Your job contains 1 sequence.
>018828
MTVLTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDANKVGR
IQVIAFQSSDGKQNHISKPIALLPVNKSTVIDLESSLSSSESLSARSGNVLAENPEQDTG
DSKIVAGSWKGGGRTSELGGFFANVDANHPERARTGGNYQTGDLSNAIGDIDPMDMSESM
QEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAI
MQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKS
LESEAFKGSDSSLSSPHHSPSHGLRGSAYFHTSSDVRTAPGSGSRSRRGL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018828
(350 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2016279 - symbol:BRCC36A "AT1G80210" species:3... 1062 1.3e-109 2
TAIR|locus:2083318 - symbol:BRCC36B "AT3G06820" species:3... 1031 9.2e-107 2
UNIPROTKB|Q4VA72 - symbol:brcc3 "Lys-63-specific deubiqui... 274 9.3e-38 2
UNIPROTKB|Q66GV6 - symbol:brcc3 "Lys-63-specific deubiqui... 274 1.5e-37 2
UNIPROTKB|B5X8M4 - symbol:brcc3 "Lys-63-specific deubiqui... 269 1.3e-36 2
MGI|MGI:2389572 - symbol:Brcc3 "BRCA1/BRCA2-containing co... 273 2.7e-36 2
UNIPROTKB|F1RZ41 - symbol:BRCC36 "Uncharacterized protein... 272 3.5e-36 2
RGD|1588543 - symbol:Brcc3 "BRCA1/BRCA2-containing comple... 271 1.2e-35 2
UNIPROTKB|F1P4L2 - symbol:BRCC3 "Uncharacterized protein"... 269 1.5e-35 2
UNIPROTKB|P46736 - symbol:BRCC3 "Lys-63-specific deubiqui... 268 3.9e-35 2
UNIPROTKB|B0KWU8 - symbol:BRCC3 "Lys-63-specific deubiqui... 268 3.9e-35 2
UNIPROTKB|A5PJP6 - symbol:BRCC3 "Lys-63-specific deubiqui... 268 1.0e-34 2
UNIPROTKB|G5E595 - symbol:BRCC3 "Lys-63-specific deubiqui... 268 1.0e-34 2
MGI|MGI:3647286 - symbol:Gm5136 "predicted gene 5136" spe... 254 4.4e-34 2
UNIPROTKB|Q5R9L6 - symbol:BRCC3 "Lys-63-specific deubiqui... 268 3.3e-30 2
>TAIR|locus:2016279 [details] [associations]
symbol:BRCC36A "AT1G80210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair" evidence=IMP]
[GO:0006310 "DNA recombination" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0006281 GO:GO:0006310 KO:K11864
eggNOG:NOG322509 UniGene:At.33958 UniGene:At.50812 MEROPS:M67.A03
EMBL:AY093768 EMBL:BT002265 IPI:IPI00536421 RefSeq:NP_178138.2
ProteinModelPortal:Q8RW94 SMR:Q8RW94 PRIDE:Q8RW94
EnsemblPlants:AT1G80210.1 GeneID:844361 KEGG:ath:AT1G80210
TAIR:At1g80210 HOGENOM:HOG000005846 InParanoid:Q8RW94 OMA:QEAMHRS
PhylomeDB:Q8RW94 ProtClustDB:CLSN2680823 Genevestigator:Q8RW94
Uniprot:Q8RW94
Length = 406
Score = 1062 (378.9 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 213/308 (69%), Positives = 243/308 (78%)
Query: 1 MTVLTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDANKVGR 60
MT+ TGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD+GFIGLIFSCFSEDANKVGR
Sbjct: 82 MTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCFSEDANKVGR 141
Query: 61 IQVIAFQSSDGKQNHISKPIALLPVNKSTVIDXXXXXXXXXXXXARSGNVLAENPEQDTG 120
IQVIAFQSSDGK N I K ++L+ NK +VID RS + +NPE DT
Sbjct: 142 IQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDLESSFSSSDSIYQRSSSARGDNPELDTS 201
Query: 121 DSKIVAGSWKGGGRTSELGGFFAN-VDANHPERARTGGNYQTGDLSNAIGDIDPMDMSES 179
D+ +GS KGGGR S+ FF N +AN+ R T GNY S AI +ID MDMSES
Sbjct: 202 DTATTSGS-KGGGRVSDFEAFFVNNTEANNTRRDGTSGNYS----STAI-EIDSMDMSES 255
Query: 180 MQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQA 239
MQEAMHRSNL+ SG YVRKE+PLHVLPTSSLL+L+SPL SF LQRVLYEEERAAY+Q+
Sbjct: 256 MQEAMHRSNLETSGVGYVRKEVPLHVLPTSSLLQLNSPLASFKSLQRVLYEEERAAYHQS 315
Query: 240 IMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAK 299
+ Q+ DG+VHPL +IH+TSTYQASMCKLIEYCLSPAI+ALQDRLKEN+IRLAML DEA+
