BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018829
(350 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224069876|ref|XP_002303066.1| predicted protein [Populus trichocarpa]
gi|222844792|gb|EEE82339.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/316 (67%), Positives = 246/316 (77%), Gaps = 3/316 (0%)
Query: 38 EGSRDSWDSL---VDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVG 94
EGSR L +Q++ +REVLQSYDQL+ R SL + K+KILSYTPG W+ENV
Sbjct: 84 EGSRIPSSFLELQANQKKASTAYREVLQSYDQLKDRSKSLEEGKSKILSYTPGGWMENVI 143
Query: 95 GMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYF 154
GM LSD+DVP TT LL+IGPKGSGKSSL+NRISKVFE+DKFASERAQV+YNSS DGTYF
Sbjct: 144 GMKLSDFDVPNTTVLLVIGPKGSGKSSLINRISKVFEDDKFASERAQVSYNSSAADGTYF 203
Query: 155 LQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMR 214
LQEY IPR S+SF LYDTR LS D+ D+ NM+K WI +GV H EL+IR SD+S LRN+M+
Sbjct: 204 LQEYMIPRSSSSFCLYDTRGLSYDSYDSANMLKNWITKGVHHRELIIRPSDNSHLRNQMK 263
Query: 215 CKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDD 274
CKA GC+ R V FVIFVVDGLAVLKSM+ D K+Y Q++A TF+CPY+SF DD
Sbjct: 264 CKARGNGCQSKETRMVTFVIFVVDGLAVLKSMDNLVDEGKKYTQMIAKTFDCPYISFNDD 323
Query: 275 KPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLE 334
KPVVVVTHGDLLSL DRAR+R +LGELLGIPPAKQIFDIPES DP EL IV+ML Y LE
Sbjct: 324 KPVVVVTHGDLLSLNDRARVRVHLGELLGIPPAKQIFDIPESHDPVTELTIVNMLHYSLE 383
Query: 335 HADRNLSCKSCARNKV 350
HAD+NL K KV
Sbjct: 384 HADKNLPHKRQIAKKV 399
>gi|255580517|ref|XP_002531083.1| ATP binding protein, putative [Ricinus communis]
gi|223529329|gb|EEF31297.1| ATP binding protein, putative [Ricinus communis]
Length = 419
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/293 (67%), Positives = 233/293 (79%)
Query: 48 VDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTT 107
+QR++ F+E+LQSYDQLR+R SL +AK+KILSYTPG W E VGGM LSDY+VPKTT
Sbjct: 69 ANQRKKWKAFKELLQSYDQLRSRAESLDEAKSKILSYTPGGWKEKVGGMKLSDYNVPKTT 128
Query: 108 SLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSF 167
+LLL+GP+GSGKSSLVNRISKVF++DKFA ERAQV+YN S G+GTYFLQEY IP S SF
Sbjct: 129 TLLLVGPRGSGKSSLVNRISKVFDDDKFAPERAQVSYNPSAGEGTYFLQEYMIPGCSTSF 188
Query: 168 SLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 227
LYDTR D++ DNI M+K W+ GV HGEL +R+ D SSLR RM+CK G +
Sbjct: 189 CLYDTRGFFDNSYDNIEMLKYWMTRGVCHGELTVRKCDDSSLRTRMKCKVRYNGSQSKKN 248
Query: 228 RKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLS 287
R VNFVIFVV+GLAVLKSM + + QY ++A+ FNCPY SF+DDKPVVVVTHGDLLS
Sbjct: 249 RTVNFVIFVVNGLAVLKSMGSEVEKGNQYTDMIASAFNCPYASFKDDKPVVVVTHGDLLS 308
Query: 288 LTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 340
L+DR RIR +LGELLGIPPAKQIFDIPES DP EL I+DMLRY LEHAD NL
Sbjct: 309 LSDRTRIRVHLGELLGIPPAKQIFDIPESCDPVTELTIIDMLRYSLEHADNNL 361
>gi|225470035|ref|XP_002265228.1| PREDICTED: uncharacterized protein LOC100246086 [Vitis vinifera]
gi|297741779|emb|CBI33051.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/295 (68%), Positives = 235/295 (79%), Gaps = 1/295 (0%)
Query: 50 QRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSL 109
QRRR V+ ++LQSYD +R R +L AK++ILSYTPGAWIE GGM SDY+VP+TTSL
Sbjct: 28 QRRRSLVYSQILQSYDDVRIRTNALEKAKSRILSYTPGAWIEMSGGMKFSDYNVPETTSL 87
Query: 110 LLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSL 169
+L+GPKGSGKSSL+N+IS+VFE+DKFA ERAQV+YN SVGDGTYFLQEY IPRGS SF L
Sbjct: 88 ILVGPKGSGKSSLINKISRVFEDDKFAPERAQVSYNLSVGDGTYFLQEYMIPRGSTSFCL 147
Query: 170 YDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRK 229
YDTR LSD +SDN+ M+K WI +GVRHGEL IR SDS S+R RM+CKA + G S R
Sbjct: 148 YDTRGLSDVSSDNMQMLKHWITKGVRHGELAIRNSDSPSIRARMKCKARQSGYNSSKTRL 207
Query: 230 VNFVIFVVDGLAVLKSMEGDSDVEKQ-YNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSL 288
VNFVIFVV+GL+VLKS++ D Q Y Q +A F CPYLSFRDD PVVVVTHGDLLSL
Sbjct: 208 VNFVIFVVNGLSVLKSIDSCDDGASQFYIQTIAEMFCCPYLSFRDDMPVVVVTHGDLLSL 267
Query: 289 TDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCK 343
+DRAR+R +LGE LGI P KQIFDIPES EL I+DMLRY LEHADRNL CK
Sbjct: 268 SDRARVRVHLGEHLGISPGKQIFDIPESCGKATELTIIDMLRYSLEHADRNLPCK 322
>gi|449464106|ref|XP_004149770.1| PREDICTED: uncharacterized protein LOC101208586 [Cucumis sativus]
gi|449520910|ref|XP_004167475.1| PREDICTED: uncharacterized protein LOC101225331 [Cucumis sativus]
Length = 436
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/308 (63%), Positives = 239/308 (77%), Gaps = 1/308 (0%)
Query: 36 DDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGG 95
+ E S + D + + RR+ V RE+++SYDQLR R +L AK KILSY+PGAWIE VGG
Sbjct: 67 ESEYSSAALDVDICRMRRNRVHREIIESYDQLRIRSENLNQAKQKILSYSPGAWIEQVGG 126
Query: 96 MTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFL 155
M LSDYD+P+TTSL+LIGPKGSGKSSL+NRISKVFE D FA ERAQV+ NSS DGT+FL
Sbjct: 127 MKLSDYDIPQTTSLILIGPKGSGKSSLINRISKVFEEDHFAPERAQVSCNSSGEDGTFFL 186
Query: 156 QEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRC 215
EY I R S SF LYDTR LS+D SDNI M+K W+ +GV HG+LV R+SD+SSL NRMRC
Sbjct: 187 HEYMILRKSKSFCLYDTRGLSNDPSDNIEMLKQWMSKGVHHGKLVTRKSDASSLINRMRC 246
Query: 216 KAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDK 275
KA + V+R +NFVIFVVDGL+VLKS++GD D +K Y++++ T FNCPYLS+ DDK
Sbjct: 247 KARQSFPRSRVVRIINFVIFVVDGLSVLKSIDGD-DKQKDYDRVITTAFNCPYLSYGDDK 305
Query: 276 PVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEH 335
PVVV+THGDLLS + R+R +LG LLGIP KQIFDIP+ DP EL I+DML YCLEH
Sbjct: 306 PVVVLTHGDLLSFAENVRVRGHLGNLLGIPSTKQIFDIPDRYDPVTELTIIDMLHYCLEH 365
Query: 336 ADRNLSCK 343
AD+NL K
Sbjct: 366 ADKNLPPK 373
>gi|356567802|ref|XP_003552104.1| PREDICTED: uncharacterized protein LOC100783278 [Glycine max]
Length = 429
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/305 (59%), Positives = 226/305 (74%), Gaps = 2/305 (0%)
Query: 48 VDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTT 107
V++RRR ++E+LQ D+L+ L K KIL Y PGAWIE GG+ +SDYDVPKTT
Sbjct: 70 VNERRRVINYQEILQCCDELKIHSKDLKREKQKILRYKPGAWIEKAGGLKISDYDVPKTT 129
Query: 108 SLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSF 167
LLL+GP+GSGKSSL+NRISKV E+D+FA RAQ +YNS +GDGT FLQEY IPR SNS
Sbjct: 130 CLLLVGPRGSGKSSLINRISKVVEDDRFAPARAQESYNSLLGDGTSFLQEYMIPRYSNSI 189
Query: 168 SLYDTRSLSDDAS--DNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPS 225
LYDTRSLSD++ +NI M+K W+ +GV HGELV+R++D+ LR ++ KAHK G S
Sbjct: 190 CLYDTRSLSDNSEKDENIRMLKSWMTKGVHHGELVVRKTDNQRLRKSLKGKAHKKGYLSS 249
Query: 226 VIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDL 285
RKVNFVI+VV+GL VLK+ME D +E Q Q + +TFNCP+LSF+DDKPV+V THGDL
Sbjct: 250 KTRKVNFVIYVVNGLLVLKAMENDGALETQCVQSIVSTFNCPFLSFKDDKPVLVFTHGDL 309
Query: 286 LSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCKSC 345
LS ++RA +R +LG LLGIPP KQIFDIP+ P E I+ MLRY L HADR+ +S
Sbjct: 310 LSFSERALVREHLGTLLGIPPTKQIFDIPDCDCPATESAIIGMLRYSLAHADRHFPQRSK 369
Query: 346 ARNKV 350
+KV
Sbjct: 370 VMDKV 374
>gi|357505167|ref|XP_003622872.1| hypothetical protein MTR_7g055730 [Medicago truncatula]
gi|355497887|gb|AES79090.1| hypothetical protein MTR_7g055730 [Medicago truncatula]
Length = 487
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 183/307 (59%), Positives = 231/307 (75%), Gaps = 3/307 (0%)
Query: 47 LVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKT 106
+V +R+R ++++E+LQSYD+L+ SL AK KIL Y PG WIE G+ L DYDVP+T
Sbjct: 65 VVGERKRLSIYQEILQSYDELKIDSISLKQAKEKILRYRPGTWIEKARGLKLRDYDVPET 124
Query: 107 TSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNS 166
TSL+L+GP GSGKSSL+NRISKVF++DKFA RAQV+YNS GDGTYFL+E+ IPR SNS
Sbjct: 125 TSLILVGPSGSGKSSLINRISKVFDDDKFAPTRAQVSYNSLRGDGTYFLREHMIPRDSNS 184
Query: 167 FSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSV 226
LYDTRSLS+ + +N M+K W+ EGV HGELVIR D+ +L ++CK +K G S
Sbjct: 185 ICLYDTRSLSNKSHENNEMLKNWMTEGVHHGELVIRSKDNQTLTESLKCKGNKKGFFSSK 244
Query: 227 IRKVNFVIFVVDGLAVLKSME-GDSDVEKQY-NQIVAT-TFNCPYLSFRDDKPVVVVTHG 283
RKVNFVI+V++GL+VL ME D + +Y +IV+T FN P+LSF+DDKPV+V+THG
Sbjct: 245 SRKVNFVIYVLNGLSVLNMMENADGAFKARYIEEIVSTFNFNNPFLSFKDDKPVLVLTHG 304
Query: 284 DLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCK 343
DLLSL+DRAR+R YLGE+LGIPP KQIFDIPE D E I+ MLRY LEHAD N+ K
Sbjct: 305 DLLSLSDRARVRVYLGEVLGIPPTKQIFDIPECDDLVTESAIIGMLRYTLEHADNNIPQK 364
Query: 344 SCARNKV 350
+ NKV
Sbjct: 365 TNVMNKV 371
>gi|357505165|ref|XP_003622871.1| hypothetical protein MTR_7g055720 [Medicago truncatula]
gi|355497886|gb|AES79089.1| hypothetical protein MTR_7g055720 [Medicago truncatula]
Length = 475
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 181/307 (58%), Positives = 224/307 (72%), Gaps = 1/307 (0%)
Query: 45 DSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVP 104
DS++ +R+R +++E+LQSYD L+ +L +AK KILSY PG W E G+ L DYDVP
Sbjct: 69 DSVIGERKRLGIYQEILQSYDALKIDSKNLKEAKEKILSYRPGTWTEKAKGLKLCDYDVP 128
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGS 164
+TT LLL+GP GSGKSSL+NRISKVF+ DKFA RAQV+YNS G+GT FL+EY IPR S
Sbjct: 129 ETTCLLLVGPSGSGKSSLINRISKVFDEDKFAPARAQVSYNSIRGNGTCFLREYMIPRDS 188
Query: 165 NSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEP 224
NS LYDTRSLSDD+ +N M+K W+ +GVRHGELV R D L ++ K K G
Sbjct: 189 NSICLYDTRSLSDDSHENNKMLKNWMTKGVRHGELVARGMDDKRLSKNLKLKGDKKGFFS 248
Query: 225 SVIRKVNFVIFVVDGLAVLKSME-GDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHG 283
S RKVN+VI V++GL+VL +E +E+ Y Q + +TFNCP+LSF+DDKPV+V+THG
Sbjct: 249 SKSRKVNYVICVLNGLSVLNVIENAGGALEEWYIQQIVSTFNCPFLSFKDDKPVLVLTHG 308
Query: 284 DLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCK 343
DLLSL+DRAR+R YLGELLGIPP KQIFDIP+ D E IV MLRY LEHAD N K
Sbjct: 309 DLLSLSDRARVRAYLGELLGIPPTKQIFDIPDCDDLVTESAIVGMLRYTLEHADGNFPQK 368
Query: 344 SCARNKV 350
S NK+
Sbjct: 369 SNVMNKI 375
>gi|388500938|gb|AFK38535.1| unknown [Medicago truncatula]
Length = 474
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 181/307 (58%), Positives = 224/307 (72%), Gaps = 1/307 (0%)
Query: 45 DSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVP 104
DS++ +R+R +++E+LQSYD L+ +L +AK KILSY PG W E G+ L DYDVP
Sbjct: 69 DSVIGERKRLGIYQEILQSYDALKIDSKNLKEAKEKILSYRPGTWTEKAKGLKLCDYDVP 128
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGS 164
+TT LLL+GP GSGKSSL+NRISKVF+ DKFA RAQV+YNS G+GT FL+EY IPR S
Sbjct: 129 ETTCLLLVGPSGSGKSSLINRISKVFDEDKFAPARAQVSYNSIRGNGTCFLREYMIPRDS 188
Query: 165 NSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEP 224
NS LYDTRSLSDD+ +N M+K W+ +GVRHGELV R D L ++ K K G
Sbjct: 189 NSICLYDTRSLSDDSHENNKMLKNWMTKGVRHGELVARGMDDKRLSKNLKLKGDKKGFFS 248
Query: 225 SVIRKVNFVIFVVDGLAVLKSME-GDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHG 283
S RKVN+VI V++GL+VL +E +E+ Y Q + +TFNCP+LSF+DDKPV+V+THG
Sbjct: 249 SKSRKVNYVICVLNGLSVLNVIENAGGALEEWYIQQIVSTFNCPFLSFKDDKPVLVLTHG 308
Query: 284 DLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCK 343
DLLSL+DRAR+R YLGELLGIPP KQIFDIP+ D E IV MLRY LEHAD N K
Sbjct: 309 DLLSLSDRARVRAYLGELLGIPPTKQIFDIPDCDDLVTESAIVGMLRYTLEHADGNFPQK 368
Query: 344 SCARNKV 350
S NK+
Sbjct: 369 SNVMNKI 375
>gi|297790788|ref|XP_002863279.1| hypothetical protein ARALYDRAFT_497092 [Arabidopsis lyrata subsp.
lyrata]
gi|297309113|gb|EFH39538.1| hypothetical protein ARALYDRAFT_497092 [Arabidopsis lyrata subsp.
lyrata]
Length = 479
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 165/299 (55%), Positives = 214/299 (71%), Gaps = 15/299 (5%)
Query: 45 DSLVDQRRRDAVFREVLQSYD-QLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDV 103
+ + D RRR+ ++E+LQSYD LR+ L A+N+IL YTPG+W + + LSDYDV
Sbjct: 47 NHVTDLRRREKSYQEILQSYDVLLRSSKRKLRQARNEILRYTPGSWSD----VKLSDYDV 102
Query: 104 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG 163
PKTTS++L+GPKG+GKSSLVN+IS+V E+D+F RAQ ++ + GT+F+QEY IPRG
Sbjct: 103 PKTTSIMLVGPKGAGKSSLVNKISRVIEDDEFFPARAQESFGTQSKGGTFFVQEYMIPRG 162
Query: 164 -SNSFSLYDTRSLSD-DASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG 221
S SF LYDTR LS +SDN MI+ W+ +GV HGE VI SDSS L++R+ + G
Sbjct: 163 GSASFCLYDTRGLSHISSSDNTRMIEQWMTKGVHHGEPVIWTSDSSDLKDRL-IRDGGTG 221
Query: 222 CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVT 281
E RKVN VIFV++ + +LKSME E Y +++T FNCP LSF+DDKP VV+T
Sbjct: 222 YER---RKVNSVIFVINAVEILKSME----CETSYAHMISTAFNCPLLSFKDDKPAVVMT 274
Query: 282 HGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 340
HGD+LSL DRAR+R +LGELLGIPPAKQIFDIPES D L I ++L Y L+HAD+N
Sbjct: 275 HGDMLSLEDRARVRVFLGELLGIPPAKQIFDIPESRDIATALTICNLLCYSLDHADKNF 333
>gi|42566738|ref|NP_193039.3| P-loop containing nucleoside triphosphate hydrolase
domain-containing protein [Arabidopsis thaliana]
gi|332657819|gb|AEE83219.1| P-loop containing nucleoside triphosphate hydrolase
domain-containing protein [Arabidopsis thaliana]
Length = 481
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/299 (52%), Positives = 209/299 (69%), Gaps = 15/299 (5%)
Query: 45 DSLVDQRRRDAVFREVLQSYDQL-RTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDV 103
+ + D RRR+ ++E+LQS+D L RT L A+N+ILSYTPG+W + + LSDY++
Sbjct: 48 NHVTDLRRREKAYQEILQSHDLLLRTSKRKLRQARNEILSYTPGSWSD----VKLSDYNI 103
Query: 104 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG 163
PKTTS++L+GPKG+GKSSLVN+I++V E+D F +RAQ ++ + GTYF+QEY I RG
Sbjct: 104 PKTTSIMLVGPKGAGKSSLVNKITRVIEDDAFLLDRAQESFGTPSKGGTYFVQEYMISRG 163
Query: 164 -SNSFSLYDTRSLSD-DASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG 221
S SF LYDTR LS +SDN +MI+ W+ GV HGE VI SDSS L++R+ + G
Sbjct: 164 GSASFCLYDTRGLSRISSSDNTSMIEQWMTRGVLHGEPVIWASDSSDLKDRL-IRDGGTG 222
Query: 222 CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVT 281
E RKVN +IFVV+ + +LKSME E Y ++ T FN P L F+DDKP VV+T
Sbjct: 223 YER---RKVNSIIFVVNAVEILKSME----CETSYASMITTAFNSPILLFKDDKPAVVMT 275
Query: 282 HGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 340
HGD+LS +RAR+R +LGELLGIPP KQIFDIPES D + I ++L Y L+HAD+N
Sbjct: 276 HGDMLSREERARVRVFLGELLGIPPHKQIFDIPESRDTATAITICNLLCYSLQHADKNF 334
>gi|42570140|ref|NP_849371.2| P-loop containing nucleoside triphosphate hydrolase
domain-containing protein [Arabidopsis thaliana]
gi|332657820|gb|AEE83220.1| P-loop containing nucleoside triphosphate hydrolase
domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/299 (52%), Positives = 209/299 (69%), Gaps = 15/299 (5%)
Query: 45 DSLVDQRRRDAVFREVLQSYDQL-RTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDV 103
+ + D RRR+ ++E+LQS+D L RT L A+N+ILSYTPG+W + + LSDY++
Sbjct: 46 NHVTDLRRREKAYQEILQSHDLLLRTSKRKLRQARNEILSYTPGSWSD----VKLSDYNI 101
Query: 104 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG 163
PKTTS++L+GPKG+GKSSLVN+I++V E+D F +RAQ ++ + GTYF+QEY I RG
Sbjct: 102 PKTTSIMLVGPKGAGKSSLVNKITRVIEDDAFLLDRAQESFGTPSKGGTYFVQEYMISRG 161
Query: 164 -SNSFSLYDTRSLSD-DASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG 221
S SF LYDTR LS +SDN +MI+ W+ GV HGE VI SDSS L++R+ + G
Sbjct: 162 GSASFCLYDTRGLSRISSSDNTSMIEQWMTRGVLHGEPVIWASDSSDLKDRL-IRDGGTG 220
Query: 222 CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVT 281
E RKVN +IFVV+ + +LKSME E Y ++ T FN P L F+DDKP VV+T
Sbjct: 221 YER---RKVNSIIFVVNAVEILKSME----CETSYASMITTAFNSPILLFKDDKPAVVMT 273
Query: 282 HGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 340
HGD+LS +RAR+R +LGELLGIPP KQIFDIPES D + I ++L Y L+HAD+N
Sbjct: 274 HGDMLSREERARVRVFLGELLGIPPHKQIFDIPESRDTATAITICNLLCYSLQHADKNF 332
>gi|226502704|ref|NP_001150449.1| ATP binding protein [Zea mays]
gi|195639348|gb|ACG39142.1| ATP binding protein [Zea mays]
Length = 375
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 182/281 (64%), Gaps = 7/281 (2%)
Query: 65 DQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVN 124
D +R L +AK I Y PG WIE VGG + +P+ T+LLL+GP+GSGKS+LVN
Sbjct: 50 DSIRYFNRQLREAKEFIRRYKPGDWIEGVGGAKAGHFVLPEVTTLLLVGPRGSGKSTLVN 109
Query: 125 RISKVF--ENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDN 182
RI++VF ++D FA +RAQV+ NS +GT FL+EY IPR S++ +YDTR S+D N
Sbjct: 110 RITRVFDKDDDPFAPDRAQVSCNSK-SNGTMFLREYPIPRNSSAVCIYDTRGWSNDLEKN 168
Query: 183 INMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAV 242
M+ W+ +G+ HGE + D + M+ + IRKVNFVIFVVDG+AV
Sbjct: 169 FKMLHQWMTKGISHGETTMWDDDEGNKIGNMKPLGRQYSFLRYKIRKVNFVIFVVDGVAV 228
Query: 243 LKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELL 302
L+SM+ D K Y +I+ TF P+LS DDKPVVVVTHGD LS+ R ++ L ELL
Sbjct: 229 LESMD---DSNKGYTEILRQTFMYPFLSIGDDKPVVVVTHGDRLSIQQRVHVQAELAELL 285
Query: 303 GIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNLSCK 343
I PA+QI+DIP S D + ++ ++DML YC+ HA++NL K
Sbjct: 286 DI-PAQQIYDIPGSDDDQTDMAVLDMLHYCVRHAEQNLPVK 325
>gi|413941832|gb|AFW74481.1| ATP binding protein [Zea mays]
Length = 419
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/273 (47%), Positives = 179/273 (65%), Gaps = 7/273 (2%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF-- 130
L +AK I Y PG WIE VG + +P+ T+LLL+GP+GSGKS+LVNRI++VF
Sbjct: 102 QLREAKEFIRRYKPGDWIEGVGSAKAGHFVLPEVTTLLLVGPRGSGKSTLVNRITRVFDK 161
Query: 131 ENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWI 190
++D FA +RAQV+ NS +GT FL+EY IPR S++ +YDTR S+D N M+ W+
Sbjct: 162 DDDPFAPDRAQVSCNSK-SNGTMFLREYPIPRNSSAVCIYDTRGWSNDLEKNFKMLHQWM 220
Query: 191 MEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 250
+G+ HGE + D + M+ + IRKVNFV+FVVDG+AVL+SM+
Sbjct: 221 TKGISHGETTMWDDDEGNKIGNMKPLGRQYSFLRYKIRKVNFVLFVVDGVAVLESMD--- 277
Query: 251 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQI 310
D K Y +I+ TF P+LS DDKPVVVVTHGD LS+ R ++ L ELL I PA+QI
Sbjct: 278 DSNKGYTEILRQTFMYPFLSIGDDKPVVVVTHGDRLSIQQRVHVQAELAELLDI-PAQQI 336
Query: 311 FDIPESSDPENELIIVDMLRYCLEHADRNLSCK 343
+DIP S D + +++++DML YC+ HA++NL K
Sbjct: 337 YDIPGSDDDQTDMVVLDMLHYCVRHAEQNLPVK 369
>gi|414869394|tpg|DAA47951.1| TPA: hypothetical protein ZEAMMB73_985826 [Zea mays]
Length = 341
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 124/262 (47%), Positives = 171/262 (65%), Gaps = 7/262 (2%)
Query: 84 YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF--ENDKFASERAQ 141
Y PG WIE VGG + +P+ T+LLL+GP+GS KS+LVNRI++VF ++D FA +RAQ
Sbjct: 35 YKPGDWIEGVGGAKAGHFVLPEVTTLLLVGPRGSVKSTLVNRITRVFDKDDDPFAPDRAQ 94
Query: 142 VTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVI 201
V+ NS +GT FL+EY IPR S++ +YDTR S+D N M+ W+ +G+ HGE +
Sbjct: 95 VSCNSQ-SNGTMFLREYPIPRNSSAVCIYDTRGWSNDLEKNFKMLHQWMTKGISHGETTM 153
Query: 202 RRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVA 261
D + M+ + I KVNFVIFVVDG+AVL+SM+ D K Y +I+
Sbjct: 154 WDDDEGNKIGNMKPLGRQYSFLRYKIWKVNFVIFVVDGVAVLESMD---DSNKGYTEILR 210
Query: 262 TTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPEN 321
TF P+LS DDKPVVVVTHGD LS+ R ++ L ELL I P +QI+DI S+D +
Sbjct: 211 QTFMYPFLSIGDDKPVVVVTHGDRLSIQQRVHVQAELAELLDI-PVQQIYDILGSNDDQT 269
Query: 322 ELIIVDMLRYCLEHADRNLSCK 343
++ ++DML YC+ HA++NL K
Sbjct: 270 DMAVLDMLHYCVRHAEQNLHVK 291
>gi|33589692|gb|AAQ22612.1| At4g13030 [Arabidopsis thaliana]
Length = 372
Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 162/233 (69%), Gaps = 10/233 (4%)
Query: 110 LLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG-SNSFS 168
+L+GPKG+GKSSLVN+I++V E+D F +RAQ ++ + GTYF+QEY I RG S SF
Sbjct: 1 MLVGPKGAGKSSLVNKITRVIEDDAFLLDRAQESFGTPSKGGTYFVQEYMISRGGSASFC 60
Query: 169 LYDTRSLSD-DASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 227
LYDTR LS +SDN +MI+ W+ GV HGE VI SDSS L++R+ + G E
Sbjct: 61 LYDTRGLSRISSSDNTSMIEQWMTRGVLHGEPVIWASDSSDLKDRL-IRDGGTGYER--- 116
Query: 228 RKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLS 287
RKVN +IFVV+ + +LKSME E Y ++ T FN P L F+DDKP VV+THGD+LS
Sbjct: 117 RKVNSIIFVVNAVEILKSME----CETSYASMITTAFNSPILLFKDDKPAVVMTHGDMLS 172
Query: 288 LTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 340
+RAR+R +LGELLGIPP KQIFDIPES D + I ++L Y L+HAD+N
Sbjct: 173 REERARVRVFLGELLGIPPHKQIFDIPESRDTATAITICNLLCYSLQHADKNF 225
>gi|242078087|ref|XP_002443812.1| hypothetical protein SORBIDRAFT_07g002570 [Sorghum bicolor]
gi|241940162|gb|EES13307.1| hypothetical protein SORBIDRAFT_07g002570 [Sorghum bicolor]
Length = 394
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 122/273 (44%), Positives = 177/273 (64%), Gaps = 7/273 (2%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF-- 130
L + K I Y PG W+E VGG + +P+ T+LLL+GP+GSGKS+LVNRI++VF
Sbjct: 82 QLREVKELIRRYKPGDWVEGVGGAKAGHFLLPEITTLLLVGPRGSGKSTLVNRITRVFDK 141
Query: 131 ENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWI 190
++D FA +RAQV+ NS+ + T FL EY IPR S++ +YDT S+D N M+ W+
Sbjct: 142 DDDPFAPDRAQVSCNST-SNRTIFLHEYPIPRNSSAICIYDTCGWSNDPKKNFKMLHQWM 200
Query: 191 MEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 250
+G+ HGE ++ +D + ++ + + RKVNFVIFVVDG+AVL+S++ ++
Sbjct: 201 TKGISHGETIMWDNDEGNKTGGIKPLGRQYSFLRYITRKVNFVIFVVDGVAVLESIDSNN 260
Query: 251 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQI 310
K Y +I+ TF P+LS DDKPVVVVTHGD LS+ A ++ L ELL I PA+QI
Sbjct: 261 ---KGYTEILHQTFMYPFLSIGDDKPVVVVTHGDRLSIQQCAHVQNELTELLNI-PAQQI 316
Query: 311 FDIPESSDPENELIIVDMLRYCLEHADRNLSCK 343
+ IP S D + ++ ++DML YC+ A++NL K
Sbjct: 317 YAIPGSDDFQTDMAVLDMLHYCVRRAEQNLPVK 349
>gi|115462943|ref|NP_001055071.1| Os05g0274300 [Oryza sativa Japonica Group]
gi|50878346|gb|AAT85121.1| unknown protein [Oryza sativa Japonica Group]
gi|113578622|dbj|BAF16985.1| Os05g0274300 [Oryza sativa Japonica Group]
gi|222630935|gb|EEE63067.1| hypothetical protein OsJ_17875 [Oryza sativa Japonica Group]
Length = 382
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/273 (45%), Positives = 174/273 (63%), Gaps = 7/273 (2%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 132
SL +AK I Y PG +E V G DY +P T+ LL+GP+ +GKS+LVNRI++VF+
Sbjct: 65 SLREAKELIRRYKPGDLVEGVCGTKSGDYVLPDITTFLLVGPRDAGKSALVNRITRVFDK 124
Query: 133 DKFASE--RAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWI 190
D RAQV+ NS GT FL+EY +PR SNS +YDTRSLS++ +N M++ W+
Sbjct: 125 DDDPDAPDRAQVSCNSK-STGTSFLREYRVPRNSNSICIYDTRSLSNNHENNFKMLQRWM 183
Query: 191 MEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 250
+G+ HG+++ +D+ S ++ + RKVNFVIFVV+G +VL+S+E ++
Sbjct: 184 TKGLSHGDIITWDNDNYSKIQNIKSMGRQYSFLRCKTRKVNFVIFVVNGASVLESIENNN 243
Query: 251 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQI 310
K Y ++ TF P+LSF DDKP VVVTHGD L+ R +R L ELLGI P +QI
Sbjct: 244 ---KNYIDMLHKTFMYPFLSFGDDKPAVVVTHGDRLTAQQRMHVRNELVELLGI-PLQQI 299
Query: 311 FDIPESSDPENELIIVDMLRYCLEHADRNLSCK 343
FDI D E +L ++DMLRYC++HA++N K
Sbjct: 300 FDISGCDDYETDLSVLDMLRYCIQHAEQNFPIK 332
>gi|218196465|gb|EEC78892.1| hypothetical protein OsI_19263 [Oryza sativa Indica Group]
