Query 018834
Match_columns 350
No_of_seqs 241 out of 2524
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 04:26:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018834.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018834hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1684 Enoyl-CoA hydratase [L 100.0 3E-69 6.4E-74 494.6 27.0 314 27-343 31-347 (401)
2 PLN02851 3-hydroxyisobutyryl-C 100.0 1.7E-67 3.8E-72 508.9 35.4 320 11-340 26-345 (407)
3 PLN02157 3-hydroxyisobutyryl-C 100.0 1.4E-66 3E-71 502.8 35.1 305 33-340 36-340 (401)
4 PLN02988 3-hydroxyisobutyryl-C 100.0 2.6E-66 5.7E-71 499.4 35.1 303 35-340 10-312 (381)
5 PLN02874 3-hydroxyisobutyryl-C 100.0 1.7E-58 3.8E-63 446.7 35.4 308 31-343 8-318 (379)
6 PRK05617 3-hydroxyisobutyryl-C 100.0 6.8E-55 1.5E-59 416.8 31.8 302 34-344 3-306 (342)
7 PRK05980 enoyl-CoA hydratase; 100.0 1.5E-50 3.3E-55 374.3 26.7 252 34-285 3-259 (260)
8 PRK09076 enoyl-CoA hydratase; 100.0 1E-49 2.2E-54 368.3 26.8 250 33-287 2-256 (258)
9 PRK09120 p-hydroxycinnamoyl Co 100.0 1.1E-49 2.4E-54 371.1 25.7 253 31-283 5-264 (275)
10 PRK06127 enoyl-CoA hydratase; 100.0 1.7E-49 3.7E-54 368.9 26.7 254 32-287 9-267 (269)
11 PRK08150 enoyl-CoA hydratase; 100.0 1.7E-49 3.7E-54 366.0 26.0 249 34-288 2-254 (255)
12 PRK07327 enoyl-CoA hydratase; 100.0 1.9E-49 4.2E-54 368.3 26.5 255 32-288 9-267 (268)
13 PRK06142 enoyl-CoA hydratase; 100.0 1.6E-49 3.4E-54 369.8 25.8 254 34-287 6-271 (272)
14 PRK05862 enoyl-CoA hydratase; 100.0 2E-49 4.4E-54 366.2 25.0 248 34-287 4-255 (257)
15 TIGR03210 badI 2-ketocyclohexa 100.0 2.8E-49 6.1E-54 364.9 25.3 248 34-286 2-253 (256)
16 PRK07657 enoyl-CoA hydratase; 100.0 4.1E-49 8.9E-54 364.7 26.3 250 34-287 3-258 (260)
17 PRK09674 enoyl-CoA hydratase-i 100.0 3.1E-49 6.8E-54 364.4 25.2 248 34-287 2-253 (255)
18 PRK09245 enoyl-CoA hydratase; 100.0 4.2E-49 9.1E-54 365.9 26.1 254 33-286 2-263 (266)
19 PRK05809 3-hydroxybutyryl-CoA 100.0 5.3E-49 1.1E-53 364.1 26.3 251 33-287 3-258 (260)
20 PLN02664 enoyl-CoA hydratase/d 100.0 3.8E-49 8.3E-54 367.6 25.6 252 35-286 9-272 (275)
21 PRK07511 enoyl-CoA hydratase; 100.0 5.9E-49 1.3E-53 363.7 26.6 252 34-286 3-258 (260)
22 TIGR02280 PaaB1 phenylacetate 100.0 5E-49 1.1E-53 363.4 25.5 250 36-287 1-254 (256)
23 PRK07658 enoyl-CoA hydratase; 100.0 5E-49 1.1E-53 363.7 25.5 249 35-287 3-255 (257)
24 PRK08139 enoyl-CoA hydratase; 100.0 8E-49 1.7E-53 363.7 26.8 250 33-286 10-263 (266)
25 PRK07799 enoyl-CoA hydratase; 100.0 6.5E-49 1.4E-53 364.0 26.1 252 33-287 4-261 (263)
26 PRK08258 enoyl-CoA hydratase; 100.0 8.7E-49 1.9E-53 365.6 27.1 253 35-287 18-275 (277)
27 PRK08140 enoyl-CoA hydratase; 100.0 6.6E-49 1.4E-53 363.8 26.0 252 34-286 4-259 (262)
28 PRK06563 enoyl-CoA hydratase; 100.0 4.7E-49 1E-53 363.3 24.5 248 36-287 1-253 (255)
29 PRK06144 enoyl-CoA hydratase; 100.0 8.6E-49 1.9E-53 362.8 26.2 252 29-286 3-259 (262)
30 TIGR01929 menB naphthoate synt 100.0 7.4E-49 1.6E-53 362.7 25.3 250 35-287 3-257 (259)
31 PRK07260 enoyl-CoA hydratase; 100.0 6.8E-49 1.5E-53 362.3 24.9 249 34-282 2-254 (255)
32 PRK08252 enoyl-CoA hydratase; 100.0 1.3E-48 2.9E-53 360.1 25.7 247 33-287 2-252 (254)
33 PRK07468 enoyl-CoA hydratase; 100.0 1.5E-48 3.2E-53 361.4 25.9 253 33-287 3-260 (262)
34 PRK08138 enoyl-CoA hydratase; 100.0 1.8E-48 3.8E-53 360.6 26.0 248 33-286 6-258 (261)
35 PLN02600 enoyl-CoA hydratase 100.0 1.3E-48 2.8E-53 359.4 25.0 243 41-287 2-249 (251)
36 PRK05981 enoyl-CoA hydratase; 100.0 1.5E-48 3.3E-53 362.1 25.6 255 33-287 3-264 (266)
37 PRK05995 enoyl-CoA hydratase; 100.0 1.7E-48 3.6E-53 361.1 25.6 253 33-287 3-260 (262)
38 KOG1680 Enoyl-CoA hydratase [L 100.0 1.7E-49 3.6E-54 354.5 18.1 249 33-287 36-288 (290)
39 COG1024 CaiD Enoyl-CoA hydrata 100.0 2.1E-48 4.6E-53 359.4 25.7 248 33-285 4-256 (257)
40 PRK06143 enoyl-CoA hydratase; 100.0 1.8E-48 4E-53 359.3 25.2 244 34-282 6-255 (256)
41 PRK05674 gamma-carboxygeranoyl 100.0 1.4E-48 3.1E-53 361.8 24.5 253 33-287 4-262 (265)
42 PRK07659 enoyl-CoA hydratase; 100.0 2.2E-48 4.9E-53 359.7 25.1 249 34-287 6-258 (260)
43 PRK06494 enoyl-CoA hydratase; 100.0 2.8E-48 6.1E-53 358.9 25.3 248 33-287 3-257 (259)
44 PRK05864 enoyl-CoA hydratase; 100.0 2.8E-48 6E-53 362.0 25.0 257 30-286 5-272 (276)
45 PRK08260 enoyl-CoA hydratase; 100.0 4.3E-48 9.3E-53 364.1 25.7 255 34-288 4-277 (296)
46 PRK06688 enoyl-CoA hydratase; 100.0 4.8E-48 1E-52 357.5 25.1 248 34-286 5-256 (259)
47 PRK03580 carnitinyl-CoA dehydr 100.0 6.2E-48 1.3E-52 357.0 25.3 248 34-287 3-259 (261)
48 PRK07509 enoyl-CoA hydratase; 100.0 7E-48 1.5E-52 357.0 25.4 253 32-286 1-260 (262)
49 PRK06023 enoyl-CoA hydratase; 100.0 3.8E-48 8.3E-53 356.4 23.3 242 34-280 3-250 (251)
50 PLN02888 enoyl-CoA hydratase 100.0 8E-48 1.7E-52 356.7 25.4 249 31-286 6-261 (265)
51 PRK07396 dihydroxynaphthoic ac 100.0 1E-47 2.2E-52 357.6 25.1 251 33-287 12-267 (273)
52 PRK05870 enoyl-CoA hydratase; 100.0 5.7E-48 1.2E-52 354.9 22.8 242 33-280 2-248 (249)
53 PRK06210 enoyl-CoA hydratase; 100.0 8.6E-48 1.9E-52 358.2 24.3 254 33-286 4-269 (272)
54 PRK11423 methylmalonyl-CoA dec 100.0 2E-47 4.3E-52 353.4 25.5 249 33-287 3-259 (261)
55 PRK08259 enoyl-CoA hydratase; 100.0 9.8E-48 2.1E-52 354.1 23.3 244 33-282 2-248 (254)
56 PRK06072 enoyl-CoA hydratase; 100.0 3.3E-47 7.1E-52 349.5 25.8 243 36-287 2-246 (248)
57 PRK06495 enoyl-CoA hydratase; 100.0 3.6E-47 7.7E-52 351.2 25.0 250 32-287 2-255 (257)
58 TIGR03189 dienoyl_CoA_hyt cycl 100.0 4.6E-47 9.9E-52 349.0 25.4 242 36-287 3-249 (251)
59 PRK07854 enoyl-CoA hydratase; 100.0 4.3E-47 9.3E-52 347.7 25.0 237 36-286 2-240 (243)
60 PRK07827 enoyl-CoA hydratase; 100.0 6.2E-47 1.4E-51 350.2 26.2 251 33-286 5-258 (260)
61 PLN02921 naphthoate synthase 100.0 4.5E-47 9.8E-52 359.9 25.7 252 32-287 63-321 (327)
62 PF00378 ECH: Enoyl-CoA hydrat 100.0 1E-47 2.2E-52 352.6 20.2 241 37-281 1-245 (245)
63 PRK08321 naphthoate synthase; 100.0 9.5E-47 2.1E-51 355.5 24.7 255 33-287 22-296 (302)
64 PRK07110 polyketide biosynthes 100.0 1.3E-46 2.8E-51 345.7 24.3 240 33-279 4-246 (249)
65 PRK06190 enoyl-CoA hydratase; 100.0 2.3E-46 5E-51 345.4 25.9 212 33-250 3-216 (258)
66 PRK07938 enoyl-CoA hydratase; 100.0 1.4E-46 3.1E-51 345.4 24.4 239 39-284 7-249 (249)
67 PLN03214 probable enoyl-CoA hy 100.0 4E-46 8.6E-51 347.4 24.4 249 31-282 8-264 (278)
68 PRK07112 polyketide biosynthes 100.0 5.5E-46 1.2E-50 342.7 24.4 249 33-287 3-253 (255)
69 PRK12478 enoyl-CoA hydratase; 100.0 2.7E-46 5.9E-51 351.6 21.8 250 34-287 5-279 (298)
70 PRK05869 enoyl-CoA hydratase; 100.0 6.2E-46 1.3E-50 335.3 21.5 209 34-247 3-218 (222)
71 PRK08788 enoyl-CoA hydratase; 100.0 2.5E-44 5.4E-49 335.3 25.2 219 26-245 9-240 (287)
72 PRK08290 enoyl-CoA hydratase; 100.0 1.8E-44 4E-49 337.8 23.9 211 33-245 3-233 (288)
73 PRK11730 fadB multifunctional 100.0 3E-44 6.6E-49 372.8 25.4 279 35-347 7-289 (715)
74 PRK08272 enoyl-CoA hydratase; 100.0 8.7E-44 1.9E-48 335.7 23.4 214 32-248 8-244 (302)
75 TIGR03222 benzo_boxC benzoyl-C 100.0 1.2E-43 2.6E-48 354.5 24.5 248 36-287 260-542 (546)
76 TIGR02437 FadB fatty oxidation 100.0 1.5E-43 3.3E-48 366.9 23.6 281 35-348 7-290 (714)
77 TIGR02441 fa_ox_alpha_mit fatt 100.0 2.1E-43 4.5E-48 366.7 24.3 290 34-348 13-314 (737)
78 PRK08184 benzoyl-CoA-dihydrodi 100.0 3.6E-43 7.7E-48 352.2 23.6 252 33-288 259-547 (550)
79 TIGR03200 dearomat_oah 6-oxocy 100.0 2.4E-42 5.1E-47 325.4 24.8 203 44-247 38-257 (360)
80 PRK06213 enoyl-CoA hydratase; 100.0 1.1E-42 2.4E-47 316.0 21.3 206 34-247 3-211 (229)
81 KOG1679 Enoyl-CoA hydratase [L 100.0 9.2E-43 2E-47 299.0 17.3 248 33-287 26-289 (291)
82 TIGR02440 FadJ fatty oxidation 100.0 4.6E-42 1E-46 355.8 25.5 271 38-348 5-282 (699)
83 PRK11154 fadJ multifunctional 100.0 1.9E-41 4.1E-46 351.9 27.1 274 34-347 5-286 (708)
84 PLN02267 enoyl-CoA hydratase/i 100.0 3E-41 6.5E-46 308.1 20.5 207 36-246 2-217 (239)