Sbjct: 316 VQQSKRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINALQDRLKENKIRLAMLMDEAE 375
Query: 300 SLESEAFK 307
LE++ K
Sbjct: 376 VLEAQKLK 383
Score = 41 (19.5 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 337 RTAPGSGSRSRR 348
R GSGSRSRR
Sbjct: 393 RLVHGSGSRSRR 404
>TAIR|locus:2083318 [details] [associations]
symbol:BRCC36B "AT3G06820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002686 GO:GO:0006281 KO:K11864
IPI:IPI00538324 RefSeq:NP_001078118.1 UniGene:At.40457
ProteinModelPortal:F4JC55 SMR:F4JC55 MEROPS:M67.A03 PRIDE:F4JC55
EnsemblPlants:AT3G06820.2 GeneID:819866 KEGG:ath:AT3G06820
Uniprot:F4JC55
Length = 405
Score = 1031 (368.0 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 211/308 (68%), Positives = 241/308 (78%)
Query: 1 MTVLTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDANKVGR 60
MT+ TGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD+GFIGLIFSCFSEDANKVGR
Sbjct: 82 MTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFIGLIFSCFSEDANKVGR 141
Query: 61 IQVIAFQSSDGKQNHISKPIALLPVNKSTVIDXXXXXXXXXXXXARSGNVLAENPEQDTG 120
IQVIAFQSSDGK N I K ++L+ NK +VID RS + PE DT
Sbjct: 142 IQVIAFQSSDGKPNSIPKSMSLVLANKDSVIDIESSSSSSDSIYQRSSS---SKPELDTI 198
Query: 121 DSKIVAGSWKGGGRTSELGGFFAN-VDANHPERARTGGNYQTGDLSNAIGDIDPMDMSES 179
D+ +GS KGGGR S+ G FF N ++AN R T +++G+LS+ ID MDMSES
Sbjct: 199 DTATTSGS-KGGGRVSDFGPFFTNNIEANITGRDET---HKSGNLSSTTIGIDSMDMSES 254
Query: 180 MQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQA 239
MQEAM RSNLD SGA YVRKE+PLHVLPTSSLL ++SPL SF LQRVLYEEERAAY Q+
Sbjct: 255 MQEAMLRSNLDTSGAGYVRKEVPLHVLPTSSLLPVNSPLASFKSLQRVLYEEERAAYYQS 314
Query: 240 IMQNMSDGKVHPLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAK 299
+ QNM DG+VHPL +IH+TSTYQASMCKLIEYCLSPAI+ALQDR KEN+IRLAML DEA+
Sbjct: 315 VQQNMRDGRVHPLAFIHNTSTYQASMCKLIEYCLSPAINALQDRQKENKIRLAMLMDEAE 374
Query: 300 SLESEAFK 307
LE++ K
Sbjct: 375 VLEAQKLK 382
Score = 45 (20.9 bits), Expect = 9.2e-107, Sum P(2) = 9.2e-107
Identities = 9/9 (100%), Positives = 9/9 (100%)
Query: 341 GSGSRSRRG 349
GSGSRSRRG
Sbjct: 396 GSGSRSRRG 404
>UNIPROTKB|Q4VA72 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0031593
"polyubiquitin binding" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0070531 "BRCA1-A
complex" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=ISS] [GO:0070552 "BRISC complex"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509
HOGENOM:HOG000007866 EMBL:CR760965 EMBL:BC096514
RefSeq:NP_001016457.1 UniGene:Str.51157 ProteinModelPortal:Q4VA72
STRING:Q4VA72 GeneID:549211 KEGG:xtr:549211 Xenbase:XB-GENE-5812885
Uniprot:Q4VA72
Length = 261
Score = 274 (101.5 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 53/88 (60%), Positives = 64/88 (72%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
+TGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GRI
Sbjct: 80 ITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLIFSCFIEDKNTKTGRIL 139
Query: 63 VIAFQSSDGKQN----HISKPIALLPVN 86
FQS +++ I P+ ++P N
Sbjct: 140 YTCFQSVQAQKSSEYERIEVPLHVVPHN 167
Score = 147 (56.8 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 194 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 253
+EY R E+PLHV+P +++ K+ L S +L R+L +EE+ AY + S G + +T
Sbjct: 152 SEYERIEVPLHVVPHNTIRKVC--LESAVELPRILCQEEQDAYRRI----HSLGHLDSIT 205
Query: 254 YIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