Length = 367
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/273 (45%), Positives = 174/273 (63%), Gaps = 7/273 (2%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 132
SL +AK I Y PG +E V G DY +P T+ LL+GP+ +GKS+LVNRI++VF+
Sbjct: 50 SLREAKELIRRYKPGDLVEGVCGTKSGDYVLPDITTFLLVGPRDAGKSALVNRITRVFDK 109
Query: 133 DKFASE--RAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWI 190
D RAQV+ NS GT FL+EY +PR SNS +YDTRSLS++ +N M++ W+
Sbjct: 110 DDDPDAPDRAQVSCNSK-STGTSFLREYRVPRNSNSICIYDTRSLSNNHENNFKMLQRWM 168
Query: 191 MEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 250
+G+ HG+++ +D+ S ++ + RKVNFVIFVV+G +VL+S+E ++
Sbjct: 169 TKGLSHGDIITWDNDNYSKIQNIKSMGRQYSFLRCKTRKVNFVIFVVNGASVLESIENNN 228
Query: 251 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQI 310
K Y ++ TF P+LSF DDKP VVVTHGD L+ R +R L ELLGI P +QI
Sbjct: 229 ---KNYIDMLHKTFMYPFLSFGDDKPAVVVTHGDRLTAQQRMHVRNELVELLGI-PLQQI 284
Query: 311 FDIPESSDPENELIIVDMLRYCLEHADRNLSCK 343
FDI D E +L ++DMLRYC++HA++N K
Sbjct: 285 FDISGCDDYETDLSVLDMLRYCIQHAEQNFPIK 317
>gi|388520931|gb|AFK48527.1| unknown [Lotus japonicus]
Length = 210
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 139/185 (75%)
Query: 48 VDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTT 107
V++R+R V++E+LQ+YDQL+ +L +AK KILSY PGAWIE VGG+ L DYDVPKTT
Sbjct: 26 VNERKRLRVYQEILQTYDQLKIDSKNLKEAKEKILSYRPGAWIEKVGGLKLCDYDVPKTT 85
Query: 108 SLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSF 167
L+L+GP GSGKSSL+NRISKVFE+D FA RAQV+YNS GDGT FL+EY IPR S
Sbjct: 86 CLILVGPSGSGKSSLINRISKVFEDDNFAPARAQVSYNSLNGDGTCFLREYMIPREKTSI 145
Query: 168 SLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 227
LYDTRSLSDD ++N M+K W+ +GV +GELV+R +D+ LR ++ K +K G S
Sbjct: 146 CLYDTRSLSDDLNENNRMLKNWMTKGVCNGELVVRNADNQKLRKSLKHKDNKKGLFSSKS 205
Query: 228 RKVNF 232
R+VN
Sbjct: 206 REVNL 210
>gi|46200523|gb|AAS82599.1| hypothetical protein S250_18C08.34 [Sorghum bicolor]
Length = 301
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/248 (45%), Positives = 159/248 (64%), Gaps = 7/248 (2%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF-- 130
L + K I Y PG W+E VGG + +P+ T+LLL+GP+GSGKS+LVNRI++VF
Sbjct: 55 QLREVKELIRRYKPGDWVEGVGGAKAGHFLLPEITTLLLVGPRGSGKSTLVNRITRVFDK 114
Query: 131 ENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWI 190
++D FA +RAQV+ NS+ + T FL EY IPR S++ +YDT S+D N M+ W+
Sbjct: 115 DDDPFAPDRAQVSCNST-SNRTIFLHEYPIPRNSSAICIYDTCGWSNDPKKNFKMLHQWM 173
Query: 191 MEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 250
+G+ HGE ++ +D + ++ + + RKVNFVIFVVDG+AVL+S++ ++
Sbjct: 174 TKGISHGETIMWDNDEGNKTGGIKPLGRQYSFLRYITRKVNFVIFVVDGVAVLESIDSNN 233
Query: 251 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQI 310
K Y +I+ TF P+LS DDKPVVVVTHGD LS+ A ++ L ELL I PA+QI
Sbjct: 234 ---KGYTEILHQTFMYPFLSIGDDKPVVVVTHGDRLSIQQCAHVQNELTELLNI-PAQQI 289
Query: 311 FDIPESSD 318
+ IP D
Sbjct: 290 YAIPGVVD 297
>gi|5123944|emb|CAB45502.1| putative protein [Arabidopsis thaliana]
gi|7268005|emb|CAB78345.1| putative protein [Arabidopsis thaliana]
Length = 360
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 151/233 (64%), Gaps = 22/233 (9%)
Query: 110 LLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPR-GSNSFS 168
+L+GPKG+GKSSLVN+I++V E+D F +RAQ ++ + GTYF+QEY I R GS SF
Sbjct: 1 MLVGPKGAGKSSLVNKITRVIEDDAFLLDRAQESFGTPSKGGTYFVQEYMISRGGSASFC 60
Query: 169 LYDTRSLSD-DASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 227
LYDTR LS +SDN +MI+ W+ GV HGE VI SDSS L++R+ + G E
Sbjct: 61 LYDTRGLSRISSSDNTSMIEQWMTRGVLHGEPVIWASDSSDLKDRL-IRDGGTGYER--- 116
Query: 228 RKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLS 287
RKVN +IFVV+ + +LKSME E Y ++ T FN P L F+DDKP VV+THGD+LS
Sbjct: 117 RKVNSIIFVVNAVEILKSME----CETSYASMITTAFNSPILLFKDDKPAVVMTHGDMLS 172
Query: 288 LTDRARIRTYLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADRNL 340
+RAR+R +LGELL ES D + I ++L Y L+HAD+N
Sbjct: 173 REERARVRVFLGELL------------ESRDTATAITICNLLCYSLQHADKNF 213
>gi|168027995|ref|XP_001766514.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682159|gb|EDQ68579.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 524
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 176/300 (58%), Gaps = 16/300 (5%)
Query: 55 AVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGP 114
A+ ++ L+ R + + + K+ Y PG W+ GGM SD+ +P+ T+LL++G
Sbjct: 166 ALSARIMYQEASLKKRARRIEEMRLKLQRYEPGQWLVESGGMRKSDFAIPEVTTLLVVGS 225
Query: 115 KGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRS 174
G+GKS+L+N + +V N +RAQV + +GTYFL EY + N+ ++D+R
Sbjct: 226 MGAGKSTLINNLIRVLNNKSQDFDRAQVCGDPG-ENGTYFLNEYMLNESKNNICVFDSRG 284
Query: 175 LSD-DASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFV 233
+ + +D + +++ W+++GVRHG++VIR SDSS ++ + KA + + S R +NFV
Sbjct: 285 MPELKVADGLEVLEDWMVKGVRHGQMVIRTSDSSRVKEAVERKARQGHHKLSKKRHINFV 344
Query: 234 IFVVDGLAVLK-SMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRA 292
IFV++ V K GD+ + +I F P ++F+DD+PVVV+THGD LS DR
Sbjct: 345 IFVINATTVHKIRHSGDTLSRPNFLRI----FKFPLITFKDDRPVVVMTHGDELSEDDRL 400
Query: 293 RIRTYLGELLGIPPAKQIFDIP-------ESSD--PENELIIVDMLRYCLEHADRNLSCK 343
R YLG LLG+ P +FDI E D EN+L+++DML Y L+ ADRNL K
Sbjct: 401 AARIYLGNLLGVSPVDHVFDIAGFTGRVMEDGDQCAENDLLLLDMLEYALQRADRNLPYK 460
>gi|359480106|ref|XP_003632400.1| PREDICTED: uncharacterized protein LOC100854991 [Vitis vinifera]
Length = 379
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 124/245 (50%), Gaps = 14/245 (5%)
Query: 74 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
L++ + K++SY G + GGM D D+P ++LL+G GSGKSSLVN + V
Sbjct: 66 LSELRQKLVSYRSGDFWVPTGGMKREDMDIPPVITILLVGFSGSGKSSLVNLMYSVLGRS 125
Query: 134 KFASERAQVTYNSSVGDGTYFLQEYTIPRGSNS-FSLYDTRSLSDD-ASDNINMIKLWIM 191
A + +S T F++E+ + R S F +YD+R L D ++I + W+
Sbjct: 126 GLIP-FATTSSENSAKCTTKFMEEHNVLRSMQSGFCVYDSRGLDYDLMGESIEEVSEWMT 184
Query: 192 EGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSM-EGDS 250
GV H +L +R D +L + RKVN + VV+ + KS+ +GD
Sbjct: 185 NGVHHNQLCLRTGD--NLMSEEELSEVPGSSSKFTPRKVNCAMVVVNIAEIFKSLKKGD- 241
Query: 251 DVEKQYNQIVAT--TFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAK 308
+ + AT F CP L ++ P++++THGDLLS +R +IR L E LGI
Sbjct: 242 -----WKPLEATRELFRCPALKKCNENPILIMTHGDLLSTEERIKIRLTLCEFLGISETT 296
Query: 309 QIFDI 313
++DI
Sbjct: 297 GVYDI 301
>gi|224068434|ref|XP_002302744.1| predicted protein [Populus trichocarpa]
gi|222844470|gb|EEE82017.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 131/280 (46%), Gaps = 24/280 (8%)
Query: 74 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
L + + K+ Y G + GG+ + D+P ++LL+G GSGKSSLVN + V
Sbjct: 66 LNEVRYKLQMYRSGDFWVPTGGIKKEEMDIPPVITILLVGFSGSGKSSLVNLMYSVLGRS 125
Query: 134 KFASERAQVTYNSSVGDGTYFLQEYTIPRG-SNSFSLYDTRSLS-DDASDNINMIKLWIM 191
AQ + + T +++E+ + R F +YD+R S D + + W+
Sbjct: 126 GLIP-FAQTSSGCASKYTTMYMEEHNVMRSLQGGFCVYDSRGFSYGKIGDALEELSSWMS 184
Query: 192 EGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPS---VIRKVNFVIFVVDGLAVLKSMEG 248
+GV H +L +R D L + A G PS V R VNF + VV+ V K+++
Sbjct: 185 DGVHHNQLCLRSGDDVLLED----DAETAGLRPSSKFVQRTVNFSMVVVNIAEVYKALKA 240
Query: 249 -DSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPA 307
DS + ++ F+ P L ++ P++++THGDLL+ R IR L E LGI
Sbjct: 241 SDSKPLEATREL----FHSPGLRNCNENPMLILTHGDLLTTEQRIDIRIKLCERLGISET 296
Query: 308 KQIFDI---------PESSDPENELIIVDMLRYCLEHADR 338
++DI E SDP + + + L ADR
Sbjct: 297 NGVYDIVCLTEYGFLAEESDPVTAYAVTEAVYRALLIADR 336
>gi|255548537|ref|XP_002515325.1| ATP binding protein, putative [Ricinus communis]
gi|223545805|gb|EEF47309.1| ATP binding protein, putative [Ricinus communis]
Length = 382
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 22/279 (7%)
Query: 74 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
L + + K+ Y G + GG+ + D+P ++LL+G SGKSSLVN + V
Sbjct: 66 LNELRYKLQMYKSGDYWVPTGGIEKEEMDIPSVITILLVGFSSSGKSSLVNLMYSVLGRT 125
Query: 134 KFASERAQVTYNSSVGDGTYFLQEYTIPRGSNS-FSLYDTRSLS-DDASDNINMIKLWIM 191
AQ + + T +++E+ + R S F ++D+R + D + + + W+
Sbjct: 126 GLVP-FAQTSSGGAKNYTTMYMEEHNVMRSMQSGFCVFDSRGFNYDKIGEALEELSSWMT 184
Query: 192 EGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSME-GDS 250
+GV H +L +R D++ L++ + A + +IR+VN + VV+ V K+++ GDS
Sbjct: 185 DGVHHNQLCLRSGDATLLKDDIEAAASR-SSSKFLIRRVNCAMVVVNIAEVYKALKAGDS 243
Query: 251 DVEKQYNQIVAT--TFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAK 308
Q+ AT F P L ++ P++++THGDLL+ +R R + E LGI
Sbjct: 244 ------KQLEATRELFCSPALRKCNENPILILTHGDLLTNEERIEGRIKICERLGIQETN 297
Query: 309 QIFDI---------PESSDPENELIIVDMLRYCLEHADR 338
++D+ E SDP + + + L +DR
Sbjct: 298 GVYDVVCLTEYGFLAEESDPVTAYAVAEAVYRALLISDR 336
>gi|413916052|gb|AFW55984.1| hypothetical protein ZEAMMB73_901421 [Zea mays]
Length = 584
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 83/133 (62%), Gaps = 6/133 (4%)
Query: 84 YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF--ENDKFASERAQ 141
Y PG WIE VGG + +P+ T+LLL+GP+GSGKS+LVNRI++VF ++D FA +RAQ
Sbjct: 172 YKPGDWIEGVGGAKAGHFVLPEVTTLLLVGPRGSGKSTLVNRITRVFDKDDDPFAPDRAQ 231
Query: 142 VTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRH-GELV 200
V+ NS +GT FL+EY IPR NS +L + +S D S N + L + V + G L
Sbjct: 232 VSCNSK-SNGTMFLREYPIPR--NSSALQNIKSEIADVSANPQGLLLEALHSVGYSGALA 288
Query: 201 IRRSDSSSLRNRM 213
S S NR+
Sbjct: 289 KPLMASESAVNRL 301
>gi|297743947|emb|CBI36917.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 14/217 (6%)
Query: 102 DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIP 161
D+P ++LL+G GSGKSSLVN + V A + +S T F++E+ +
Sbjct: 2 DIPPVITILLVGFSGSGKSSLVNLMYSVLGRSGLIP-FATTSSENSAKCTTKFMEEHNVL 60
Query: 162 RGSNS-FSLYDTRSLSDD-ASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHK 219
R S F +YD+R L D ++I + W+ GV H +L +R D+ L +
Sbjct: 61 RSMQSGFCVYDSRGLDYDLMGESIEEVSEWMTNGVHHNQLCLRTGDN--LMSEEELSEVP 118
Query: 220 IGCEPSVIRKVNFVIFVVDGLAVLKSME-GDSDVEKQYNQIVAT--TFNCPYLSFRDDKP 276
RKVN + VV+ + KS++ GD + + AT F CP L ++ P
Sbjct: 119 GSSSKFTPRKVNCAMVVVNIAEIFKSLKKGD------WKPLEATRELFRCPALKKCNENP 172
Query: 277 VVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDI 313
++++THGDLLS +R +IR L E LGI ++DI
Sbjct: 173 ILIMTHGDLLSTEERIKIRLTLCEFLGISETTGVYDI 209
>gi|414886271|tpg|DAA62285.1| TPA: hypothetical protein ZEAMMB73_289405 [Zea mays]
Length = 236
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Query: 84 YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF--ENDKFASERAQ 141
Y PG WIE VGG + +P+ T+LLL+GP+GSGKS+LVNRI++VF ++D FA +RAQ
Sbjct: 139 YKPGDWIEGVGGAKAGHFVLPEVTTLLLVGPRGSGKSTLVNRITRVFDKDDDPFAPDRAQ 198
Query: 142 VTYNSSVGDGTYFLQEYTIPRGSNSFS 168
V+ NS +GT FL+EY IPR S+ S
Sbjct: 199 VSCNSK-SNGTMFLREYPIPRNSSVLS 224
>gi|224128396|ref|XP_002320319.1| predicted protein [Populus trichocarpa]
gi|222861092|gb|EEE98634.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 24/285 (8%)
Query: 74 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
L + + K+ Y G + GG+ + D+P ++LL+G GSGKSSLVN + VF
Sbjct: 66 LNELRYKLQMYRSGDFWVPTGGLKKEEMDIPPVITILLVGFSGSGKSSLVNLMYSVFGRS 125
Query: 134 KFASERAQVTYNSSVGDGTYFLQEYTIPRG-SNSFSLYDTRSLS-DDASDNINMIKLWIM 191
A+ + + T +++E+ + R F +YD+R + D + + W+
Sbjct: 126 GLIP-FARTSSGGATKYTTMYMEEHNVMRSMQGGFCVYDSRGFNYGKIGDALEELSSWMS 184
Query: 192 EGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPS---VIRKVNFVIFVVDGLAVLK-SME 247
+G+ H +L +R D L +G S V R VN + VV+ V K S
Sbjct: 185 DGIHHNQLCLRSGDDVLL----EADTETVGLRSSSKFVQRTVNIPMVVVNIAEVHKASKA 240
Query: 248 GDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPA 307
DS + ++ F+ P L ++ P++++THGDLL+ +R +R L E LGI
Sbjct: 241 SDSKPLEATREL----FHSPALRKCNENPILILTHGDLLTTEERMDMRLRLCERLGISET 296
Query: 308 KQIFDI---------PESSDPENELIIVDMLRYCLEHADRNLSCK 343
++DI E SDP + + + L +DR S K
Sbjct: 297 NGVYDIVCLTEYGFLAEESDPVTAYALAEAVYRALLISDRGHSPK 341
>gi|414588952|tpg|DAA39523.1| TPA: hypothetical protein ZEAMMB73_000332 [Zea mays]
Length = 486
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 96/252 (38%), Gaps = 56/252 (22%)
Query: 84 YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVT 143
Y PG WIE +GG + +P+ T+LLL+GP+G+ KS
Sbjct: 35 YKPGDWIEGIGGAKAGHFVLPEVTTLLLVGPRGNSKS----------------------- 71
Query: 144 YNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRH-GELVIR 202
+GT FL+EY IPR NS +L + +S D S N + L + V + G L
Sbjct: 72 ------NGTMFLREYPIPR--NSSALQNIKSEIADVSANPQGLLLEALHSVGYFGALAKP 123
Query: 203 RSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVAT 262
S S NR+ + E V+ V+ L V D D + + +
Sbjct: 124 LMASESAVNRLDVSS----LEEFVVEHYTAPRMVLAALGV------DHDALISVVEPLLS 173
Query: 263 TFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDPENE 322
C R ++P V GD D L F++P + E
Sbjct: 174 DLPCVK---RPEEPKSVYVGGDYRCQADSPNTHIALA-----------FEVPGGWNQEKT 219
Query: 323 LIIVDMLRYCLE 334
++V +L+ C E
Sbjct: 220 AMVVTVLQTCPE 231
>gi|125802987|ref|XP_001346001.1| PREDICTED: interferon-induced protein 44 [Danio rerio]
Length = 293
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 30/165 (18%)
Query: 89 WIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSV 148
W+EN TLSD +V K +L++GP G+GKSS +N I+ VF+ + S +A V NS+
Sbjct: 37 WLEN---FTLSDPNV-KDIKILVVGPSGAGKSSFINSINSVFQ--RRISSKALV--NSAG 88
Query: 149 GDGTYF---LQEYTIPRGSNS--FSLYDTRSLSDD------ASDNINMIKLWIMEGVRHG 197
GD F L+ TI G S F +D L + D I + + +G +
Sbjct: 89 GDNHSFTEKLKRLTIKNGKTSLPFVFFDIMGLEAEEFHGSKTEDIIKAVFGHVKDGYKFN 148
Query: 198 ELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAV 242
E + K +PS+ + V++++DG V
Sbjct: 149 E-----------EQSIDYKDQHYTSDPSLSDQCFCVVYIIDGKIV 182
>gi|260833114|ref|XP_002611502.1| hypothetical protein BRAFLDRAFT_63863 [Branchiostoma floridae]
gi|229296873|gb|EEN67512.1| hypothetical protein BRAFLDRAFT_63863 [Branchiostoma floridae]
Length = 275
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 48/286 (16%)
Query: 83 SYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQV 142
SY G ++N L + + L G GSGKSS VN + K E +
Sbjct: 12 SYQTGQIVQNFPDARLGEMK-NTVVRVGLFGLTGSGKSSFVNTVVKCVE----GKDEELA 66
Query: 143 TYNSSVGDGTYFLQEYTI----PRGSNSFSLYDTRS---LSDDASDNINMIKLWIMEG-V 194
SS +GT L E+ + P F L DTR L DDA + L I+ G +
Sbjct: 67 IVQSSGAEGTIVLDEFALGGGGPDKKPGFKLLDTRGFDVLGDDARKEM----LAILNGDI 122
Query: 195 RHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGL-AVLKSMEGDSDVE 253
R G+ VI R+ S+ M + +K+ R+++ V++ V G L+S S +
Sbjct: 123 RSGQ-VIDRARGESMETSMTGEDYKLS------REIHVVLWFVKGTDPRLESGTYQSHMA 175
Query: 254 KQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLS---LTDRAR--IRTYLGELLGIPPAK 308
Q++ R K + ++TH D L TD+ R I E+ G
Sbjct: 176 YLKKQLID----------RAMKTLTIITHDDELQRKGCTDQQRRNIAEQAREITGSDQDD 225
Query: 309 QIF------DIPESSDPENELIIVDMLRYCLEHADRNLSCKSCARN 348
F P SSD E + ++D+++ L A+ + + R
Sbjct: 226 TYFLTNYTKGKPFSSDQEQQ--VLDVVKTALTAAEYTIRMRQSKRK 269
>gi|433651027|ref|YP_007296029.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium smegmatis JS623]
gi|433300804|gb|AGB26624.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium smegmatis JS623]
Length = 245
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 72 GSLTDAKNKI-LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF 130
G ++ N I L++ P A + V D DVP T+ +IGP GSGKS+L+ +++++
Sbjct: 3 GPVSLGANDIHLTFGPNAVLRGV------DLDVPAGTTTAVIGPSGSGKSTLLRTLNRLY 56
Query: 131 ENDK 134
E DK
Sbjct: 57 EPDK 60
>gi|291241708|ref|XP_002740752.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 387
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 105/284 (36%), Gaps = 63/284 (22%)
Query: 78 KNKILSYTPGAW--IENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKF 135
+NK+ YT G + IE+ G+ + ++ P + + GP G+GKSS + ++
Sbjct: 56 RNKLREYTFGEYNHIESFEGLDVLEFQQPGAIKIGVFGPAGAGKSSFIYTCERIINE--- 112
Query: 136 ASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVR 195
R + G+GT L +Y G + L DTR + + V
Sbjct: 113 -INRGTADVKTEGGEGTIRLMDYLY--GDWHYKLVDTRGFGTYGISELAAFSNILFGNVT 169
Query: 196 HGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGL-AVLKSMEGDSDVEK 254
G V SD+ + ++G E V ++ V+FVV +K +E
Sbjct: 170 VGNEVDFNSDA---------RPAEVGEEGDVFNWIHSVVFVVSAKDPRIKQLE------- 213
Query: 255 QYNQIVATTFNC--PYLSFRDDKPVVVVTHGDLLSLTDRARIRT---------------- 296
T+ N YL R + V+TH D + ++ I+T
Sbjct: 214 -------TSLNPMRKYLRPRGIGTITVITHRDQVDESEIEDIKTSVSAATGSAINHTFFV 266
Query: 297 --YLGELLGIPPAKQIFDIPESSDPENELIIVDMLRYCLEHADR 338
Y G++L PP P+ E I D+L L +R
Sbjct: 267 TNYTGDILSQPPR-----------PDIEGITCDVLTAALIMGER 299
>gi|260833104|ref|XP_002611497.1| hypothetical protein BRAFLDRAFT_63868 [Branchiostoma floridae]
gi|229296868|gb|EEN67507.1| hypothetical protein BRAFLDRAFT_63868 [Branchiostoma floridae]
Length = 292
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 111 LIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLY 170
LIGP GSGKSS +N + + D + ++ G+GT LQE+ + N F L
Sbjct: 48 LIGPIGSGKSSFINTCERALKPD---LRKGTAEIQTANGEGTIVLQEF-LDDFDNDFCLV 103
Query: 171 DTRSLSDDASDNINMIKLWIMEGVRHGELV 200
DTR L D + + ++ GE+V
Sbjct: 104 DTRGLFQHNIDEFTALGDIVYGRIKPGEVV 133
>gi|375138966|ref|YP_004999615.1| polar amino acid ABC transporter ATPase [Mycobacterium rhodesiae
NBB3]
gi|359819587|gb|AEV72400.1| ABC-type polar amino acid transport system, ATPase component
[Mycobacterium rhodesiae NBB3]
Length = 246
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 77 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
AK+ LS+ P A + V D +VP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 12 AKDIHLSFGPNAVLRGV------DIEVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 63
>gi|399577389|ref|ZP_10771142.1| phosphate ABC transporter ATP-binding protein [Halogranum salarium
B-1]
gi|399237772|gb|EJN58703.1| phosphate ABC transporter ATP-binding protein [Halogranum salarium
B-1]
Length = 292
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 34/247 (13%)
Query: 72 GSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSL---VNRISK 128
GS+T A I + W + + D +PK +IGP G GKS+ +NR++
Sbjct: 38 GSVTSANTVIEARNVNVWYNDDQALNDIDMRIPKKQVTAMIGPSGCGKSTFLRCINRMND 97
Query: 129 VFENDKFASE---RAQVTYNSSVGD-------GTYFLQEYTIPRGSNSFSLYD------- 171
+ + + E + Y+S V G F P+ S+YD
Sbjct: 98 LVDAARIEGELLFNGKNVYDSDVDPVALRRRIGMVFQHPNPFPK-----SIYDNVAYGLR 152
Query: 172 ----TRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 227
T ++ D + LW R E +D S + + C A I +P V+
Sbjct: 153 LQGKTDNMDQRVEDALKSAALWDEVKDRLDE---SGTDLSGGQQQRLCIARAIAPDPEVL 209
Query: 228 RKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLS 287
++ +D +A + + +D+ ++Y +V T N + DK V +T G+L+
Sbjct: 210 L-MDEPASALDPVATSQVEDLIADLAEEYT-VVIVTHNMQQAARISDKTAVFLTGGELVE 267
Query: 288 LTDRARI 294
D +I
Sbjct: 268 FDDTQKI 274
>gi|374608582|ref|ZP_09681380.1| ABC transporter related protein [Mycobacterium tusciae JS617]
gi|373553168|gb|EHP79763.1| ABC transporter related protein [Mycobacterium tusciae JS617]
Length = 242
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 23/148 (15%)
Query: 82 LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQ 141
LS+ P A + V D D P T+ +IGP GSGKS+L+ +++++E ER
Sbjct: 13 LSFGPNAVLRGV------DIDAPAGTTTAVIGPSGSGKSTLLRTLNRLYE-----PERGD 61
Query: 142 VTYN--SSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGEL 199
+ + S + D L++ I F+L+ RS+ D+ + +K E R EL
Sbjct: 62 ILLDGRSVLADNPDRLRQR-IGMVFQQFNLFPHRSVLDNVTLAPRKLKRLDAEQAR--EL 118
Query: 200 VIRRSDSSSLRNRMRCKAHKIGCEPSVI 227
+ + D LR HK PS +
Sbjct: 119 GLAQLDRVGLR-------HKAAVRPSTL 139
>gi|392419058|ref|YP_006455663.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium chubuense NBB4]
gi|390618834|gb|AFM19984.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium chubuense NBB4]
Length = 247
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 77 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
A++ LS+ P A + V D DV TS +IGP GSGKS+L+ +++++E D+
Sbjct: 13 ARDLHLSFGPNAVLRGV------DLDVAAGTSTAVIGPSGSGKSTLLRTLNRLYEPDR 64
>gi|260833092|ref|XP_002611491.1| hypothetical protein BRAFLDRAFT_63874 [Branchiostoma floridae]
gi|229296862|gb|EEN67501.1| hypothetical protein BRAFLDRAFT_63874 [Branchiostoma floridae]
Length = 317
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 111 LIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLY 170
L GP GSGKSS +N + K R ++ G+GT LQEY + N F L
Sbjct: 92 LFGPAGSGKSSFINTCERAM---KQGLRRGNADIQTAYGEGTIVLQEY-LDDIDNDFCLV 147
Query: 171 DTRSLSDDASDNINMIKLWIMEGVRHGELV 200
DTR D + + + +R G+ V
Sbjct: 148 DTRGFFQHNIDELTALADIVHGRIRPGQEV 177
>gi|404423270|ref|ZP_11004924.1| ABC transporter ATP-binding protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403654510|gb|EJZ09422.1| ABC transporter ATP-binding protein [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 245
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 77 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
AK+ LS+ P + V D DVP T+ +IGP GSGKS+L+ +++++E D
Sbjct: 11 AKDIHLSFGPNKVLRGV------DLDVPAGTTTAIIGPSGSGKSTLLRTLNRLYEPD 61
>gi|407981360|ref|ZP_11162062.1| ABC transporter family protein [Mycobacterium hassiacum DSM 44199]
gi|407377024|gb|EKF25938.1| ABC transporter family protein [Mycobacterium hassiacum DSM 44199]
Length = 243
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 77 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
A++ LS+ P + V D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 9 ARDIHLSFGPSQVLRGV------DIDVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 60
>gi|189514425|ref|XP_001919750.1| PREDICTED: interferon-induced protein 44-like [Danio rerio]
Length = 296
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 89 WIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSV 148
W+EN +T S+ DV K +L++GP G+GKSS +N I+ F+ S +A V NS+
Sbjct: 40 WLEN---LTPSNPDV-KDIKILVVGPAGAGKSSFINSINSAFQG--HISSKALV--NSAG 91
Query: 149 GDGTYF---LQEYTIPRGSNS--FSLYDTRSL 175
G F L+ +TI G S F +D L
Sbjct: 92 GFSHSFTEKLKGFTIKNGKTSLPFVFFDIMGL 123
>gi|383824201|ref|ZP_09979385.1| ABC transporter ATP-binding protein [Mycobacterium xenopi
RIVM700367]
gi|383337474|gb|EID15850.1| ABC transporter ATP-binding protein [Mycobacterium xenopi
RIVM700367]
Length = 249
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 77 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
K+ LS+ P A + V D DVP ++ +IGP GSGKS+L+ +++++E D+
Sbjct: 15 GKDIHLSFGPNAVLRGV------DIDVPAGSTAAVIGPSGSGKSTLLRTLNRLYEPDR 66
>gi|118471659|ref|YP_891109.1| ABC transporter ATP-binding protein [Mycobacterium smegmatis str.