85 KOG1681 Enoyl-CoA isomerase [L 100.0 3.7E-41 8.1E-46 291.6 14.2 244 41-284 29-286 (292)
86 cd06558 crotonase-like Crotona 100.0 3E-40 6.6E-45 292.4 19.3 190 36-227 1-191 (195)
87 TIGR03222 benzo_boxC benzoyl-C 100.0 1.1E-38 2.5E-43 318.7 20.6 202 32-234 9-230 (546)
88 COG0447 MenB Dihydroxynaphthoi 100.0 8.1E-39 1.7E-43 275.2 12.7 250 32-286 16-275 (282)
89 PRK08184 benzoyl-CoA-dihydrodi 100.0 1.5E-37 3.2E-42 311.7 20.4 203 31-234 12-234 (550)
90 KOG0016 Enoyl-CoA hydratase/is 100.0 2.1E-37 4.6E-42 274.3 18.7 249 33-281 6-262 (266)
91 KOG1682 Enoyl-CoA isomerase [L 100.0 5.9E-37 1.3E-41 261.3 18.9 254 30-287 28-285 (287)
92 cd07014 S49_SppA Signal peptid 99.8 4.6E-19 1E-23 154.8 9.5 140 61-220 22-172 (177)
93 cd07020 Clp_protease_NfeD_1 No 99.8 3.3E-18 7.2E-23 150.6 11.0 145 45-218 2-166 (187)
94 cd07019 S49_SppA_1 Signal pept 99.6 2.1E-15 4.6E-20 135.3 10.8 88 57-164 17-104 (211)
95 PF13766 ECH_C: 2-enoyl-CoA Hy 99.5 1.7E-14 3.6E-19 117.2 8.0 79 258-343 4-82 (118)
96 cd00394 Clp_protease_like Case 99.5 8.7E-14 1.9E-18 119.4 10.9 134 58-214 8-161 (161)
97 TIGR00705 SppA_67K signal pept 99.5 2.3E-13 5E-18 138.9 13.3 171 40-233 306-524 (584)
98 cd07022 S49_Sppa_36K_type Sign 99.5 6.7E-13 1.4E-17 119.4 14.5 95 50-165 13-108 (214)
99 cd07016 S14_ClpP_1 Caseinolyti 99.4 4.8E-13 1E-17 114.8 9.9 128 61-214 15-160 (160)
100 cd07023 S49_Sppa_N_C Signal pe 99.4 1.8E-12 3.8E-17 116.1 10.9 85 60-164 16-100 (208)
101 TIGR00706 SppA_dom signal pept 99.3 1.3E-11 2.9E-16 110.3 12.2 93 44-165 2-96 (207)
102 cd07018 S49_SppA_67K_type Sign 99.2 1.2E-10 2.5E-15 105.4 10.5 89 57-166 25-113 (222)
103 cd07021 Clp_protease_NfeD_like 99.2 2.1E-10 4.6E-15 99.9 10.6 140 45-217 2-171 (178)
104 cd07015 Clp_protease_NfeD Nodu 98.6 6.7E-07 1.4E-11 77.4 12.0 137 57-217 9-165 (172)
105 cd07013 S14_ClpP Caseinolytic 98.6 6.4E-07 1.4E-11 77.0 10.5 132 58-214 9-162 (162)
106 PRK10949 protease 4; Provision 98.5 1.5E-06 3.3E-11 89.3 14.2 165 41-231 325-540 (618)
107 PRK00277 clpP ATP-dependent Cl 98.5 7.9E-07 1.7E-11 79.0 9.2 135 57-217 39-196 (200)
108 KOG1683 Hydroxyacyl-CoA dehydr 98.4 6.7E-07 1.5E-11 84.4 8.4 168 43-217 66-240 (380)
109 PRK12319 acetyl-CoA carboxylas 98.3 9.4E-05 2E-09 68.0 18.2 138 55-218 76-215 (256)
110 COG0616 SppA Periplasmic serin 98.2 1.5E-05 3.2E-10 76.0 12.7 82 62-164 81-162 (317)
111 PRK12553 ATP-dependent Clp pro 98.2 6E-06 1.3E-10 73.8 9.5 143 45-217 36-202 (207)
112 cd07017 S14_ClpP_2 Caseinolyti 98.2 7.8E-06 1.7E-10 70.9 9.7 132 58-214 18-171 (171)
113 PRK14512 ATP-dependent Clp pro 98.2 2.1E-05 4.5E-10 69.7 11.0 137 58-217 32-188 (197)
114 CHL00198 accA acetyl-CoA carbo 98.1 0.00012 2.7E-09 69.0 15.4 139 55-217 132-270 (322)
115 PF00574 CLP_protease: Clp pro 98.1 1.1E-05 2.4E-10 70.6 7.2 142 46-217 18-181 (182)
116 TIGR00513 accA acetyl-CoA carb 98.0 0.00089 1.9E-08 63.2 19.7 136 55-217 129-267 (316)
117 PRK05724 acetyl-CoA carboxylas 98.0 0.00076 1.6E-08 63.7 18.3 139 55-217 129-267 (319)
118 TIGR00493 clpP ATP-dependent C 98.0 0.00011 2.3E-09 64.9 11.5 144 45-216 27-190 (191)
119 PRK11778 putative inner membra 98.0 4.1E-05 8.8E-10 72.7 9.3 101 41-165 89-189 (330)
120 CHL00028 clpP ATP-dependent Cl 97.9 6.5E-05 1.4E-09 66.7 9.8 144 46-218 32-197 (200)
121 PLN03230 acetyl-coenzyme A car 97.9 0.0015 3.3E-08 63.3 19.6 136 56-217 200-337 (431)
122 PLN03229 acetyl-coenzyme A car 97.9 0.0004 8.7E-09 71.4 16.1 139 55-217 220-358 (762)
123 TIGR03134 malonate_gamma malon 97.8 0.0033 7.2E-08 57.2 18.8 154 41-219 30-191 (238)
124 TIGR03133 malonate_beta malona 97.7 0.00097 2.1E-08 61.8 14.4 150 44-219 61-219 (274)
125 PRK12551 ATP-dependent Clp pro 97.7 0.00049 1.1E-08 60.9 11.8 138 58-218 34-191 (196)
126 PRK14514 ATP-dependent Clp pro 97.7 0.00072 1.5E-08 60.8 11.8 135 57-217 62-219 (221)
127 PRK14513 ATP-dependent Clp pro 97.6 0.00098 2.1E-08 59.1 11.7 136 57-219 35-194 (201)
128 TIGR00705 SppA_67K signal pept 97.6 0.00096 2.1E-08 68.7 12.7 85 61-165 76-160 (584)
129 PRK07189 malonate decarboxylas 97.5 0.0014 3E-08 61.5 11.9 150 44-219 70-228 (301)
130 PF01972 SDH_sah: Serine dehyd 97.5 0.00053 1.1E-08 62.8 8.7 94 56-175 70-163 (285)
131 PRK05654 acetyl-CoA carboxylas 97.4 0.005 1.1E-07 57.8 14.4 153 40-224 118-273 (292)
132 PF01343 Peptidase_S49: Peptid 97.2 0.00037 8.1E-09 59.3 4.4 99 127-228 3-148 (154)
133 COG0740 ClpP Protease subunit 97.2 0.003 6.5E-08 55.6 9.7 141 47-219 30-194 (200)
134 PRK12552 ATP-dependent Clp pro 97.1 0.0082 1.8E-07 54.0 12.0 140 57-217 48-214 (222)
135 TIGR00515 accD acetyl-CoA carb 97.1 0.017 3.8E-07 54.0 14.4 154 40-224 117-272 (285)
136 TIGR01117 mmdA methylmalonyl-C 97.0 0.026 5.7E-07 57.2 16.2 159 42-222 314-486 (512)
137 CHL00174 accD acetyl-CoA carbo 96.9 0.038 8.3E-07 51.7 14.7 148 44-227 135-289 (296)
138 PF01039 Carboxyl_trans: Carbo 96.8 0.023 4.9E-07 57.5 13.8 138 45-219 60-207 (493)
139 PRK10949 protease 4; Provision 96.8 0.0093 2E-07 61.8 10.4 85 61-165 95-179 (618)
140 PLN02820 3-methylcrotonyl-CoA 96.2 0.11 2.4E-06 53.2 14.2 146 41-219 127-281 (569)
141 COG1030 NfeD Membrane-bound se 96.2 0.12 2.5E-06 50.8 13.2 148 41-217 25-188 (436)
142 TIGR01117 mmdA methylmalonyl-C 96.1 0.11 2.3E-06 52.9 13.5 142 41-219 80-230 (512)
143 COG4799 Acetyl-CoA carboxylase 96.1 0.054 1.2E-06 54.4 11.1 196 48-279 97-310 (526)
144 PF01039 Carboxyl_trans: Carbo 95.0 0.27 5.8E-06 49.9 11.8 156 42-222 293-469 (493)
145 COG0825 AccA Acetyl-CoA carbox 94.9 0.027 5.8E-07 52.1 3.6 86 123-217 181-266 (317)
146 COG0777 AccD Acetyl-CoA carbox 94.1 1.1 2.4E-05 41.3 12.2 142 44-222 124-272 (294)
147 PLN02820 3-methylcrotonyl-CoA 93.0 3.4 7.5E-05 42.6 15.0 144 56-221 380-544 (569)
148 PRK08252 enoyl-CoA hydratase; 90.3 0.75 1.6E-05 42.3 6.4 53 290-345 185-237 (254)
149 PRK07658 enoyl-CoA hydratase; 90.1 0.71 1.5E-05 42.4 6.1 53 290-345 188-240 (257)
150 PRK05809 3-hydroxybutyryl-CoA 90.0 0.76 1.6E-05 42.4 6.1 52 290-344 191-242 (260)
151 PRK09674 enoyl-CoA hydratase-i 89.4 0.9 2E-05 41.8 6.1 52 290-344 186-237 (255)
152 COG4799 Acetyl-CoA carboxylase 89.0 7 0.00015 39.7 12.4 157 47-221 328-498 (526)
153 PRK06495 enoyl-CoA hydratase; 88.6 1.1 2.4E-05 41.2 6.2 51 291-344 189-239 (257)
154 PRK09076 enoyl-CoA hydratase; 88.5 1.3 2.7E-05 40.9 6.4 51 291-344 190-240 (258)
155 PLN02600 enoyl-CoA hydratase 88.2 1.2 2.7E-05 40.8 6.2 51 291-344 183-233 (251)
156 PRK07799 enoyl-CoA hydratase; 87.9 1.5 3.3E-05 40.4 6.6 51 292-345 196-246 (263)
157 PRK05980 enoyl-CoA hydratase; 87.1 1.4 3.1E-05 40.5 5.9 52 291-345 195-246 (260)
158 PRK06688 enoyl-CoA hydratase; 87.1 1.5 3.2E-05 40.4 6.0 51 291-344 191-241 (259)
159 PRK08139 enoyl-CoA hydratase; 86.7 1.9 4.1E-05 40.0 6.5 51 291-344 198-248 (266)
160 PRK05862 enoyl-CoA hydratase; 86.2 1.9 4.1E-05 39.6 6.2 51 292-345 190-240 (257)
161 PLN02664 enoyl-CoA hydratase/d 86.2 1.8 3.8E-05 40.3 6.0 51 291-344 207-257 (275)
162 PRK08150 enoyl-CoA hydratase; 85.5 2.1 4.5E-05 39.4 6.1 51 291-344 187-237 (255)
163 KOG0840 ATP-dependent Clp prot 85.5 7.2 0.00016 35.7 9.2 133 57-217 100-257 (275)
164 TIGR02280 PaaB1 phenylacetate 85.1 2.4 5.3E-05 38.9 6.4 52 291-345 188-239 (256)
165 PRK06494 enoyl-CoA hydratase; 85.0 2.6 5.7E-05 38.8 6.6 51 291-344 189-241 (259)
166 PRK07657 enoyl-CoA hydratase; 84.6 2.6 5.6E-05 38.8 6.3 51 291-344 192-242 (260)
167 PRK07938 enoyl-CoA hydratase; 84.6 2.7 5.9E-05 38.5 6.4 53 290-345 185-237 (249)
168 PRK07659 enoyl-CoA hydratase; 84.5 2.4 5.2E-05 39.0 6.0 51 291-344 192-242 (260)
169 PRK08258 enoyl-CoA hydratase; 83.8 2.9 6.3E-05 38.9 6.3 52 291-345 209-260 (277)
170 PRK07511 enoyl-CoA hydratase; 83.6 2.6 5.7E-05 38.8 5.9 49 294-345 196-244 (260)
171 PRK07509 enoyl-CoA hydratase; 83.4 3 6.6E-05 38.4 6.2 52 291-345 195-246 (262)
172 PRK06072 enoyl-CoA hydratase; 83.1 2.9 6.4E-05 38.2 6.0 51 291-344 180-230 (248)