IH+ S + ++C + P + L+DRL++N+ R L E + L E
Sbjct: 206 KIHNGSVFTKNLCGQMSAISGPLLQWLEDRLEQNQQRAQELQSEKEQLLQE 256
>UNIPROTKB|Q66GV6 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 MEROPS:M67.004
CTD:79184 EMBL:BC082208 RefSeq:NP_001087827.1 UniGene:Xl.13095
ProteinModelPortal:Q66GV6 GeneID:447688 KEGG:xla:447688
Xenbase:XB-GENE-5812935 Uniprot:Q66GV6
Length = 261
Score = 274 (101.5 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 53/88 (60%), Positives = 64/88 (72%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
+TGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GRI
Sbjct: 80 ITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLIFSCFIEDKNTKTGRIL 139
Query: 63 VIAFQSSDGKQN----HISKPIALLPVN 86
FQS +++ I P+ ++P N
Sbjct: 140 YTCFQSVQAQKSSEYERIEVPLHVVPHN 167
Score = 145 (56.1 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
Identities = 37/111 (33%), Positives = 61/111 (54%)
Query: 194 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 253
+EY R E+PLHV+P +++ K+ L S +L R+L +EE+ AY + S G + +T
Sbjct: 152 SEYERIEVPLHVVPHNTIRKVC--LESAVELPRILCQEEQDAYRRI----HSLGHLDSIT 205
Query: 254 YIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
IH+ S + ++C + P + L+DRL++N R L E + L E
Sbjct: 206 KIHNGSVFTKNLCGQMSAISGPLLQWLEDRLEQNRQRAQELQSEKEQLLQE 256
>UNIPROTKB|B5X8M4 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8030 "Salmo salar" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 GO:GO:0070537 MEROPS:M67.004 CTD:79184
EMBL:BT047393 RefSeq:NP_001134356.1 UniGene:Ssa.10060
ProteinModelPortal:B5X8M4 GeneID:100195855 Uniprot:B5X8M4
Length = 260
Score = 269 (99.8 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 52/86 (60%), Positives = 62/86 (72%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
+TGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GR+
Sbjct: 80 MTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVL 139
Query: 63 VIAFQSSDGKQN----HISKPIALLP 84
FQS ++ I PI ++P
Sbjct: 140 YTCFQSVQAQKGSEYERIEIPIHVVP 165
Score = 141 (54.7 bits), Expect = 1.3e-36, Sum P(2) = 1.3e-36
Identities = 35/112 (31%), Positives = 63/112 (56%)
Query: 193 GAEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPL 252
G+EY R EIP+HV+P ++ K+ L S +L R+L +EE+ Y + + +++ + P+
Sbjct: 151 GSEYERIEIPIHVVPHEAIGKVC--LESAVELPRILCQEEQDTYRK--IHSLTH--LDPI 204
Query: 253 TYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
T IH+ S + ++C + P + L+DRL++N + L E + L E
Sbjct: 205 TKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNRQSVIELQLEKERLTQE 256
>MGI|MGI:2389572 [details] [associations]
symbol:Brcc3 "BRCA1/BRCA2-containing complex, subunit 3"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=ISO] [GO:0010165 "response to X-ray"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=ISO] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050790 "regulation of catalytic activity" evidence=ISO]
[GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=ISO] [GO:0070537 "histone H2A
K63-linked deubiquitination" evidence=ISO] [GO:0070552 "BRISC
complex" evidence=ISO] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:2389572 GO:GO:0030234 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0010212 GO:GO:0006302
GO:GO:0031593 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509
HOGENOM:HOG000007866 HOVERGEN:HBG002142 GO:GO:0000152 EMBL:S68022
EMBL:AK011876 EMBL:AK149844 EMBL:AL671860 EMBL:BC021313