MC2 155]
gi|118172946|gb|ABK73842.1| ABC transporter, ATP-binding protein GluA [Mycobacterium smegmatis
str. MC2 155]
Length = 245
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 132
SLT A N L++ P + V D DVP T+ +IGP GSGKS+L+ +++++E
Sbjct: 8 SLT-ATNIHLAFGPNKVLRGV------DLDVPAGTTTAVIGPSGSGKSTLLRTLNRLYEP 60
Query: 133 DK 134
D+
Sbjct: 61 DE 62
>gi|441218622|ref|ZP_20977829.1| phosphate ABC superfamily ATP binding cassette transporter, ABC
protein [Mycobacterium smegmatis MKD8]
gi|440623867|gb|ELQ85741.1| phosphate ABC superfamily ATP binding cassette transporter, ABC
protein [Mycobacterium smegmatis MKD8]
Length = 245
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 132
SLT A N L++ P + V D DVP T+ +IGP GSGKS+L+ +++++E
Sbjct: 8 SLT-ATNIHLAFGPNKVLRGV------DLDVPAGTTTAVIGPSGSGKSTLLRTLNRLYEP 60
Query: 133 DK 134
D+
Sbjct: 61 DE 62
>gi|399991095|ref|YP_006571446.1| glutamine ABC transporter, ATP-binding protein [Mycobacterium
smegmatis str. MC2 155]
gi|399235658|gb|AFP43151.1| Glutamine ABC transporter, ATP-binding protein [Mycobacterium
smegmatis str. MC2 155]
Length = 237
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 77 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
A N L++ P + V D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 3 ATNIHLAFGPNKVLRGV------DLDVPAGTTTAVIGPSGSGKSTLLRTLNRLYEPDE 54
>gi|408500443|ref|YP_006864362.1| ABC transporter, permease/ATP binding protein [Bifidobacterium
asteroides PRL2011]
gi|408465267|gb|AFU70796.1| ABC transporter, permease/ATP binding protein [Bifidobacterium
asteroides PRL2011]
Length = 635
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 76 DAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 131
D + + Y PG N+ + L D+ VP +++ L+GP G+GK+++VN +S+ ++
Sbjct: 364 DFNDVVFKYEPGG--RNI--LNLVDFHVPAGSTVALVGPTGAGKTTIVNLLSRFYD 415
>gi|443469976|ref|ZP_21060114.1| Serine protein kinase (prkA protein), P-loop containing
[Pseudomonas pseudoalcaligenes KF707]
gi|442899495|gb|ELS25943.1| Serine protein kinase (prkA protein), P-loop containing
[Pseudomonas pseudoalcaligenes KF707]
Length = 640
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ +V E F + + + S +G DG +EY
Sbjct: 102 KKQVLYLLGPVGGGKSSLAEKLKQVMERVPFYAIKGSPVFESPLGLFNPDEDGAILEEEY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|156395774|ref|XP_001637285.1| predicted protein [Nematostella vectensis]
gi|156224396|gb|EDO45222.1| predicted protein [Nematostella vectensis]
Length = 439
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 78 KNKILSYTPGAWIENVG----GMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
KN +L Y G+ + G+ +SD D + + L GP GSGK+S + + +
Sbjct: 100 KNSLLEYEFGSRTTKLAFEKDGLDISDMDRVR---IALFGPTGSGKTSFIGTLER----- 151
Query: 134 KFASERAQVTYNSSVG-DGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIME 192
+ Q + G +GT L+EY F+L DTR D DN L IM
Sbjct: 152 SLLGKEKQTAFEQGAGSEGTVVLEEYL---SQLRFNLVDTRGFF-DIDDNTAEECLNIMT 207
Query: 193 GVRHGELVIRRS------DSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDG 239
G IRR D S++ +R C +V+ VIFVV
Sbjct: 208 GRVSVGSEIRRDYDGQDIDPSAVSSRRAC--------SRFSDRVHAVIFVVQA 252
>gi|453050007|gb|EME97566.1| ABC transporter [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 262
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 72 GSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 131
GS T A N+I+ TPGA + V + + + ++ LIG GSGKS+L+ I+ +
Sbjct: 35 GSATAALNRIVKRTPGAGVREVHAVKGVSFTAYRGQAIGLIGSNGSGKSTLLKAIAGLLP 94
Query: 132 NDK 134
++
Sbjct: 95 TER 97
>gi|312129394|ref|YP_003996734.1| ABC transporter related protein [Leadbetterella byssophila DSM
17132]
gi|311905940|gb|ADQ16381.1| ABC transporter related protein [Leadbetterella byssophila DSM
17132]
Length = 582
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 22/133 (16%)
Query: 59 EVLQSYDQLRTRIGSLTDAKNKI------LSYTPGAWI-ENVGGMTLSDYDVPKTTSLLL 111
E+L DQ+ GS + K + +Y WI +N+ ++D+P SL
Sbjct: 316 EILDDEDQMEQESGSTHEIKGHLKFDNVSFAYKGEDWILKNI------NFDLPAGKSLAF 369
Query: 112 IGPKGSGKSSLVNRISKVFENDKF-----ASERAQVTYNSSVGDGTYFLQEYTIPRGSNS 166
+GP G+GK+S +N +++ ++ K E ++T NS LQ+ + RG
Sbjct: 370 VGPTGAGKTSTINLLTRFYDFQKGNIYIDGKEIREITLNSLRKQVGVVLQDVFLFRG--- 426
Query: 167 FSLYDTRSLSDDA 179
S+ D L D++
Sbjct: 427 -SILDNLRLGDES 438
>gi|228963954|ref|ZP_04125088.1| ABC transporter [Bacillus thuringiensis serovar sotto str. T04001]
gi|228795732|gb|EEM43206.1| ABC transporter [Bacillus thuringiensis serovar sotto str. T04001]
Length = 336
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 39 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 98
GS S ++++D R++ ++ Q + L+ SL + NKIL +NV
Sbjct: 63 GSFQSLNTILDSSTRESTGQQCYQFNETLKFNSVSLGISGNKIL--------DNV----- 109
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF 130
+D+ K +L +IGP GSGK++++N + K +
Sbjct: 110 -SFDMKKGETLTIIGPSGSGKTTIINLLEKFY 140
>gi|402562124|ref|YP_006604848.1| ABC transporter [Bacillus thuringiensis HD-771]
gi|401790776|gb|AFQ16815.1| ABC transporter [Bacillus thuringiensis HD-771]
Length = 576
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 39 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 98
GS S ++++D R++ ++ Q + L+ SL + NKIL +NV
Sbjct: 303 GSFQSLNTILDSSTRESTGQQCYQFNETLKFNSVSLGISGNKIL--------DNVS---- 350
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF 130
+D+ K +L +IGP GSGK++++N + K +
Sbjct: 351 --FDMKKGETLTIIGPSGSGKTTIINLLEKFY 380
>gi|399912048|ref|ZP_10780362.1| PrkA family serine protein kinase [Halomonas sp. KM-1]
Length = 640
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 162
L L+GP G GKSSL R+ + E+ F + + Y S +G DG +EY IPR
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMEHIPFYAIKGSPVYESPLGLFSPEEDGELLEKEYGIPR 165
>gi|284046469|ref|YP_003396809.1| ABC transporter [Conexibacter woesei DSM 14684]
gi|283950690|gb|ADB53434.1| ABC transporter related protein [Conexibacter woesei DSM 14684]
Length = 295
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 43/227 (18%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQ-EYTIPRGSNSF 167
L LIGP G GK++L+ ++++ E K AS + ++ DGT E T R +
Sbjct: 77 LALIGPSGCGKTTLLRSLNRLTELTKTASMKGRIAL-----DGTDIATLEPTALRRRVTM 131
Query: 168 SLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVI 227
DN+ +++ E RR LR+ ++ + G V
Sbjct: 132 VFQQPNPFPMSVFDNVA----YVLR-----EQASRRPRKRELRSAVQSALERAGLWEEVA 182
Query: 228 RKVNFVIFVVDG-----LAVLKSMEGDSDV----------EKQYNQIVATTFNCPYLSFR 272
++ + G L + +++ D +V + Q Q++ ++ R
Sbjct: 183 GDLSHPALRLSGGQQQRLCIARALAADPEVLLLDEPCSALDPQSTQVIEELI----VTLR 238
Query: 273 DDKPVVVVTHGDLLSLTDRARIR-----TYLGELLGIPPAKQIFDIP 314
+ VV+VTH +L RI YLGEL+ PA Q+F P
Sbjct: 239 EQVAVVIVTH----NLQQAYRIADYVAFMYLGELVEYGPADQVFGAP 281
>gi|335438066|ref|ZP_08560821.1| phosphate ABC transporter ATP-binding protein [Halorhabdus tiamatea
SARL4B]
gi|334893240|gb|EGM31457.1| phosphate ABC transporter ATP-binding protein [Halorhabdus tiamatea
SARL4B]
Length = 307
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 37/285 (12%)
Query: 31 SMNSGDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWI 90
S + DD RD+ D D ++ RE TR G+ A+ + S +
Sbjct: 21 SGDGTDDSTGRDTADPTSDSHLSRSITRE------GTTTRDGA---AETVLESRNLDVYY 71
Query: 91 ENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSL---VNRISKVFENDKFASE---RAQVTY 144
+V + ++PK LIGP G GKS+ +NR++ + + + E R + Y
Sbjct: 72 NDVQALQDISLEIPKNRVTALIGPSGCGKSTFLRSINRMNDLIDAARIEGELRFRGKNVY 131
Query: 145 NSSVGD-------GTYFLQEYTIPRGSNSFSLYDTRSLS---DDASDNINMIKLWIMEGV 194
+ V G F P+ S+YD + D ++N++ ++
Sbjct: 132 DDDVDPVALRRKIGMVFQHPNPFPK-----SIYDNVAYGLRIQDETENLDEKVETALKRA 186
Query: 195 RHGELVIRRSDSSSL-----RNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGD 249
E V + D S+L + + C A I +P VI ++ +D +A K +
Sbjct: 187 ALFEEVEDQLDESALDLSGGQQQRLCIARAIAVDPEVIL-MDEPASALDPIATSKIEDLI 245
Query: 250 SDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARI 294
++ ++Y +V T N + DK V +T G+L+ D +I
Sbjct: 246 EELAEEYT-VVIVTHNMQQAARISDKTAVFLTGGELVEYDDTEKI 289
>gi|355745390|gb|EHH50015.1| hypothetical protein EGM_00773 [Macaca fascicularis]
Length = 452
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 120/294 (40%), Gaps = 59/294 (20%)
Query: 70 RIGSLTDAKNKILS----YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNR 125
RI + +NK+L+ Y P A D+ +LL+GP GSGKSS N
Sbjct: 170 RIMKAREHRNKLLADIRAYKPYA-------------DLVSEIRILLVGPVGSGKSSFFNS 216
Query: 126 ISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGSNS----FSLYDTRSLSD 177
+ VF VT + VG T + E Y++ G N F L DT L
Sbjct: 217 VKSVFH--------GHVTGQAIVGSDTTSITERYRIYSVKDGKNGKSLPFMLCDTMGLDG 268
Query: 178 DASDNINMIKL-WIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFV 236
+ M + +I++G I + R + + PS+ +++ V +V
Sbjct: 269 AEGAGLCMDDIPYILKG------CIPDRYQFNPRKPITPEHSTFITSPSLKDRIHCVAYV 322
Query: 237 VDGLAVLKSMEG-DSDVEKQYNQIVATTFNC-----PYLSFRDDKPVVVVTHGDLLSLT- 289
+D + S++ S + ++ Q+ NC L+ DD ++ + L+L+
Sbjct: 323 LD----INSIDNLSSKMLAKFKQVHKEVLNCGVAHVALLTKVDDCSEIL--QDNFLNLSR 376
Query: 290 --DRARIRTYLGELLGIPPAKQIFDIPESS----DPENELIIVDMLRYCLEHAD 337
R + ++LGIP + + +S DP N+++I+ LR L AD
Sbjct: 377 SMTSQRQVMNVHKMLGIPISSILMVGNYASDLELDPMNDILILSALRQMLRAAD 430
>gi|225164376|ref|ZP_03726639.1| ABC transporter related [Diplosphaera colitermitum TAV2]
gi|224801008|gb|EEG19341.1| ABC transporter related [Diplosphaera colitermitum TAV2]
Length = 279
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 101 YDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQ--VTYNSSVGDGTYFLQEY 158
+DV +L +IGP GSGKS+L++ + ++++ D AS R Q T GDG + +
Sbjct: 43 FDVAPGETLAIIGPSGSGKSTLMHLLLRLYDYDAPASIRIQSSTTNQFPAGDG-HGRELR 101
Query: 159 TIPR 162
TIPR
Sbjct: 102 TIPR 105
>gi|218781781|ref|YP_002433099.1| ABC transporter [Desulfatibacillum alkenivorans AK-01]
gi|218763165|gb|ACL05631.1| ABC transporter related [Desulfatibacillum alkenivorans AK-01]
Length = 256
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 90 IENVGGMTLSD---YDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNS 146
++ GG+T D ++VPK + LIGP G+GK+++ N I+ ++ D R V +N
Sbjct: 10 VKTFGGLTAVDEVSFEVPKGSIFGLIGPNGAGKTTVFNLITGNYKPD-----RGAVVFNG 64
Query: 147 S--VGDGTYFLQEYTIPRGSNSFSLYDTRSLSDD 178
G T+ + E + R + L+ S+ ++
Sbjct: 65 ENITGRITHKIVELGVARTFQTIRLFQEMSVLEN 98
>gi|372270266|ref|ZP_09506314.1| PrkA family serine protein kinase [Marinobacterium stanieri S30]
Length = 640
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL R+ + E+ F + + + S +G D QEY
Sbjct: 102 KKQILYLLGPVGGGKSSLAERLKHLMEHIPFYAIKGSPVFESPLGLFNPEEDAEILEQEY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|328871427|gb|EGG19797.1| hypothetical protein DFA_06899 [Dictyostelium fasciculatum]
Length = 277
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 108 SLLLIGPKGSGKSSLVNRISKVFENDKFAS--ERAQVTYNSSVGDGTYFLQEYTIPRGSN 165
+++ +GP GSGKS ++N I + +K S + VT ++ GT + G+N
Sbjct: 24 TVVFVGPSGSGKSEIINAIHDYCDTEKVESRLDPKSVTQDAVRDVGTLNFPNHN---GTN 80
Query: 166 -SFSLYDTRSLSDDASDNINMIKLW 189
+ + DTR L+D S + MI W
Sbjct: 81 FALRIVDTRGLTDSTSSFVQMIPQW 105
>gi|320167460|gb|EFW44359.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 224
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 90 IENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG 149
+ ++ G L +P TT+L+L G KGSGKS+L+ + V + AS VT + G
Sbjct: 54 LADLTGYALGTLQLPNTTALVLTGGKGSGKSALLMELLGVATGSQAAS----VTAATEGG 109
Query: 150 DGTYFLQEYTIPRGSNSFSLYDTR 173
G+ L S + + Y +R
Sbjct: 110 SGSVTLPRILATLPSGTIAAYTSR 133
>gi|418155891|ref|ZP_12792616.1| ABC transporter family protein [Streptococcus pneumoniae GA16242]
gi|353819597|gb|EHD99789.1| ABC transporter family protein [Streptococcus pneumoniae GA16242]
Length = 343
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 121
IGS+ K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSIGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHADQRVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|149007399|ref|ZP_01831042.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP18-BS74]
gi|417677632|ref|ZP_12327037.1| ABC transporter family protein [Streptococcus pneumoniae GA17545]
gi|418097049|ref|ZP_12734157.1| ABC transporter family protein [Streptococcus pneumoniae GA16531]
gi|418113243|ref|ZP_12750241.1| ABC transporter family protein [Streptococcus pneumoniae GA41538]
gi|418226289|ref|ZP_12852915.1| ABC transporter family protein [Streptococcus pneumoniae NP112]
gi|419467568|ref|ZP_14007448.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA05248]
gi|419513292|ref|ZP_14052924.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA05578]
gi|419517499|ref|ZP_14057113.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA02506]
gi|421284042|ref|ZP_15734826.1| ABC transporter family protein [Streptococcus pneumoniae GA04216]
gi|421299389|ref|ZP_15750075.1| ABC transporter family protein [Streptococcus pneumoniae GA60080]
gi|147760971|gb|EDK67940.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP18-BS74]
gi|332071905|gb|EGI82393.1| ABC transporter family protein [Streptococcus pneumoniae GA17545]
gi|353767611|gb|EHD48144.1| ABC transporter family protein [Streptococcus pneumoniae GA16531]
gi|353782174|gb|EHD62610.1| ABC transporter family protein [Streptococcus pneumoniae GA41538]
gi|353879855|gb|EHE59676.1| ABC transporter family protein [Streptococcus pneumoniae NP112]
gi|379542481|gb|EHZ07637.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA05248]
gi|379634457|gb|EHZ99022.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA05578]
gi|379637791|gb|EIA02341.1| cobW/HypB/UreG, nucleotide-binding domain protein [Streptococcus
pneumoniae GA02506]
gi|395879833|gb|EJG90889.1| ABC transporter family protein [Streptococcus pneumoniae GA04216]
gi|395899404|gb|EJH10345.1| ABC transporter family protein [Streptococcus pneumoniae GA60080]
Length = 343
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 121
IGS+ K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSIGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQRVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|355558122|gb|EHH14902.1| hypothetical protein EGK_00906 [Macaca mulatta]
Length = 452
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 59/294 (20%)
Query: 70 RIGSLTDAKNKILS----YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNR 125
RI + +NK+L+ Y P A D+ +LL+GP GSGKSS N
Sbjct: 170 RIMKAREHRNKLLADIRAYKPYA-------------DLVSEIRILLVGPVGSGKSSFFNS 216
Query: 126 ISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGSNS----FSLYDTRSLSD 177
+ VF VT + VG T + E Y++ G N F L DT L
Sbjct: 217 VKSVFH--------GHVTGQAIVGSDTTSITERYRIYSVKDGKNGKSLPFMLCDTMGLDG 268
Query: 178 DASDNINMIKL-WIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFV 236
+ M + +I++G I + R + + PS+ +++ V +V
Sbjct: 269 AEGAGLCMDDIPYILKG------CIPDRYQFNPRKPITPEHSTFITSPSLKDRIHCVAYV 322
Query: 237 VDGLAVLKSMEG-DSDVEKQYNQIVATTFNC-----PYLSFRDDKPVVVVTHGDLLSLT- 289
+D + S++ S + ++ Q+ NC L+ DD ++ + L+L+
Sbjct: 323 LD----INSIDNLSSKMLAKFKQVHKEVLNCGVAHVALLTKVDDCSEIL--QDNFLNLSR 376
Query: 290 --DRARIRTYLGELLGIPPAKQIFDIPESS----DPENELIIVDMLRYCLEHAD 337
R + ++LG+P + + +S DP N+++I+ LR L AD
Sbjct: 377 SMTSQRQVMNVHKMLGVPISSILMVGNYASDLELDPMNDILILSALRQMLRAAD 430
>gi|399522524|ref|ZP_10763187.1| putative serine protein kinase, PrkA [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399109388|emb|CCH39748.1| putative serine protein kinase, PrkA [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 640
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDY 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S+ S + T+ L + D ++KL+
Sbjct: 162 GIPRRYLSSIMSPWATKRLQEFGGDISQFRVVKLY 196
>gi|395497434|ref|ZP_10429013.1| ABC transporter ATP-binding protein [Pseudomonas sp. PAMC 25886]
Length = 615
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Query: 82 LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFA----- 136
SY P A + G+ D +P L ++GP G GKS+LV +++ +E A
Sbjct: 373 FSYVPSAQTPVINGL---DLHIPAGEVLAIVGPSGHGKSTLVQLLTRFYEVQSGAVRLDG 429
Query: 137 ---SERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDAS 180
E AQ +VG LQ+ + GS +L L+DDA+
Sbjct: 430 IDVRELAQHALRRNVG---VVLQDNVLFSGSILDNLRLAAPLADDAT 473
>gi|330505269|ref|YP_004382138.1| putative serine protein kinase PrkA [Pseudomonas mendocina NK-01]
gi|328919555|gb|AEB60386.1| putative serine protein kinase, PrkA [Pseudomonas mendocina NK-01]
Length = 640
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDY 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S+ S + T+ L + D ++KL+
Sbjct: 162 GIPRRYLSSIMSPWATKRLQEFGGDISQFRVVKLY 196
>gi|92113009|ref|YP_572937.1| putative serine protein kinase PrkA [Chromohalobacter salexigens
DSM 3043]
gi|91796099|gb|ABE58238.1| putative serine protein kinase, PrkA [Chromohalobacter salexigens
DSM 3043]
Length = 640
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL R+ + E+ F + + + S +G DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAERLKLLMEHVPFYAIKGSPVFESPLGLFSPEEDGELLEKEY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|421207406|ref|ZP_15664454.1| ABC transporter family protein [Streptococcus pneumoniae 2090008]
gi|421230525|ref|ZP_15687186.1| ABC transporter family protein [Streptococcus pneumoniae 2061376]
gi|421292792|ref|ZP_15743524.1| ABC transporter family protein [Streptococcus pneumoniae GA56348]
gi|421311091|ref|ZP_15761703.1| ABC transporter family protein [Streptococcus pneumoniae GA58981]
gi|444410264|ref|ZP_21206807.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0076]
gi|444412645|ref|ZP_21208966.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0153]
gi|444422815|ref|ZP_21218456.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0446]
gi|395572978|gb|EJG33570.1| ABC transporter family protein [Streptococcus pneumoniae 2090008]
gi|395593029|gb|EJG53282.1| ABC transporter family protein [Streptococcus pneumoniae 2061376]
gi|395891353|gb|EJH02351.1| ABC transporter family protein [Streptococcus pneumoniae GA56348]
gi|395913470|gb|EJH24322.1| ABC transporter family protein [Streptococcus pneumoniae GA58981]
gi|444274607|gb|ELU80254.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0153]
gi|444277947|gb|ELU83435.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0076]
gi|444287845|gb|ELU92754.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0446]
Length = 323
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 121
IGS+ K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSIGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQRVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|383822708|ref|ZP_09977925.1| polar amino acid ABC transporter ATPase [Mycobacterium phlei
RIVM601174]
gi|383330795|gb|EID09315.1| polar amino acid ABC transporter ATPase [Mycobacterium phlei
RIVM601174]
Length = 244
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 27 DIDVPAGTTTAVIGPSGSGKSTLLRTLNRLYEPDR 61
>gi|108802343|ref|YP_642540.1| ABC transporter-like protein [Mycobacterium sp. MCS]
gi|119871496|ref|YP_941448.1| ABC transporter-like protein [Mycobacterium sp. KMS]
gi|108772762|gb|ABG11484.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium sp. MCS]
gi|119697585|gb|ABL94658.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium sp. KMS]
Length = 247
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 30 DIDVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 64
>gi|402855037|ref|XP_003892153.1| PREDICTED: interferon-induced protein 44-like [Papio anubis]
Length = 452
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 119/314 (37%), Gaps = 99/314 (31%)
Query: 70 RIGSLTDAKNKILS----YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNR 125
RI + +NK+L+ Y P A D+ +LL+GP GSGKSS N
Sbjct: 170 RIMKAREHRNKLLADIRAYKPYA-------------DLVSEIRILLVGPVGSGKSSFFNS 216
Query: 126 ISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGSNS----FSLYDTRSLSD 177
+ VF VT + VG T + E Y++ G N F L DT L
Sbjct: 217 VKSVFH--------GHVTGQAIVGSDTTSITERYRIYSVKDGKNGKSLPFMLCDTMGLDG 268
Query: 178 DASDNINMIKL-WIMEGV---------------RHGELVIRRSDSSSLRNRMRCKAHKIG 221
+ M + +I++G H + S SL++R+ C A+ +
Sbjct: 269 AEGAGLCMDDIPYILKGCIPDRYQFNPRKPITPEHSTFIT----SPSLKDRIHCVAYVLD 324
Query: 222 CEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNC-----PYLSFRDDKP 276
I +D L+ S + ++ Q+ NC L+ DD
Sbjct: 325 ------------ITSIDNLS--------SKMLAKFKQVHKEVLNCGVAHVALLTKVDDCS 364
Query: 277 VVVVTHGDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESS-------------DPENEL 323
++ + L+L +R T +++ + ++ DIP SS DP N++
Sbjct: 365 EIL--QDNFLNL---SRSMTSQRQVINV---HKMLDIPISSILMVGNYASDLELDPMNDI 416
Query: 324 IIVDMLRYCLEHAD 337
+I+ LR L AD
Sbjct: 417 LILSALRQMLRAAD 430
>gi|126438323|ref|YP_001074014.1| ABC transporter-like protein [Mycobacterium sp. JLS]
gi|126238123|gb|ABO01524.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium sp. JLS]
Length = 247
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
D DVP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 30 DIDVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 64
>gi|402855039|ref|XP_003892154.1| PREDICTED: interferon-induced protein 44-like [Papio anubis]
Length = 297
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 121/300 (40%), Gaps = 71/300 (23%)
Query: 70 RIGSLTDAKNKILS----YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNR 125
RI + +NK+L+ Y P A D+ +LL+GP GSGKSS N
Sbjct: 15 RIMKAREHRNKLLADIRAYKPYA-------------DLVSEIRILLVGPVGSGKSSFFNS 61
Query: 126 ISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGSNS----FSLYDTRSLSD 177
+ VF VT + VG T + E Y++ G N F L DT L
Sbjct: 62 VKSVFH--------GHVTGQAIVGSDTTSITERYRIYSVKDGKNGKSLPFMLCDTMGLDG 113
Query: 178 DASDNINMIKL-WIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFV 236
+ M + +I++G I + R + + PS+ +++ V +V
Sbjct: 114 AEGAGLCMDDIPYILKG------CIPDRYQFNPRKPITPEHSTFITSPSLKDRIHCVAYV 167
Query: 237 VDGLAVLKSMEG-DSDVEKQYNQIVATTFNC-----PYLSFRDDKPVVVVTHGDLLSLTD 290
+D + S++ S + ++ Q+ NC L+ DD ++ + L+L+
Sbjct: 168 LD----ITSIDNLSSKMLAKFKQVHKEVLNCGVAHVALLTKVDDCSEIL--QDNFLNLS- 220
Query: 291 RARIRTYLGELLGIPPAKQIFDIPESS-------------DPENELIIVDMLRYCLEHAD 337
R T +++ + ++ DIP SS DP N+++I+ LR L AD
Sbjct: 221 --RSMTSQRQVINV---HKMLDIPISSILMVGNYASDLELDPMNDILILSALRQMLRAAD 275
>gi|120406978|ref|YP_956807.1| ABC transporter--like protein [Mycobacterium vanbaalenii PYR-1]
gi|119959796|gb|ABM16801.1| amino acid ABC transporter ATP-binding protein, PAAT family
[Mycobacterium vanbaalenii PYR-1]
Length = 243
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 132
SLT AK+ LS+ A + V D DV +S +IGP GSGKS+L+ +++++E
Sbjct: 6 SLT-AKDIHLSFGKSAVLRGV------DLDVAAGSSTAVIGPSGSGKSTLLRTLNRLYEP 58
Query: 133 DKFASERAQVTYN--SSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWI 190
D R + + S +GD L++ I F L+ R++ D+ + + KL
Sbjct: 59 D-----RGDILLDGRSVLGDNPDQLRQR-IGMVFQHFQLFPHRTVLDNVT--LAPRKLKR 110
Query: 191 MEGVRHGELVIRRSDSSSLRNR 212
+ G EL + + D LRN+
Sbjct: 111 LSGDEARELGMAQLDRVGLRNK 132
>gi|448736410|ref|ZP_21718530.1| phosphate ABC transporter ATP-binding protein [Halococcus
thailandensis JCM 13552]
gi|445806160|gb|EMA56322.1| phosphate ABC transporter ATP-binding protein [Halococcus
thailandensis JCM 13552]
Length = 304
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 99/253 (39%), Gaps = 51/253 (20%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS--VGD------- 150
+ D+P+ + LIGP G GKS+ + ++++ + K A V +S GD
Sbjct: 65 ELDIPEESVTALIGPSGCGKSTFLRCLNRMNDRIKAARVEGSVALDSQEIYGDDVDLVEL 124
Query: 151 ----GTYFLQEYTIPR--------GSNSFSLYDT----RSLSDDASDNINMIKLWIMEGV 194
G F Q P+ GS +T R DDA D +++ + +
Sbjct: 125 RKRVGMVFQQPNPFPKSIRKNVSYGSRKHGDVETGLLARLFGDDAGDEDALVERALRQAA 184
Query: 195 RHGELVIRRSDS----SSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 250
E+ R D+ S + + C A + +P VI ++ +D +A K
Sbjct: 185 LWDEVDDRLGDNALGLSGGQQQRLCIARCLAVDPEVIL-MDEPASALDPIATAK------ 237
Query: 251 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHG--DLLSLTDRARIRTYLGELLGIPPAK 308
+E ++ DD VVVVTH ++D+ + GEL+
Sbjct: 238 -IEDLIEELA------------DDYTVVVVTHNMQQAARISDQTAVFLTGGELVEYGDTN 284
Query: 309 QIFDIPESSDPEN 321
+IF+ PES E+
Sbjct: 285 EIFENPESQRVED 297
>gi|302185947|ref|ZP_07262620.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
syringae 642]
Length = 640
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ LS+ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLSEFGGDISQFKVVKLY 196
>gi|384942492|gb|AFI34851.1| interferon-induced protein 44-like [Macaca mulatta]
Length = 452
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 59/294 (20%)
Query: 70 RIGSLTDAKNKILS----YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNR 125
RI + +NK+L+ Y P A D+ +LL+GP GSGKSS N
Sbjct: 170 RIMKAREHRNKLLADIRAYKPYA-------------DLVSEIRILLVGPVGSGKSSFFNS 216
Query: 126 ISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGSNS----FSLYDTRSLSD 177
+ VF VT + VG T + E Y++ G N F L DT L
Sbjct: 217 VKSVFH--------GHVTGQAIVGSDTTSITERYRIYSVKDGKNGKSLPFILCDTMGLDG 268
Query: 178 DASDNINMIKL-WIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFV 236
+ M + +I++G I + R + + PS+ +++ V +V
Sbjct: 269 AEGAGLCMDDIPYILKG------CIPDRYQFNPRKPITPEHSTFITSPSLKDRIHCVAYV 322