173 PRK06142 enoyl-CoA hydratase; 83.1 3.2 6.9E-05 38.5 6.3 51 291-344 205-255 (272)
174 PRK06143 enoyl-CoA hydratase; 83.0 3.1 6.8E-05 38.2 6.1 51 291-344 194-244 (256)
175 PRK06563 enoyl-CoA hydratase; 82.9 3.6 7.7E-05 37.8 6.5 50 292-344 188-237 (255)
176 PRK08138 enoyl-CoA hydratase; 82.5 3.4 7.5E-05 38.0 6.2 49 294-345 196-244 (261)
177 PRK08140 enoyl-CoA hydratase; 81.9 3.7 8.1E-05 37.8 6.2 51 291-344 194-244 (262)
178 PRK07110 polyketide biosynthes 81.4 2.9 6.3E-05 38.3 5.3 51 292-345 190-240 (249)
179 PRK06210 enoyl-CoA hydratase; 80.8 4.1 9E-05 37.7 6.2 48 294-344 206-254 (272)
180 PRK07827 enoyl-CoA hydratase; 80.1 4.6 0.0001 37.1 6.2 52 291-345 193-244 (260)
181 PRK09245 enoyl-CoA hydratase; 79.8 4.8 0.0001 37.1 6.2 50 292-344 199-248 (266)
182 PRK06127 enoyl-CoA hydratase; 79.5 4.4 9.6E-05 37.5 5.9 50 292-344 202-251 (269)
183 PLN03214 probable enoyl-CoA hy 79.4 3 6.5E-05 38.9 4.7 51 291-344 203-253 (278)
184 PRK07468 enoyl-CoA hydratase; 79.0 4.7 0.0001 37.1 5.9 49 293-344 196-244 (262)
185 PRK05981 enoyl-CoA hydratase; 78.8 5 0.00011 37.0 6.0 52 291-345 198-249 (266)
186 PRK05617 3-hydroxyisobutyryl-C 78.3 5.2 0.00011 38.5 6.1 159 126-286 104-323 (342)
187 PRK08259 enoyl-CoA hydratase; 77.8 5.9 0.00013 36.4 6.1 47 291-340 188-234 (254)
188 PRK03580 carnitinyl-CoA dehydr 77.3 6.5 0.00014 36.2 6.2 51 291-344 189-243 (261)
189 PRK12478 enoyl-CoA hydratase; 76.6 4 8.7E-05 38.5 4.7 53 291-345 204-256 (298)
190 PRK07260 enoyl-CoA hydratase; 76.5 5.8 0.00013 36.4 5.7 52 291-345 193-244 (255)
191 PRK06190 enoyl-CoA hydratase; 75.9 7.8 0.00017 35.7 6.3 48 291-341 189-236 (258)
192 KOG0540 3-Methylcrotonyl-CoA c 75.6 28 0.0006 34.6 10.0 150 46-222 352-512 (536)
193 PRK05995 enoyl-CoA hydratase; 74.2 7.4 0.00016 35.8 5.8 51 291-344 193-244 (262)
194 KOG1680 Enoyl-CoA hydratase [L 74.1 5.5 0.00012 36.9 4.7 48 293-343 224-271 (290)
195 PRK07112 polyketide biosynthes 74.0 6.9 0.00015 35.9 5.5 51 291-345 188-238 (255)
196 PRK05870 enoyl-CoA hydratase; 71.8 11 0.00024 34.4 6.3 53 291-345 188-240 (249)
197 PF00378 ECH: Enoyl-CoA hydrat 71.6 5.3 0.00011 36.3 4.1 51 291-344 185-235 (245)
198 PRK05674 gamma-carboxygeranoyl 67.4 12 0.00026 34.5 5.6 50 292-344 196-246 (265)
199 PRK09120 p-hydroxycinnamoyl Co 66.7 13 0.00029 34.5 5.7 49 291-342 199-249 (275)
200 PLN02888 enoyl-CoA hydratase 66.7 15 0.00032 34.0 6.0 46 291-339 194-239 (265)
201 PF02601 Exonuc_VII_L: Exonucl 66.6 12 0.00027 35.4 5.6 79 61-161 55-136 (319)
202 PRK06023 enoyl-CoA hydratase; 66.4 12 0.00026 34.1 5.4 51 291-345 192-242 (251)
203 PRK07854 enoyl-CoA hydratase; 65.9 15 0.00032 33.5 5.8 48 292-344 178-225 (243)
204 COG0074 SucD Succinyl-CoA synt 65.0 21 0.00046 33.3 6.4 74 40-142 144-240 (293)
205 TIGR03189 dienoyl_CoA_hyt cycl 62.1 21 0.00045 32.7 6.0 47 295-344 186-233 (251)
206 PLN02874 3-hydroxyisobutyryl-C 61.3 12 0.00027 36.5 4.6 160 126-287 109-337 (379)
207 TIGR00237 xseA exodeoxyribonuc 60.8 18 0.00039 36.1 5.7 77 60-161 169-248 (432)
208 PF13607 Succ_CoA_lig: Succiny 58.9 27 0.00058 29.0 5.6 52 65-141 41-92 (138)
209 PRK11423 methylmalonyl-CoA dec 57.8 25 0.00055 32.3 5.8 54 290-345 190-244 (261)
210 PTZ00187 succinyl-CoA syntheta 56.7 31 0.00068 32.9 6.3 15 128-142 250-264 (317)
211 smart00250 PLEC Plectin repeat 56.3 9.7 0.00021 23.9 2.0 19 195-213 17-35 (38)
212 COG1570 XseA Exonuclease VII, 53.9 26 0.00055 34.9 5.3 73 63-160 178-253 (440)
213 PRK05864 enoyl-CoA hydratase; 51.6 42 0.00092 31.1 6.3 39 292-333 206-245 (276)
214 TIGR01929 menB naphthoate synt 50.7 40 0.00087 30.9 5.9 51 291-345 192-242 (259)
215 PRK07396 dihydroxynaphthoic ac 48.4 47 0.001 30.7 6.1 50 291-344 202-251 (273)
216 PRK06213 enoyl-CoA hydratase; 48.1 17 0.00036 32.7 2.9 42 291-335 187-228 (229)
217 PRK14053 methyltransferase; Pr 47.4 27 0.00059 30.4 3.8 68 35-102 15-89 (194)
218 PF00549 Ligase_CoA: CoA-ligas 46.4 29 0.00063 29.4 3.9 62 65-143 60-121 (153)
219 PRK00286 xseA exodeoxyribonucl 46.3 36 0.00079 33.8 5.3 38 119-161 213-253 (438)
220 PRK08321 naphthoate synthase; 45.9 43 0.00093 31.6 5.4 50 291-344 231-280 (302)
221 PLN02522 ATP citrate (pro-S)-l 45.7 48 0.001 34.6 6.1 14 129-142 249-262 (608)
222 PF00681 Plectin: Plectin repe 45.3 7.2 0.00016 25.6 0.1 19 195-213 17-35 (45)
223 COG1024 CaiD Enoyl-CoA hydrata 44.2 54 0.0012 29.9 5.7 41 302-345 204-244 (257)
224 TIGR00377 ant_ant_sig anti-ant 43.1 96 0.0021 23.6 6.3 49 35-88 4-52 (108)
225 PF13766 ECH_C: 2-enoyl-CoA Hy 42.3 99 0.0021 24.8 6.3 55 225-279 35-91 (118)
226 TIGR01111 mtrA N5-methyltetrah 41.7 36 0.00079 30.6 3.9 69 34-102 17-96 (238)
227 PRK00964 tetrahydromethanopter 41.5 36 0.00078 30.6 3.8 69 34-102 17-96 (225)
228 PF04208 MtrA: Tetrahydrometha 40.8 34 0.00073 29.5 3.4 68 34-101 14-91 (176)
229 cd07560 Peptidase_S41_CPP C-te 36.4 54 0.0012 29.2 4.3 95 44-149 50-150 (211)
230 PF01740 STAS: STAS domain; I 33.8 1.8E+02 0.0038 22.5 6.5 48 36-88 2-57 (117)
231 PRK06144 enoyl-CoA hydratase; 32.6 79 0.0017 29.0 4.9 46 291-343 198-243 (262)
232 TIGR02886 spore_II_AA anti-sig 31.9 2.3E+02 0.0049 21.5 6.8 47 37-88 2-48 (106)
233 PF06258 Mito_fiss_Elm1: Mitoc 31.0 4.7E+02 0.01 24.8 10.0 140 30-177 95-259 (311)
234 PLN02921 naphthoate synthase 30.7 1.1E+02 0.0024 29.2 5.7 48 292-343 257-304 (327)
235 KOG0595 Serine/threonine-prote 29.7 70 0.0015 31.5 4.0 37 91-127 90-126 (429)
236 PF14842 FliG_N: FliG N-termin 29.7 74 0.0016 25.0 3.6 85 190-281 12-100 (108)
237 TIGR00225 prc C-terminal pepti 27.3 75 0.0016 30.3 3.9 94 43-151 152-255 (334)
238 KOG1255 Succinyl-CoA synthetas 26.5 78 0.0017 29.0 3.5 56 66-142 219-274 (329)
239 PLN00125 Succinyl-CoA ligase [ 26.4 1.5E+02 0.0032 28.1 5.6 13 130-142 233-245 (300)
240 PLN00049 carboxyl-terminal pro 25.6 1E+02 0.0023 30.1 4.6 98 42-149 194-298 (389)
241 PF03464 eRF1_2: eRF1 domain 2 24.4 1.3E+02 0.0028 24.5 4.3 45 44-88 25-83 (133)
242 PRK07327 enoyl-CoA hydratase; 24.4 1.5E+02 0.0033 27.2 5.2 42 291-332 201-242 (268)
243 PRK08260 enoyl-CoA hydratase; 24.3 2E+02 0.0043 26.9 6.1 50 293-344 210-260 (296)
244 cd03225 ABC_cobalt_CbiO_domain 24.3 1.8E+02 0.0039 25.2 5.6 38 45-85 154-191 (211)
245 KOG0610 Putative serine/threon 24.0 1.6E+02 0.0034 29.3 5.3 65 91-155 158-232 (459)
246 cd03255 ABC_MJ0796_Lo1CDE_FtsE 23.9 1.8E+02 0.0039 25.3 5.5 39 45-85 160-198 (218)
247 TIGR02717 AcCoA-syn-alpha acet 23.8 1.8E+02 0.0039 29.1 5.9 53 65-142 190-242 (447)
248 COG1126 GlnQ ABC-type polar am 23.3 2E+02 0.0044 26.1 5.5 39 46-87 157-195 (240)
249 PRK08788 enoyl-CoA hydratase; 22.5 2.5E+02 0.0055 26.2 6.4 47 293-343 218-264 (287)
250 PRK06091 membrane protein FdrA 22.4 2.4E+02 0.0051 29.2 6.4 23 121-143 270-292 (555)
251 smart00870 Asparaginase Aspara 22.2 3.2E+02 0.007 25.9 7.1 32 56-87 55-87 (323)
252 cd04241 AAK_FomA-like AAK_FomA 22.1 1.7E+02 0.0036 26.5 5.0 38 50-90 12-49 (252)
253 cd03216 ABC_Carb_Monos_I This 22.1 2.4E+02 0.0053 23.5 5.7 37 45-84 102-138 (163)
254 TIGR03210 badI 2-ketocyclohexa 21.8 1.7E+02 0.0037 26.7 5.0 49 291-344 189-238 (256)
255 cd03267 ABC_NatA_like Similar 21.7 2.3E+02 0.005 25.2 5.8 39 45-86 173-211 (236)
256 TIGR02211 LolD_lipo_ex lipopro 21.3 2.2E+02 0.0047 24.9 5.5 38 45-84 161-198 (221)
257 TIGR02153 gatD_arch glutamyl-t 20.3 3.4E+02 0.0074 26.8 7.0 33 56-88 118-150 (404)
258 PRK10584 putative ABC transpor 20.2 2.4E+02 0.0051 24.8 5.5 38 45-84 166-203 (228)
No 1
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=3e-69 Score=494.58 Aligned_cols=314 Identities=48% Similarity=0.757 Sum_probs=289.3
Q ss_pred CcccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhh
Q 018834 27 SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMN 105 (350)
Q Consensus 27 ~~~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~ 105 (350)
....+..+.|+++.++..++||||||+++||||.+|+..+...|..|+.++.+++||+.|++ ++||||+|++.......