EMBL:BC048179 IPI:IPI00137103 IPI:IPI00880818 RefSeq:NP_001159929.1
RefSeq:NP_001159931.1 RefSeq:NP_666068.1 UniGene:Mm.226957
ProteinModelPortal:P46737 SMR:P46737 STRING:P46737
PhosphoSite:P46737 PaxDb:P46737 PRIDE:P46737
Ensembl:ENSMUST00000033544 Ensembl:ENSMUST00000114074
Ensembl:ENSMUST00000118428 GeneID:210766 KEGG:mmu:210766
UCSC:uc009tpy.2 GeneTree:ENSGT00390000000360 InParanoid:Q3UDZ4
OrthoDB:EOG45490C NextBio:373053 Bgee:P46737 CleanEx:MM_BRCC3
Genevestigator:P46737 GermOnline:ENSMUSG00000031201 Uniprot:P46737
Length = 291
Score = 273 (101.2 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 53/86 (61%), Positives = 63/86 (73%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
LTGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GR+
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVL 169
Query: 63 VIAFQSSDGKQN----HISKPIALLP 84
FQS +++ I PI ++P
Sbjct: 170 YTCFQSIQAQKSSEYERIEIPIHIVP 195
Score = 134 (52.2 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 33/111 (29%), Positives = 63/111 (56%)
Query: 194 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 253
+EY R EIP+H++P ++ K+ L S +L ++L +EE+ AY + + +++ + +T
Sbjct: 182 SEYERIEIPIHIVPHITIGKVC--LESAVELPKILCQEEQDAYRR--IHSLTH--LDSVT 235
Query: 254 YIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
IH+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 236 KIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQQEKEELMEE 286
>UNIPROTKB|F1RZ41 [details] [associations]
symbol:BRCC36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070552 "BRISC complex" evidence=IEA] [GO:0070537
"histone H2A K63-linked deubiquitination" evidence=IEA] [GO:0070531
"BRCA1-A complex" evidence=IEA] [GO:0045739 "positive regulation of
DNA repair" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0010165
"response to X-ray" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0030234 GO:GO:0008237 GO:GO:0006302 GO:GO:0010165
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 GO:GO:0000152
GeneTree:ENSGT00390000000360 EMBL:CU914693 EMBL:CU861979
RefSeq:NP_001229952.1 UniGene:Ssc.49952 Ensembl:ENSSSCT00000014006
GeneID:100516948 KEGG:ssc:100516948 CTD:100516948 OMA:IPIHVVP
Uniprot:F1RZ41
Length = 291
Score = 272 (100.8 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 53/86 (61%), Positives = 63/86 (73%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
LTGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GR+
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVL 169
Query: 63 VIAFQSSDGKQN----HISKPIALLP 84
FQS +++ I PI ++P
Sbjct: 170 YTCFQSIQAQKSSEYERIEIPIHVVP 195
Score = 134 (52.2 bits), Expect = 3.5e-36, Sum P(2) = 3.5e-36
Identities = 34/111 (30%), Positives = 63/111 (56%)
Query: 194 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 253
+EY R EIP+HV+P ++ K+ L S +L ++L +EE+ AY + + +++ + +T
Sbjct: 182 SEYERIEIPIHVVPHVAVGKVC--LESAVELPKILCQEEQDAYRR--IHSLTH--LDSVT 235
Query: 254 YIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
IH+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 236 KIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQQEKEELMQE 286
>RGD|1588543 [details] [associations]
symbol:Brcc3 "BRCA1/BRCA2-containing complex, subunit 3"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=ISO] [GO:0000152 "nuclear ubiquitin ligase
complex" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISO;ISS]
[GO:0010165 "response to X-ray" evidence=IEA;ISO] [GO:0010212