Query: 237 VDGLAVLKSMEG-DSDVEKQYNQIVATTFNC-----PYLSFRDDKPVVVVTHGDLLSLT- 289
+D + S++ S + ++ Q+ NC L+ DD ++ + L+L+
Sbjct: 323 LD----INSIDNLSSKMLAKFKQVHKEVLNCGVAHVALLTKVDDCSEIL--QDNFLNLSR 376
Query: 290 --DRARIRTYLGELLGIPPAKQIFDIPESS----DPENELIIVDMLRYCLEHAD 337
R + ++LG+P + + +S DP N+++I+ LR L AD
Sbjct: 377 SMTSQRQVMNVHKMLGVPISSILMVGNYASDLELDPMNDILILSALRQMLRAAD 430
>gi|302670549|ref|YP_003830509.1| ABC transporter ATP-binding protein/permease [Butyrivibrio
proteoclasticus B316]
gi|302395022|gb|ADL33927.1| ABC transporter ATP-binding/permease protein [Butyrivibrio
proteoclasticus B316]
Length = 604
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 13/70 (18%)
Query: 97 TLSDYD--VPKTTSLLLIGPKGSGKSSLVNRISKVFENDKF--------ASERAQVTYNS 146
L+D++ VP+ T++ ++G G+GKS+LVN + + F+ K A+ER+Q+ +S
Sbjct: 373 VLTDFNLKVPQGTNVAIVGETGAGKSTLVNLVCRFFKPTKGQVLIDGRDAAERSQLWLHS 432
Query: 147 SVGDGTYFLQ 156
++G Y LQ
Sbjct: 433 NIG---YVLQ 439
>gi|371670945|ref|YP_004956901.1| unnamed protein product [Campylobacter phage CPX]
gi|343178475|emb|CBZ42306.1| hypothetical protein [Campylobacter phage CP81]
gi|356649789|gb|AET34332.1| putative helicase [Campylobacter phage CPX]
Length = 787
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 60 VLQSYDQLRTRIGS--LTDAKNKI----LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIG 113
+LQ Y L+T+ G L + ++KI L YTP ++ L + D+P T + +
Sbjct: 256 ILQEY--LKTKDGKAFLQERQSKIILSSLKYTPDI---HINQKFLKNVDIPDTRVVCVKS 310
Query: 114 PKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGT-YFLQEYTIPRGSN 165
P GSGKS+++N+ K F S R + + S+ G Y+L++ I G N
Sbjct: 311 PMGSGKSNIINQYIKNKSKVLFISVRQTLAKDISLKYGCKYYLEDKKILYGEN 363
>gi|301632444|ref|XP_002945295.1| PREDICTED: phosphate import ATP-binding protein pstB-like [Xenopus
(Silurana) tropicalis]
Length = 259
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 21/230 (9%)
Query: 102 DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFL---QEY 158
DVP+ IGP G GKS+L+ +++FE + +RA+ + DG L Q+
Sbjct: 34 DVPEHKVTAFIGPSGCGKSTLLRTFNRMFE--LYPEQRAE---GQILLDGENLLQSKQDV 88
Query: 159 TIPRGSNSFSLYDTRSLSDDASDNINM-IKLWI-MEGVRHGELVIRRSDSSSLRNRMRCK 216
+ R DNI +KL+ + E V ++L N ++ K
Sbjct: 89 ALIRAKVGMVFQKPTPFPMSIYDNIAFGVKLFENLNATDMDERVEWALKKAALWNEVKDK 148
Query: 217 AHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKP 276
H+ G S ++ I G+AVL + + + I ++D
Sbjct: 149 LHQSGSGLSGGQQQRLCI--ARGIAVLPEVLLLDEPCSALDPISTAKIEELIAELKNDYT 206
Query: 277 VVVVTHGDLLSLTDRARIR-----TYLGELLGIPPAKQIFDIPESSDPEN 321
VV+VTH ++ AR YLG+L+ +Q+F P+ + E+
Sbjct: 207 VVIVTH----NMQQAARCSDYTAYMYLGDLVEFGATEQMFFKPQRKETED 252
>gi|73541335|ref|YP_295855.1| ABC transporter [Ralstonia eutropha JMP134]
gi|72118748|gb|AAZ61011.1| ABC transporter related protein [Ralstonia eutropha JMP134]
Length = 570
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 21/85 (24%)
Query: 65 DQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLS---------DYD----------VPK 105
D+L T SL A ++L PG I++ G TLS DYD V K
Sbjct: 325 DRLATFASSL--AHTRVLRRKPGGRIDHQRGDTLSLEHLTLHTPDYDRTLLKDLNVTVGK 382
Query: 106 TTSLLLIGPKGSGKSSLVNRISKVF 130
SLL+IGP G GKSSL+ IS ++
Sbjct: 383 GQSLLIIGPSGGGKSSLMRAISGLW 407
>gi|303281168|ref|XP_003059876.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226458531|gb|EEH55828.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 540
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN---DKFASERAQVTYNSSVGDGTYFLQ 156
DY++PK S+L++GP G+GK+SL+ ++ ++E + S A + N +G YF+
Sbjct: 336 DYELPKRGSVLVMGPSGAGKTSLLRAVAGLWEQGDGEATTSTAASIAEN----NGMYFVP 391
Query: 157 E 157
+
Sbjct: 392 Q 392
>gi|427725349|ref|YP_007072626.1| neutral amino acid ABC transporter ATP-binding protein
[Leptolyngbya sp. PCC 7376]
gi|427357069|gb|AFY39792.1| neutral amino acid ABC transporter ATP-binding protein
[Leptolyngbya sp. PCC 7376]
Length = 255
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 102 DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK----FASERAQVTYNSSVGDGTYFLQE 157
DVP+ LIGP G+GK++L N +S + D+ F + Q + + F++
Sbjct: 29 DVPQGNITGLIGPNGAGKTTLFNLLSNFIQPDEGKVIFDGQEVQHLPSHEIAL-KGFVRT 87
Query: 158 YTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEG 193
+ + R + S+ + L+ N++K+W +G
Sbjct: 88 FQVARVLSRLSVLENMLLAAQHQTGENILKVWFQQG 123
>gi|322435027|ref|YP_004217239.1| ABC transporter [Granulicella tundricola MP5ACTX9]
gi|321162754|gb|ADW68459.1| ABC transporter related protein [Granulicella tundricola MP5ACTX9]
Length = 582
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 78 KNKILSYTPGA-WIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 132
+N +Y PG + N+ + +P TSL ++GP GSGKS+LVN I +++++
Sbjct: 340 RNLNFAYNPGTPVLHNI------NLRIPAGTSLAIVGPTGSGKSTLVNLIPRLYDS 389
>gi|335424086|ref|ZP_08553102.1| CbbX protein [Salinisphaera shabanensis E1L3A]
gi|335424426|ref|ZP_08553435.1| CbbX protein [Salinisphaera shabanensis E1L3A]
gi|334889111|gb|EGM27403.1| CbbX protein [Salinisphaera shabanensis E1L3A]
gi|334890374|gb|EGM28644.1| CbbX protein [Salinisphaera shabanensis E1L3A]
Length = 313
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 32 MNSGDDEGSRDSWDSLVDQRR--RDAVFRE--VLQSYDQLRTRIGSLTDAKNKILSYTPG 87
M+S +D R+ + L D R DAVF E + + +DQL + LT K +I
Sbjct: 1 MSSAEDTTDRNKTEPLADDARVDLDAVFEESQIQEVFDQLDRDLVGLTPVKTRIREIAAL 60
Query: 88 AWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS 147
+++V D P T + G G+GK+++ R++++ ++ E V+
Sbjct: 61 LLVDHVRRQFDLASDTP-TLHMCFTGNPGTGKTTVAERMAQILHKLEYVREGHLVSVTRD 119
Query: 148 VGDGTYFLQEYTIPRGS--------------NSFSLYDTRSLSDDASDNINMIKLWIMEG 193
G Y +T P+ ++ LY + D ++I ++ L +ME
Sbjct: 120 DLVGQYI--GHTAPKTKEVIKRAMGGVLFIDEAYYLYRPENERDYGQESIEIL-LQVMEN 176
Query: 194 VRHGELVI 201
R +VI
Sbjct: 177 QRDDLVVI 184
>gi|380793951|gb|AFE68851.1| interferon-induced protein 44-like, partial [Macaca mulatta]
Length = 332
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 120/294 (40%), Gaps = 59/294 (20%)
Query: 70 RIGSLTDAKNKILS----YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNR 125
RI + +NK+L+ Y P A D+ +LL+GP GSGKSS N
Sbjct: 50 RIMKAREHRNKLLADIRAYKPYA-------------DLVSEIRILLVGPVGSGKSSFFNS 96
Query: 126 ISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGSNS----FSLYDTRSLSD 177
+ VF VT + VG T + E Y++ G N F L DT L
Sbjct: 97 VKSVFH--------GHVTGQAIVGSDTTSITEWYRIYSVKDGKNGKSLPFILCDTMGLDG 148
Query: 178 DASDNINMIKL-WIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFV 236
+ M + +I++G I + R + + PS+ +++ V +V
Sbjct: 149 AEGAGLCMDDIPYILKG------CIPDRYQFNPRKPITPEHSTFITSPSLKDRIHCVAYV 202
Query: 237 VDGLAVLKSMEG-DSDVEKQYNQIVATTFNC-----PYLSFRDDKPVVVVTHGDLLSLT- 289
+D + S++ S + ++ Q+ NC L+ DD ++ + L+L+
Sbjct: 203 LD----INSIDNLSSKMLAKFKQVHKEVLNCGVAHVALLTKVDDCSEIL--QDNFLNLSR 256
Query: 290 --DRARIRTYLGELLGIPPAKQIFDIPESS----DPENELIIVDMLRYCLEHAD 337
R + ++LG+P + + +S DP N+++I+ LR L AD
Sbjct: 257 SMTSQRQVMNVHKMLGVPISSILMVGNYASDLELDPMNDILILSALRQMLRAAD 310
>gi|325954670|ref|YP_004238330.1| iron-chelate-transporting ATPase [Weeksella virosa DSM 16922]
gi|323437288|gb|ADX67752.1| Iron-chelate-transporting ATPase [Weeksella virosa DSM 16922]
Length = 253
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 101 YDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
+D+PK LIGP G+GKS+L++ IS++ E DK
Sbjct: 22 FDIPKNQITSLIGPNGAGKSTLLSIISRLIEKDK 55
>gi|296126035|ref|YP_003633287.1| ABC transporter [Brachyspira murdochii DSM 12563]
gi|296017851|gb|ADG71088.1| ABC transporter related protein [Brachyspira murdochii DSM 12563]
Length = 230
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG---DGTYFLQ 156
D+D+ K L+GP GSGK++L+N + + + DK + Y +G T F +
Sbjct: 24 DFDINKGEVTALVGPNGSGKTTLINILLGILKADKGKLKINIDNYKKHIGVQLQSTPFFE 83
Query: 157 EYTIPRGSNSFS-LYDTRSLSDDASDNIN 184
YT+ FS LYD + ++ ++ +N
Sbjct: 84 GYTVRDNILMFSALYDIKITDEEINNMLN 112
>gi|422340686|ref|ZP_16421627.1| ABC transporter [Treponema denticola F0402]
gi|325475414|gb|EGC78596.1| ABC transporter [Treponema denticola F0402]
Length = 588
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|449127058|ref|ZP_21763332.1| hypothetical protein HMPREF9733_00735 [Treponema denticola SP33]
gi|448944726|gb|EMB25603.1| hypothetical protein HMPREF9733_00735 [Treponema denticola SP33]
Length = 586
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|410493086|ref|YP_006908152.1| putative DEAD/DEAH box helicase [Campylobacter phage CP30A]
gi|404057145|gb|AFR52402.1| putative DEAD/DEAH box helicase [Campylobacter phage CP30A]
Length = 787
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 60 VLQSYDQLRTRIGS--LTDAKNKI----LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIG 113
+LQ Y L+T+ G L + ++KI L YTP ++ + + D+P T + +
Sbjct: 256 ILQEY--LKTKDGKAFLQERQSKIILSSLKYTPDM---HINQKFIKNIDIPNTRVVCVKS 310
Query: 114 PKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGT-YFLQEYTIPRGSN 165
P GSGKS+++N+ K F S R + + S+ G Y+L++ I G N
Sbjct: 311 PMGSGKSNIINQYIKNKSKVLFISVRQTLAKDISLKYGCKYYLEDKKILYGEN 363
>gi|357020456|ref|ZP_09082687.1| ABC transporter-like protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356478204|gb|EHI11341.1| ABC transporter-like protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 245
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 82 LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
L++ P + V D +VP T+ +IGP GSGKS+L+ +++++E D+
Sbjct: 16 LAFGPNKVLRGV------DLEVPAGTTAAVIGPSGSGKSTLLRTLNRLYEPDR 62
>gi|449103732|ref|ZP_21740475.1| hypothetical protein HMPREF9730_01372 [Treponema denticola AL-2]
gi|448964185|gb|EMB44857.1| hypothetical protein HMPREF9730_01372 [Treponema denticola AL-2]
Length = 588
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|449130104|ref|ZP_21766330.1| hypothetical protein HMPREF9724_00995 [Treponema denticola SP37]
gi|448943850|gb|EMB24733.1| hypothetical protein HMPREF9724_00995 [Treponema denticola SP37]
Length = 588
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|449125087|ref|ZP_21761403.1| hypothetical protein HMPREF9723_01447 [Treponema denticola OTK]
gi|448940271|gb|EMB21180.1| hypothetical protein HMPREF9723_01447 [Treponema denticola OTK]
Length = 588
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
+D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 359 ADFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|359785200|ref|ZP_09288355.1| PrkA family serine protein kinase [Halomonas sp. GFAJ-1]
gi|359297498|gb|EHK61731.1| PrkA family serine protein kinase [Halomonas sp. GFAJ-1]
Length = 640
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIP 161
L L+GP G GKSSL R+ + E F + + Y S +G DG QEY IP
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKDSPVYESPLGLFSPEEDGELLEQEYGIP 164
>gi|374703440|ref|ZP_09710310.1| PrkA family serine protein kinase [Pseudomonas sp. S9]
Length = 640
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ + E F + + + S +G DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKHLMEKVPFYAIKDSPVFESPLGLFSDAEDGAILEEEY 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR ++ S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNSIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|320527754|ref|ZP_08028924.1| ABC transporter, ATP-binding protein [Solobacterium moorei F0204]
gi|320131919|gb|EFW24479.1| ABC transporter, ATP-binding protein [Solobacterium moorei F0204]
Length = 604
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 13/71 (18%)
Query: 96 MTLSDY--DVPKTTSLLLIGPKGSGKSSLVNRISKVFE--------NDKFASERAQVTYN 145
M L ++ DVP T++ ++G G+GKS+LVN + + FE + + ER+Q+ +
Sbjct: 373 MVLENFNLDVPHGTNVAIVGETGAGKSTLVNLVCRFFEPTRGQVLIDGRDVRERSQLWLH 432
Query: 146 SSVGDGTYFLQ 156
S++G Y LQ
Sbjct: 433 SNIG---YVLQ 440
>gi|115386024|ref|XP_001209553.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190551|gb|EAU32251.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 319
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 104 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRG 163
P T++ LL+GP G+GK++L+ + A++++ +T+ S + T+P
Sbjct: 50 PPTSNFLLLGPSGAGKTALLTLLE---SKGSPAAKKSTLTHTSQTSTLSTVRLPPTVPTA 106
Query: 164 SNSFSLYDTRSLSDDASDNI--NMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIG 221
SN + RS++D + +I N +K + + HG+L R S ++ M
Sbjct: 107 SNRY-----RSVNDSSLQDISRNPVKYCVKDTPGHGKL--RESQGTAQLVSMSTTND--- 156
Query: 222 CEPSVIRKVNFVIFVVDGLAV 242
KV V+FVVD A+
Sbjct: 157 ----ARSKVRGVLFVVDTAAL 173
>gi|67588672|ref|XP_665367.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656024|gb|EAL35137.1| hypothetical protein Chro.60157, partial [Cryptosporidium hominis]
Length = 316
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGS 164
K TS+LLIGPK SGK++ +I+K F NDK + +G Q P
Sbjct: 28 KITSVLLIGPKNSGKTTFCLKIAKEFLNDKRYPNNNIYILDCDLG------QPLVSPMSC 81
Query: 165 NSFSLYDTRSLSDDASDNINM 185
+D + + S NIN+
Sbjct: 82 VKLVKWDIKDICIKNSKNINI 102
>gi|28867775|ref|NP_790394.1| hypothetical protein PSPTO_0547 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28851010|gb|AAO54089.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 640
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNASEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|410093041|ref|ZP_11289541.1| PrkA family serine protein kinase [Pseudomonas viridiflava
UASWS0038]
gi|409759574|gb|EKN44785.1| PrkA family serine protein kinase [Pseudomonas viridiflava
UASWS0038]
Length = 640
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNANEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|237803355|ref|ZP_04590940.1| PrkA family serine protein kinase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331025336|gb|EGI05392.1| PrkA family serine protein kinase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 640
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|431800449|ref|YP_007227352.1| PrkA family serine protein kinase [Pseudomonas putida HB3267]
gi|430791214|gb|AGA71409.1| PrkA family serine protein kinase [Pseudomonas putida HB3267]
Length = 640
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +E+
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEEF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L + D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLQEFGGDISKFKVVKLY 196
>gi|15901742|ref|NP_346346.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae
TIGR4]
gi|149012495|ref|ZP_01833526.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP19-BS75]
gi|149021875|ref|ZP_01835862.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP23-BS72]
gi|418103609|ref|ZP_12740680.1| ABC transporter family protein [Streptococcus pneumoniae NP070]
gi|418131079|ref|ZP_12767961.1| ABC transporter family protein [Streptococcus pneumoniae GA07643]
gi|418187909|ref|ZP_12824430.1| ABC transporter family protein [Streptococcus pneumoniae GA47360]
gi|418230706|ref|ZP_12857304.1| ABC transporter family protein [Streptococcus pneumoniae EU-NP01]
gi|419476253|ref|ZP_14016087.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA14688]
gi|419478566|ref|ZP_14018388.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA18068]
gi|419487395|ref|ZP_14027156.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA44128]
gi|421242401|ref|ZP_15698926.1| ABC transporter family protein [Streptococcus pneumoniae 2081074]
gi|421246171|ref|ZP_15702662.1| ABC transporter family protein [Streptococcus pneumoniae 2082170]
gi|421271348|ref|ZP_15722200.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
SPAR48]
gi|14973421|gb|AAK75986.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
TIGR4]
gi|147763551|gb|EDK70487.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP19-BS75]
gi|147929913|gb|EDK80901.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP23-BS72]
gi|353774388|gb|EHD54879.1| ABC transporter family protein [Streptococcus pneumoniae NP070]
gi|353801305|gb|EHD81609.1| ABC transporter family protein [Streptococcus pneumoniae GA07643]
gi|353848790|gb|EHE28801.1| ABC transporter family protein [Streptococcus pneumoniae GA47360]
gi|353884828|gb|EHE64621.1| ABC transporter family protein [Streptococcus pneumoniae EU-NP01]
gi|379557833|gb|EHZ22871.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA14688]
gi|379563844|gb|EHZ28842.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA18068]
gi|379585031|gb|EHZ49892.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA44128]
gi|395611532|gb|EJG71604.1| ABC transporter family protein [Streptococcus pneumoniae 2081074]
gi|395616290|gb|EJG76301.1| ABC transporter family protein [Streptococcus pneumoniae 2082170]
gi|395866098|gb|EJG77230.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
SPAR48]
Length = 343
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|354468072|ref|XP_003496491.1| PREDICTED: interferon-induced protein 44-like [Cricetulus griseus]
Length = 430
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 21/118 (17%)
Query: 88 AWIENVGGMTLSDY----DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVT 143
A I+N TL Y D+ +LL+GP G+GKSS VN + VF R +T
Sbjct: 163 AVIQNNLLQTLRTYKPYGDLVPQARILLLGPTGAGKSSFVNSVKSVF--------RGSIT 214
Query: 144 YNSSVG---DGTY-FLQEYTIPRGSNSFS----LYDTRSLSDDASDNINMIKLWIMEG 193
+ + VG +G + Y + GS+ F L D+ LS A +++ I +I++G
Sbjct: 215 HQALVGCDVNGVSDKFRTYPVTYGSDGFPLPFVLCDSMGLSQKAGLHVDDID-FILKG 271
>gi|422591075|ref|ZP_16665724.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330878400|gb|EGH12549.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 640
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|111657343|ref|ZP_01408102.1| hypothetical protein SpneT_02001446 [Streptococcus pneumoniae
TIGR4]
Length = 343
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|422629411|ref|ZP_16694615.1| PrkA family serine protein kinase [Pseudomonas syringae pv. pisi
str. 1704B]
gi|422668604|ref|ZP_16728459.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|424068230|ref|ZP_17805686.1| hypothetical protein Pav013_2850 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|424074239|ref|ZP_17811649.1| hypothetical protein Pav037_4368 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|330938467|gb|EGH42072.1| PrkA family serine protein kinase [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330980968|gb|EGH79071.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|407994744|gb|EKG35303.1| hypothetical protein Pav037_4368 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407998612|gb|EKG39016.1| hypothetical protein Pav013_2850 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 640
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|385332696|ref|YP_005886647.1| ABC transporter ATP-binding protein [Marinobacter adhaerens HP15]
gi|311695846|gb|ADP98719.1| ATP-binding component of ABC transporter [Marinobacter adhaerens
HP15]
Length = 372
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 39/243 (16%)
Query: 86 PGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYN 145
PG E + G+ D D+ L+L+GP G GKS+L+N I+ + +T
Sbjct: 14 PGVAEETLKGI---DIDIASGEFLILVGPSGCGKSTLMNTIAGL----------ETITDG 60
Query: 146 SSVGDG----TYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVI 201
S V DG T ++ I S++LY T S+ ++ + + + L E + E V
Sbjct: 61 SIVLDGKDISTMEPKDRDIAMVFQSYALYPTMSVRENIAFGLKIRGLPKHEIDQEVERVA 120
Query: 202 RRSDSSSLRNRMRC-----KAHKIGCEPSVIRKVNFVIF--VVDGLAVLKSMEGDSDVEK 254
S L N+ + ++ ++ R+ +F + L +E ++++K
Sbjct: 121 DLLQISPLMNKKPANLSGGQQQRVAMGRALARRPRIYLFDEPLSNLDAKLRVEMRTEIKK 180
Query: 255 QYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARIRTYL-GELLGIPPAKQIFDI 313
+ ++ T +V VTH + ++T RI GEL + K+++D
Sbjct: 181 LHQRLKTT--------------IVYVTHDQIEAMTLADRIAVLKDGELQQLGTPKEVYDR 226
Query: 314 PES 316
PE+
Sbjct: 227 PEN 229
>gi|421209684|ref|ZP_15666695.1| ABC transporter family protein [Streptococcus pneumoniae 2070005]
gi|421225760|ref|ZP_15682496.1| ABC transporter family protein [Streptococcus pneumoniae 2070768]
gi|395572339|gb|EJG32936.1| ABC transporter family protein [Streptococcus pneumoniae 2070005]
gi|395588453|gb|EJG48782.1| ABC transporter family protein [Streptococcus pneumoniae 2070768]
Length = 343
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|146309031|ref|YP_001189496.1| putative serine protein kinase PrkA [Pseudomonas mendocina ymp]
gi|421505667|ref|ZP_15952602.1| PrkA family serine protein kinase [Pseudomonas mendocina DLHK]
gi|145577232|gb|ABP86764.1| putative serine protein kinase, PrkA [Pseudomonas mendocina ymp]
gi|400343364|gb|EJO91739.1| PrkA family serine protein kinase [Pseudomonas mendocina DLHK]
Length = 640
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNAAEDGAILEEDY 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR ++ S + T+ L + D ++KL+
Sbjct: 162 GIPRRYLNSIMSPWATKRLQEFGGDISQFRVVKLY 196
>gi|443641945|ref|ZP_21125795.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
syringae B64]
gi|443281962|gb|ELS40967.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
syringae B64]
Length = 640
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|66047858|ref|YP_237699.1| PrkA serine kinase [Pseudomonas syringae pv. syringae B728a]
gi|289676159|ref|ZP_06497049.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
syringae FF5]
gi|422618515|ref|ZP_16687212.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
japonica str. M301072]
gi|422673111|ref|ZP_16732472.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aceris
str. M302273]
gi|440721012|ref|ZP_20901422.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP34876]
gi|440727213|ref|ZP_20907452.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP34881]
gi|63258565|gb|AAY39661.1| PrkA serine kinase [Pseudomonas syringae pv. syringae B728a]
gi|330898892|gb|EGH30311.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
japonica str. M301072]
gi|330970846|gb|EGH70912.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aceris
str. M302273]
gi|440364407|gb|ELQ01539.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP34881]
gi|440364785|gb|ELQ01907.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP34876]
Length = 640
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|422647524|ref|ZP_16710652.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330961066|gb|EGH61326.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 640
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNASEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|418185673|ref|ZP_12822211.1| ABC transporter family protein [Streptococcus pneumoniae GA47283]
gi|419511168|ref|ZP_14050808.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
NP141]
gi|419531006|ref|ZP_14070531.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40028]
gi|421213851|ref|ZP_15670804.1| ABC transporter family protein [Streptococcus pneumoniae 2070108]
gi|421215992|ref|ZP_15672912.1| ABC transporter family protein [Streptococcus pneumoniae 2070109]
gi|353847577|gb|EHE27598.1| ABC transporter family protein [Streptococcus pneumoniae GA47283]
gi|379570801|gb|EHZ35761.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40028]
gi|379630623|gb|EHZ95205.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
NP141]
gi|395578564|gb|EJG39079.1| ABC transporter family protein [Streptococcus pneumoniae 2070108]
gi|395579372|gb|EJG39872.1| ABC transporter family protein [Streptococcus pneumoniae 2070109]
Length = 343
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|213967679|ref|ZP_03395826.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301382739|ref|ZP_07231157.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
tomato Max13]
gi|302063466|ref|ZP_07255007.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
tomato K40]
gi|302130718|ref|ZP_07256708.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|422296563|ref|ZP_16384230.1| hypothetical protein Pav631_0511 [Pseudomonas avellanae BPIC 631]
gi|422659012|ref|ZP_16721442.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|213927455|gb|EEB61003.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|331017635|gb|EGH97691.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|407992247|gb|EKG33920.1| hypothetical protein Pav631_0511 [Pseudomonas avellanae BPIC 631]
Length = 640
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNASEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|422642718|ref|ZP_16706134.1| PrkA family serine protein kinase [Pseudomonas syringae Cit 7]
gi|440744088|ref|ZP_20923394.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP39023]
gi|330955098|gb|EGH55358.1| PrkA family serine protein kinase [Pseudomonas syringae Cit 7]
gi|440374544|gb|ELQ11272.1| PrkA family serine protein kinase [Pseudomonas syringae BRIP39023]
Length = 640
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|94968542|ref|YP_590590.1| ABC transporter ATPase [Candidatus Koribacter versatilis Ellin345]
gi|94550592|gb|ABF40516.1| ABC transporter, ATPase subunit [Candidatus Koribacter versatilis
Ellin345]
Length = 591
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 103 VPKTTSLLLIGPKGSGKSSLVNRISKVFE 131
VP TSL ++GP GSGKS+LVN I ++++
Sbjct: 370 VPAGTSLAIVGPTGSGKSTLVNLIPRIYD 398
>gi|418149266|ref|ZP_12786027.1| ABC transporter family protein [Streptococcus pneumoniae GA13856]