T Consensus 31 ~~~~~~~~~VL~e~~~~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~ 110 (401)
T KOG1684|consen 31 SVSTDSKDQVLVEGKGCARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIK 110 (401)
T ss_pred ccccccCCceEEecCCceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhh
Confidence 34455567899999999999999999999999999999999999999999999999999995 99999999998888877
Q ss_pred cCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhc
Q 018834 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 185 (350)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl 185 (350)
++.......||+.+|.+++.|.+|.||+||+|||++||||++|+++..||||||++.|+|||+.||+|||+|++|+|+|+
T Consensus 111 d~~~~~~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrl 190 (401)
T KOG1684|consen 111 DKETPEVKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRL 190 (401)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhC
Confidence 88888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHH-HhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHH
Q 018834 186 PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD 264 (350)
Q Consensus 186 ~g~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~-~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 264 (350)
+|..|.|++|||.++++.||+..||++|+||+++|+.++++|. .+...+...+...++.|.....+.........+.|+
T Consensus 191 pg~lg~YLgLTG~rl~GaD~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~ 270 (401)
T KOG1684|consen 191 PGYLGLYLGLTGQRLSGADALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVIN 270 (401)
T ss_pred ccHHHHhhhhccceecchHHHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHH
Confidence 9988999999999999999999999999999999999999997 444555588999999998876554445555789999
Q ss_pred HhcCcCCHHHHHHHHhccC-CCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccC
Q 018834 265 KCFGLDTVEEIIDSLESEA-SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHG 343 (350)
Q Consensus 265 ~~f~~~~~~ei~~~lek~~-~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~ 343 (350)
.||+.+++|||++.|++.. .+..++||+++++.+.+.||+||++|+++++++.. +++++||.+|||+....+.++|
T Consensus 271 ~~Fs~~tVeeIie~lk~~q~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~---~tl~~~l~~Eyr~s~~~~~~~D 347 (401)
T KOG1684|consen 271 KCFSANTVEEIIEALKNYQQSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSK---QTLDQCLTMEYRLSLRMLMRGD 347 (401)
T ss_pred HhhccccHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999885432 34568999999999999999999999999999999 9999999999999999988887
No 2
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1.7e-67 Score=508.86 Aligned_cols=320 Identities=63% Similarity=1.052 Sum_probs=281.8
Q ss_pred cccccccccccCCCCCCcccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCc
Q 018834 11 RYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA 90 (350)
Q Consensus 11 ~~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~ 90 (350)
|+|++|+-..... ...+.|+++..+++++||||||+++|+||.+|+.+|.++|+.|+.|++|++|||+|+|++
T Consensus 26 ~~~~~~~~~~~~~-------~~~~~v~~e~~~~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~Gka 98 (407)
T PLN02851 26 RSFSALPNYAAND-------DLQDQVLVEGRAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRA 98 (407)
T ss_pred cccccCCcccccC-------CCCCCeEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCC
Confidence 4555555433332 345578999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccc
Q 018834 91 FCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI 170 (350)
Q Consensus 91 F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~i 170 (350)
||+|+|++++++....+..+....+|+.+|.+++.|.++|||+||+|||+|||||++|+++||||||+++++|+|||+++
T Consensus 99 FcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~i 178 (407)
T PLN02851 99 FCSGADVVSLYHLINEGNVEECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQM 178 (407)
T ss_pred ccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhcc
Confidence 99999999987643333334567788999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCC
Q 018834 171 GFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY 250 (350)
Q Consensus 171 Gl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~ 250 (350)
|++|++|++|+|+|++|..|.||+|||++++|+||+++||+|++||+++++.+.+.+.++...++..+...++.+.....
T Consensus 179 Gl~PdvG~s~~L~rl~g~~g~~L~LTG~~i~a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~ 258 (407)
T PLN02851 179 GFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEERLGKLLTDDPAVIEDSLAQYGDLVY 258 (407)
T ss_pred CCCCCccHHHHHHHhcCHHHHHHHHhCCcCCHHHHHHCCCceeecCHhhHHHHHHHHHhhccCCHHHHHHHHHHhccccC
Confidence 99999999999999999889999999999999999999999999999999888888888877778888888887764321
Q ss_pred CCcchHHHHHHHHHHhcCcCCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHH
Q 018834 251 PDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKV 330 (350)
Q Consensus 251 ~~~~~~~~~~~~i~~~f~~~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~ 330 (350)
+...........|++||+.+++++|++.|+.......++|++++++.|+++||+|+++|++++++++. +|++|||++
T Consensus 259 ~~~~~~~~~~~~I~~~F~~~sv~~I~~~L~~~~~~~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~---~sl~e~l~~ 335 (407)
T PLN02851 259 PDKSSVLHKIETIDKCFGHDTVEEIIEALENEAASSYDEWCKKALKKIKEASPLSLKVTLQSIREGRF---QTLDQCLAR 335 (407)
T ss_pred CCcccHHHHHHHHHHHhCCCCHHHHHHHHHhcccccchHHHHHHHHHHHhcCcHHHHHHHHHHHHHhc---CCHHHHHHH
Confidence 22233455688999999999999999999875333347899999999999999999999999999999 999999999
Q ss_pred HHHHHhhhhh
Q 018834 331 ESTKFGTSVR 340 (350)
Q Consensus 331 E~~~~~~~~~ 340 (350)
|+++...++.
T Consensus 336 E~~l~~~~~~ 345 (407)
T PLN02851 336 EYRISLCGVS 345 (407)
T ss_pred HHHHHHHHHh
Confidence 9999999874
No 3
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1.4e-66 Score=502.83 Aligned_cols=305 Identities=68% Similarity=1.077 Sum_probs=273.4
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
.+.|+++++++|++||||||+++|+||.+|+.+|.++|+.|+.|++|++|||+|.|++||||+|+++++.....+.....
T Consensus 36 ~~~V~~e~~g~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~ 115 (401)
T PLN02157 36 DYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAI 115 (401)
T ss_pred CCceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999998754322222334
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 192 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~ 192 (350)
..++..+|.+++.|.++|||+||+|||+|||||++|+++||+|||+++++|+|||+++|++|++|++++|+|++|..++|
T Consensus 116 ~~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~~a~~ 195 (401)
T PLN02157 116 REFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEY 195 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhHHHHH
Confidence 56778888899999999999999999999999999999999999999999999999999999999999999999977999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCCH
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 272 (350)
|+|||++++|+||+++||||++||+++++++.+.+.+++..++.++...|+.+.....+.......+...++.||+.+++
T Consensus 196 L~LTG~~i~A~eA~~~GLv~~vVp~~~l~~~~~~~~~i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~d~ 275 (401)
T PLN02157 196 LGLTGLKLSGAEMLACGLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTV 275 (401)
T ss_pred HHHcCCcCCHHHHHHcCCceEEeCHhHHHHHHHHHHHHHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhcCCCH
Confidence 99999999999999999999999999998777777888888999999999988765222223344457889999999999
Q ss_pred HHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhh
Q 018834 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVR 340 (350)
Q Consensus 273 ~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~ 340 (350)
++++++|+....+..++|++++++.|+++||+|+++|+++++++++ +|++|||++||++...+++
T Consensus 276 ~ei~~al~~~~~kr~~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~---~~l~e~~~~e~~~~~~~~~ 340 (401)
T PLN02157 276 EEIIDSLEIEAGRRKDTWCITTLRRLKESSPLSLKVALRSIREGRL---QTLDQCLIREYRMSLQGLI 340 (401)
T ss_pred HHHHHHHHhhhcccchHHHHHHHHHHHhcCcHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHHh
Confidence 9999999653222357899999999999999999999999999999 9999999999999999986
No 4
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=2.6e-66 Score=499.40 Aligned_cols=303 Identities=48% Similarity=0.807 Sum_probs=272.5
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (350)
Q Consensus 35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 114 (350)
.|.++.+++|++||||||+++|+||.+|+.+|.++|+.|+.|++|++|||+|.|++||+|+|++++++....+.......
T Consensus 10 ~v~~~~~~~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~ 89 (381)
T PLN02988 10 QVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGAN 89 (381)
T ss_pred ceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHH
Confidence 58888999999999999999999999999999999999999999999999999999999999999864322222233456
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHh
Q 018834 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA 194 (350)
Q Consensus 115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ 194 (350)
+|+.+|.+++.|.++|||+||++||+|||||++|+++||||||+++++|+|||+++|++|++|++++|+|++|..++||+
T Consensus 90 ~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~~~~~l~ 169 (381)
T PLN02988 90 FFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVG 169 (381)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHHHHHHHH
Confidence 77788888889999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred hcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCCHHH
Q 018834 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE 274 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 274 (350)
|||++++|.||+++||||++||++++++....+++++..++..+...++.+.................|++||+.+++++
T Consensus 170 LTG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~ 249 (381)
T PLN02988 170 LTGARLDGAEMLACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEE 249 (381)
T ss_pred HcCCCCCHHHHHHcCCceEecCHhHHHHHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999999999988888888888888889999998875432122344456889999999999999
Q ss_pred HHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhh
Q 018834 275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVR 340 (350)
Q Consensus 275 i~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~ 340 (350)
|++.|+....+..++|++++++.++++||+|+++|+++++++++ +|++|||++|+++...+++
T Consensus 250 i~~~L~~~~~~~~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~---~sl~e~~~~e~~~~~~~~~ 312 (381)
T PLN02988 250 IISALEREATQEADGWISATIQALKKASPASLKISLRSIREGRL---QGVGQCLIREYRMVCHVMK 312 (381)
T ss_pred HHHHHHhhccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHh
Confidence 99999974322257999999999999999999999999999999 9999999999999999998
No 5
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1.7e-58 Score=446.70 Aligned_cols=308 Identities=43% Similarity=0.719 Sum_probs=269.8
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834 31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (350)
Q Consensus 31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 110 (350)
+.++.+.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++...... ..