"response to ionizing radiation" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA;ISO] [GO:0031572 "G2 DNA
damage checkpoint" evidence=ISO;ISS] [GO:0031593 "polyubiquitin
binding" evidence=ISO;ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISO;ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=ISO] [GO:0070531 "BRCA1-A complex" evidence=ISO;ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO;ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISO;ISS] [GO:0070552 "BRISC complex" evidence=ISO;ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1588543
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 EMBL:CH474092 EMBL:BC166833
IPI:IPI00197234 RefSeq:NP_001120772.1 UniGene:Rn.52727
ProteinModelPortal:B2RYM5 PRIDE:B2RYM5 GeneID:316794
KEGG:rno:316794 NextBio:671241 Genevestigator:B2RYM5 Uniprot:B2RYM5
Length = 291
Score = 271 (100.5 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 52/86 (60%), Positives = 63/86 (73%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
LTGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GR+
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVL 169
Query: 63 VIAFQSSDGKQN----HISKPIALLP 84
FQS +++ I P+ ++P
Sbjct: 170 YTCFQSVQAQKSSDYERIEIPVHVVP 195
Score = 130 (50.8 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 33/111 (29%), Positives = 64/111 (57%)
Query: 194 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 253
++Y R EIP+HV+P ++ K+ L S +L ++L +EE+ AY + + +++ + +T
Sbjct: 182 SDYERIEIPVHVVPHVTIGKVC--LESAVELPKILCQEEQDAYRR--IHSLTH--LDSVT 235
Query: 254 YIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
IH+ S + ++C + P + L+DRL++N+ L L E + L +E
Sbjct: 236 KIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQREKEELMAE 286
>UNIPROTKB|F1P4L2 [details] [associations]
symbol:BRCC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0031572 "G2 DNA damage
checkpoint" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=IEA]
[GO:0070552 "BRISC complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0030234 GO:GO:0008237
GO:GO:0006302 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 GO:GO:0000152 GeneTree:ENSGT00390000000360
OMA:IPIHVVP EMBL:AADN02013225 IPI:IPI00823271
Ensembl:ENSGALT00000040298 ArrayExpress:F1P4L2 Uniprot:F1P4L2
Length = 226
Score = 269 (99.8 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 51/77 (66%), Positives = 58/77 (75%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
+TGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GRI
Sbjct: 24 MTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRIL 83
Query: 63 VIAFQSSDG-KQNHISK 78
FQS K + + K
Sbjct: 84 YTCFQSIQAQKSSEVQK 100
Score = 131 (51.2 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 33/109 (30%), Positives = 62/109 (56%)
Query: 196 YVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYI 255
Y R EIP+HV+P ++ K+ L S +L ++L +EE+ AY + + +++ + +T I
Sbjct: 119 YERIEIPIHVVPHETIGKVC--LESAVELPKILCQEEQDAYRR--IHSLTH--LDSVTKI 172
Query: 256 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
H+ S + ++C + P + L+DRL++N+ R+ L E + L E
Sbjct: 173 HNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRVQELQQEKEQLLEE 221
>UNIPROTKB|P46736 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9606 "Homo sapiens" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0010212 "response