gi|353811049|gb|EHD91295.1| ABC transporter family protein [Streptococcus pneumoniae GA13856]
Length = 343
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|418074773|ref|ZP_12712021.1| ABC transporter family protein [Streptococcus pneumoniae GA11184]
gi|418079367|ref|ZP_12716588.1| ABC transporter family protein [Streptococcus pneumoniae 4027-06]
gi|418081567|ref|ZP_12718775.1| ABC transporter family protein [Streptococcus pneumoniae 6735-05]
gi|418090296|ref|ZP_12727448.1| ABC transporter family protein [Streptococcus pneumoniae GA43265]
gi|418099261|ref|ZP_12736356.1| ABC transporter family protein [Streptococcus pneumoniae 6901-05]
gi|418106060|ref|ZP_12743114.1| ABC transporter family protein [Streptococcus pneumoniae GA44500]
gi|418115449|ref|ZP_12752434.1| ABC transporter family protein [Streptococcus pneumoniae 5787-06]
gi|418117609|ref|ZP_12754577.1| ABC transporter family protein [Streptococcus pneumoniae 6963-05]
gi|418135707|ref|ZP_12772559.1| ABC transporter family protein [Streptococcus pneumoniae GA11426]
gi|418174346|ref|ZP_12810956.1| ABC transporter family protein [Streptococcus pneumoniae GA41277]
gi|418217381|ref|ZP_12844059.1| ABC transporter family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|419432320|ref|ZP_13972449.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
EU-NP05]
gi|419434551|ref|ZP_13974667.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40183]
gi|419441123|ref|ZP_13981165.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40410]
gi|419465368|ref|ZP_14005258.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA04175]
gi|419469734|ref|ZP_14009600.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA06083]
gi|419498301|ref|ZP_14038006.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47522]
gi|419535415|ref|ZP_14074912.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA17457]
gi|421281922|ref|ZP_15732717.1| ABC transporter family protein [Streptococcus pneumoniae GA04672]
gi|421310334|ref|ZP_15760958.1| ABC transporter family protein [Streptococcus pneumoniae GA62681]
gi|353745889|gb|EHD26554.1| ABC transporter family protein [Streptococcus pneumoniae GA11184]
gi|353745987|gb|EHD26651.1| ABC transporter family protein [Streptococcus pneumoniae 4027-06]
gi|353750693|gb|EHD31330.1| ABC transporter family protein [Streptococcus pneumoniae 6735-05]
gi|353760217|gb|EHD40795.1| ABC transporter family protein [Streptococcus pneumoniae GA43265]
gi|353768031|gb|EHD48557.1| ABC transporter family protein [Streptococcus pneumoniae 6901-05]
gi|353774932|gb|EHD55416.1| ABC transporter family protein [Streptococcus pneumoniae GA44500]
gi|353783951|gb|EHD64373.1| ABC transporter family protein [Streptococcus pneumoniae 5787-06]
gi|353787724|gb|EHD68125.1| ABC transporter family protein [Streptococcus pneumoniae 6963-05]
gi|353836843|gb|EHE16930.1| ABC transporter family protein [Streptococcus pneumoniae GA41277]
gi|353869869|gb|EHE49748.1| ABC transporter family protein [Streptococcus pneumoniae
Netherlands15B-37]
gi|353900329|gb|EHE75885.1| ABC transporter family protein [Streptococcus pneumoniae GA11426]
gi|379536242|gb|EHZ01432.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA04175]
gi|379543263|gb|EHZ08414.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA06083]
gi|379562616|gb|EHZ27626.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA17457]
gi|379575255|gb|EHZ40188.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40183]
gi|379576408|gb|EHZ41333.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40410]
gi|379598350|gb|EHZ63141.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47522]
gi|379627783|gb|EHZ92392.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
EU-NP05]
gi|395879428|gb|EJG90487.1| ABC transporter family protein [Streptococcus pneumoniae GA04672]
gi|395908519|gb|EJH19397.1| ABC transporter family protein [Streptococcus pneumoniae GA62681]
Length = 343
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|397472584|ref|XP_003807820.1| PREDICTED: interferon-induced protein 44 [Pan paniscus]
Length = 444
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 35/139 (25%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGS 164
+LL+GP G+GKSS N + VF+ VT+ + VG T + E Y+I G
Sbjct: 189 ILLLGPIGAGKSSFFNSVRSVFQ--------GHVTHQALVGTNTTGISEKYRTYSIRDGK 240
Query: 165 NS----FSLYDTRSLSDD----ASDNINMI---------KLWIMEGVR--HGELVIRRSD 205
+ F L D+ LS+ D+I+ I + ME ++ H + + D
Sbjct: 241 DGRYLPFILCDSLGLSEKEGGLCMDDISYILNGNIRDRYQFNPMESIKLNHHDYI----D 296
Query: 206 SSSLRNRMRCKAHKIGCEP 224
S SL++R+ C A P
Sbjct: 297 SPSLKDRIHCVAFVFDASP 315
>gi|419494030|ref|ZP_14033754.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47210]
gi|421290473|ref|ZP_15741222.1| ABC transporter family protein [Streptococcus pneumoniae GA54354]
gi|421305864|ref|ZP_15756517.1| ABC transporter family protein [Streptococcus pneumoniae GA62331]
gi|379592009|gb|EHZ56827.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47210]
gi|395886202|gb|EJG97219.1| ABC transporter family protein [Streptococcus pneumoniae GA54354]
gi|395904293|gb|EJH15210.1| ABC transporter family protein [Streptococcus pneumoniae GA62331]
Length = 343
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|419443393|ref|ZP_13983415.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13224]
gi|379549591|gb|EHZ14697.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13224]
Length = 343
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|405760178|ref|YP_006700774.1| ABC transporter ATP-binding/permease (pseudogene) [Streptococcus
pneumoniae SPNA45]
gi|404277067|emb|CCM07565.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae SPNA45]
Length = 343
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|104779697|ref|YP_606195.1| serine protein kinase [Pseudomonas entomophila L48]
gi|95108684|emb|CAK13378.1| putative serine protein kinase [Pseudomonas entomophila L48]
Length = 640
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMERVPFYAIKGSPVFESPLGLFNATEDGAILEEDY 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|15903776|ref|NP_359326.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae R6]
gi|116516021|ref|YP_817147.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae D39]
gi|421266897|ref|ZP_15717776.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
SPAR27]
gi|15459413|gb|AAL00537.1| ABC transporter ATP-binding protein - unknown substrate, truncation
[Streptococcus pneumoniae R6]
gi|116076597|gb|ABJ54317.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae D39]
gi|395865993|gb|EJG77126.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
SPAR27]
Length = 343
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|418121967|ref|ZP_12758909.1| ABC transporter family protein [Streptococcus pneumoniae GA44194]
gi|353791442|gb|EHD71818.1| ABC transporter family protein [Streptococcus pneumoniae GA44194]
Length = 343
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|182684863|ref|YP_001836610.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae
CGSP14]
gi|303262445|ref|ZP_07348387.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP14-BS292]
gi|303269662|ref|ZP_07355419.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
BS458]
gi|387760023|ref|YP_006067001.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae INV200]
gi|418140272|ref|ZP_12777095.1| ABC transporter family protein [Streptococcus pneumoniae GA13338]
gi|418181280|ref|ZP_12817848.1| ABC transporter family protein [Streptococcus pneumoniae GA41688]
gi|418200996|ref|ZP_12837437.1| ABC transporter family protein [Streptococcus pneumoniae GA47976]
gi|419515422|ref|ZP_14055046.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae England14-9]
gi|419524399|ref|ZP_14063971.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13723]
gi|421296757|ref|ZP_15747463.1| ABC transporter family protein [Streptococcus pneumoniae GA58581]
gi|182630197|gb|ACB91145.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
CGSP14]
gi|301802612|emb|CBW35374.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae INV200]
gi|302636345|gb|EFL66838.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP14-BS292]
gi|302640802|gb|EFL71192.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
BS458]
gi|353842106|gb|EHE22154.1| ABC transporter family protein [Streptococcus pneumoniae GA41688]
gi|353863563|gb|EHE43486.1| ABC transporter family protein [Streptococcus pneumoniae GA47976]
gi|353904522|gb|EHE79990.1| ABC transporter family protein [Streptococcus pneumoniae GA13338]
gi|379555766|gb|EHZ20831.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13723]
gi|379635109|gb|EHZ99669.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae England14-9]
gi|395893743|gb|EJH04726.1| ABC transporter family protein [Streptococcus pneumoniae GA58581]
Length = 343
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|148985500|ref|ZP_01818689.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP3-BS71]
gi|148993209|ref|ZP_01822775.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP9-BS68]
gi|194397740|ref|YP_002038512.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae G54]
gi|225859684|ref|YP_002741194.1| ABC transporter transmembrane region [Streptococcus pneumoniae
70585]
gi|237650948|ref|ZP_04525200.1| ABC transporter, transmembrane region [Streptococcus pneumoniae
CCRI 1974]
gi|237820797|ref|ZP_04596642.1| ABC transporter, transmembrane region [Streptococcus pneumoniae
CCRI 1974M2]
gi|307128119|ref|YP_003880150.1| multidrug resistance protein 3 [Streptococcus pneumoniae 670-6B]
gi|387758106|ref|YP_006065085.1| ABC transporter ATP-binding protein/permease [Streptococcus
pneumoniae OXC141]
gi|417679885|ref|ZP_12329280.1| ABC transporter family protein [Streptococcus pneumoniae GA17570]
gi|418077144|ref|ZP_12714375.1| ABC transporter family protein [Streptococcus pneumoniae GA47502]
gi|418087606|ref|ZP_12724773.1| ABC transporter family protein [Streptococcus pneumoniae GA47033]
gi|418126562|ref|ZP_12763466.1| ABC transporter family protein [Streptococcus pneumoniae GA44511]
gi|418133360|ref|ZP_12770229.1| ABC transporter family protein [Streptococcus pneumoniae GA11304]
gi|418145098|ref|ZP_12781890.1| ABC transporter family protein [Streptococcus pneumoniae GA13494]
gi|418167558|ref|ZP_12804210.1| ABC transporter family protein [Streptococcus pneumoniae GA17971]
gi|418192353|ref|ZP_12828854.1| ABC transporter family protein [Streptococcus pneumoniae GA47388]
gi|418203146|ref|ZP_12839572.1| ABC transporter family protein [Streptococcus pneumoniae GA52306]
gi|418215106|ref|ZP_12841839.1| ABC transporter family protein [Streptococcus pneumoniae GA54644]
gi|418232909|ref|ZP_12859494.1| ABC transporter family protein [Streptococcus pneumoniae GA07228]
gi|418235110|ref|ZP_12861685.1| ABC transporter family protein [Streptococcus pneumoniae GA08780]
gi|418237364|ref|ZP_12863929.1| ABC transporter family protein [Streptococcus pneumoniae GA19690]
gi|419454423|ref|ZP_13994386.1| istB-like ATP binding family protein [Streptococcus pneumoniae
EU-NP04]
gi|419458484|ref|ZP_13998425.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA02254]
gi|419485130|ref|ZP_14024904.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA43257]
gi|419491831|ref|ZP_14031565.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47179]
gi|419509006|ref|ZP_14048656.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA49542]
gi|419533105|ref|ZP_14072619.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47794]
gi|421220994|ref|ZP_15677830.1| ABC transporter family protein [Streptococcus pneumoniae 2070425]
gi|421223243|ref|ZP_15680024.1| ABC transporter family protein [Streptococcus pneumoniae 2070531]
gi|421228209|ref|ZP_15684906.1| ABC transporter family protein [Streptococcus pneumoniae 2072047]
gi|421241370|ref|ZP_15697914.1| ABC transporter family protein [Streptococcus pneumoniae 2080913]
gi|421275617|ref|ZP_15726445.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA52612]
gi|421279686|ref|ZP_15730491.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA17301]
gi|421286221|ref|ZP_15736995.1| ABC transporter family protein [Streptococcus pneumoniae GA60190]
gi|421294950|ref|ZP_15745670.1| ABC transporter family protein [Streptococcus pneumoniae GA56113]
gi|421301755|ref|ZP_15752424.1| ABC transporter family protein [Streptococcus pneumoniae GA19998]
gi|147922220|gb|EDK73341.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP3-BS71]
gi|147928183|gb|EDK79201.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP9-BS68]
gi|194357407|gb|ACF55855.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae G54]
gi|225722041|gb|ACO17895.1| ABC transporter, transmembrane region [Streptococcus pneumoniae
70585]
gi|301800695|emb|CBW33341.1| putative ABC transporter, ATP-binding/permease protein
[Streptococcus pneumoniae OXC141]
gi|306485181|gb|ADM92050.1| multidrug resistance protein 3 [Streptococcus pneumoniae 670-6B]
gi|332072005|gb|EGI82492.1| ABC transporter family protein [Streptococcus pneumoniae GA17570]
gi|353746090|gb|EHD26753.1| ABC transporter family protein [Streptococcus pneumoniae GA47502]
gi|353757007|gb|EHD37604.1| ABC transporter family protein [Streptococcus pneumoniae GA47033]
gi|353795171|gb|EHD75522.1| ABC transporter family protein [Streptococcus pneumoniae GA44511]
gi|353804301|gb|EHD84584.1| ABC transporter family protein [Streptococcus pneumoniae GA11304]
gi|353804813|gb|EHD85092.1| ABC transporter family protein [Streptococcus pneumoniae GA13494]
gi|353828060|gb|EHE08204.1| ABC transporter family protein [Streptococcus pneumoniae GA17971]
gi|353854675|gb|EHE34647.1| ABC transporter family protein [Streptococcus pneumoniae GA47388]
gi|353866150|gb|EHE46053.1| ABC transporter family protein [Streptococcus pneumoniae GA52306]
gi|353868671|gb|EHE48556.1| ABC transporter family protein [Streptococcus pneumoniae GA54644]
gi|353885592|gb|EHE65380.1| ABC transporter family protein [Streptococcus pneumoniae GA07228]
gi|353885826|gb|EHE65611.1| ABC transporter family protein [Streptococcus pneumoniae GA08780]
gi|353891059|gb|EHE70817.1| ABC transporter family protein [Streptococcus pneumoniae GA19690]
gi|379529367|gb|EHY94614.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA02254]
gi|379581050|gb|EHZ45938.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA43257]
gi|379591363|gb|EHZ56188.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47179]
gi|379604849|gb|EHZ69603.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA47794]
gi|379610214|gb|EHZ74946.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA49542]
gi|379630864|gb|EHZ95444.1| istB-like ATP binding family protein [Streptococcus pneumoniae
EU-NP04]
gi|395586238|gb|EJG46614.1| ABC transporter family protein [Streptococcus pneumoniae 2070425]
gi|395586528|gb|EJG46896.1| ABC transporter family protein [Streptococcus pneumoniae 2070531]
gi|395592930|gb|EJG53184.1| ABC transporter family protein [Streptococcus pneumoniae 2072047]
gi|395606648|gb|EJG66751.1| ABC transporter family protein [Streptococcus pneumoniae 2080913]
gi|395872792|gb|EJG83888.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA52612]
gi|395878422|gb|EJG89487.1| istB-like ATP binding family protein [Streptococcus pneumoniae
GA17301]
gi|395885056|gb|EJG96084.1| ABC transporter family protein [Streptococcus pneumoniae GA60190]
gi|395892143|gb|EJH03135.1| ABC transporter family protein [Streptococcus pneumoniae GA56113]
gi|395897890|gb|EJH08843.1| ABC transporter family protein [Streptococcus pneumoniae GA19998]
gi|429320078|emb|CCP33405.1| putative ABC transporter, ATP-binding/permease protein
[Streptococcus pneumoniae SPN034183]
gi|429321896|emb|CCP35379.1| putative ABC transporter, ATP-binding/permease protein
[Streptococcus pneumoniae SPN994039]
gi|429323716|emb|CCP31420.1| putative ABC transporter, ATP-binding/permease protein
[Streptococcus pneumoniae SPN994038]
Length = 343
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|158523236|ref|YP_001531106.1| ABC transporter-like protein [Desulfococcus oleovorans Hxd3]
gi|158512062|gb|ABW69029.1| ABC transporter-related protein [Desulfococcus oleovorans Hxd3]
Length = 579
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 72 GSLTDAKNKILSYTPGAWIENVGGMTLSD--YDVPKTTSLLLIGPKGSGKSSLVNRISKV 129
G +N SY PG G LSD D+P L ++GP GSGK++LV+ ++++
Sbjct: 332 GGALSFRNVSFSYAPG------GKPVLSDIHLDLPAGKILCIVGPPGSGKTTLVHLMARL 385
Query: 130 FEND 133
++ D
Sbjct: 386 YDPD 389
>gi|167031444|ref|YP_001666675.1| putative serine protein kinase PrkA [Pseudomonas putida GB-1]
gi|166857932|gb|ABY96339.1| putative serine protein kinase, PrkA [Pseudomonas putida GB-1]
Length = 640
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +E+
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEEF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L + D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLQEFGGDISKFKVVKLY 196
>gi|448297016|ref|ZP_21487066.1| phosphate ABC transporter ATP-binding protein, partial
[Halalkalicoccus jeotgali B3]
gi|445580693|gb|ELY35071.1| phosphate ABC transporter ATP-binding protein, partial
[Halalkalicoccus jeotgali B3]
Length = 253
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 43/254 (16%)
Query: 103 VPKTTSLLLIGPKGSGKSSL---VNRISKVFENDKFASE---RAQVTYNSSVGD------ 150
+P+ +IGP G GKS+ +NR++ + + + E R + Y+ V
Sbjct: 1 IPEHQVTAIIGPSGCGKSTFLRSINRMNDLIDVARVEGELLFRGKNVYDQDVDSVALRRR 60
Query: 151 -GTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGEL---VIRRSDS 206
G F + P+ Y + ++ +D I ++H L V + DS
Sbjct: 61 IGMVFQKPNPFPKSIRDNVAYGLKVQGEEVTDE------KIERALKHAALWEEVKDKLDS 114
Query: 207 SSL-----RNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVA 261
S L + + C A I +P VI ++ +D +A K + D+ + Y +V
Sbjct: 115 SGLDLSGGQQQRLCIARAIAPDPEVIL-MDEPASALDPVATSKIEDLIEDLARDYT-VVI 172
Query: 262 TTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARI----------RTYL----GELLGIPPA 307
T N + DK V +T G+L+ D ++ +T + GEL+
Sbjct: 173 VTHNMQQAARISDKTAVFLTGGELVEFGDTNKVFENPENQQVDKTAVFLTGGELVEFGDT 232
Query: 308 KQIFDIPESSDPEN 321
++F+ PE+ E+
Sbjct: 233 NKVFENPENQQVED 246
>gi|348669736|gb|EGZ09558.1| hypothetical protein PHYSODRAFT_522513 [Phytophthora sojae]
Length = 1360
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 104 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS 147
P T +L+L G GSGKSS + +S F NDK + QVTYN +
Sbjct: 107 PGTITLVL-GQPGSGKSSFMKLLSSRFPNDKNVTMEGQVTYNGT 149
>gi|387627091|ref|YP_006063267.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae INV104]
gi|417694789|ref|ZP_12343975.1| ABC transporter family protein [Streptococcus pneumoniae GA47901]
gi|444383187|ref|ZP_21181380.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS8106]
gi|444385872|ref|ZP_21183940.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS8203]
gi|301794877|emb|CBW37336.1| putative ABC transporter, ATP-binding/permease protein (pseudogene)
[Streptococcus pneumoniae INV104]
gi|332199942|gb|EGJ14016.1| ABC transporter family protein [Streptococcus pneumoniae GA47901]
gi|444248840|gb|ELU55339.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS8203]
gi|444250211|gb|ELU56693.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS8106]
Length = 343
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|26987139|ref|NP_742564.1| serine protein kinase PrkA [Pseudomonas putida KT2440]
gi|148545683|ref|YP_001265785.1| putative serine protein kinase PrkA [Pseudomonas putida F1]
gi|386010057|ref|YP_005928334.1| hypothetical protein PPUBIRD1_0435 [Pseudomonas putida BIRD-1]
gi|395446777|ref|YP_006387030.1| serine protein kinase, PrkA [Pseudomonas putida ND6]
gi|397694915|ref|YP_006532796.1| hypothetical protein T1E_2156 [Pseudomonas putida DOT-T1E]
gi|421524951|ref|ZP_15971572.1| PrkA family serine protein kinase [Pseudomonas putida LS46]
gi|24981771|gb|AAN66028.1|AE016232_1 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|148509741|gb|ABQ76601.1| putative serine protein kinase, PrkA [Pseudomonas putida F1]
gi|313496763|gb|ADR58129.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
gi|388560774|gb|AFK69915.1| serine protein kinase, PrkA [Pseudomonas putida ND6]
gi|397331645|gb|AFO48004.1| Uncharacterized protein yeaG [Pseudomonas putida DOT-T1E]
gi|402751414|gb|EJX11927.1| PrkA family serine protein kinase [Pseudomonas putida LS46]
Length = 640
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +E+
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEEF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L + D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLQEFGGDISKFKVVKLY 196
>gi|410477270|ref|YP_006744029.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae
gamPNI0373]
gi|444387557|ref|ZP_21185577.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS125219]
gi|444390902|ref|ZP_21188815.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS70012]
gi|444393532|ref|ZP_21191176.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS81218]
gi|444395723|ref|ZP_21193264.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0002]
gi|444398630|ref|ZP_21196110.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0006]
gi|444400718|ref|ZP_21198095.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0007]
gi|444402399|ref|ZP_21199566.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0008]
gi|444406177|ref|ZP_21202968.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0009]
gi|444406765|ref|ZP_21203435.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0010]
gi|444415993|ref|ZP_21212205.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0199]
gi|444417835|ref|ZP_21213840.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0360]
gi|444419380|ref|ZP_21215250.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0427]
gi|406370215|gb|AFS43905.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
gamPNI0373]
gi|444252770|gb|ELU59231.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS125219]
gi|444255060|gb|ELU61416.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS70012]
gi|444257364|gb|ELU63701.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0002]
gi|444258707|gb|ELU65028.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0006]
gi|444258844|gb|ELU65162.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PCS81218]
gi|444265501|gb|ELU71506.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0007]
gi|444266593|gb|ELU72537.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0008]
gi|444269835|gb|ELU75633.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0009]
gi|444272112|gb|ELU77850.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0010]
gi|444278497|gb|ELU83942.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0199]
gi|444282489|gb|ELU87747.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0360]
gi|444286997|gb|ELU91943.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
PNI0427]
Length = 343
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|359395727|ref|ZP_09188779.1| hypothetical protein KUC_2395 [Halomonas boliviensis LC1]
gi|357969992|gb|EHJ92439.1| hypothetical protein KUC_2395 [Halomonas boliviensis LC1]
Length = 640
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 162
L L+GP G GKSSL R+ + E F + + Y S +G DG +EY IP+
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKGSPVYESPLGLFSPEEDGELLEKEYGIPQ 165
>gi|260833102|ref|XP_002611496.1| hypothetical protein BRAFLDRAFT_63869 [Branchiostoma floridae]
gi|229296867|gb|EEN67506.1| hypothetical protein BRAFLDRAFT_63869 [Branchiostoma floridae]
Length = 204
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 111 LIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLY 170
L+GP GSGKSS +N + + + + + G+GT LQE+ + N F L
Sbjct: 47 LLGPIGSGKSSFINTCERALKPE---LRKGTAEIQTGHGEGTIVLQEF-LDDIDNGFRLV 102
Query: 171 DTRSLSDDASDNINMIKLWIMEGVRHGEL 199
DTR L D + I ++ G++
Sbjct: 103 DTRGLFRHNIDEFKALADIIYGRIKPGQM 131
>gi|89094578|ref|ZP_01167516.1| hypothetical protein MED92_01064 [Neptuniibacter caesariensis]
gi|89081177|gb|EAR60411.1| hypothetical protein MED92_01064 [Oceanospirillum sp. MED92]
Length = 640
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 17/129 (13%)
Query: 39 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 98
G + D+ D R+ ++++ Y G + DA I+SY A G+
Sbjct: 47 GEPEMIDTSTDPRQSRIFSNKLIKRYPAFSEFYG-MEDAIENIVSYFKHA----AQGLE- 100
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGT 152
+ L L+GP G GKSSL R+ + E+ F + + + S +G DG
Sbjct: 101 -----ERKQILYLLGPVGGGKSSLAERLKHLMEHIPFFAIKGSPVFESPLGLFKPEEDGD 155
Query: 153 YFLQEYTIP 161
+EY IP
Sbjct: 156 ILREEYGIP 164
>gi|348669739|gb|EGZ09561.1| hypothetical protein PHYSODRAFT_522675 [Phytophthora sojae]
Length = 1360
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 104 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS 147