T Consensus 8 ~~~~~v~~~~~~~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~--~~ 85 (379)
T PLN02874 8 PAEEVVLGEEKGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRES--DD 85 (379)
T ss_pred CCCCceEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhccc--ch
Confidence 3456788999999999999999999999999999999999999999999999999999999999999988642111 12
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHH
Q 018834 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG 190 (350)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a 190 (350)
....++...+.+...|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 86 ~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~a 165 (379)
T PLN02874 86 SCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLG 165 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHHH
Confidence 22345556667788899999999999999999999999999999999999999999999999999999999999999779
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcC
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD 270 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 270 (350)
++|+|||++++|+||+++|||+++||++++.++.+.+.++...+...+...++.+.................|.+||+.+
T Consensus 166 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 245 (379)
T PLN02874 166 EYLALTGARLNGKEMVACGLATHFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKD 245 (379)
T ss_pred HHHHHcCCcccHHHHHHcCCccEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCC
Confidence 99999999999999999999999999998888777777776666777777777665432233334455588999999999
Q ss_pred CHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhh---ccC
Q 018834 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVR---RHG 343 (350)
Q Consensus 271 ~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~---~~~ 343 (350)
++.++++.+++..++..++|+.++++.|.++||+|+++|+++++++.. .+++++|++|++++..++. ++|
T Consensus 246 ~~~eii~al~~~~~~~~~~~A~~~a~~l~~~sP~al~~tk~~~~~~~~---~~l~~~l~~e~~~~~~~~~~~~~~D 318 (379)
T PLN02874 246 TVEEIIKAFESEASKTGNEWIKETLKGLRRSSPTGLKITLRSIREGRK---QSLAECLKKEFRLTMNILRSTVSDD 318 (379)
T ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcChHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHhcCcCcc
Confidence 999999999887666678999999999999999999999999999998 8999999999999988887 665
No 6
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=6.8e-55 Score=416.85 Aligned_cols=302 Identities=36% Similarity=0.615 Sum_probs=261.0
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
+.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++.+..........
T Consensus 3 ~~v~~~~~~~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (342)
T PRK05617 3 DEVLAEVEGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAA 82 (342)
T ss_pred ceEEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhH
Confidence 3588999999999999999999999999999999999999999999999999999 999999999998653211111112
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 192 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~ 192 (350)
..+++..++++..+..+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+++
T Consensus 83 ~~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~ 162 (342)
T PRK05617 83 DRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTY 162 (342)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHH
Confidence 24555566788889999999999999999999999999999999999999999999999999999999999998866999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhc-cCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCC
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV-TDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 271 (350)
|+|||++++|+||+++|||++++|++++....+.+.++- ..+.+.+...++.+... .....+......|++||+..+
T Consensus 163 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~ 240 (342)
T PRK05617 163 LALTGARISAADALYAGLADHFVPSADLPALLDALISLRWDSGADVVDAALAAFATP--APASELAAQRAWIDECFAGDT 240 (342)
T ss_pred HHHcCCCCCHHHHHHcCCcceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccC--CCcchhHHHHHHHHHHhCCCC
Confidence 999999999999999999999999988876655554332 23344555566655443 223356667899999999999
Q ss_pred HHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 272 ~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+++|+++|++. .++|+.++++++.++||.+++.++++++++.. .++++++++|++++..++.++|.
T Consensus 241 ~~~~~~~l~~~----~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~d~ 306 (342)
T PRK05617 241 VEDIIAALEAD----GGEFAAKTADTLRSRSPTSLKVTLEQLRRARG---LTLEECLRRELRLALAMLRSPDF 306 (342)
T ss_pred HHHHHHHHHhc----cHHHHHHHHHHHHhCCcHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHhCCch
Confidence 99999999987 46899999999999999999999999999988 89999999999999999988874
No 7
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-50 Score=374.33 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=213.8
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
+.|.++.+++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++............
T Consensus 3 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK05980 3 DTVLIEIRDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVAL 82 (260)
T ss_pred ceEEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhH
Confidence 3688999999999999999999999999999999999999999999999999999 799999999987543111122223
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
..+++..+.++..|..+|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. ++
T Consensus 83 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 162 (260)
T PRK05980 83 RDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRAL 162 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHH
Confidence 45556666788889999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhc-C
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCF-G 268 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f-~ 268 (350)
+|++||++++|+||+++||||+++|++++.+.... +.+++..+|.++..+|+.++........ ....+...+..+| +
T Consensus 163 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 242 (260)
T PRK05980 163 ELLLTGDAFSAERALEIGLVNAVVPHEELLPAARALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAGS 242 (260)
T ss_pred HHHHcCCccCHHHHHHcCCCCcccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999887765444 4678889999999999988765433222 2233456677777 4
Q ss_pred cCCHHHHHHHHhccCCC
Q 018834 269 LDTVEEIIDSLESEASL 285 (350)
Q Consensus 269 ~~~~~ei~~~lek~~~~ 285 (350)
.+..+.+.++++|++|.
T Consensus 243 ~~~~e~~~af~~kr~p~ 259 (260)
T PRK05980 243 ADLREGLAAWIERRRPA 259 (260)
T ss_pred hhHHHHHHHHhccCCCC
Confidence 56677777888888664
No 8
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1e-49 Score=368.27 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=212.2
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
+..+.++++++|++||||||++ |++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++... +...
T Consensus 2 ~~~v~~~~~~~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~----~~~~ 76 (258)
T PRK09076 2 MIELDLEIDGHVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADG----DKAV 76 (258)
T ss_pred ceEEEEEEECCEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhc----Chhh
Confidence 4468899999999999999986 999999999999999999999999999999998 799999999987532 1122
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
...+......++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a 156 (258)
T PRK09076 77 AREMARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWA 156 (258)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 233444456678889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG 268 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~ 268 (350)
++|++||++++|+||+++|||++++|++++.+.... +.+++..+|.++..+|+.++......... ...+...+..++.
T Consensus 157 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~ 236 (258)
T PRK09076 157 KRMILCGERVDAATALRIGLVEEVVEKGEAREAALALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFD 236 (258)
T ss_pred HHHHHcCCcCCHHHHHHCCCCceecCchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999887654444 46888999999999999987654332222 2234566777785
Q ss_pred -cCCHHHHHHHHhccCCCCC
Q 018834 269 -LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 269 -~~~~~ei~~~lek~~~~~~ 287 (350)
.+..+.+.++++|++|.|.
T Consensus 237 ~~~~~eg~~af~~kr~p~~~ 256 (258)
T PRK09076 237 TEDQREGVNAFLEKRAPQWK 256 (258)
T ss_pred CchHHHHHHHHhcCCCCCCC
Confidence 5666677788899887654
No 9
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=1.1e-49 Score=371.05 Aligned_cols=253 Identities=21% Similarity=0.304 Sum_probs=211.4
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834 31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (350)
Q Consensus 31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 110 (350)
..++.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++..........
T Consensus 5 ~~~~~i~~~~~~~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 84 (275)
T PRK09120 5 NRWDTVKVEVEDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEI 84 (275)
T ss_pred cccccEEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhH
Confidence 34667999999999999999999999999999999999999999999999999999999999999999875421111111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (350)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~- 189 (350)
....+.+..+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 85 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~ 164 (275)
T PRK09120 85 LQERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRD 164 (275)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHH
Confidence 1223334456778889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHH-H--HHHHH
Q 018834 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR-I--DIVDK 265 (350)
Q Consensus 190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~--~~i~~ 265 (350)
+++|++||++++|+||+++|||+++||++++++.+..+ .+++..+|.++..+|+.++............. . .....
T Consensus 165 a~~llltg~~~~A~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~ 244 (275)
T PRK09120 165 ALYYIMTGETFTGRKAAEMGLVNESVPLAQLRARTRELAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQAN 244 (275)
T ss_pred HHHHHhcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988655444 67889999999999999986544332222221 1 22344
Q ss_pred hcCc--CCHHHHHHHHhccC
Q 018834 266 CFGL--DTVEEIIDSLESEA 283 (350)
Q Consensus 266 ~f~~--~~~~ei~~~lek~~ 283 (350)
+|.. +..+++.++++|+.
T Consensus 245 ~~~~~~d~~eg~~afl~kr~ 264 (275)
T PRK09120 245 SLDPEGGREEGLKQFLDDKS 264 (275)
T ss_pred hhCCHHHHHHHHHHHHhccc
Confidence 5644 46788888888874
No 10
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-49 Score=368.86 Aligned_cols=254 Identities=21% Similarity=0.333 Sum_probs=216.5
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChH
Q 018834 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE 110 (350)
Q Consensus 32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~ 110 (350)
+.+.|.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++.... ...+
T Consensus 9 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~--~~~~ 86 (269)
T PRK06127 9 PTGKLLAEKTGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR--SDAE 86 (269)
T ss_pred CCCceEEEEECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc--cchH
Confidence 345689999999999999999999999999999999999999999999999999998 8999999999875421 1222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (350)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~- 189 (350)
....++...+.++..|..+||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 87 ~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 166 (269)
T PRK06127 87 AVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSA 166 (269)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHHH
Confidence 2344555566788889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc
Q 018834 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF 267 (350)
Q Consensus 190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f 267 (350)
+++|++||++++|+||+++||||++||++++.+...++ .+++..+|.++..+|+.++......... ...+...+..+|
T Consensus 167 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~ 246 (269)
T PRK06127 167 AKDLFYTARRFDAAEALRIGLVHRVTAADDLETALADYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACF 246 (269)
T ss_pred HHHHHHcCCCCCHHHHHHcCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998887655554 6788889999999999998754433222 233456777787
Q ss_pred C-cCCHHHHHHHHhccCCCCC
Q 018834 268 G-LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 268 ~-~~~~~ei~~~lek~~~~~~ 287 (350)
. .+..+.+.+|++|+.|.+.
T Consensus 247 ~~~d~~e~~~af~ekr~p~~~ 267 (269)
T PRK06127 247 DSEDYREGRAAFMEKRKPVFK 267 (269)
T ss_pred cChHHHHHHHHHhcCCCCCCC
Confidence 5 5666667788899877653
No 11
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-49 Score=365.99 Aligned_cols=249 Identities=24% Similarity=0.239 Sum_probs=211.0
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
+.|.++++++|++||||||++.|+||.+|+.+|.++++.++ +++++|||||.|++||+|+|++++... ......
T Consensus 2 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~----~~~~~~ 75 (255)
T PRK08150 2 SLVSYELDGGVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRER----DAGEGM 75 (255)
T ss_pred ceEEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhc----cchhHH
Confidence 46788999999999999999999999999999999999987 789999999999999999999987532 111222
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.++...+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +++
T Consensus 76 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~ 155 (255)
T PRK08150 76 HHSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTD 155 (255)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 3345556778889999999999999999999999999999999999999999999999999999999999999988 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhcC-c
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFG-L 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f~-~ 269 (350)
|++||++++|+||+++||||++||++++.+.. +.+.+++..+|.++..+|+.++........... .+......+|. .
T Consensus 156 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~ 235 (255)
T PRK08150 156 MMLTGRVYDAQEGERLGLAQYLVPAGEALDKAMELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQSAP 235 (255)
T ss_pred HHHcCCcCCHHHHHHcCCccEeeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999999998877644 444688889999999999998765333222222 23445566674 5
Q ss_pred CCHHHHHHHHhccCCCCCc
Q 018834 270 DTVEEIIDSLESEASLIND 288 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~~~ 288 (350)
+..+++.++++|++|.+++
T Consensus 236 d~~eg~~af~~kr~p~~~~ 254 (255)
T PRK08150 236 EAKERLRAFLEKKAAKVKP 254 (255)
T ss_pred HHHHHHHHHhccCCCCCCC
Confidence 6777788889999887753
No 12
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.9e-49 Score=368.29 Aligned_cols=255 Identities=19% Similarity=0.261 Sum_probs=211.9
Q ss_pred CCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834 32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (350)
Q Consensus 32 ~~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 110 (350)
.++.+.+++ +++|++||||||+++|++|.+|+.+|.++|+.++.|++|++|||||.|++||+|+|++++.+. .....