to ionizing radiation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IDA] [GO:0070552 "BRISC complex" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0031572 "G2 DNA
damage checkpoint" evidence=IMP] [GO:0070531 "BRCA1-A complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070537
"histone H2A K63-linked deubiquitination" evidence=IMP;IDA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IMP]
[GO:0008237 "metallopeptidase activity" evidence=IMP] [GO:0045739
"positive regulation of DNA repair" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0000151 "ubiquitin ligase
complex" evidence=IDA] [GO:0010165 "response to X-ray"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IDA]
[GO:0050790 "regulation of catalytic activity" evidence=IDA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0030234
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0006302
GO:GO:0031593 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509 EMBL:X64643
EMBL:S68015 EMBL:AY438030 EMBL:AK298886 EMBL:AK299194 EMBL:AK313544
EMBL:BX293995 EMBL:BX470111 EMBL:BC002999 EMBL:BC006540
IPI:IPI00853631 IPI:IPI00871617 IPI:IPI00936224 IPI:IPI00939471
IPI:IPI01010909 PIR:I38167 RefSeq:NP_001018065.1
RefSeq:NP_001229569.1 RefSeq:NP_077308.1 UniGene:Hs.558537
ProteinModelPortal:P46736 DIP:DIP-48719N IntAct:P46736
MINT:MINT-1475401 STRING:P46736 PhosphoSite:P46736 DMDM:20532383
PaxDb:P46736 PRIDE:P46736 DNASU:79184 Ensembl:ENST00000330045
Ensembl:ENST00000340647 Ensembl:ENST00000369459
Ensembl:ENST00000369462 Ensembl:ENST00000399026
Ensembl:ENST00000411985 GeneID:79184 KEGG:hsa:79184 UCSC:uc004fna.3
UCSC:uc004fnb.3 UCSC:uc011mzy.2 GeneCards:GC0XP154299
HGNC:HGNC:24185 MIM:300617 neXtProt:NX_P46736 Orphanet:280679
PharmGKB:PA134922847 HOVERGEN:HBG002142 GenomeRNAi:79184
NextBio:68176 ArrayExpress:P46736 Bgee:P46736 CleanEx:HS_BRCC3
Genevestigator:P46736 GermOnline:ENSG00000185515 GO:GO:0000152
Uniprot:P46736
Length = 316
Score = 268 (99.4 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 49/72 (68%), Positives = 57/72 (79%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
LTGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GR+
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVL 169
Query: 63 VIAFQSSDGKQN 74
FQS +++
Sbjct: 170 YTCFQSIQAQKS 181
Score = 128 (50.1 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 32/109 (29%), Positives = 61/109 (55%)
Query: 196 YVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYI 255
Y R EIP+H++P ++ K+ L S +L ++L +EE+ AY + + +++ + +T I
Sbjct: 209 YERIEIPIHIVPHVTIGKVC--LESAVELPKILCQEEQDAYRR--IHSLTH--LDSVTKI 262
Query: 256 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
H+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQQEKEELMQE 311
>UNIPROTKB|B0KWU8 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9483 "Callithrix jacchus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0031593
"polyubiquitin binding" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0070531 "BRCA1-A
complex" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=ISS] [GO:0070552 "BRISC complex"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 MEROPS:M67.004 EMBL:DP000587 Uniprot:B0KWU8
Length = 316
Score = 268 (99.4 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 49/72 (68%), Positives = 57/72 (79%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
LTGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GR+
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVL 169