P T +L+L G GSGKSS + +S F NDK + QVTYN +
Sbjct: 107 PGTITLVL-GQPGSGKSSFMKLLSSRFPNDKNVTMEGQVTYNGT 149
>gi|307068538|ref|YP_003877504.1| multidrug ABC transporter ATPase and permease [Streptococcus
pneumoniae AP200]
gi|306410075|gb|ADM85502.1| ABC-type multidrug transport system, ATPase and permease component
[Streptococcus pneumoniae AP200]
Length = 338
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 78 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATVHAGQKVAIVGPTGTGKTT 137
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 138 IVNLLMKFYEIDK 150
>gi|148990129|ref|ZP_01821369.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP6-BS73]
gi|147924523|gb|EDK75611.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP6-BS73]
Length = 284
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|148998455|ref|ZP_01825896.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP11-BS70]
gi|419471808|ref|ZP_14011666.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA07914]
gi|419504650|ref|ZP_14044316.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47760]
gi|421239249|ref|ZP_15695812.1| ABC transporter family protein [Streptococcus pneumoniae 2071247]
gi|421245808|ref|ZP_15702305.1| ABC transporter family protein [Streptococcus pneumoniae 2081685]
gi|421314784|ref|ZP_15765370.1| ABC transporter family protein [Streptococcus pneumoniae GA47562]
gi|147755648|gb|EDK62694.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae
SP11-BS70]
gi|379544053|gb|EHZ09199.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA07914]
gi|379604752|gb|EHZ69507.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47760]
gi|395600017|gb|EJG60176.1| ABC transporter family protein [Streptococcus pneumoniae 2071247]
gi|395606843|gb|EJG66944.1| ABC transporter family protein [Streptococcus pneumoniae 2081685]
gi|395912412|gb|EJH23271.1| ABC transporter family protein [Streptococcus pneumoniae GA47562]
Length = 343
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATVHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|448538269|ref|ZP_21622775.1| ABC transporter [Halorubrum hochstenium ATCC 700873]
gi|445701351|gb|ELZ53333.1| ABC transporter [Halorubrum hochstenium ATCC 700873]
Length = 262
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 94 GGMTLSD---YDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
GG+T +D +DV + T LIGP G+GKS++ N IS +E D
Sbjct: 23 GGLTATDHATFDVERGTITGLIGPNGAGKSTIFNLISGFYEPD 65
>gi|71734132|ref|YP_272928.1| protein kinase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257483102|ref|ZP_05637143.1| protein kinase [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289627692|ref|ZP_06460646.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289649011|ref|ZP_06480354.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
aesculi str. 2250]
gi|416014376|ref|ZP_11562203.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
glycinea str. B076]
gi|422583659|ref|ZP_16658780.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422595496|ref|ZP_16669783.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422607552|ref|ZP_16679550.1| PrkA family serine protein kinase [Pseudomonas syringae pv. mori
str. 301020]
gi|422682325|ref|ZP_16740591.1| PrkA family serine protein kinase [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|71554685|gb|AAZ33896.1| protein kinase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298160146|gb|EFI01175.1| Serine protein kinase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|320326005|gb|EFW82063.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
glycinea str. B076]
gi|330868487|gb|EGH03196.1| PrkA family serine protein kinase [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330891192|gb|EGH23853.1| PrkA family serine protein kinase [Pseudomonas syringae pv. mori
str. 301020]
gi|330985800|gb|EGH83903.1| PrkA family serine protein kinase [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011665|gb|EGH91721.1| PrkA family serine protein kinase [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 640
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIERVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|352105148|ref|ZP_08960704.1| PrkA family serine protein kinase [Halomonas sp. HAL1]
gi|350598528|gb|EHA14643.1| PrkA family serine protein kinase [Halomonas sp. HAL1]
Length = 640
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 162
L L+GP G GKSSL R+ + E F + + Y S +G DG +EY IP+
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKGSPVYESPLGLFSPEEDGELLEKEYGIPQ 165
>gi|448747388|ref|ZP_21729048.1| Serine-protein kinase, PrkA [Halomonas titanicae BH1]
gi|445565080|gb|ELY21193.1| Serine-protein kinase, PrkA [Halomonas titanicae BH1]
Length = 640
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 162
L L+GP G GKSSL R+ + E F + + Y S +G DG +EY IP+
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKGSPVYESPLGLFSPEEDGELLEKEYGIPQ 165
>gi|332672398|ref|YP_004421642.1| putative DEAD/DEAH box helicase [Campylobacter phage NCTC12673]
gi|327493575|gb|AEA86434.1| putative DEAD/DEAH box helicase [Campylobacter phage NCTC12673]
Length = 787
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 12/113 (10%)
Query: 60 VLQSYDQLRTRIGS--LTDAKNKI----LSYTPGAWIENVGGMTLSDYDVPKTTSLLLIG 113
+LQ Y L+T+ G L + ++KI L YTP ++ + + D+P T + +
Sbjct: 256 ILQEY--LKTKDGKAFLQEKQSKIILSSLKYTPDI---HINQKFIKNIDIPDTRVVCVKS 310
Query: 114 PKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGT-YFLQEYTIPRGSN 165
P GSGKS+++N+ K F S R + + S+ G Y+L++ I G N
Sbjct: 311 PMGSGKSNIINQYIKDKSKILFISVRQTLAKDISLKYGCKYYLEDKKILYGEN 363
>gi|291398641|ref|XP_002715591.1| PREDICTED: interferon-induced protein 44-like [Oryctolagus
cuniculus]
Length = 447
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 52/121 (42%), Gaps = 34/121 (28%)
Query: 70 RIGSLTDAKNKILS----YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNR 125
RI +T +NK+LS Y P A D+ +LL+GP GSGKSS N
Sbjct: 164 RITEVTQYRNKLLSDLRAYKPYA-------------DLVSEIRILLLGPTGSGKSSFFNS 210
Query: 126 ISKVFENDKFASERAQVTYNSSVG-DGTYFLQE----YTIPRGSN----SFSLYDTRSLS 176
+ VF R + T + VG D T + E Y+I G + F L DT L
Sbjct: 211 VKSVF--------RGRPTQQAIVGSDSTTSITEQYRIYSIKDGVHRQYLPFMLCDTMGLH 262
Query: 177 D 177
D
Sbjct: 263 D 263
>gi|15595785|ref|NP_249279.1| hypothetical protein PA0588 [Pseudomonas aeruginosa PAO1]
gi|107099574|ref|ZP_01363492.1| hypothetical protein PaerPA_01000587 [Pseudomonas aeruginosa PACS2]
gi|116054316|ref|YP_788761.1| hypothetical protein PA14_07680 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889329|ref|YP_002438193.1| putative protein kinase [Pseudomonas aeruginosa LESB58]
gi|254237198|ref|ZP_04930521.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254243682|ref|ZP_04937004.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296387094|ref|ZP_06876593.1| putative serine protein kinase, PrkA [Pseudomonas aeruginosa PAb1]
gi|313111767|ref|ZP_07797560.1| hypothetical protein PA39016_004010063 [Pseudomonas aeruginosa
39016]
gi|355647005|ref|ZP_09054758.1| hypothetical protein HMPREF1030_03844 [Pseudomonas sp. 2_1_26]
gi|386056658|ref|YP_005973180.1| protein kinase [Pseudomonas aeruginosa M18]
gi|386068492|ref|YP_005983796.1| hypothetical protein NCGM2_5599 [Pseudomonas aeruginosa NCGM2.S1]
gi|392982001|ref|YP_006480588.1| PrkA family serine protein kinase [Pseudomonas aeruginosa DK2]
gi|416855760|ref|ZP_11911681.1| PrkA family serine protein kinase [Pseudomonas aeruginosa 138244]
gi|416873056|ref|ZP_11917183.1| PrkA family serine protein kinase [Pseudomonas aeruginosa 152504]
gi|418584840|ref|ZP_13148897.1| PrkA family serine protein kinase [Pseudomonas aeruginosa MPAO1/P1]
gi|418590793|ref|ZP_13154698.1| PrkA family serine protein kinase [Pseudomonas aeruginosa MPAO1/P2]
gi|419756070|ref|ZP_14282422.1| PrkA family serine protein kinase [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137183|ref|ZP_14645178.1| hypothetical protein PACIG1_0674 [Pseudomonas aeruginosa CIG1]
gi|421151674|ref|ZP_15611282.1| hypothetical protein PABE171_0624 [Pseudomonas aeruginosa ATCC
14886]
gi|421157628|ref|ZP_15616985.1| hypothetical protein PABE173_0609 [Pseudomonas aeruginosa ATCC
25324]
gi|421165466|ref|ZP_15623794.1| hypothetical protein PABE177_0612 [Pseudomonas aeruginosa ATCC
700888]
gi|421172353|ref|ZP_15630128.1| hypothetical protein PACI27_0606 [Pseudomonas aeruginosa CI27]
gi|421178500|ref|ZP_15636113.1| hypothetical protein PAE2_0559 [Pseudomonas aeruginosa E2]
gi|421515208|ref|ZP_15961894.1| PrkA family serine protein kinase [Pseudomonas aeruginosa PAO579]
gi|424942987|ref|ZP_18358750.1| putative protein kinase [Pseudomonas aeruginosa NCMG1179]
gi|451983554|ref|ZP_21931833.1| Serine protein kinase (prkA protein), P-loop containing
[Pseudomonas aeruginosa 18A]
gi|9946460|gb|AAG03977.1|AE004495_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115589537|gb|ABJ15552.1| putative protein kinase [Pseudomonas aeruginosa UCBPP-PA14]
gi|126169129|gb|EAZ54640.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126197060|gb|EAZ61123.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769552|emb|CAW25312.1| putative protein kinase [Pseudomonas aeruginosa LESB58]
gi|310884062|gb|EFQ42656.1| hypothetical protein PA39016_004010063 [Pseudomonas aeruginosa
39016]
gi|334842658|gb|EGM21261.1| PrkA family serine protein kinase [Pseudomonas aeruginosa 138244]
gi|334845354|gb|EGM23917.1| PrkA family serine protein kinase [Pseudomonas aeruginosa 152504]
gi|346059433|dbj|GAA19316.1| putative protein kinase [Pseudomonas aeruginosa NCMG1179]
gi|347302964|gb|AEO73078.1| putative protein kinase [Pseudomonas aeruginosa M18]
gi|348037051|dbj|BAK92411.1| hypothetical protein NCGM2_5599 [Pseudomonas aeruginosa NCGM2.S1]
gi|354828147|gb|EHF12274.1| hypothetical protein HMPREF1030_03844 [Pseudomonas sp. 2_1_26]
gi|375045172|gb|EHS37758.1| PrkA family serine protein kinase [Pseudomonas aeruginosa MPAO1/P1]
gi|375050339|gb|EHS42821.1| PrkA family serine protein kinase [Pseudomonas aeruginosa MPAO1/P2]
gi|384397732|gb|EIE44143.1| PrkA family serine protein kinase [Pseudomonas aeruginosa
PADK2_CF510]
gi|392317506|gb|AFM62886.1| PrkA family serine protein kinase [Pseudomonas aeruginosa DK2]
gi|403250024|gb|EJY63485.1| hypothetical protein PACIG1_0674 [Pseudomonas aeruginosa CIG1]
gi|404348936|gb|EJZ75273.1| PrkA family serine protein kinase [Pseudomonas aeruginosa PAO579]
gi|404526874|gb|EKA37061.1| hypothetical protein PABE171_0624 [Pseudomonas aeruginosa ATCC
14886]
gi|404537949|gb|EKA47512.1| hypothetical protein PACI27_0606 [Pseudomonas aeruginosa CI27]
gi|404541679|gb|EKA51030.1| hypothetical protein PABE177_0612 [Pseudomonas aeruginosa ATCC
700888]
gi|404548349|gb|EKA57304.1| hypothetical protein PAE2_0559 [Pseudomonas aeruginosa E2]
gi|404550435|gb|EKA59184.1| hypothetical protein PABE173_0609 [Pseudomonas aeruginosa ATCC
25324]
gi|451758793|emb|CCQ84356.1| Serine protein kinase (prkA protein), P-loop containing
[Pseudomonas aeruginosa 18A]
gi|453045970|gb|EME93688.1| PrkA family serine protein kinase [Pseudomonas aeruginosa
PA21_ST175]
Length = 640
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPDEDGAILEEDY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|452876505|ref|ZP_21953856.1| PrkA family serine protein kinase [Pseudomonas aeruginosa VRFPA01]
gi|452186673|gb|EME13691.1| PrkA family serine protein kinase [Pseudomonas aeruginosa VRFPA01]
Length = 640
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPDEDGAILEEDY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|448432392|ref|ZP_21585528.1| ABC transporter [Halorubrum tebenquichense DSM 14210]
gi|445687276|gb|ELZ39568.1| ABC transporter [Halorubrum tebenquichense DSM 14210]
Length = 260
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 94 GGMTLSD---YDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
GG+T +D +DV + T LIGP G+GKS++ N IS +E D
Sbjct: 21 GGLTATDHATFDVERGTITGLIGPNGAGKSTIFNLISGFYEPD 63
>gi|415700527|ref|ZP_11458113.1| ABC transporter family protein [Streptococcus pneumoniae 459-5]
gi|415750212|ref|ZP_11478126.1| ABC transporter family protein [Streptococcus pneumoniae SV35]
gi|415753127|ref|ZP_11480109.1| ABC transporter family protein [Streptococcus pneumoniae SV36]
gi|418124278|ref|ZP_12761207.1| ABC transporter family protein [Streptococcus pneumoniae GA44378]
gi|418128814|ref|ZP_12765705.1| ABC transporter family protein [Streptococcus pneumoniae NP170]
gi|418138023|ref|ZP_12774859.1| ABC transporter family protein [Streptococcus pneumoniae GA11663]
gi|418179049|ref|ZP_12815629.1| ABC transporter family protein [Streptococcus pneumoniae GA41565]
gi|419473996|ref|ZP_14013843.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13430]
gi|421269132|ref|ZP_15719998.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae SPAR95]
gi|353794612|gb|EHD74965.1| ABC transporter family protein [Streptococcus pneumoniae GA44378]
gi|353797688|gb|EHD78020.1| ABC transporter family protein [Streptococcus pneumoniae NP170]
gi|353841363|gb|EHE21419.1| ABC transporter family protein [Streptococcus pneumoniae GA41565]
gi|353900015|gb|EHE75576.1| ABC transporter family protein [Streptococcus pneumoniae GA11663]
gi|379549624|gb|EHZ14728.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae GA13430]
gi|381308774|gb|EIC49617.1| ABC transporter family protein [Streptococcus pneumoniae SV36]
gi|381314060|gb|EIC54836.1| ABC transporter family protein [Streptococcus pneumoniae 459-5]
gi|381316758|gb|EIC57502.1| ABC transporter family protein [Streptococcus pneumoniae SV35]
gi|395866997|gb|EJG78122.1| ftsK/SpoIIIE family protein [Streptococcus pneumoniae SPAR95]
Length = 284
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|152984312|ref|YP_001346126.1| hypothetical protein PSPA7_0731 [Pseudomonas aeruginosa PA7]
gi|150959470|gb|ABR81495.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 640
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPDEDGAILEEDY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|432855025|ref|XP_004068035.1| PREDICTED: interferon-induced protein 44-like [Oryzias latipes]
Length = 444
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFS 168
+LL+GP G+GKSS N +F+ +Q T +S T + YT+ G S
Sbjct: 206 VLLVGPVGAGKSSFFNSFKSIFK----GHITSQATPGTSSTSVTTLFRSYTVTPGREGKS 261
Query: 169 L----YDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEP 224
L DT L + +N+ ++ + +G + R +SS+ ++ +A P
Sbjct: 262 LPLVFCDTMGLEAEVGAGLNIAEI---SNIINGHIPDRYQFNSSV--PLQSEAQTFRKNP 316
Query: 225 SVIRKVNFVIFVVDG 239
+ K++ V +V+D
Sbjct: 317 ELKDKIHCVAYVIDA 331
>gi|325276037|ref|ZP_08141852.1| PrkA family serine protein kinase [Pseudomonas sp. TJI-51]
gi|324098822|gb|EGB96853.1| PrkA family serine protein kinase [Pseudomonas sp. TJI-51]
Length = 640
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +E+
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMERVPFYAIKGSPVFESPLGLFNATEDGAILEEEF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L + D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLQEFGGDISKFKVVKLY 196
>gi|416021886|ref|ZP_11567177.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320332060|gb|EFW87996.1| putative serine protein kinase, PrkA [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 640
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIERVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|449106244|ref|ZP_21742912.1| hypothetical protein HMPREF9729_01177 [Treponema denticola ASLM]
gi|451967956|ref|ZP_21921185.1| hypothetical protein HMPREF9728_00356 [Treponema denticola US-Trep]
gi|448965439|gb|EMB46102.1| hypothetical protein HMPREF9729_01177 [Treponema denticola ASLM]
gi|451703334|gb|EMD57709.1| hypothetical protein HMPREF9728_00356 [Treponema denticola US-Trep]
Length = 588
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
D+ VP+ TS ++GP GSGK++L N I++ ++ D
Sbjct: 360 DFTVPQKTSCAIVGPSGSGKTTLCNLIARFWDVD 393
>gi|378953240|ref|YP_005210728.1| protein PrkA [Pseudomonas fluorescens F113]
gi|359763254|gb|AEV65333.1| PrkA [Pseudomonas fluorescens F113]
Length = 640
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|284165753|ref|YP_003404032.1| phosphate ABC transporter ATPase [Haloterrigena turkmenica DSM
5511]
gi|284015408|gb|ADB61359.1| phosphate ABC transporter, ATPase subunit [Haloterrigena turkmenica
DSM 5511]
Length = 289
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 22/213 (10%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSL---VNRISKVFENDKFASE---RAQVTYNSSVGD--- 150
D ++P+ LIGP G GKS+ +NR++ + + + + R + Y+ V
Sbjct: 63 DMEIPEKQVTALIGPSGCGKSTFLRSINRMNDLIDIARVEGDLYFREKNVYDDDVDPVAL 122
Query: 151 ----GTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDS 206
G F P+ Y R D +N++ +E E V + DS
Sbjct: 123 RRKIGMVFQSPNPFPKSIRDNVAYGLRVQGKD--ENVDEKVRTALERAALLEEVEDQLDS 180
Query: 207 SSL-----RNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVA 261
S L + + C A I +P VI ++ +D +A K + D+ ++Y +V
Sbjct: 181 SGLDLSGGQQQRLCIARAIAPDPEVIL-MDEPASALDPIATSKIEDLIEDLSEEYT-VVI 238
Query: 262 TTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARI 294
T N + DK V +T G+L+ D +I
Sbjct: 239 VTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 271
>gi|421308128|ref|ZP_15758768.1| ABC transporter family protein [Streptococcus pneumoniae GA60132]
gi|395906302|gb|EJH17201.1| ABC transporter family protein [Streptococcus pneumoniae GA60132]
Length = 284
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|348669737|gb|EGZ09559.1| hypothetical protein PHYSODRAFT_522438 [Phytophthora sojae]
Length = 845
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 104 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS 147
P T +L+L G GSGKSS + +S F NDK + QVTYN +
Sbjct: 107 PGTITLVL-GQPGSGKSSFMKLLSGRFPNDKNVTMEGQVTYNGT 149
>gi|288941920|ref|YP_003444160.1| putative serine protein kinase, PrkA [Allochromatium vinosum DSM
180]
gi|288897292|gb|ADC63128.1| putative serine protein kinase, PrkA [Allochromatium vinosum DSM
180]
Length = 640
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKELMEERPFYAIQGSPVFESPLGLFSPEEDGAILEEDY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|417699298|ref|ZP_12348468.1| ABC transporter family protein [Streptococcus pneumoniae GA41317]
gi|419454074|ref|ZP_13994043.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
gi|419506791|ref|ZP_14046451.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|332199239|gb|EGJ13317.1| ABC transporter family protein [Streptococcus pneumoniae GA41317]
gi|379604955|gb|EHZ69708.1| AAA domain family protein [Streptococcus pneumoniae GA49194]
gi|379624751|gb|EHZ89381.1| AAA domain family protein [Streptococcus pneumoniae EU-NP03]
Length = 264
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 4 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTT 63
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 64 IVNLLMKFYEIDK 76
>gi|83644329|ref|YP_432764.1| putative Ser protein kinase [Hahella chejuensis KCTC 2396]
gi|83632372|gb|ABC28339.1| putative Ser protein kinase [Hahella chejuensis KCTC 2396]
Length = 640
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ +F+ F + + + S +G DG +EY
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKSLFQKQPFFAIKDSPVFESPLGLFDPAEDGKILEEEY 161
Query: 159 TIP 161
IP
Sbjct: 162 GIP 164
>gi|410720856|ref|ZP_11360206.1| MoxR-like ATPase [Methanobacterium sp. Maddingley MBC34]
gi|410600130|gb|EKQ54663.1| MoxR-like ATPase [Methanobacterium sp. Maddingley MBC34]
Length = 287
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 75 TDAKNKIL---SYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 131
TD K+L SY P I NV + LS +L+ GP G+GK+ L +++ FE
Sbjct: 8 TDYVEKVLGENSYVPDDTIVNVVFLALS-----LKKPILIEGPPGTGKTELSKAVARAFE 62
Query: 132 NDKFASERAQ-VTYNSSVGDGTY 153
D F + + +T+ VG+ Y
Sbjct: 63 RDFFRVQCYEGITFEQIVGEWNY 85
>gi|225861712|ref|YP_002743221.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae Taiwan19F-14]
gi|298229673|ref|ZP_06963354.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298255185|ref|ZP_06978771.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298503656|ref|YP_003725596.1| sugar ABC transporter ATP-binding protein [Streptococcus pneumoniae
TCH8431/19A]
gi|387788942|ref|YP_006254010.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae ST556]
gi|417313377|ref|ZP_12100088.1| ABC transporter family protein [Streptococcus pneumoniae GA04375]
gi|418083712|ref|ZP_12720907.1| ABC transporter family protein [Streptococcus pneumoniae GA44288]
gi|418085894|ref|ZP_12723072.1| ABC transporter family protein [Streptococcus pneumoniae GA47281]
gi|418094697|ref|ZP_12731823.1| ABC transporter family protein [Streptococcus pneumoniae GA49138]
gi|418101366|ref|ZP_12738447.1| ABC transporter family protein [Streptococcus pneumoniae 7286-06]
gi|418119364|ref|ZP_12756319.1| ABC transporter family protein [Streptococcus pneumoniae GA18523]
gi|418142424|ref|ZP_12779235.1| ABC transporter family protein [Streptococcus pneumoniae GA13455]
gi|418151410|ref|ZP_12788155.1| ABC transporter family protein [Streptococcus pneumoniae GA14798]
gi|418153656|ref|ZP_12790393.1| ABC transporter family protein [Streptococcus pneumoniae GA16121]
gi|418158226|ref|ZP_12794940.1| ABC transporter family protein [Streptococcus pneumoniae GA16833]
gi|418165204|ref|ZP_12801870.1| ABC transporter family protein [Streptococcus pneumoniae GA17371]
gi|418172045|ref|ZP_12808666.1| ABC transporter family protein [Streptococcus pneumoniae GA19451]
gi|418196558|ref|ZP_12833033.1| ABC transporter family protein [Streptococcus pneumoniae GA47688]
gi|418198741|ref|ZP_12835197.1| ABC transporter family protein [Streptococcus pneumoniae GA47778]
gi|418224099|ref|ZP_12850738.1| ABC transporter family protein [Streptococcus pneumoniae 5185-06]
gi|418228409|ref|ZP_12855025.1| ABC transporter family protein [Streptococcus pneumoniae 3063-00]
gi|419425843|ref|ZP_13966037.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
7533-05]
gi|419427956|ref|ZP_13968136.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
5652-06]
gi|419430132|ref|ZP_13970294.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA11856]
gi|419436699|ref|ZP_13976784.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
8190-05]
gi|419438943|ref|ZP_13979010.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA13499]
gi|419447563|ref|ZP_13987567.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
7879-04]
gi|419449687|ref|ZP_13989682.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
4075-00]
gi|419451818|ref|ZP_13991802.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
EU-NP02]
gi|419502555|ref|ZP_14042236.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47628]
gi|419519616|ref|ZP_14059221.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA08825]
gi|419528861|ref|ZP_14068401.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA17719]
gi|421288305|ref|ZP_15739066.1| ABC transporter family protein [Streptococcus pneumoniae GA58771]
gi|225727629|gb|ACO23480.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae Taiwan19F-14]
gi|298239251|gb|ADI70382.1| possible sugar ABC superfamily ATP binding cassette transporter,
ABC protein [Streptococcus pneumoniae TCH8431/19A]
gi|327389082|gb|EGE87428.1| ABC transporter family protein [Streptococcus pneumoniae GA04375]
gi|353753967|gb|EHD34582.1| ABC transporter family protein [Streptococcus pneumoniae GA44288]
gi|353755369|gb|EHD35973.1| ABC transporter family protein [Streptococcus pneumoniae GA47281]
gi|353763666|gb|EHD44217.1| ABC transporter family protein [Streptococcus pneumoniae GA49138]
gi|353769427|gb|EHD49944.1| ABC transporter family protein [Streptococcus pneumoniae 7286-06]
gi|353790017|gb|EHD70403.1| ABC transporter family protein [Streptococcus pneumoniae GA18523]
gi|353804237|gb|EHD84521.1| ABC transporter family protein [Streptococcus pneumoniae GA13455]
gi|353813488|gb|EHD93717.1| ABC transporter family protein [Streptococcus pneumoniae GA14798]
gi|353815995|gb|EHD96206.1| ABC transporter family protein [Streptococcus pneumoniae GA16121]
gi|353821166|gb|EHE01344.1| ABC transporter family protein [Streptococcus pneumoniae GA16833]
gi|353828283|gb|EHE08425.1| ABC transporter family protein [Streptococcus pneumoniae GA17371]
gi|353834668|gb|EHE14767.1| ABC transporter family protein [Streptococcus pneumoniae GA19451]
gi|353859789|gb|EHE39738.1| ABC transporter family protein [Streptococcus pneumoniae GA47688]
gi|353860642|gb|EHE40583.1| ABC transporter family protein [Streptococcus pneumoniae GA47778]
gi|353878176|gb|EHE58011.1| ABC transporter family protein [Streptococcus pneumoniae 5185-06]
gi|353879983|gb|EHE59802.1| ABC transporter family protein [Streptococcus pneumoniae 3063-00]
gi|379138684|gb|AFC95475.1| multidrug resistance protein 3 (P-glycoprotein C) [Streptococcus
pneumoniae ST556]
gi|379536314|gb|EHZ01503.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA13499]
