Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>018829
MGGEKTTSRFFTPEGEEIISPVDDFDIPLLSMNSGDDEGSRDSWDSLVDQRRRDAVFREV
LQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKS
SLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDAS
DNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGL
AVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGE
LLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCKSCARNKV

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018829
        (350 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2123236 - symbol:AT4G13030 species:3702 "Arabi...   743  1.4e-73   1
ZFIN|ZDB-GENE-030131-9145 - symbol:si:dkey-79f11.5 "si:dk...   128  1.5e-05   1


>TAIR|locus:2123236 [details] [associations]
            symbol:AT4G13030 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002687 GO:GO:0016787
            IPI:IPI00536217 RefSeq:NP_193039.3 UniGene:At.3517
            ProteinModelPortal:F4JS74 SMR:F4JS74 EnsemblPlants:AT4G13030.1
            GeneID:826917 KEGG:ath:AT4G13030 OMA:MALASIW PhylomeDB:F4JS74
            Uniprot:F4JS74
        Length = 481

 Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
 Identities = 157/296 (53%), Positives = 208/296 (70%)

Query:    47 LVDQRRRDAVFREVLQSYDQL-RTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPK 105
             + D RRR+  ++E+LQS+D L RT    L  A+N+ILSYTPG+W +    + LSDY++PK
Sbjct:    50 VTDLRRREKAYQEILQSHDLLLRTSKRKLRQARNEILSYTPGSWSD----VKLSDYNIPK 105

Query:   106 TTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG-S 164
             TTS++L+GPKG+GKSSLVN+I++V E+D F  +RAQ ++ +    GTYF+QEY I RG S
Sbjct:   106 TTSIMLVGPKGAGKSSLVNKITRVIEDDAFLLDRAQESFGTPSKGGTYFVQEYMISRGGS 165

Query:   165 NSFSLYDTRSLSD-DASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCE 223
              SF LYDTR LS   +SDN +MI+ W+  GV HGE VI  SDSS L++R+  +    G E
Sbjct:   166 ASFCLYDTRGLSRISSSDNTSMIEQWMTRGVLHGEPVIWASDSSDLKDRL-IRDGGTGYE 224

Query:   224 PSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHG 283
                 RKVN +IFVV+ + +LKSME     E  Y  ++ T FN P L F+DDKP VV+THG
Sbjct:   225 R---RKVNSIIFVVNAVEILKSME----CETSYASMITTAFNSPILLFKDDKPAVVMTHG 277

Query:   284 DLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRN 339
             D+LS  +RAR+R +LGELLGIPP KQIFDIPES D    + I ++L Y L+HAD+N
Sbjct:   278 DMLSREERARVRVFLGELLGIPPHKQIFDIPESRDTATAITICNLLCYSLQHADKN 333


>ZFIN|ZDB-GENE-030131-9145 [details] [associations]
            symbol:si:dkey-79f11.5 "si:dkey-79f11.5"
            species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
            InterPro:IPR006073 Pfam:PF01926 ZFIN:ZDB-GENE-030131-9145
            GO:GO:0005525 InterPro:IPR024644 PANTHER:PTHR14241
            GeneTree:ENSGT00390000017981 EMBL:CR855320 IPI:IPI00902277
            Ensembl:ENSDART00000133098 Uniprot:F1R9H4
        Length = 313

 Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 50/162 (30%), Positives = 82/162 (50%)

Query:    89 WIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSV 148
             W+EN    TLSD +V K   +L++GP G+GKSS +N I+ VF+  +  S +A V  NS+ 
Sbjct:    57 WLEN---FTLSDPNV-KDIKILVVGPSGAGKSSFINSINSVFQ--RRISSKALV--NSAG 108

Query:   149 GDGTYF---LQEYTIPRGSNS--FSLYDTRSLSDD---ASDNINMIKLWIMEGVRHGELV 200
             GD   F   L+  TI  G  S  F  +D   L  +    S   ++IK  +   V+ G   
Sbjct:   109 GDNHSFTEKLKRLTIKNGKTSLPFVFFDIMGLEAEEFHGSKTEDIIKA-VFGHVKDG--- 164

Query:   201 IRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAV 242
              + ++  S+  + +   H    +PS+  +   V++++DG  V
Sbjct:   165 YKFNEEQSIDYKDQ---HYTS-DPSLSDQCFCVVYIIDGKIV 202


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      350       350    0.0010  116 3  11 22  0.41    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  229 KB (2126 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.92u 0.09s 30.01t   Elapsed:  00:00:02
  Total cpu time:  29.92u 0.09s 30.01t   Elapsed:  00:00:02
  Start:  Fri May 10 06:37:56 2013   End:  Fri May 10 06:37:58 2013

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