Query: 63 VIAFQSSDGKQN 74
FQS +++
Sbjct: 170 YTCFQSIQAQKS 181
Score = 128 (50.1 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 32/109 (29%), Positives = 61/109 (55%)
Query: 196 YVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYI 255
Y R EIP+H++P ++ K+ L S +L ++L +EE+ AY + + +++ + +T I
Sbjct: 209 YERIEIPIHIVPHVTIGKVC--LESAVELPKILCQEEQDAYRR--IHSLTH--LDSVTKI 262
Query: 256 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
H+ S + ++C + P + L+DRL++N+ L L E + L E
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLRELQQEKEELMQE 311
>UNIPROTKB|A5PJP6 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9913 "Bos taurus" [GO:0070552 "BRISC complex" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0031593 "polyubiquitin binding" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070531 "BRCA1-A complex"
evidence=ISS] [GO:0031572 "G2 DNA damage checkpoint" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0010212 GO:GO:0006302
GO:GO:0031593 GO:GO:0045739 GO:GO:0031572 GO:GO:0004843
GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537
EMBL:BT021737 EMBL:BC142193 IPI:IPI00687250 IPI:IPI00854460
RefSeq:NP_001069258.1 UniGene:Bt.58955 ProteinModelPortal:A5PJP6
STRING:A5PJP6 MEROPS:M67.004 GeneID:519513 KEGG:bta:519513
CTD:79184 eggNOG:NOG322509 HOGENOM:HOG000007866 NextBio:20872891
Uniprot:A5PJP6
Length = 316
Score = 268 (99.4 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 49/72 (68%), Positives = 57/72 (79%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
LTGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GR+
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVL 169
Query: 63 VIAFQSSDGKQN 74
FQS +++
Sbjct: 170 YTCFQSIQAQKS 181
Score = 124 (48.7 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 31/109 (28%), Positives = 61/109 (55%)
Query: 196 YVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYI 255
Y R EIP+H++P ++ K+ L S +L ++L +EE+ AY + + +++ + +T I
Sbjct: 209 YERIEIPIHIVPHVTIGKVC--LESAVELPKILCQEEQDAYRR--IHSLTH--LDSVTKI 262
Query: 256 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
H+ S + ++C + P + L+DRL++N+ + L E + L E
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHVQELQQEKEELLQE 311
>UNIPROTKB|G5E595 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9913 "Bos taurus" [GO:0070552 "BRISC complex" evidence=IEA]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=IEA]
[GO:0070531 "BRCA1-A complex" evidence=IEA] [GO:0045739 "positive
regulation of DNA repair" evidence=IEA] [GO:0031593 "polyubiquitin
binding" evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0000152
"nuclear ubiquitin ligase complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0030234 GO:GO:0008237
GO:GO:0006302 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 GO:GO:0000152 GeneTree:ENSGT00390000000360
OMA:IPIHVVP EMBL:DAAA02070025 EMBL:DAAA02070022 EMBL:DAAA02070023
EMBL:DAAA02070024 Ensembl:ENSBTAT00000010280 Uniprot:G5E595
Length = 316
Score = 268 (99.4 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 49/72 (68%), Positives = 57/72 (79%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
LTGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GR+
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVL 169
Query: 63 VIAFQSSDGKQN 74
FQS +++
Sbjct: 170 YTCFQSIQAQKS 181
Score = 124 (48.7 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 31/109 (28%), Positives = 61/109 (55%)