gi|379548969|gb|EHZ14081.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA11856]
gi|379563578|gb|EHZ28581.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA17719]
gi|379598597|gb|EHZ63384.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47628]
gi|379612303|gb|EHZ77023.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
8190-05]
gi|379612823|gb|EHZ77539.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
7879-04]
gi|379617279|gb|EHZ81971.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
5652-06]
gi|379617557|gb|EHZ82243.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
7533-05]
gi|379621685|gb|EHZ86327.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
4075-00]
gi|379621864|gb|EHZ86503.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
EU-NP02]
gi|379639655|gb|EIA04195.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA08825]
gi|395886038|gb|EJG97058.1| ABC transporter family protein [Streptococcus pneumoniae GA58771]
Length = 343
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|284165749|ref|YP_003404028.1| phosphate ABC transporter ATPase [Haloterrigena turkmenica DSM
5511]
gi|284015404|gb|ADB61355.1| phosphate ABC transporter, ATPase subunit [Haloterrigena turkmenica
DSM 5511]
Length = 284
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 86/211 (40%), Gaps = 22/211 (10%)
Query: 102 DVPKTTSLLLIGPKGSGKSSL---VNRISKVFENDKFASE---RAQVTYNSSVGD----- 150
D+P+ LIGP G GKS+ +NR++ + + + + R + Y+ V
Sbjct: 60 DIPEKQVTALIGPSGCGKSTFLRSINRMNDLIDIARVEGDLYFREKNVYDDDVDPVALRR 119
Query: 151 --GTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSS 208
G F P+ Y R D +N++ +E E V + DSS
Sbjct: 120 KIGMVFQSPNPFPKSIRDNVAYGLR--VQDKDENVDEKVRTALERAALLEEVEDQLDSSG 177
Query: 209 L-----RNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATT 263
L + + C A I +P VI ++ +D +A K + D+ ++Y +V T
Sbjct: 178 LDLSGGQQQRLCIARAIAPDPEVIL-MDEPASALDPIATSKIEDLIEDLSEEYT-VVIVT 235
Query: 264 FNCPYLSFRDDKPVVVVTHGDLLSLTDRARI 294
N + DK V +T G+L+ D +I
Sbjct: 236 HNMQQAARISDKTAVFLTGGELVEFDDTDKI 266
>gi|418190156|ref|ZP_12826667.1| ABC transporter family protein [Streptococcus pneumoniae GA47373]
gi|419482942|ref|ZP_14022727.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40563]
gi|419496097|ref|ZP_14035813.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47461]
gi|421303596|ref|ZP_15754259.1| ABC transporter family protein [Streptococcus pneumoniae GA17484]
gi|353852986|gb|EHE32970.1| ABC transporter family protein [Streptococcus pneumoniae GA47373]
gi|379578407|gb|EHZ43319.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA40563]
gi|379593117|gb|EHZ57931.1| DEAD/DEAH box helicase family protein [Streptococcus pneumoniae
GA47461]
gi|395899511|gb|EJH10451.1| ABC transporter family protein [Streptococcus pneumoniae GA17484]
Length = 343
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|448736025|ref|ZP_21718186.1| phosphate ABC transporter ATP-binding protein [Halococcus
thailandensis JCM 13552]
gi|445806543|gb|EMA56664.1| phosphate ABC transporter ATP-binding protein [Halococcus
thailandensis JCM 13552]
Length = 304
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 87/224 (38%), Gaps = 35/224 (15%)
Query: 102 DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASER--------AQVTYNSSVG---- 149
D+P+ + LIGP G GKS+ + ++++ ND+ + R Q Y SV
Sbjct: 67 DIPEESVTALIGPSGCGKSTFLRCLNRM--NDRIKAARVEGSVALDGQEIYGDSVDLVEL 124
Query: 150 ---DGTYFLQEYTIPRGSNSFSLYDTRS------------LSDDASDNINMIKLWIMEGV 194
G F Q P+ Y R DDA D +++ + +
Sbjct: 125 RKRVGMVFQQPNPFPKSIRKNVSYGPRKHGDVETGLLARLFGDDAGDEDALVERALRQAA 184
Query: 195 RHGELVIRRSDS----SSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDS 250
E+ R D+ S + + C A + +P VI ++ +D +A K +
Sbjct: 185 LWEEVDDRLDDNALGLSGGQQQRLCIARCLAVDPEVIL-MDEPASALDPIATAKIEDLIE 243
Query: 251 DVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARI 294
D+ + Y +V T N + D+ V +T G+L+ D I
Sbjct: 244 DLAENYT-VVVVTHNMQQAARISDQTAVFLTGGELVEYGDTNEI 286
>gi|348669738|gb|EGZ09560.1| hypothetical protein PHYSODRAFT_338333 [Phytophthora sojae]
Length = 593
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 104 PKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSS 147
P T +L+L G GSGKSS + +S F NDK + QVTYN +
Sbjct: 107 PGTITLVL-GQPGSGKSSFMKLLSGRFPNDKNVTMEGQVTYNGT 149
>gi|418194469|ref|ZP_12830957.1| ABC transporter family protein [Streptococcus pneumoniae GA47439]
gi|353856980|gb|EHE36945.1| ABC transporter family protein [Streptococcus pneumoniae GA47439]
Length = 343
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|418294114|ref|ZP_12906015.1| PrkA family serine protein kinase [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
gi|379065498|gb|EHY78241.1| PrkA family serine protein kinase [Pseudomonas stutzeri ATCC 14405
= CCUG 16156]
Length = 640
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E+ F + + + S +G D ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEHVPFYAIKGSPVFESPLGLFNPVEDAQILEEDY 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S+ S + T+ L + D ++KL+
Sbjct: 162 GIPRRYLSSIMSPWATKRLQEFGGDISKFRVVKLY 196
>gi|67465083|ref|XP_648726.1| AIG1 family protein [Entamoeba histolytica HM-1:IMSS]
gi|56464975|gb|EAL43340.1| AIG1 family protein [Entamoeba histolytica HM-1:IMSS]
Length = 290
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 96 MTLSDYDVPKTTSLLLIGPKGSGKSSLVNRI--SKVFE-NDKFASERAQVTYNSSVGD 150
M++S+ D PK T LLIG G+GKSSLVN I VFE +D S+ + S GD
Sbjct: 1 MSVSE-DKPKQTKFLLIGETGNGKSSLVNFILQKNVFEVSDDTKSQTKEAIVKSGEGD 57
>gi|430748567|ref|YP_007211475.1| multidrug ABC transporter ATPase/permease [Thermobacillus composti
KWC4]
gi|430732532|gb|AGA56477.1| ABC-type multidrug transport system, ATPase and permease component
[Thermobacillus composti KWC4]
Length = 572
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 102 DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIP 161
D+PK T L ++GP GSGKS+L++ I + + D + ++ G + LQ+Y
Sbjct: 362 DIPKGTKLAVVGPNGSGKSTLMHIIGGILKPDTGTVQTDEI--------GGFCLQDY--- 410
Query: 162 RGSNSFSLYDTRSLSD 177
G S+ D L D
Sbjct: 411 -GRYKLSVEDNVMLGD 425
>gi|448329632|ref|ZP_21518930.1| phosphate ABC transporter ATP-binding protein [Natrinema versiforme
JCM 10478]
gi|445613891|gb|ELY67581.1| phosphate ABC transporter ATP-binding protein [Natrinema versiforme
JCM 10478]
Length = 302
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 112/285 (39%), Gaps = 40/285 (14%)
Query: 31 SMNSGDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWI 90
S+ + D EGS + D LVD S D ++ S ++++ I S +
Sbjct: 19 SLANNDLEGSDPTTDPLVDS------------SIDVDKSAAPSGSESRTVIESRDLDVFY 66
Query: 91 ENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSL---VNRISKVFENDKFASERAQVTYNSS 147
++V + D D+P +IGP G GKS+ +NR++ + + + E N
Sbjct: 67 DDVQALQSVDIDIPAEQVTAIIGPSGCGKSTFLRCINRMNDLVDAARVDGELLFEGKNVY 126
Query: 148 VGD----------GTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHG 197
D G F P+ S+YD + D + + +R
Sbjct: 127 DDDVDPVVLRRKIGMVFQAPNPFPK-----SIYDNVTYGLDVQGVDGDYDEIVEDALRRA 181
Query: 198 EL---VIRRSDSSSL-----RNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGD 249
L V + DSS L + + C A I +P VI ++ +D +A K +
Sbjct: 182 ALWDEVKDQLDSSGLDLSGGQQQRLCIARAIAPDPDVIL-MDEPASALDPVATSKIEDLI 240
Query: 250 SDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARI 294
D+ ++Y +V T N + DK V +T G+L+ D +I
Sbjct: 241 EDLAEEYT-VVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 284
>gi|70732941|ref|YP_262712.1| PrkA family serine protein kinase [Pseudomonas protegens Pf-5]
gi|68347240|gb|AAY94846.1| protein kinase YeaG [Pseudomonas protegens Pf-5]
Length = 640
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ LS+ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLSEFGGDISQFRVVKLY 196
>gi|389680913|ref|ZP_10172259.1| protein kinase YeaG [Pseudomonas chlororaphis O6]
gi|399007387|ref|ZP_10709897.1| putative Ser protein kinase [Pseudomonas sp. GM17]
gi|425901938|ref|ZP_18878529.1| protein kinase YeaG [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|388555202|gb|EIM18449.1| protein kinase YeaG [Pseudomonas chlororaphis O6]
gi|397892646|gb|EJL09123.1| protein kinase YeaG [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|398120359|gb|EJM10023.1| putative Ser protein kinase [Pseudomonas sp. GM17]
Length = 640
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ LS+ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLSEFGGDISQFRVVKLY 196
>gi|319780035|ref|YP_004139511.1| ABC transporter [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317165923|gb|ADV09461.1| ABC transporter related protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 311
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 62 QSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYD--VPKTTSLLLIGPKGSGK 119
QS++ + G++ + +LS G + G + L+D D V + +IGP G+GK
Sbjct: 33 QSFEDVAKSAGAVAGDASALLSLQ-GISLSFGGVVALADIDLSVRQGEIRAIIGPNGAGK 91
Query: 120 SSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDA 179
SSL+N IS V+ D+ Q+ S T L + R + +L+ S+ D+
Sbjct: 92 SSLINVISGVYRPDR---GHVQLDGTSYAQVPTQRLAHLGVARTFQNLALFKGLSVLDNV 148
Query: 180 SDNI 183
+ +
Sbjct: 149 ASGL 152
>gi|119871829|ref|YP_929836.1| ABC transporter [Pyrobaculum islandicum DSM 4184]
gi|119673237|gb|ABL87493.1| amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
[Pyrobaculum islandicum DSM 4184]
Length = 246
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 90 IENVGGMTLSD---YDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND--KFASERAQVTY 144
++ GG+T D VP + ++L GP GSGK++L+N IS +++ D K E +TY
Sbjct: 13 VKKFGGLTALDGATIAVPLNSFVILAGPNGSGKTTLLNVISGIYQPDRGKVIFEGRDITY 72
Query: 145 N 145
Sbjct: 73 T 73
>gi|410208520|gb|JAA01479.1| interferon-induced protein 44 [Pan troglodytes]
gi|410349267|gb|JAA41237.1| interferon-induced protein 44 [Pan troglodytes]
Length = 444
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 35/132 (26%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGS 164
+LL+GP G+GKSS N + VF+ VT+ + VG T + E Y+I G
Sbjct: 189 ILLLGPIGAGKSSFFNSVRSVFQ--------GHVTHQALVGTNTTGISEKYRTYSIRDGK 240
Query: 165 NS----FSLYDTRSLSDD----ASDNINMI---------KLWIMEGVR--HGELVIRRSD 205
+ F L D+ LS+ D+I+ I + ME ++ H + + D
Sbjct: 241 DGKYLPFILCDSLGLSEKEGGLCMDDISYILNGNIRDRYQFNPMESIKLNHHDYI----D 296
Query: 206 SSSLRNRMRCKA 217
S SL++R+ C A
Sbjct: 297 SPSLKDRIHCVA 308
>gi|113865937|ref|NP_001038962.1| interferon-induced protein 44 [Pan troglodytes]
gi|129362|sp|P27473.1|IFI44_PANTR RecName: Full=Interferon-induced protein 44; AltName: Full=Antigen
p44; AltName: Full=Non-A non-B hepatitis-associated
microtubular aggregates protein
gi|218576|dbj|BAA14082.1| microtubular aggregates protein p44 [Pan troglodytes]
gi|410265714|gb|JAA20823.1| interferon-induced protein 44 [Pan troglodytes]
gi|410292436|gb|JAA24818.1| interferon-induced protein 44 [Pan troglodytes]
Length = 444
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 35/132 (26%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGS 164
+LL+GP G+GKSS N + VF+ VT+ + VG T + E Y+I G
Sbjct: 189 ILLLGPIGAGKSSFFNSVRSVFQ--------GHVTHQALVGTNTTGISEKYRTYSIRDGK 240
Query: 165 NS----FSLYDTRSLSDD----ASDNINMI---------KLWIMEGVR--HGELVIRRSD 205
+ F L D+ LS+ D+I+ I + ME ++ H + + D
Sbjct: 241 DGKYLPFILCDSLGLSEKEGGLCMDDISYILNGNIRDRYQFNPMESIKLNHHDYI----D 296
Query: 206 SSSLRNRMRCKA 217
S SL++R+ C A
Sbjct: 297 SPSLKDRIHCVA 308
>gi|385230269|ref|YP_005790185.1| hypothetical protein HPPN135_04925 [Helicobacter pylori Puno135]
gi|344336707|gb|AEN18668.1| hypothetical protein HPPN135_04925 [Helicobacter pylori Puno135]
Length = 898
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 33 NSGDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTD-AKNKILSYTPGAWIE 91
N D +G D+ D++ D V +E+L SY +T+ LT K K+ P E
Sbjct: 404 NKEDSDGDNDTADAM------DEVLKEILSSY---KTKALGLTKRVKEKVFKNDPTENQE 454
Query: 92 NVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRI-SKVFEN-DKFASERAQVTYNSSVG 149
+ L+ D+ ++ GP G+GK++++N I ++FE K + + Q+ +
Sbjct: 455 KAIKIALNTPDIA-----IIQGPPGTGKTTVINAICERLFEEYPKDKNIKGQILLCAQGH 509
Query: 150 DGTYFLQEYTIPRGSNSFSL 169
D T ++E T G +F
Sbjct: 510 DATNNVRERTKVGGLPTFKF 529
>gi|402566583|ref|YP_006615928.1| serine protein kinase PrkA [Burkholderia cepacia GG4]
gi|402247780|gb|AFQ48234.1| putative serine protein kinase PrkA [Burkholderia cepacia GG4]
Length = 640
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 17/130 (13%)
Query: 39 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 98
G + D+ +D R +V++ Y R G + + ++++Y A G+
Sbjct: 47 GEPEQIDTRIDPRLSRIFANKVIKVYPAFREFYG-MEEVIEQVVAYFRHA----AQGLE- 100
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGT 152
K L L+GP G GKSS+ R+ ++ E F S + S +G DG
Sbjct: 101 -----EKKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGP 155
Query: 153 YFLQEYTIPR 162
++Y IPR
Sbjct: 156 ILEEQYGIPR 165
>gi|226946694|ref|YP_002801767.1| serine protein kinase PrkA [Azotobacter vinelandii DJ]
gi|226721621|gb|ACO80792.1| serine protein kinase; PrkA [Azotobacter vinelandii DJ]
Length = 640
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNAAEDGEILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLSTIMSPWATKRLNEFGGDISQFRVVKLY 196
>gi|340789330|ref|YP_004754795.1| putative serine protein kinase, PrkA [Collimonas fungivorans
Ter331]
gi|340554597|gb|AEK63972.1| putative serine protein kinase, PrkA [Collimonas fungivorans
Ter331]
Length = 640
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 162
L L+GP G GKSS+ R+ ++ E+ F S + S +G DG ++Y IPR
Sbjct: 106 LYLLGPVGGGKSSIAERLKQLMEHVPFYSLKGSPVNESPLGLFDYEEDGAILEEQYGIPR 165
>gi|1085336|pir||S48218 microtubular aggregate protein - human
Length = 444
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 41/250 (16%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGS 164
+LL+GP G+GKSS N + VF+ VT+ + VG T + E Y+I G
Sbjct: 189 ILLLGPIGAGKSSFFNSVRSVFQ--------GHVTHQALVGTNTTGISEKYRTYSIRDGK 240
Query: 165 NS----FSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKI 220
+ F L D+ LS+ +I+ G IR + ++ H
Sbjct: 241 DGKYLPFILCDSLGLSEKEGGLCRDDIFYILNG------NIRDRYQFNPMESIKLNHHDY 294
Query: 221 GCEPSVIRKVNFVIFVVDGLAV-LKSMEGDSDVEKQYNQIV-ATTFNCPYLSFRDDKPVV 278
PS+ +++ V FV D ++ S + +++ ++V A + L+ D
Sbjct: 295 IDSPSLKDRIHCVAFVFDASSIQYFSSQMIVKIKRIQRELVNAGVVHVALLTHVDSMD-- 352
Query: 279 VVTHGDLLSLTDRARIRTYLGEL---LGIPPAKQIFDIPESS--------DPENELIIVD 327
++T GDL+ + +R+ L E+ LG + DI S DP +++I+
Sbjct: 353 LITKGDLIEIERCEPVRSKLEEVQRKLGFALS----DISVVSNYSSEWELDPVKDVLILS 408
Query: 328 MLRYCLEHAD 337
LR L AD
Sbjct: 409 ALRRMLWAAD 418
>gi|415912154|ref|ZP_11553503.1| PrkA serine kinase [Herbaspirillum frisingense GSF30]
gi|407762140|gb|EKF71048.1| PrkA serine kinase [Herbaspirillum frisingense GSF30]
Length = 599
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 61 KKQILYLLGPVGGGKSSIAERLKQLMEQVPFYSIKGSPVNESPLGLFDYDEDGAILEEQY 120
Query: 159 TIPR 162
IPR
Sbjct: 121 GIPR 124
>gi|295394390|ref|ZP_06804614.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Brevibacterium mcbrellneri ATCC 49030]
gi|294972742|gb|EFG48593.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Brevibacterium mcbrellneri ATCC 49030]
Length = 523
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 58 REVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYD--VPKTTSLLLIGPK 115
R++LQS ++ R DA + + A +E+ + L+D +P T + L+G
Sbjct: 237 RKLLQSVPRITDRAAEEQDASETVAARVEHARVEHGSTVALNDVSLTIPAHTIVGLVGES 296
Query: 116 GSGKSSLVNRISKVFENDKFASERAQVTYNSSV 148
GSGKS++ N ++ K AS A+V + V
Sbjct: 297 GSGKSTIANVLTGA---QKLASGTAEVAGTAVV 326
>gi|154412497|ref|XP_001579281.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913486|gb|EAY18295.1| hypothetical protein TVAG_254070 [Trichomonas vaginalis G3]
Length = 150
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 77 AKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEND 133
KN + +Y ++ V G+ D+D+ K +LLIGP GSGKS+L+ ++ D
Sbjct: 42 VKNLVKTYNTHRIVKAVNGV---DFDIQKGEIILLIGPNGSGKSTLLQSLTGALTTD 95
>gi|283768202|ref|ZP_06341115.1| ABC transporter, ATP-binding protein [Bulleidia extructa W1219]
gi|283105079|gb|EFC06450.1| ABC transporter, ATP-binding protein [Bulleidia extructa W1219]
Length = 605
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 11/65 (16%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE--------NDKFASERAQVTYNSSVGDG 151
+ D+P T++ ++G G+GKS+LVN + + +E + K A +R+Q+ +S +G
Sbjct: 379 NLDIPHGTNVAIVGETGAGKSTLVNLVCRFYEPTRGRILIDGKDARDRSQLWLHSHIG-- 436
Query: 152 TYFLQ 156
Y LQ
Sbjct: 437 -YVLQ 440
>gi|409418299|ref|ZP_11258298.1| PrkA family serine protein kinase [Pseudomonas sp. HYS]
Length = 640
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNAAEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|418048649|ref|ZP_12686736.1| Phosphate-transporting ATPase [Mycobacterium rhodesiae JS60]
gi|353189554|gb|EHB55064.1| Phosphate-transporting ATPase [Mycobacterium rhodesiae JS60]
Length = 242
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 100 DYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDK 134
D DVP ++ +IGP GSGKS+L+ +++++E D+
Sbjct: 25 DLDVPAGSTSAVIGPSGSGKSTLLRTLNRLYEPDR 59
>gi|338996725|ref|ZP_08635435.1| PrkA family serine protein kinase [Halomonas sp. TD01]
gi|338766366|gb|EGP21288.1| PrkA family serine protein kinase [Halomonas sp. TD01]
Length = 640
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEYTIPR 162
L L+GP G GKSSL R+ + E F + + Y S +G DG +EY IP+
Sbjct: 106 LYLLGPVGGGKSSLAERLKLLMERIPFYAIKDSPVYESPLGLFSPEEDGELLEKEYGIPQ 165
>gi|429334663|ref|ZP_19215317.1| PrkA family serine protein kinase [Pseudomonas putida CSV86]
gi|428760734|gb|EKX82994.1| PrkA family serine protein kinase [Pseudomonas putida CSV86]
Length = 640
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNAAEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|402082210|gb|EJT77355.1| hypothetical protein GGTG_07267 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 652
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 109 LLLIGPKGSGKSSLVNRI----SKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGS 164
+LL+GP +GK++L+NRI + E + ++ + T ++V D L +Y I
Sbjct: 87 VLLVGPSQNGKTTLINRIIDLAANHVERGQEGNKTGKCTQTTAVYDLDVQLSQYAI---- 142
Query: 165 NSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRM 213
F+ + D +D +++I+ W +G + GEL++ + ++ R+
Sbjct: 143 --FNKETGLEIPDITTDEMSLIRNW-RKGSKDGELMLLNPHAHYVKLRL 188
>gi|445063955|ref|ZP_21376082.1| ABC transporter [Brachyspira hampsonii 30599]
gi|444504666|gb|ELV05301.1| ABC transporter [Brachyspira hampsonii 30599]
Length = 238
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 132
+L A+N + ++NV ++D+ K ++L+GP GSGK++L+N + + +
Sbjct: 11 TLISARNIEKKFNKNLILKNV------NFDINKGEIIVLVGPNGSGKTTLINILLGILKA 64
Query: 133 DKFASERAQVTYNSSVG---DGTYFLQEYTIPRGSNSFS-LYDTRSLSDDASDNI 183
DK + Y +G T F Y++ FS LYD + ++D+ ++I
Sbjct: 65 DKGELKINIDNYKKHIGVQLQSTPFFDGYSVKDNILMFSALYDIK-MTDEEIESI 118
>gi|429211573|ref|ZP_19202738.1| putative protein kinase [Pseudomonas sp. M1]
gi|428156055|gb|EKX02603.1| putative protein kinase [Pseudomonas sp. M1]
Length = 640
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K + L+GP G GKSSL ++ ++ E F + + + S +G DG ++Y
Sbjct: 102 KKQIIYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNPDEDGAILEEDY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|166706911|ref|NP_006408.3| interferon-induced protein 44 [Homo sapiens]
gi|224471836|sp|Q8TCB0.2|IFI44_HUMAN RecName: Full=Interferon-induced protein 44; Short=p44; AltName:
Full=Microtubule-associated protein 44
gi|119626752|gb|EAX06347.1| interferon-induced protein 44, isoform CRA_a [Homo sapiens]
gi|119626753|gb|EAX06348.1| interferon-induced protein 44, isoform CRA_a [Homo sapiens]
Length = 444
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 41/250 (16%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGS 164
+LL+GP G+GKSS N + VF+ VT+ + VG T + E Y+I G
Sbjct: 189 ILLLGPIGAGKSSFFNSVRSVFQ--------GHVTHQALVGTNTTGISEKYRTYSIRDGK 240
Query: 165 NS----FSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKI 220
+ F L D+ LS+ +I+ G IR + ++ H
Sbjct: 241 DGKYLPFILCDSLGLSEKEGGLCRDDIFYILNG------NIRDRYQFNPMESIKLNHHDY 294
Query: 221 GCEPSVIRKVNFVIFVVDGLAV-LKSMEGDSDVEKQYNQIV-ATTFNCPYLSFRDDKPVV 278
PS+ +++ V FV D ++ S + +++ ++V A + L+ D
Sbjct: 295 IDSPSLKDRIHCVAFVFDASSIQYFSSQMIVKIKRIRRELVNAGVVHVALLTHVDSMD-- 352
Query: 279 VVTHGDLLSLTDRARIRTYLGEL---LGIPPAKQIFDIPESS--------DPENELIIVD 327
++T GDL+ + +R+ L E+ LG + DI S DP +++I+
Sbjct: 353 LITKGDLIEIERCEPVRSKLEEVQRKLGFALS----DISVVSNYSSEWELDPVKDVLILS 408
Query: 328 MLRYCLEHAD 337
LR L AD
Sbjct: 409 ALRRMLWAAD 418
>gi|194333784|ref|YP_002015644.1| FAD linked oxidase domain-containing protein [Prosthecochloris
aestuarii DSM 271]
gi|194311602|gb|ACF45997.1| FAD linked oxidase domain protein [Prosthecochloris aestuarii DSM
271]
Length = 1221
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 17/118 (14%)
Query: 30 LSMNSGDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRI----------GSLTDAKN 79
++M SG+ R + L D V E++ S +R RI G D N
Sbjct: 317 IAMPSGESWSVRRTDHRLRKIMHEDTVTYEIVDSQGDIRNRIELLGTDIRKKGLWKDITN 376
Query: 80 KILSYTPGAWIENVGGMTLS-------DYDVPKTTSLLLIGPKGSGKSSLVNRISKVF 130
K L PG E G+ S Y+V KT L GP S ++ +SK+F
Sbjct: 377 KALGGVPGLQKEGTDGVITSAHFILYPKYEVTKTLCLEFFGPDMDEASRVIVELSKIF 434
>gi|377820709|ref|YP_004977080.1| putative serine protein kinase PrkA [Burkholderia sp. YI23]
gi|357935544|gb|AET89103.1| putative serine protein kinase, PrkA [Burkholderia sp. YI23]
Length = 640
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 17/130 (13%)
Query: 39 GSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVGGMTL 98
G + D+ +D R +V++ Y R G + + ++SY A G+
Sbjct: 47 GEPEHVDTRLDPRLSRVFANKVIKVYPAFREFYG-MEEVIENVVSYFRHA----AQGLE- 100
Query: 99 SDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGT 152
K L L+GP G GKSS+ R+ ++ E F S + S +G DG
Sbjct: 101 -----EKKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGP 155
Query: 153 YFLQEYTIPR 162
++Y IPR
Sbjct: 156 VLEEQYGIPR 165
>gi|399925365|ref|ZP_10782723.1| antibiotic ABC transporter ATP-binding protein [Peptoniphilus
rhinitidis 1-13]
Length = 312
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF 130
+G+L + + + Y ++N+ D DV K L L+GP GSGKS+ +N I +
Sbjct: 1 MGNLIEVRGLVKKYKELTAVDNL------DLDVEKGEILGLLGPNGSGKSTTINCILSLL 54
Query: 131 ENDK-----FASERAQVTYNSSVGDGTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNIN- 184
+ D F E + Y+ G F ++YD ++ +NI+
Sbjct: 55 KKDSGSVKIFGKEMSADAYDIKKRIGVVF----------QDVAVYDELTV----YENIDY 100
Query: 185 MIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNF 232
L+I + +LV R D SL + ++ K K+ ++R++N
Sbjct: 101 FCGLYIQDKSERSKLVKRALDLVSLNDFVKFKPKKLS--GGLLRRLNI 146
>gi|431928746|ref|YP_007241780.1| Ser protein kinase [Pseudomonas stutzeri RCH2]
gi|431827033|gb|AGA88150.1| putative Ser protein kinase [Pseudomonas stutzeri RCH2]
Length = 640
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G D ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMERVPFYAIKGSPVFESPLGLFNPVEDAQILEEDY 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR S+ S + T+ L + D ++KL+
Sbjct: 162 GIPRRYLSSIMSPWATKRLQEFGGDISKFRVVKLY 196
>gi|18605554|gb|AAH22870.1| Interferon-induced protein 44 [Homo sapiens]
gi|312151472|gb|ADQ32248.1| interferon-induced protein 44 [synthetic construct]
Length = 444
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 41/250 (16%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGS 164
+LL+GP G+GKSS N + VF+ VT+ + VG T + E Y+I G
Sbjct: 189 ILLLGPIGAGKSSFFNSVRSVFQ--------GHVTHQALVGTNTTGISEKYRTYSIRDGK 240
Query: 165 NS----FSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAHKI 220
+ F L D+ LS+ +I+ G IR + ++ H
Sbjct: 241 DGKYLPFILCDSLGLSEKEGGLCRDDIFYILNG------NIRDRYQFNPMESIKLNHHDY 294
Query: 221 GCEPSVIRKVNFVIFVVDGLAV-LKSMEGDSDVEKQYNQIV-ATTFNCPYLSFRDDKPVV 278
PS+ +++ V FV D ++ S + +++ ++V A + L+ D
Sbjct: 295 IDSPSLKDRIHCVAFVFDASSIQYFSSQMIVKIKRIRRELVNAGVVHVALLTHVDSMD-- 352
Query: 279 VVTHGDLLSLTDRARIRTYLGEL---LGIPPAKQIFDIPESS--------DPENELIIVD 327
++T GDL+ + +R+ L E+ LG + DI S DP +++I+
Sbjct: 353 LITKGDLIEIERCEPVRSKLEEVQRKLGFALS----DISVVSNYSSEWELDPVKDVLILS 408
Query: 328 MLRYCLEHAD 337
LR L AD
Sbjct: 409 ALRRMLWAAD 418
>gi|429192712|ref|YP_007178390.1| phosphate ABC transporter ATP-binding protein [Natronobacterium
gregoryi SP2]
gi|448324660|ref|ZP_21514077.1| phosphate ABC transporter ATP-binding protein [Natronobacterium
gregoryi SP2]
gi|429136930|gb|AFZ73941.1| phosphate ABC transporter, ATP-binding protein [Natronobacterium
gregoryi SP2]
gi|445618141|gb|ELY71723.1| phosphate ABC transporter ATP-binding protein [Natronobacterium
gregoryi SP2]
Length = 295
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 30/216 (13%)
Query: 102 DVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQV--------TYNSSVGDGTY 153
++P+ +IGP G GKS+ + I+++ ND+ A+ R + Y+ V
Sbjct: 69 EIPENRVTAMIGPSGCGKSTFLRSINRM--NDRIAAARVEGDLYFRGKNVYDEDVDPVAL 126
Query: 154 FLQEYTIPRGSNSF--SLYDTRSLS---DDASDNINM----------IKLWIMEGVRHGE 198
+ + + N F S+YD + +D++++ LW H +
Sbjct: 127 RRKIGQVFQSPNPFPKSIYDNVAYGLRVQGKADDVDLDEAVERALRGAALW---DEVHDQ 183