T Consensus 9 ~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~--~~~~~ 86 (268)
T PRK07327 9 DYPALRFDRPPPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEM--ADDFE 86 (268)
T ss_pred CCCeEEEEecCCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhc--cCcHH
Confidence 456788988 588999999999999999999999999999999999999999999999999999999987542 11222
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (350)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~- 189 (350)
....++...+.++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 166 (268)
T PRK07327 87 VRARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAK 166 (268)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHH
Confidence 2334555567788889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-
Q 018834 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF- 267 (350)
Q Consensus 190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f- 267 (350)
+++|++||++++|+||+++|||++++|++++.+... .+++++..++.++..+|+.++................-...+
T Consensus 167 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~ 246 (268)
T PRK07327 167 AKYYLLLCEPVSGEEAERIGLVSLAVDDDELLPKALEVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEFMGFS 246 (268)
T ss_pred HHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHcc
Confidence 999999999999999999999999999988876544 446888999999999999987532111111111122222355
Q ss_pred CcCCHHHHHHHHhccCCCCCc
Q 018834 268 GLDTVEEIIDSLESEASLIND 288 (350)
Q Consensus 268 ~~~~~~ei~~~lek~~~~~~~ 288 (350)
+.+..+.+.++++|++|.+.+
T Consensus 247 ~~d~~eg~~af~ekr~p~~~~ 267 (268)
T PRK07327 247 GPDVREGLASLREKRAPDFPG 267 (268)
T ss_pred ChhHHHHHHHHHhcCCCCCCC
Confidence 456677788888998887643
No 13
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-49 Score=369.85 Aligned_cols=254 Identities=21% Similarity=0.268 Sum_probs=213.2
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhh-------c
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-------Q 106 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-------~ 106 (350)
+.+.++++++|++||||||+++|++|.+|+.+|.+++++++.|++|++|||+|.|++||+|+|++++..... .
T Consensus 6 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~ 85 (272)
T PRK06142 6 ESFTVELADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGLA 85 (272)
T ss_pred ceEEEEecCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccccccc
Confidence 468999999999999999999999999999999999999999999999999999999999999998754210 0
Q ss_pred CChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhcc
Q 018834 107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 186 (350)
Q Consensus 107 ~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~ 186 (350)
........+.....+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~ 165 (272)
T PRK06142 86 RPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRII 165 (272)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHh
Confidence 11122333444556778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHH-HHHHhhcCCCCCHHHHHHCCCCccccCC-CChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHH
Q 018834 187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDI 262 (350)
Q Consensus 187 g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~-~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~ 262 (350)
|.. +++|++||++++|+||+++||||+++|+ +++.+... .+.+++..+|.++...|+.++......... .......
T Consensus 166 G~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~ 245 (272)
T PRK06142 166 GDGHLRELALTGRDIDAAEAEKIGLVNRVYDDADALLAAAHATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATW 245 (272)
T ss_pred CHHHHHHHHHhCCCcCHHHHHHcCCccEecCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 988 9999999999999999999999999996 67765444 446888899999999999998653332222 2223456
Q ss_pred HHHhc-CcCCHHHHHHHHhccCCCCC
Q 018834 263 VDKCF-GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 263 i~~~f-~~~~~~ei~~~lek~~~~~~ 287 (350)
...+| +.+..+++.++++++.|+|.
T Consensus 246 ~~~~~~~~d~~egv~af~~kr~p~~~ 271 (272)
T PRK06142 246 NAAMLPSKDLTEAIAAHMEKRPPEFT 271 (272)
T ss_pred HHHHhcCccHHHHHHHHhcCCCCCCC
Confidence 66677 46677778888898877653
No 14
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-49 Score=366.16 Aligned_cols=248 Identities=23% Similarity=0.332 Sum_probs=210.3
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
+.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++... ... .
T Consensus 4 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~---~ 77 (257)
T PRK05862 4 ETILVETRGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADL---SFM---D 77 (257)
T ss_pred ceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhcc---chh---H
Confidence 4588899999999999999999999999999999999999999999999999999999999999987532 111 1
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.+......++..|.++||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +.+
T Consensus 78 ~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 157 (257)
T PRK05862 78 VYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMD 157 (257)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence 1223334466789999999999999999999999999999999999999999999999999999999999999988 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhc-Cc
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCF-GL 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f-~~ 269 (350)
|++||+.++|+||+++||||+++|++++.+.+..+ .+++..++.++..+|+.++........ ....+...+..++ +.
T Consensus 158 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~ 237 (257)
T PRK05862 158 LCLTGRMMDAAEAERAGLVSRVVPADKLLDEALAAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFATE 237 (257)
T ss_pred HHHhCCccCHHHHHHcCCCCEeeCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCh
Confidence 99999999999999999999999998877654444 678888999999999999865433322 2233455666677 45
Q ss_pred CCHHHHHHHHhccCCCCC
Q 018834 270 DTVEEIIDSLESEASLIN 287 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~~ 287 (350)
+..+.+.++++|++|.+.
T Consensus 238 ~~~e~i~af~~kr~p~~~ 255 (257)
T PRK05862 238 DQKEGMAAFVEKRKPVFK 255 (257)
T ss_pred hHHHHHHHHhccCCCCCC
Confidence 677778888899877653
No 15
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=2.8e-49 Score=364.89 Aligned_cols=248 Identities=17% Similarity=0.233 Sum_probs=207.9
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
+.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++... ....
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~--~~~~--- 76 (256)
T TIGR03210 2 EDILYEKRNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGG--YDGR--- 76 (256)
T ss_pred CceEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcc--ccch---
Confidence 4688999999999999999999999999999999999999999999999999998 799999999987421 1111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
..+......++..|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 77 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~ 156 (256)
T TIGR03210 77 GTIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAR 156 (256)
T ss_pred hHHHHHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHH
Confidence 11223345677889999999999999999999999999999999999999999999999998888899999999998 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcC-c
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-L 269 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~-~ 269 (350)
+|++||++++|+||+++||||+++|++++.+.... +.+++..+|.++..+|+.++............+...+..+|. .
T Consensus 157 ~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (256)
T TIGR03210 157 EIWYLCRRYTAQEALAMGLVNAVVPHDQLDAEVQKWCDEIVEKSPTAIAIAKRSFNMDTAHQRGIAGMGMYALKLYYDTA 236 (256)
T ss_pred HHHHhCCCcCHHHHHHcCCceeeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHccCh
Confidence 99999999999999999999999999888765444 468889999999999999876432211111112345666774 5
Q ss_pred CCHHHHHHHHhccCCCC
Q 018834 270 DTVEEIIDSLESEASLI 286 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~ 286 (350)
+..+++.++++|++|.+
T Consensus 237 d~~e~~~af~~kr~p~~ 253 (256)
T TIGR03210 237 ESREGVKAFQEKRKPEF 253 (256)
T ss_pred hHHHHHHHHhccCCCCC
Confidence 67777888889987764
No 16
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.1e-49 Score=364.72 Aligned_cols=250 Identities=22% Similarity=0.347 Sum_probs=214.3
Q ss_pred CcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834 34 NQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 34 ~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
+.|.+++ +++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++... ....
T Consensus 3 ~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~----~~~~ 78 (260)
T PRK07657 3 QNISVDYVTPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM----NEEQ 78 (260)
T ss_pred ceEEEEEccCCEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcC----Chhh
Confidence 5788886 789999999999999999999999999999999999999999999999 699999999987532 1223
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
...++...+.++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a 158 (260)
T PRK07657 79 VRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRA 158 (260)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHHHH
Confidence 344556667788889999999999999999999999999999999999999999999999999999999999999988 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF- 267 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f- 267 (350)
.+|++||++++|+||+++||||+++|++++.+....+ .+++..++.++..+|+.++......... ...+...+..++
T Consensus 159 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~ 238 (260)
T PRK07657 159 KELIYTGRRISAQEAKEIGLVEFVVPAHLLEEKAIEIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIP 238 (260)
T ss_pred HHHHHhCCCCCHHHHHHcCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998887655444 6788899999999999998654333222 223455666777
Q ss_pred CcCCHHHHHHHHhccCCCCC
Q 018834 268 GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 268 ~~~~~~ei~~~lek~~~~~~ 287 (350)
+.+..+.+.+++++++|.+.
T Consensus 239 ~~~~~e~~~af~~~r~~~~~ 258 (260)
T PRK07657 239 TKDRLEGLQAFKEKRKPMYK 258 (260)
T ss_pred CHhHHHHHHHHhcCCCCCCC
Confidence 45677777788899877653
No 17
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=3.1e-49 Score=364.43 Aligned_cols=248 Identities=22% Similarity=0.280 Sum_probs=210.3
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
+.|.++++++|++||||||+++|++|.+|+.+|.++++.++.|++||+|||+|.|++||+|+|++++... ... .
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~---~ 75 (255)
T PRK09674 2 SELLVSRQQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK---DLA---A 75 (255)
T ss_pred ceEEEEeECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhcc---chh---h
Confidence 4678899999999999999999999999999999999999999999999999999999999999987531 111 1
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +++
T Consensus 76 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~ 155 (255)
T PRK09674 76 TLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQ 155 (255)
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence 1222334567788999999999999999999999999999999999999999999999999999999999999988 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-c
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-L 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~ 269 (350)
|+++|+.++|+||+++||||+++|++++.+ +.+.+.+++..+|.++..+|+.++......... ...+...+..++. .
T Consensus 156 l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~ 235 (255)
T PRK09674 156 MVLTGESITAQQAQQAGLVSEVFPPELTLERALQLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAATE 235 (255)
T ss_pred HHHcCCccCHHHHHHcCCCcEecChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCH
Confidence 999999999999999999999999988765 455557888999999999999987654333222 2234556667775 5
Q ss_pred CCHHHHHHHHhccCCCCC
Q 018834 270 DTVEEIIDSLESEASLIN 287 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~~ 287 (350)
+..+.+.++++|++|.+.
T Consensus 236 ~~~e~i~af~~kr~p~~~ 253 (255)
T PRK09674 236 DRHEGISAFLEKRTPDFK 253 (255)
T ss_pred HHHHHHHHHhccCCCCCC
Confidence 666667788888877653
No 18
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.2e-49 Score=365.89 Aligned_cols=254 Identities=19% Similarity=0.281 Sum_probs=211.2
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhc--CCh
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNT-NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ--GKL 109 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~-~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~--~~~ 109 (350)
.+.+.++++++|++||||||+++|++|. +|+.+|.++++.++.|++|++|||+|.|++||+|+|++++.+.... +..
T Consensus 2 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (266)
T PRK09245 2 TDFLLVERDGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSP 81 (266)
T ss_pred CCceEEEEECCEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccc
Confidence 3468999999999999999999999995 9999999999999999999999999999999999999988542110 111
Q ss_pred HHH-HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834 110 EEC-KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (350)
Q Consensus 110 ~~~-~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~ 188 (350)
... ..+......++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~ 161 (266)
T PRK09245 82 ADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGM 161 (266)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhH
Confidence 111 1222334567788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHH
Q 018834 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDK 265 (350)
Q Consensus 189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~ 265 (350)
. +++|++||++++|+||+++||||+++|++++.+... .+.+++..++.++..+|+.++.......... ..+...+..