Query: 196 YVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLTYI 255
Y R EIP+H++P ++ K+ L S +L ++L +EE+ AY + + +++ + +T I
Sbjct: 209 YERIEIPIHIVPHVTIGKVC--LESAVELPKILCQEEQDAYRR--IHSLTH--LDSVTKI 262
Query: 256 HHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
H+ S + ++C + P + L+DRL++N+ + L E + L E
Sbjct: 263 HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHVQELQQEKEELLQE 311
>MGI|MGI:3647286 [details] [associations]
symbol:Gm5136 "predicted gene 5136" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:3647286 GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
GO:GO:0010212 GO:GO:0006302 GO:GO:0031593 GO:GO:0045739
GO:GO:0031572 GO:GO:0004843 GO:GO:0004221 GO:GO:0070531
GO:GO:0070552 EMBL:BC120506 EMBL:BC120508 EMBL:AK134982
EMBL:BN000130 IPI:IPI00279112 RefSeq:NP_988991.1 UniGene:Mm.452758
ProteinModelPortal:Q7M757 MEROPS:M67.007 PRIDE:Q7M757 GeneID:368203
KEGG:mmu:368203 UCSC:uc007gzj.2 KO:K11864 NextBio:400944
Genevestigator:Q7M757 GO:GO:0070537 Uniprot:Q7M757
Length = 291
Score = 254 (94.5 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 48/85 (56%), Positives = 60/85 (70%)
Query: 5 TGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDA-NKVGRIQV 63
TGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D F+GLIF+CF ED K+GR+
Sbjct: 111 TGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQSFVGLIFACFIEDKPTKIGRVLY 170
Query: 64 IAFQSSDGKQN----HISKPIALLP 84
FQS ++ + PI ++P
Sbjct: 171 TCFQSVQASKSSEYERLEIPIHIVP 195
Score = 132 (51.5 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 33/111 (29%), Positives = 61/111 (54%)
Query: 194 AEYVRKEIPLHVLPTSSLLKLDSPLTSFTDLQRVLYEEERAAYNQAIMQNMSDGKVHPLT 253
+EY R EIP+H++P +++ + L S +L +L +EE+ AY + + ++ + +T
Sbjct: 182 SEYERLEIPIHIVPRTTIGTVC--LRSAIELPGILCQEEQEAYRR--IHGLTH--LDSVT 235
Query: 254 YIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLTDEAKSLESE 304
IH+ S + +C + P + L+DRL++N+ RL L E + L E
Sbjct: 236 KIHNGSVFTKHLCSQMSAVCGPLLQWLEDRLEQNQQRLQELEQEKEDLMEE 286
>UNIPROTKB|Q5R9L6 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 MEROPS:M67.004
CTD:79184 HOGENOM:HOG000007866 EMBL:CR859371 RefSeq:NP_001125907.1
UniGene:Pab.3487 ProteinModelPortal:Q5R9L6 PRIDE:Q5R9L6
GeneID:100172840 KEGG:pon:100172840 Uniprot:Q5R9L6
Length = 247
Score = 268 (99.4 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 49/72 (68%), Positives = 57/72 (79%)
Query: 4 LTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDTGFIGLIFSCFSEDAN-KVGRIQ 62
LTGR RV+GWYHSHPHITV PSHVDVRTQAMYQ++D GF+GLIFSCF ED N K GR+
Sbjct: 110 LTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVL 169
Query: 63 VIAFQSSDGKQN 74
FQS +++
Sbjct: 170 YTCFQSIQAQKS 181
Score = 81 (33.6 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 238 QAIMQNMSDGKVH--PLTYIHHTSTYQASMCKLIEYCLSPAISALQDRLKENEIRLAMLT 295
Q+I S H +T IH+ S + ++C + P + L+DRL++N+ L L
Sbjct: 174 QSIQAQKSSDLTHLDSVTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQQHLQELQ 233
Query: 296 DEAKSLESE 304
E + L E
Sbjct: 234 QEKEELMQE 242
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 350 318 0.00083 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 609 (65 KB)
Total size of DFA: 204 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.56u 0.09s 25.65t Elapsed: 00:00:01
Total cpu time: 25.57u 0.09s 25.66t Elapsed: 00:00:01
Start: Fri May 10 06:36:03 2013 End: Fri May 10 06:36:04 2013