCccccc----CCccccCCCCCCEEECCCCcCccc----
Q 018826 193 LTKLSQLKNLNISSNLLSGQ----IPSAIGKLFNLKYLDLSKNKLGGS----IPTEIGNCSELKNLTLNHNSLDGT---- 260 (350)
Q Consensus 193 ~~~~~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~i~~~----~~~~~~~~~~L~~L~l~~n~i~~~---- 260 (350)
+...+.|++|++++|.+... +...+...+.|++|++++|.+++. +..++...++|++|++++|.+...
T Consensus 40 L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~ 119 (167)
T d1pgva_ 40 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 119 (167)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHH
Confidence 34445566666666655421 223344456666666666666542 222345556677777776655422
Q ss_pred ---CchhhcccCCCCEEEcccccc
Q 018826 261 ---IRPEMGEILLLQNLDLSHNNL 281 (350)
Q Consensus 261 ---~~~~~~~~~~L~~L~l~~N~i 281 (350)
+...+...++|+.|+++.+..
T Consensus 120 ~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 120 EMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHhCCCccEeeCcCCCc
Confidence 223344567777777766543
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.88 E-value=8.7e-06 Score=61.89 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=27.1
Q ss_pred CCCCCEEECCCCcCccc----cchhhhCCCCCCEEEccCCccccc-------CCccccCCCCCCEEECCCC
Q 018826 196 LSQLKNLNISSNLLSGQ----IPSAIGKLFNLKYLDLSKNKLGGS-------IPTEIGNCSELKNLTLNHN 255 (350)
Q Consensus 196 ~~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~i~~~-------~~~~~~~~~~L~~L~l~~n 255 (350)
.+.|++|++++|.++.. +...+...++|++|++++|.+... +...+...++|+.|+++.+
T Consensus 71 n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 71 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred cccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCC
Confidence 34455555555554422 122334445555555555543311 1222333455666665554
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.45 E-value=1.8e-05 Score=60.05 Aligned_cols=88 Identities=16% Similarity=0.216 Sum_probs=44.7
Q ss_pred cCCCCCCCEEECCCCcCccc----cchhhhCCCCCCEEEccCCccccc----CCccccCCCCCCEEEC--CCCcCcc---
Q 018826 193 LTKLSQLKNLNISSNLLSGQ----IPSAIGKLFNLKYLDLSKNKLGGS----IPTEIGNCSELKNLTL--NHNSLDG--- 259 (350)
Q Consensus 193 ~~~~~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~i~~~----~~~~~~~~~~L~~L~l--~~n~i~~--- 259 (350)
+...++|++|++++|.++.. +...+...++++.+++++|.+++. +...+...++|+.+++ ++|.+..
T Consensus 42 l~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~ 121 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVE 121 (166)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHH
T ss_pred HhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHH
Confidence 34455566666666655432 222334455666666666665432 2233445566665444 3445532
Q ss_pred -cCchhhcccCCCCEEEccccc
Q 018826 260 -TIRPEMGEILLLQNLDLSHNN 280 (350)
Q Consensus 260 -~~~~~~~~~~~L~~L~l~~N~ 280 (350)
.+...+...++|+.|+++.+.
T Consensus 122 ~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 122 MEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp HHHHHHHHHCSSCCEEECCCSS
T ss_pred HHHHHHHHhCCCcCEEeCcCCC
Confidence 122334456667777766554
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.30 E-value=2.3e-05 Score=59.35 Aligned_cols=89 Identities=18% Similarity=0.298 Sum_probs=45.0
Q ss_pred ccCCCCCCEEEccCCcccccC----CcccCCCCCCCEEECCCCcCccc----cchhhhCCCCCCEEEcc--CCccccc--
Q 018826 169 IGNLSALEELDLSDNKIHGII----PDELTKLSQLKNLNISSNLLSGQ----IPSAIGKLFNLKYLDLS--KNKLGGS-- 236 (350)
Q Consensus 169 l~~~~~L~~L~l~~n~~~~~~----~~~~~~~~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~--~n~i~~~-- 236 (350)
+...+.|++|++++|.++... ...+...++++.++++++.++.. +...+...++|+.++|. +|.+.+.
T Consensus 42 l~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~ 121 (166)
T d1io0a_ 42 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVE 121 (166)
T ss_dssp HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHH
T ss_pred HhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHH
Confidence 334455555555555543321 12233445666666666655432 22344555666665443 4455431
Q ss_pred --CCccccCCCCCCEEECCCCcC
Q 018826 237 --IPTEIGNCSELKNLTLNHNSL 257 (350)
Q Consensus 237 --~~~~~~~~~~L~~L~l~~n~i 257 (350)
+...+...++|+.|+++.+..
T Consensus 122 ~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 122 MEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHhCCCcCEEeCcCCCC
Confidence 223344567777777766543
No 43
>d1x62a2 g.39.1.3 (A:8-42) PDZ and LIM domain protein 1 Elfin {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.63 E-value=1.9 Score=21.28 Aligned_cols=22 Identities=27% Similarity=0.768 Sum_probs=15.7
Q ss_pred CCccccccccccceeeeeeecC
Q 018826 329 ELPRMEMCFRCGIMVVKFYMKI 350 (350)
Q Consensus 329 ~~~~~~~c~~c~~~~~~~~~~~ 350 (350)
.....|.|+.|...++...+++
T Consensus 4 ~~qklp~CdkCg~GIVG~~VK~ 25 (35)
T d1x62a2 4 NAQKLPMCDKCGTGIVGVFVKL 25 (35)
T ss_dssp CCCCCCCCSSSCCCCCSSCEEC
T ss_pred ccccCccccccCCCcEeEEEEe
Confidence 4566788899988777666553
No 44
>d1x64a1 g.39.1.3 (A:8-52) PDZ and LIM domain protein 3, PDLIM3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.99 E-value=3 Score=22.14 Aligned_cols=26 Identities=31% Similarity=0.553 Sum_probs=19.3
Q ss_pred ccCCCCccccccccccceeeeeeecC
Q 018826 325 GHVEELPRMEMCFRCGIMVVKFYMKI 350 (350)
Q Consensus 325 ~~~~~~~~~~~c~~c~~~~~~~~~~~ 350 (350)
...+.....+.|+.|.-.++..++++
T Consensus 10 ~~~~~~QkLP~CdkCg~GIVG~~VK~ 35 (45)
T d1x64a1 10 GGAGSAQRMPLCDKCGSGIVGAVVKA 35 (45)
T ss_dssp CCCSCCCSCCBCTTTCCBCCSCCEES
T ss_pred CCCCccccCccccccCCCcEEEEEEe
Confidence 34556778899999998877766654
Done!