T Consensus 162 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~ 241 (266)
T PRK09245 162 ARAAEMAFTGDAIDAATALEWGLVSRVVPADQLLPAARALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQAL 241 (266)
T ss_pred HHHHHHHHcCCCcCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 8 999999999999999999999999999988776444 4468899999999999999986533222222 223455666
Q ss_pred hc-CcCCHHHHHHHHhccCCCC
Q 018834 266 CF-GLDTVEEIIDSLESEASLI 286 (350)
Q Consensus 266 ~f-~~~~~~ei~~~lek~~~~~ 286 (350)
++ +.+..+++.++++|+.|.+
T Consensus 242 ~~~~~d~~eg~~af~~kr~p~~ 263 (266)
T PRK09245 242 AHHTADHREAVDAFLEKRPPVF 263 (266)
T ss_pred HhcCHhHHHHHHHHHcCCCCCC
Confidence 66 4566777778889987765
No 19
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=5.3e-49 Score=364.08 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=213.7
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
+..+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| +.||+|+|++++... ....
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~----~~~~ 78 (260)
T PRK05809 3 LKNVILEKEGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDL----NEEE 78 (260)
T ss_pred cceEEEEEeCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhcc----ChHH
Confidence 34688999999999999999999999999999999999999999999999999999 999999999987542 1122
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
...+......++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 158 (260)
T PRK05809 79 GRKFGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKA 158 (260)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 233444455678889999999999999999999999999999999999999999999999999999999999999987 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcC
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFG 268 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~ 268 (350)
++|++||+.++|+||+++||||+++|++++.+.. +.+.+++..+|.++..+|+.++.......... ..+...+..++.
T Consensus 159 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~ 238 (260)
T PRK05809 159 KELIYTGDMINAEEALRIGLVNKVVEPEKLMEEAKALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFS 238 (260)
T ss_pred HHHHHhCCCCCHHHHHHcCCCCcccChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999988876544 44468889999999999999986543332222 234566777774
Q ss_pred -cCCHHHHHHHHhccCCCCC
Q 018834 269 -LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 269 -~~~~~ei~~~lek~~~~~~ 287 (350)
.+..+.+.++++|++|.+.
T Consensus 239 ~~~~~egi~af~~~r~p~~~ 258 (260)
T PRK05809 239 TEDQTEGMTAFVEKREKNFK 258 (260)
T ss_pred CHHHHHHHHHHhcCCCCCCC
Confidence 5667778888899877653
No 20
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=3.8e-49 Score=367.61 Aligned_cols=252 Identities=21% Similarity=0.270 Sum_probs=209.9
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhc---CC---
Q 018834 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ---GK--- 108 (350)
Q Consensus 35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~---~~--- 108 (350)
.+..+.+++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++...... ..
T Consensus 9 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~ 88 (275)
T PLN02664 9 IIQKSPNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGR 88 (275)
T ss_pred EEEecCCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchh
Confidence 355566899999999999999999999999999999999999999999999999999999999987542110 01
Q ss_pred -hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH
Q 018834 109 -LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187 (350)
Q Consensus 109 -~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g 187 (350)
......++....+++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 168 (275)
T PLN02664 89 SGERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVG 168 (275)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhC
Confidence 1122333444556778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHhhcCCCCCHHHHHHCCCCccccCC-CChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHH
Q 018834 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIV 263 (350)
Q Consensus 188 ~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~-~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i 263 (350)
.. +++|++||++++|+||+++||||++||+ +++++.... ..+++..+|.++..+|+.++........... .+...+
T Consensus 169 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~~~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~ 248 (275)
T PLN02664 169 YGNAMELALTGRRFSGSEAKELGLVSRVFGSKEDLDEGVRLIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWN 248 (275)
T ss_pred HHHHHHHHHhCCCCCHHHHHHcCCCceeeCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 88 9999999999999999999999999995 778765554 4688899999999999998865333222222 234456
Q ss_pred HHhc-CcCCHHHHHHHHhccCCCC
Q 018834 264 DKCF-GLDTVEEIIDSLESEASLI 286 (350)
Q Consensus 264 ~~~f-~~~~~~ei~~~lek~~~~~ 286 (350)
..+| +.+..+++.++++|++|.+
T Consensus 249 ~~~~~~~d~~eg~~af~ekr~p~~ 272 (275)
T PLN02664 249 SAMLVSDDLNEAVSAQIQKRKPVF 272 (275)
T ss_pred HHhccChhHHHHHHHHhccCCCCC
Confidence 6677 4566777888889987765
No 21
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.9e-49 Score=363.73 Aligned_cols=252 Identities=21% Similarity=0.287 Sum_probs=214.9
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
.++.++++++|++||||||++.|++|.+|+.+|.++++.++.|++||+|||+|.|++||+|+|++++..... .......
T Consensus 3 ~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~-~~~~~~~ 81 (260)
T PRK07511 3 AELLSRREGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRA-KPPSVQA 81 (260)
T ss_pred CeeEEEeECCEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhccc-ccchhHH
Confidence 358889999999999999999999999999999999999999999999999999999999999998864211 1223344
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.++...+.++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 161 (260)
T PRK07511 82 ASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATE 161 (260)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHH
Confidence 5566777888899999999999999999999999999999999999999999999999999999999999999988 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhcC-c
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCFG-L 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f~-~ 269 (350)
|++||++++|+||+++||||+++|++++.+ +.+.+++++..+|.++...|+.++........ ....+...+..+|. .
T Consensus 162 l~ltg~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~ 241 (260)
T PRK07511 162 LLLEGKPISAERLHALGVVNRLAEPGQALAEALALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLHHA 241 (260)
T ss_pred HHHhCCCCCHHHHHHcCCccEeeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999999887655 44445678888999999999998765433322 23334566777884 5
Q ss_pred CCHHHHHHHHhccCCCC
Q 018834 270 DTVEEIIDSLESEASLI 286 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~ 286 (350)
+..+.+.+++++++|.+
T Consensus 242 ~~~~~i~~f~~~r~~~~ 258 (260)
T PRK07511 242 DALEGIAAFLEKRAPDY 258 (260)
T ss_pred hHHHHHHHHhccCCCCC
Confidence 66667777888887654
No 22
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=5e-49 Score=363.39 Aligned_cols=250 Identities=21% Similarity=0.255 Sum_probs=208.3
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (350)
Q Consensus 36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 115 (350)
++++++++|++||||||++.|++|.+|+.+|.++++.++.|+ +++|||+|.|++||+|+|++++.... ....+....+
T Consensus 1 ~~~e~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~ 78 (256)
T TIGR02280 1 ILSALEAGVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTP-GGAPDLGRTI 78 (256)
T ss_pred CeEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhcc-ccchhHHHHH
Confidence 467889999999999999999999999999999999999998 99999999999999999999875321 1111111122
Q ss_pred HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (350)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ 194 (350)
......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus 79 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~ 158 (256)
T TIGR02280 79 ETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLA 158 (256)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHH
Confidence 22234567788999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-CcCC
Q 018834 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-GLDT 271 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-~~~~ 271 (350)
+||++++|+||+++|||++++|++++.+... .+.+++..++.++..+|+.++.......... ..+......+| +.+.
T Consensus 159 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~ 238 (256)
T TIGR02280 159 MLGEKLDARTAASWGLIWQVVDDAALMDEAQALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGRSADY 238 (256)
T ss_pred HcCCCCCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcChhH
Confidence 9999999999999999999999988776544 4467888999999999999986543332222 22355666777 4566
Q ss_pred HHHHHHHHhccCCCCC
Q 018834 272 VEEIIDSLESEASLIN 287 (350)
Q Consensus 272 ~~ei~~~lek~~~~~~ 287 (350)
.+.+.++++|+.|.+.
T Consensus 239 ~eg~~af~~kr~p~~~ 254 (256)
T TIGR02280 239 AEGVTAFLDKRNPQFT 254 (256)
T ss_pred HHHHHHHHcCCCCCCC
Confidence 6777788899877654
No 23
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5e-49 Score=363.67 Aligned_cols=249 Identities=24% Similarity=0.311 Sum_probs=212.1
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (350)
Q Consensus 35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 114 (350)
.+.++++++|++||||||++ |++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++... ........
T Consensus 3 ~i~~~~~~~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~~ 78 (257)
T PRK07658 3 FLSVRVEDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSV---TEAEQATE 78 (257)
T ss_pred eEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcc---CchhhHHH
Confidence 67889999999999999986 999999999999999999999999999999999999999999987532 11122233
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHH
Q 018834 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 193 (350)
Q Consensus 115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l 193 (350)
+......++..|..+|||+||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +++|
T Consensus 79 ~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 158 (257)
T PRK07658 79 LAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEM 158 (257)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHH
Confidence 445556788889999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred hhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-cC
Q 018834 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-LD 270 (350)
Q Consensus 194 ~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~~ 270 (350)
++||++++|+||+++||||+++|++++.+. .+.+.+++..+|.++..+|+.++......... ...+...+..++. .+
T Consensus 159 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~ 238 (257)
T PRK07658 159 MLTSEPITGAEALKWGLVNGVFPEETLLDDAKKLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFTSED 238 (257)
T ss_pred HHcCCCcCHHHHHHcCCcCeecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHH
Confidence 999999999999999999999999887654 44456888899999999999987654332222 2334566777774 56
Q ss_pred CHHHHHHHHhccCCCCC
Q 018834 271 TVEEIIDSLESEASLIN 287 (350)
Q Consensus 271 ~~~ei~~~lek~~~~~~ 287 (350)
..+.+.++++|++|.+.
T Consensus 239 ~~egi~af~~kr~p~~~ 255 (257)
T PRK07658 239 AKEGVQAFLEKRKPSFS 255 (257)
T ss_pred HHHHHHHHHcCCCCCCC
Confidence 67778888899877653
No 24
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=8e-49 Score=363.69 Aligned_cols=250 Identities=22% Similarity=0.266 Sum_probs=213.2
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
.+.+.++.+++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++... ...+..
T Consensus 10 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~~ 86 (266)
T PRK08139 10 APLLLREDRDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAA---RGLAYF 86 (266)
T ss_pred CCceEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcc---cchhHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999987532 122233
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
..+++...+++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++| +++|+|++|.. ++
T Consensus 87 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A~ 165 (266)
T PRK08139 87 RALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQAM 165 (266)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHHH
Confidence 44566667788899999999999999999999999999999999999999999999999999875 57899999988 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-C
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-G 268 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~ 268 (350)
+|++||++++|+||+++||||+++|++++.+.... +.+++..++.++...|+.++......... ...+...+..+| +
T Consensus 166 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~ 245 (266)
T PRK08139 166 EMLLTGEFIDAATAREWGLVNRVVPADALDAAVARLAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMMA 245 (266)
T ss_pred HHHHcCCccCHHHHHHcCCccEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999888765544 46888999999999999998754433222 223345566676 4
Q ss_pred cCCHHHHHHHHhccCCCC
Q 018834 269 LDTVEEIIDSLESEASLI 286 (350)
Q Consensus 269 ~~~~~ei~~~lek~~~~~ 286 (350)
.+..+++.++++|++|.+
T Consensus 246 ~d~~eg~~af~~kr~p~~ 263 (266)
T PRK08139 246 EDAEEGIDAFLEKRPPEW 263 (266)
T ss_pred chHHHHHHHHhcCCCCCC
Confidence 667777888889887765
No 25
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.5e-49 Score=364.00 Aligned_cols=252 Identities=23% Similarity=0.246 Sum_probs=208.0
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
.+.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++.... .+. ...
T Consensus 4 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~-~~~ 81 (263)
T PRK07799 4 GPHALVEQRGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKP-PGD-SFK 81 (263)
T ss_pred CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhcc-ccc-hhh
Confidence 356899999999999999999999999999999999999999999999999999999999999999986431 111 101
Q ss_pred HH-H-HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834 113 KD-F-FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (350)
Q Consensus 113 ~~-~-~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~- 189 (350)
.. + ...... +..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..