Query: 199 LVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQ 258
L D S + + C A I +P VI ++ +D +A K + ++ ++Y
Sbjct: 184 LGESGLDLSGGQQQRLCIARAIATDPEVIL-MDEPTSALDPVAASKIEDLIDELVEEYTV 242
Query: 259 IVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARI 294
I+ T N + DK V +T G+L+ D ARI
Sbjct: 243 II-VTHNMQQAARISDKTAVFLTGGELVEFDDTARI 277
>gi|77461360|ref|YP_350867.1| Serine protein kinase, PrkA [Pseudomonas fluorescens Pf0-1]
gi|77385363|gb|ABA76876.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 640
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|254478558|ref|ZP_05091932.1| hypothetical protein CDSM653_1628 [Carboxydibrachium pacificum DSM
12653]
gi|214035487|gb|EEB76187.1| hypothetical protein CDSM653_1628 [Carboxydibrachium pacificum DSM
12653]
Length = 189
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 90 IENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQ 141
I+N + +++ P++ L+L+GP SGKS+++ I+ + D +SER Q
Sbjct: 8 IKNFRSIKHLEFEFPESNLLVLVGPNNSGKSNIIRAINLICGEDWVSSERLQ 59
>gi|419445411|ref|ZP_13985425.1| ABC transporter transmembrane region family protein [Streptococcus
pneumoniae GA19923]
gi|379570469|gb|EHZ35432.1| ABC transporter transmembrane region family protein [Streptococcus
pneumoniae GA19923]
Length = 633
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTTS----LLLIGPKGSGKSS 121
IGS K+ +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 373 IGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSVTAHAGQRVAIVGPTGAGKTT 432
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 433 IVNLLMKFYEIDK 445
>gi|330812136|ref|YP_004356598.1| hypothetical protein PSEBR_a5142 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699692|ref|ZP_17674182.1| protein kinase YeaG [Pseudomonas fluorescens Q8r1-96]
gi|327380244|gb|AEA71594.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387996561|gb|EIK57891.1| protein kinase YeaG [Pseudomonas fluorescens Q8r1-96]
Length = 640
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFKVVKLY 196
>gi|156395870|ref|XP_001637333.1| predicted protein [Nematostella vectensis]
gi|156224444|gb|EDO45270.1| predicted protein [Nematostella vectensis]
Length = 261
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 107 TSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEYTIPRGSNS 166
+ + + G GSGKS+L+N I K+ E+ S+ G+GT L+ + +P
Sbjct: 51 SRIAVFGMTGSGKSALINTIHKILN----GGEQGPAVVQSAGGEGTLSLEYFFLPHP--G 104
Query: 167 FSLYDTRSLSD 177
F++ DTR D
Sbjct: 105 FNMVDTRGFFD 115
>gi|297279004|ref|XP_001100154.2| PREDICTED: interferon-induced protein 44-like [Macaca mulatta]
Length = 455
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 94/237 (39%), Gaps = 51/237 (21%)
Query: 70 RIGSLTDAKNKILS----YTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNR 125
RI + +NK+L+ Y P A D+ +LL+GP GSGKSS N
Sbjct: 170 RIMKAREHRNKLLADIRAYKPYA-------------DLVSEIRILLVGPVGSGKSSFFNS 216
Query: 126 ISKVFENDKFASERAQVTYNSSVGDGTYFLQE----YTIPRGSNS----FSLYDTRSLSD 177
+ VF VT + VG T + E Y++ G N F L DT L
Sbjct: 217 VKSVFH--------GHVTGQAIVGSDTTSITERYRIYSVKDGKNGNSLPFMLCDTMGLDG 268
Query: 178 DASDNINMIKL-WIMEGVRHGELVIRRSDSSSLRNRMRCKAHKIGCEPSVIRKVNFVIFV 236
+ M + +I++G I + R + + PS+ +++ V +V
Sbjct: 269 AEGAGLCMDDIPYILKG------CIPDRYQFNPRKPITPEHSTFITSPSLKDRIHCVAYV 322
Query: 237 VDGLAVLKSMEG-DSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRA 292
+D + S++ S + ++ Q+ NC + V ++TH D + L +
Sbjct: 323 LD----INSIDNLSSKMLAKFKQVHKEVLNCGVVH------VALLTHVDSMDLITKG 369
>gi|395495213|ref|ZP_10426792.1| PrkA family serine protein kinase [Pseudomonas sp. PAMC 25886]
gi|395796293|ref|ZP_10475591.1| PrkA family serine protein kinase [Pseudomonas sp. Ag1]
gi|421139617|ref|ZP_15599651.1| thiosulfate sulfurtransferase [Pseudomonas fluorescens BBc6R8]
gi|395339595|gb|EJF71438.1| PrkA family serine protein kinase [Pseudomonas sp. Ag1]
gi|404509189|gb|EKA23125.1| thiosulfate sulfurtransferase [Pseudomonas fluorescens BBc6R8]
Length = 640
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|218130139|ref|ZP_03458943.1| hypothetical protein BACEGG_01726 [Bacteroides eggerthii DSM 20697]
gi|217987643|gb|EEC53971.1| phosphate ABC transporter, ATP-binding protein [Bacteroides
eggerthii DSM 20697]
Length = 254
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 104/276 (37%), Gaps = 57/276 (20%)
Query: 74 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSS---LVNRISKVF 130
+ D NKI + W N + D+ + + + IGP G GKS+ L+NR++ +
Sbjct: 1 MNDVMNKIETCDVNFWYGNFHALKGISMDIAEKSVVAFIGPSGCGKSTFLRLLNRMNDLI 60
Query: 131 ENDKFASE---RAQVTYNSSV-------GDGTYFLQEYTIPRGSNSFSLYDTR--SLSDD 178
+ + E Q Y V G F + P+ Y R ++D
Sbjct: 61 PDTRLTGEVLIDGQDIYKKGVQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVTDS 120
Query: 179 ASDNINMIKLWIMEGVRHGELVIRRSDS--------SSLRNRMRCKAHKIGCEPSVIRKV 230
A I+ + E +R L D S + + C A + PSV+ +
Sbjct: 121 A-----FIRRRVEEALRGAALWDEVKDKLKVSAYALSGGQQQRLCIARAMAVSPSVLL-M 174
Query: 231 NFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTD 290
+ +D ++ K E +++KQY +V+VTH ++
Sbjct: 175 DEPASALDPISTAKVEELIHELKKQYT-------------------IVIVTH----NMQQ 211
Query: 291 RARIRT-----YLGELLGIPPAKQIFDIPESSDPEN 321
AR+ Y+GE++ K+IF P+ + +N
Sbjct: 212 AARVSDSTAFFYMGEMVEFGDTKKIFTNPDKVETQN 247
>gi|398967701|ref|ZP_10682051.1| putative Ser protein kinase [Pseudomonas sp. GM30]
gi|424925261|ref|ZP_18348622.1| Ser protein kinase [Pseudomonas fluorescens R124]
gi|398144462|gb|EJM33294.1| putative Ser protein kinase [Pseudomonas sp. GM30]
gi|404306421|gb|EJZ60383.1| Ser protein kinase [Pseudomonas fluorescens R124]
Length = 640
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|398841892|ref|ZP_10599098.1| putative Ser protein kinase [Pseudomonas sp. GM102]
gi|398856713|ref|ZP_10612431.1| putative Ser protein kinase [Pseudomonas sp. GM79]
gi|398901155|ref|ZP_10650106.1| putative Ser protein kinase [Pseudomonas sp. GM50]
gi|399000538|ref|ZP_10703264.1| putative Ser protein kinase [Pseudomonas sp. GM18]
gi|398107256|gb|EJL97262.1| putative Ser protein kinase [Pseudomonas sp. GM102]
gi|398129765|gb|EJM19121.1| putative Ser protein kinase [Pseudomonas sp. GM18]
gi|398180274|gb|EJM67860.1| putative Ser protein kinase [Pseudomonas sp. GM50]
gi|398242685|gb|EJN28292.1| putative Ser protein kinase [Pseudomonas sp. GM79]
Length = 640
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|395651024|ref|ZP_10438874.1| PrkA family serine protein kinase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 640
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|418147170|ref|ZP_12783945.1| ABC transporter family protein [Streptococcus pneumoniae GA13637]
gi|421218639|ref|ZP_15675528.1| ABC transporter family protein [Streptococcus pneumoniae 2070335]
gi|353811198|gb|EHD91441.1| ABC transporter family protein [Streptococcus pneumoniae GA13637]
gi|395581955|gb|EJG42419.1| ABC transporter family protein [Streptococcus pneumoniae 2070335]
Length = 343
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVG-----GMTLSDYDVPKTT----SLLLIGPKGSGKSS 121
IGS K +++ P + + G G+ + DYD T + ++GP G+GK++
Sbjct: 83 IGSTGSGKLTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGAGKTT 142
Query: 122 LVNRISKVFENDK 134
+VN + K +E DK
Sbjct: 143 IVNLLMKFYEIDK 155
>gi|432329863|ref|YP_007248006.1| ABC-type phosphate transport system, ATPase component
[Methanoregula formicicum SMSP]
gi|432136572|gb|AGB01499.1| ABC-type phosphate transport system, ATPase component
[Methanoregula formicicum SMSP]
Length = 252
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 35/234 (14%)
Query: 102 DVPKTTSLLLIGPKGSGKSSL---VNRISKVFENDKFASERAQVTYNSSVGDGTYFLQEY 158
++PK ++IGP G GKS+L +NR++ + EN K E + +G L
Sbjct: 27 EIPKNQITVIIGPSGCGKSTLLRSINRMTDLVENVKTEGE--------ILINGNNVLDPA 78
Query: 159 TIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGELVIRRSDSSSLRNRMRCKAH 218
T +L D R + N + + I + V +G + D + L ++
Sbjct: 79 T--------NLSDLRKNVGMIAQAPNPLPMSIYDNVVYGPKIHGMRDPAILDEKVELSLK 130
Query: 219 KIGCEPSVIRKV-----------NFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCP 267
++G V ++ + + LAV + + + + A
Sbjct: 131 RVGLWDEVHDRLKDPASALSLGQQQRLCLARALAVGPKILLCDETTSALDPLSAKHIEDE 190
Query: 268 YLSFRDDKPVVVVTH--GDLLSLTDRARIRTYLGELLGIPPAKQIFDIPESSDP 319
+S R+D +V VTH L D A + YLGE++ PA ++F P+ DP
Sbjct: 191 LISLRNDYTIVFVTHILRQAKRLADYA-VFLYLGEVVECGPAHEVFTSPK--DP 241
>gi|409408124|ref|ZP_11256568.1| Ser protein kinase [Herbaspirillum sp. GW103]
gi|386432580|gb|EIJ45407.1| Ser protein kinase [Herbaspirillum sp. GW103]
Length = 640
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMEQVPFYSIKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|167562829|ref|ZP_02355745.1| serine protein kinase [Burkholderia oklahomensis EO147]
gi|167570009|ref|ZP_02362883.1| serine protein kinase [Burkholderia oklahomensis C6786]
Length = 640
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVSFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|413962655|ref|ZP_11401882.1| PrkA family serine protein kinase [Burkholderia sp. SJ98]
gi|413928487|gb|EKS67775.1| PrkA family serine protein kinase [Burkholderia sp. SJ98]
Length = 640
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPVLEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|300710209|ref|YP_003736023.1| phosphate ABC transporter ATP-binding protein [Halalkalicoccus
jeotgali B3]
gi|299123892|gb|ADJ14231.1| phosphate ABC transporter ATP-binding protein [Halalkalicoccus
jeotgali B3]
Length = 287
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 29/214 (13%)
Query: 102 DVPKTTSLLLIGPKGSGKSSL---VNRISKVFENDKFASE---RAQVTYNSSVGD----- 150
++P+ +IGP G GKS+ +NR++ + + + E R + Y+ V
Sbjct: 64 EIPEHQVTAIIGPSGCGKSTFLRSINRMNDLIDVARVEGELLFRGKNVYDQDVDSVALRR 123
Query: 151 --GTYFLQEYTIPRGSNSFSLYDTRSLSDDASDNINMIKLWIMEGVRHGEL---VIRRSD 205
G F + P+ Y + ++ +D I ++H L V + D
Sbjct: 124 RIGMVFQKPNPFPKSIRDNVAYGLKVQGEEVTDE------KIERALKHAALWEEVKDKLD 177
Query: 206 SSSL-----RNRMRCKAHKIGCEPSVIRKVNFVIFVVDGLAVLKSMEGDSDVEKQYNQIV 260
SS L + + C A I +P VI ++ +D +A K + D+ + Y +V
Sbjct: 178 SSGLDLSGGQQQRLCIARAIAPDPEVIL-MDEPASALDPVATSKIEDLIEDLARDYT-VV 235
Query: 261 ATTFNCPYLSFRDDKPVVVVTHGDLLSLTDRARI 294
T N + DK V +T G+L+ D ++
Sbjct: 236 IVTHNMQQAARISDKTAVFLTGGELVEFGDTNKV 269
>gi|300313624|ref|YP_003777716.1| Ser protein kinase [Herbaspirillum seropedicae SmR1]
gi|125858431|emb|CAM34548.1| serine protein kinase [Herbaspirillum seropedicae]
gi|300076409|gb|ADJ65808.1| Ser protein kinase protein [Herbaspirillum seropedicae SmR1]
Length = 640
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMEQVPFYSIKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|398875245|ref|ZP_10630423.1| putative Ser protein kinase [Pseudomonas sp. GM67]
gi|398883041|ref|ZP_10638002.1| putative Ser protein kinase [Pseudomonas sp. GM60]
gi|398197614|gb|EJM84590.1| putative Ser protein kinase [Pseudomonas sp. GM60]
gi|398208175|gb|EJM94913.1| putative Ser protein kinase [Pseudomonas sp. GM67]
Length = 640
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|398959144|ref|ZP_10677960.1| putative Ser protein kinase [Pseudomonas sp. GM33]
gi|426411838|ref|YP_007031937.1| PrkA family serine protein kinase [Pseudomonas sp. UW4]
gi|398145519|gb|EJM34300.1| putative Ser protein kinase [Pseudomonas sp. GM33]
gi|426270055|gb|AFY22132.1| PrkA family serine protein kinase [Pseudomonas sp. UW4]
Length = 640
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNSTEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|294791310|ref|ZP_06756467.1| ABC transporter, permease/ATP-binding protein [Scardovia inopinata
F0304]
gi|294457781|gb|EFG26135.1| ABC transporter, permease/ATP-binding protein [Scardovia inopinata
F0304]
Length = 602
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 71 IGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVF 130
I D N + Y P N+ + L D+ + T++ L+GP G+GK++++N +S+ +
Sbjct: 349 IEGWVDFNNVVFRYEPDG--RNI--LNLVDFHIQPATTVALVGPTGAGKTTIINLLSRFY 404
Query: 131 E 131
+
Sbjct: 405 D 405
>gi|344205313|ref|YP_004790455.1| glycerol ABC transporter ATP-binding protein [Mycoplasma
putrefaciens KS1]
gi|194021478|gb|ACF32337.1| GtsA [Mycoplasma putrefaciens KS1]
gi|343957236|gb|AEM68951.1| Glycerol ABC transporter, ATP-binding protein [Mycoplasma
putrefaciens KS1]
Length = 408
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 91 ENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVGD 150
+N + + D ++PK + L+GP GSGK++L+N I K +S + N + +
Sbjct: 24 QNQHNLEIQDLEIPKDQIISLLGPSGSGKTTLLNLILGYL---KPSSGTISIKNNPKIHE 80
Query: 151 GTYFLQEYTIPRGSNSFS 168
Y +QE +I + F+
Sbjct: 81 IAYIMQEGSIYENVSVFN 98
>gi|398890185|ref|ZP_10643872.1| putative Ser protein kinase [Pseudomonas sp. GM55]
gi|398188488|gb|EJM75790.1| putative Ser protein kinase [Pseudomonas sp. GM55]
Length = 640
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNSTEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|398853800|ref|ZP_10610392.1| putative Ser protein kinase [Pseudomonas sp. GM80]
gi|398983248|ref|ZP_10689920.1| putative Ser protein kinase [Pseudomonas sp. GM24]
gi|399011942|ref|ZP_10714271.1| putative Ser protein kinase [Pseudomonas sp. GM16]
gi|398116952|gb|EJM06708.1| putative Ser protein kinase [Pseudomonas sp. GM16]
gi|398157434|gb|EJM45823.1| putative Ser protein kinase [Pseudomonas sp. GM24]
gi|398238417|gb|EJN24146.1| putative Ser protein kinase [Pseudomonas sp. GM80]
Length = 640
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|423093360|ref|ZP_17081156.1| protein kinase YeaG [Pseudomonas fluorescens Q2-87]
gi|397882482|gb|EJK98969.1| protein kinase YeaG [Pseudomonas fluorescens Q2-87]
Length = 640
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|429124041|ref|ZP_19184573.1| ABC transporter [Brachyspira hampsonii 30446]
gi|426279771|gb|EKV56790.1| ABC transporter [Brachyspira hampsonii 30446]
Length = 230
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 73 SLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFEN 132
+L A+N + ++NV ++D+ K ++L+GP GSGK++L+N + + +
Sbjct: 3 TLISARNIEKKFNKNLILKNV------NFDINKGEIIVLVGPNGSGKTTLINILLGILKA 56
Query: 133 DKFASERAQVTYNSSVG---DGTYFLQEYTIPRGSNSFS-LYDTRSLSDDASDNI 183
DK + Y +G T F Y++ FS LYD + ++D+ ++I
Sbjct: 57 DKGELKINIDNYKKHIGVQLQSTPFFDGYSVKDNILMFSALYDIK-MTDEEIESI 110
>gi|398873138|ref|ZP_10628403.1| putative Ser protein kinase [Pseudomonas sp. GM74]
gi|398200423|gb|EJM87335.1| putative Ser protein kinase [Pseudomonas sp. GM74]
Length = 640
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNSTEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|398908992|ref|ZP_10654326.1| putative Ser protein kinase [Pseudomonas sp. GM49]
gi|398188931|gb|EJM76219.1| putative Ser protein kinase [Pseudomonas sp. GM49]
Length = 640
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|398924280|ref|ZP_10661097.1| putative Ser protein kinase [Pseudomonas sp. GM48]
gi|398173611|gb|EJM61441.1| putative Ser protein kinase [Pseudomonas sp. GM48]
Length = 640
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMEKVPFYAIKGSPVFESPLGLFNSTEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|330796525|ref|XP_003286317.1| hypothetical protein DICPUDRAFT_15780 [Dictyostelium purpureum]
gi|325083744|gb|EGC37189.1| hypothetical protein DICPUDRAFT_15780 [Dictyostelium purpureum]
Length = 821
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 67 LRTRIGSLTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRI 126
L + S ++KNKIL + N + + K SLLL GP+ SGKS+++N +
Sbjct: 258 LLNNLESFDNSKNKILKLLNIYFGNNKESLKYDSLGISKARSLLLYGPQSSGKSTIINGL 317
Query: 127 SKVFE 131
+K +
Sbjct: 318 AKYLD 322
>gi|170732937|ref|YP_001764884.1| putative serine protein kinase PrkA [Burkholderia cenocepacia
MC0-3]
gi|206560027|ref|YP_002230791.1| PrkA family serine protein kinase [Burkholderia cenocepacia J2315]
gi|421870954|ref|ZP_16302579.1| Serine protein kinase (prkA protein), P-loop containing
[Burkholderia cenocepacia H111]
gi|444358592|ref|ZP_21159985.1| PrkA serine protein kinase [Burkholderia cenocepacia BC7]
gi|444372227|ref|ZP_21171713.1| PrkA serine protein kinase [Burkholderia cenocepacia K56-2Valvano]
gi|169816179|gb|ACA90762.1| putative serine protein kinase, PrkA [Burkholderia cenocepacia
MC0-3]
gi|198036068|emb|CAR51962.1| PrkA family serine protein kinase [Burkholderia cenocepacia J2315]
gi|358069102|emb|CCE53457.1| Serine protein kinase (prkA protein), P-loop containing
[Burkholderia cenocepacia H111]
gi|443593903|gb|ELT62600.1| PrkA serine protein kinase [Burkholderia cenocepacia K56-2Valvano]
gi|443603753|gb|ELT71738.1| PrkA serine protein kinase [Burkholderia cenocepacia BC7]
Length = 640
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|107022686|ref|YP_621013.1| serine protein kinase PrkA [Burkholderia cenocepacia AU 1054]
gi|116689635|ref|YP_835258.1| putative serine protein kinase PrkA [Burkholderia cenocepacia
HI2424]
gi|254245485|ref|ZP_04938806.1| hypothetical protein BCPG_00191 [Burkholderia cenocepacia PC184]
gi|105892875|gb|ABF76040.1| putative serine protein kinase, PrkA [Burkholderia cenocepacia AU
1054]
gi|116647724|gb|ABK08365.1| putative serine protein kinase, PrkA [Burkholderia cenocepacia
HI2424]
gi|124870261|gb|EAY61977.1| hypothetical protein BCPG_00191 [Burkholderia cenocepacia PC184]
Length = 640
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|78066221|ref|YP_368990.1| serine protein kinase PrkA [Burkholderia sp. 383]
gi|77966966|gb|ABB08346.1| putative serine protein kinase, PrkA [Burkholderia sp. 383]
Length = 640
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|229592958|ref|YP_002875077.1| hypothetical protein PFLU5582 [Pseudomonas fluorescens SBW25]
gi|387895976|ref|YP_006326273.1| protein kinase YeaG [Pseudomonas fluorescens A506]
gi|388468029|ref|ZP_10142239.1| protein kinase YeaG [Pseudomonas synxantha BG33R]
gi|423693912|ref|ZP_17668432.1| protein kinase YeaG [Pseudomonas fluorescens SS101]
gi|229364824|emb|CAY52855.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
gi|387164317|gb|AFJ59516.1| protein kinase YeaG [Pseudomonas fluorescens A506]
gi|387999003|gb|EIK60332.1| protein kinase YeaG [Pseudomonas fluorescens SS101]
gi|388011609|gb|EIK72796.1| protein kinase YeaG [Pseudomonas synxantha BG33R]
Length = 640
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|398937169|ref|ZP_10667208.1| putative Ser protein kinase [Pseudomonas sp. GM41(2012)]
gi|398167152|gb|EJM55232.1| putative Ser protein kinase [Pseudomonas sp. GM41(2012)]
Length = 640
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|398981217|ref|ZP_10689401.1| putative Ser protein kinase [Pseudomonas sp. GM25]
gi|398133935|gb|EJM23116.1| putative Ser protein kinase [Pseudomonas sp. GM25]
Length = 640
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|312963423|ref|ZP_07777905.1| serine protein kinase [Pseudomonas fluorescens WH6]
gi|311282229|gb|EFQ60828.1| serine protein kinase [Pseudomonas fluorescens WH6]
Length = 640
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|134295671|ref|YP_001119406.1| putative serine protein kinase PrkA [Burkholderia vietnamiensis G4]
gi|387902197|ref|YP_006332536.1| Serine protein kinase [Burkholderia sp. KJ006]
gi|134138828|gb|ABO54571.1| putative serine protein kinase, PrkA [Burkholderia vietnamiensis
G4]
gi|387577089|gb|AFJ85805.1| Serine protein kinase [Burkholderia sp. KJ006]
Length = 640
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|407368269|ref|ZP_11114801.1| PrkA family serine protein kinase [Pseudomonas mandelii JR-1]
Length = 640
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|402700971|ref|ZP_10848950.1| PrkA family serine protein kinase [Pseudomonas fragi A22]
Length = 640
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IP+ S S + T+ L++ D ++KL+
Sbjct: 162 GIPKRYLSTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|398866841|ref|ZP_10622315.1| putative Ser protein kinase [Pseudomonas sp. GM78]
gi|398238854|gb|EJN24575.1| putative Ser protein kinase [Pseudomonas sp. GM78]
Length = 640
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLMERVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|167587252|ref|ZP_02379640.1| putative serine protein kinase, PrkA [Burkholderia ubonensis Bu]
Length = 640
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|440737967|ref|ZP_20917517.1| PrkA family serine protein kinase [Pseudomonas fluorescens
BRIP34879]
gi|447918649|ref|YP_007399217.1| PrkA family serine protein kinase [Pseudomonas poae RE*1-1-14]
gi|440381542|gb|ELQ18069.1| PrkA family serine protein kinase [Pseudomonas fluorescens
BRIP34879]
gi|445202512|gb|AGE27721.1| PrkA family serine protein kinase [Pseudomonas poae RE*1-1-14]
Length = 640
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|330816803|ref|YP_004360508.1| Protein kinase [Burkholderia gladioli BSR3]
gi|327369196|gb|AEA60552.1| Protein kinase [Burkholderia gladioli BSR3]
Length = 640
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSLKGSPVNESPLGLFDYDEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
>gi|303234006|ref|ZP_07320655.1| ABC transporter, ATP-binding protein [Finegoldia magna BVS033A4]
gi|302494931|gb|EFL54688.1| ABC transporter, ATP-binding protein [Finegoldia magna BVS033A4]
Length = 579
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 35 GDDEGSRDSWDSLVDQRRRDAVFREVLQSYDQLRTRIGSLTDAKNKILSYTPGAWIENVG 94
GD E + S + D + D + + D + ++ + KN +Y ++NV
Sbjct: 311 GDMEQAYASASHIFDIMKLDTI-----EKSDGVIDKLEGNIEFKNVYFAYDKNDVLKNVS 365
Query: 95 GMTLSDYDVPKTTSLLLIGPKGSGKSSLVNRISKVFE 131
+ +PK+TS +G GSGKS+++N I K ++
Sbjct: 366 ------FKIPKSTSAAFVGTTGSGKSTILNLILKFYD 396
>gi|408479341|ref|ZP_11185560.1| PrkA family serine protein kinase [Pseudomonas sp. R81]
Length = 640
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIEKVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|317476632|ref|ZP_07935877.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA]
gi|316907228|gb|EFV28937.1| phosphate ABC transporter [Bacteroides eggerthii 1_2_48FAA]
Length = 254
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 104/276 (37%), Gaps = 57/276 (20%)
Query: 74 LTDAKNKILSYTPGAWIENVGGMTLSDYDVPKTTSLLLIGPKGSGKSS---LVNRISKVF 130
+ D NKI + W N + D+ + + + IGP G GKS+ L+NR++ +
Sbjct: 1 MNDVMNKIETRDVNFWYGNFHALKGISMDIAEKSVVAFIGPSGCGKSTFLRLLNRMNDLI 60
Query: 131 ENDKFASE---RAQVTYNSSV-------GDGTYFLQEYTIPRGSNSFSLYDTR--SLSDD 178
+ + E Q Y V G F + P+ Y R ++D
Sbjct: 61 PDTRLTGEVLIDGQDIYKKGVQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVTDS 120
Query: 179 ASDNINMIKLWIMEGVRHGELVIRRSDS--------SSLRNRMRCKAHKIGCEPSVIRKV 230
A I+ + E +R L D S + + C A + PSV+ +
Sbjct: 121 A-----FIRRRVEEALRGAALWDEVKDKLKVSAYALSGGQQQRLCIARAMAVSPSVLL-M 174
Query: 231 NFVIFVVDGLAVLKSMEGDSDVEKQYNQIVATTFNCPYLSFRDDKPVVVVTHGDLLSLTD 290
+ +D ++ K E +++KQY +V+VTH ++
Sbjct: 175 DEPASALDPISTAKVEELIHELKKQYT-------------------IVIVTH----NMQQ 211
Query: 291 RARIRT-----YLGELLGIPPAKQIFDIPESSDPEN 321
AR+ Y+GE++ K+IF P+ + +N
Sbjct: 212 AARVSDSTAFFYMGEMVEFGDTKKIFTNPDKVETQN 247
>gi|404398419|ref|ZP_10990003.1| PrkA family serine protein kinase [Pseudomonas fuscovaginae
UPB0736]
Length = 640
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSSL ++ ++ E F + + + S +G DG +++
Sbjct: 102 KKQILYLLGPVGGGKSSLAEKLKQLIERVPFYAIKGSPVFESPLGLFNATEDGAILEEDF 161
Query: 159 TIPRG--SNSFSLYDTRSLSDDASD--NINMIKLW 189
IPR + S + T+ L++ D ++KL+
Sbjct: 162 GIPRRYLNTIMSPWATKRLAEFGGDISQFRVVKLY 196
>gi|344237474|gb|EGV93577.1| Interferon-induced protein 44 [Cricetulus griseus]
Length = 396
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 109 LLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG---DGTY-FLQEYTIPRGS 164
+LL+GP G+GKSS VN + VF R +T+ + VG +G + Y + GS
Sbjct: 154 ILLLGPTGAGKSSFVNSVKSVF--------RGSITHQALVGCDVNGVSDKFRTYPVTYGS 205
Query: 165 NSFS----LYDTRSLSDDASDNINMIKLWIMEG 193
+ F L D+ LS A +++ I +I++G
Sbjct: 206 DGFPLPFVLCDSMGLSQKAGLHVDDID-FILKG 237
>gi|187924238|ref|YP_001895880.1| serine protein kinase PrkA [Burkholderia phytofirmans PsJN]
gi|187715432|gb|ACD16656.1| putative serine protein kinase, PrkA [Burkholderia phytofirmans
PsJN]
Length = 640
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 105 KTTSLLLIGPKGSGKSSLVNRISKVFENDKFASERAQVTYNSSVG------DGTYFLQEY 158
K L L+GP G GKSS+ R+ ++ E F S + S +G DG ++Y
Sbjct: 102 KKQILYLLGPVGGGKSSIAERLKQLMERVPFYSIKGSPVNESPLGLFDYEEDGPILEEQY 161
Query: 159 TIPR 162
IPR
Sbjct: 162 GIPR 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,519,437,255
Number of Sequences: 23463169
Number of extensions: 226792629
Number of successful extensions: 986548
Number of sequences better than 100.0: 381
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 314
Number of HSP's that attempted gapping in prelim test: 986315
Number of HSP's gapped (non-prelim): 433
length of query: 350
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 207
effective length of database: 9,003,962,200
effective search space: 1863820175400
effective search space used: 1863820175400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)