T Consensus 82 ~~~~~~~~~~~-~~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 160 (263)
T PRK07799 82 DGSYDPSRIDA-LLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTV 160 (263)
T ss_pred hhhhhhhHHHH-HHHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHH
Confidence 01 1 111222 3346899999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc
Q 018834 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF 267 (350)
Q Consensus 190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f 267 (350)
+++|++||++++|+||+++||||+++|++++.+ +.+.+.+++..+|.++..+|+.++......... ...+...+..+|
T Consensus 161 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~ 240 (263)
T PRK07799 161 ACDLLLTGRHITAAEAKEIGLIGHVVPDGQALDKALELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVF 240 (263)
T ss_pred HHHHHHcCCCCCHHHHHHcCCccEecCcchHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999988765 445557888899999999999988654332222 222355666777
Q ss_pred C-cCCHHHHHHHHhccCCCCC
Q 018834 268 G-LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 268 ~-~~~~~ei~~~lek~~~~~~ 287 (350)
. .+..+.+.+++++++|.+.
T Consensus 241 ~~~~~~egi~af~~~r~p~~~ 261 (263)
T PRK07799 241 LSEDAKEGPRAFAEKRAPNFQ 261 (263)
T ss_pred cCccHHHHHHHHHccCCCCCC
Confidence 4 5667777788898877653
No 26
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.7e-49 Score=365.60 Aligned_cols=253 Identities=19% Similarity=0.230 Sum_probs=214.2
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (350)
Q Consensus 35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 114 (350)
.+.++.+++|++||||||++.|+|+.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.......+......
T Consensus 18 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~ 97 (277)
T PRK08258 18 HFLWEVDDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLA 97 (277)
T ss_pred ceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999998753211112222334
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccC-CCchHHHHhhccHHH-HHH
Q 018834 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P-~~G~s~~L~rl~g~~-a~~ 192 (350)
+.....+++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++| ++|++++|++++|.. +++
T Consensus 98 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~ 177 (277)
T PRK08258 98 FTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASE 177 (277)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHH
Confidence 445556788889999999999999999999999999999999999999999999999995 789999999999988 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-c
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-L 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~ 269 (350)
|++||++++|+||+++||||+++|++++.+... .+.+++..++.++..+|+.++......... ...+...+..+|. .
T Consensus 178 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~ 257 (277)
T PRK08258 178 LLYTGRSMSAEEGERWGFFNRLVEPEELLAEAQALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQTE 257 (277)
T ss_pred HHHcCCCCCHHHHHHcCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999999888776544 446888999999999999998754433332 2234556677774 5
Q ss_pred CCHHHHHHHHhccCCCCC
Q 018834 270 DTVEEIIDSLESEASLIN 287 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~~ 287 (350)
+..+++.++++|++|.+.
T Consensus 258 d~~eg~~af~ekr~p~~~ 275 (277)
T PRK08258 258 DFRRAYEAFVAKRKPVFE 275 (277)
T ss_pred hHHHHHHHHhcCCCCCCC
Confidence 666777788899887653
No 27
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.6e-49 Score=363.82 Aligned_cols=252 Identities=22% Similarity=0.272 Sum_probs=209.0
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
+.+.++.+++|++||||||+++|++|.+|+.+|.+++++++ |+++++|||+|.|++||+|+|++++.............
T Consensus 4 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 82 (262)
T PRK08140 4 ETILLAIEAGVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLGE 82 (262)
T ss_pred ceEEEEeECCEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhHH
Confidence 46889999999999999999999999999999999999999 99999999999999999999999875321011111111
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.+......++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 83 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~ 162 (262)
T PRK08140 83 SIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALG 162 (262)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 1222233467788999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-c
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-L 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~ 269 (350)
|++||++++|+||+++||||+++|++++.+.. +.+++++..++.++..+|+.++......... ...+......++. .
T Consensus 163 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~ 242 (262)
T PRK08140 163 LALLGEKLSAEQAEQWGLIWRVVDDAALADEAQQLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGRSA 242 (262)
T ss_pred HHHcCCCcCHHHHHHcCCccEeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCh
Confidence 99999999999999999999999998877544 4456788899999999999998654333222 2223456667774 5
Q ss_pred CCHHHHHHHHhccCCCC
Q 018834 270 DTVEEIIDSLESEASLI 286 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~ 286 (350)
+..+.+.++++|++|.+
T Consensus 243 ~~~e~~~af~~kr~p~~ 259 (262)
T PRK08140 243 DYAEGVSAFLEKRAPRF 259 (262)
T ss_pred hHHHHHHHHhcCCCCCC
Confidence 66677778889887764
No 28
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.7e-49 Score=363.34 Aligned_cols=248 Identities=20% Similarity=0.210 Sum_probs=205.4
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (350)
Q Consensus 36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 115 (350)
|.++++++|++||||||++.|++|.+|+.+|.+++++++.|++|++|||+|.|+.||+|+|++++........ ..+
T Consensus 1 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~----~~~ 76 (255)
T PRK06563 1 VSRERRGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAGG----FPF 76 (255)
T ss_pred CeEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccch----hhh
Confidence 4678899999999999999999999999999999999999999999999999999999999998754211111 112
Q ss_pred HHHHHH-HHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHH
Q 018834 116 FRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL 193 (350)
Q Consensus 116 ~~~~~~-l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l 193 (350)
.....+ +...+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. +++|
T Consensus 77 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 156 (255)
T PRK06563 77 PEGGIDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRY 156 (255)
T ss_pred hhhhhHHHHHHHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHH
Confidence 211222 22357899999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred hhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhcC-cC
Q 018834 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFG-LD 270 (350)
Q Consensus 194 ~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f~-~~ 270 (350)
++||++++|+||+++||||+++|++++.+. .+.+++++..+|.+++.+|+.++........... .+...+..+|+ .+
T Consensus 157 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~d 236 (255)
T PRK06563 157 LLTGDEFDAQEALRLGLVQEVVPPGEQLERAIELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFTSED 236 (255)
T ss_pred HHcCCCcCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCch
Confidence 999999999999999999999999887654 4444678889999999999998765433322222 23556677775 55
Q ss_pred CHHHHHHHHhccCCCCC
Q 018834 271 TVEEIIDSLESEASLIN 287 (350)
Q Consensus 271 ~~~ei~~~lek~~~~~~ 287 (350)
..+.+.++++|++|.+.
T Consensus 237 ~~eg~~af~~kr~p~~~ 253 (255)
T PRK06563 237 AKEGVQAFLERRPARFK 253 (255)
T ss_pred HHHHHHHHhcCCCCCCC
Confidence 66667788899877653
No 29
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.6e-49 Score=362.82 Aligned_cols=252 Identities=24% Similarity=0.308 Sum_probs=213.9
Q ss_pred ccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcC
Q 018834 29 TDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 107 (350)
Q Consensus 29 ~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~ 107 (350)
+....+.+.++++++|++||||||+++|+||.+|+.+|.+++++++.|+++++|||+|+| ++||+|+|++++... .
T Consensus 3 ~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~---~ 79 (262)
T PRK06144 3 MTTSTDELLLEVRGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAF---S 79 (262)
T ss_pred cccCCCceEEEeeCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhc---c
Confidence 344456789999999999999999999999999999999999999999999999999998 799999999987542 1
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEeccccc-ccccCCCchHHHHhhcc
Q 018834 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL-IGFHPDAGASFYLSHLP 186 (350)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~-iGl~P~~G~s~~L~rl~ 186 (350)
..+....+......++..|.++||||||+|||+|+|||++|+++||||||+++++|++||++ +|++|++|++++|++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~v 159 (262)
T PRK06144 80 TAEDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALL 159 (262)
T ss_pred chhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHh
Confidence 11222334455667888899999999999999999999999999999999999999999997 99999999999999999
Q ss_pred HHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHH
Q 018834 187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD 264 (350)
Q Consensus 187 g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 264 (350)
|.. ++++++||++++|+||+++||||+++|++++.+.. +.+++++..++.++...|+.++..... ........+.
T Consensus 160 G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~---~l~~~~~~~~ 236 (262)
T PRK06144 160 GAARVKDMLFTARLLEAEEALAAGLVNEVVEDAALDARADALAELLAAHAPLTLRATKEALRRLRRE---GLPDGDDLIR 236 (262)
T ss_pred CHHHHHHHHHcCCCcCHHHHHHcCCcCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhc---CHHHHHHHHH
Confidence 988 99999999999999999999999999998887644 455788899999999999998764322 2222345666
Q ss_pred HhcC-cCCHHHHHHHHhccCCCC
Q 018834 265 KCFG-LDTVEEIIDSLESEASLI 286 (350)
Q Consensus 265 ~~f~-~~~~~ei~~~lek~~~~~ 286 (350)
.+|. .+..+.+.++++|++|.+
T Consensus 237 ~~~~~~~~~e~~~af~~kr~p~~ 259 (262)
T PRK06144 237 MCYMSEDFREGVEAFLEKRPPKW 259 (262)
T ss_pred HHhcChHHHHHHHHHhcCCCCCC
Confidence 7775 556666778889887765
No 30
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=7.4e-49 Score=362.65 Aligned_cols=250 Identities=17% Similarity=0.209 Sum_probs=207.0
Q ss_pred cEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 35 ~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
.+.+++ +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++...... .....
T Consensus 3 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~-~~~~~ 81 (259)
T TIGR01929 3 DIRYEKSTDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYI-DDSGV 81 (259)
T ss_pred eEEEEEcCCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhcccc-chhhH
Confidence 477888 899999999999999999999999999999999999999999999999 899999999986421000 11111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
.. .....++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. ++
T Consensus 82 ~~--~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~ 159 (259)
T TIGR01929 82 HR--LNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAR 159 (259)
T ss_pred HH--HHHHHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHH
Confidence 11 1234567788999999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-Cc
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-GL 269 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-~~ 269 (350)
+|++||++++|+||+++||||++||++++.+.. +.+++++..++.++..+|+.++............+...+..++ +.
T Consensus 160 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~~~~~~~~~~ 239 (259)
T TIGR01929 160 EIWFLCRQYDAEQALDMGLVNTVVPLADLEKETVRWCREILQKSPMAIRMLKAALNADCDGQAGLQELAGNATMLFYMTE 239 (259)
T ss_pred HHHHhCCccCHHHHHHcCCcccccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999999998887644 4457899999999999999987643322111112234556666 46
Q ss_pred CCHHHHHHHHhccCCCCC
Q 018834 270 DTVEEIIDSLESEASLIN 287 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~~ 287 (350)
+..+.+.++++|++|.+.
T Consensus 240 d~~egi~af~~kr~p~~~ 257 (259)
T TIGR01929 240 EGQEGRNAFLEKRQPDFS 257 (259)
T ss_pred cHHHHHHHHhccCCCCCC
Confidence 677777788899877653
No 31
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.8e-49 Score=362.28 Aligned_cols=249 Identities=22% Similarity=0.327 Sum_probs=209.7
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
+++.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++......+......
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 81 (255)
T PRK07260 2 EHIIYEVEDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSLV 81 (255)
T ss_pred CceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhHH
Confidence 46888999999999999999999999999999999999999999999999999999999999999986432222222222
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.+.+..++++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ 161 (255)
T PRK07260 82 KIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATH 161 (255)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHH
Confidence 3444556778889999999999999999999999999999999999999999999999999999999999999987 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcC-c
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFG-L 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~-~ 269 (350)
|++||++++|+||+++||||+++|++++.+.... +.+++..++.++...|+.++.......... ..+...+..++. .
T Consensus 162 l~l~g~~~sa~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 241 (255)
T PRK07260 162 LAMTGEALTAEKALEYGFVYRVAESEKLEKTCEQLLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAFKE 241 (255)
T ss_pred HHHhCCccCHHHHHHcCCcceecCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhcCH
Confidence 9999999999999999999999999888765544 468888899999999999987543332222 223456666764 5
Q ss_pred CCHHHHHHHHhcc
Q 018834 270 DTVEEIIDSLESE 282 (350)
Q Consensus 270 ~~~~ei~~~lek~ 282 (350)
+..+.+.++++|+
T Consensus 242 ~~~e~~~af~~kr 254 (255)
T PRK07260 242 DFKEGVRAFSERR 254 (255)
T ss_pred HHHHHHHHHHhcC
Confidence 6666666767765
No 32
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-48 Score=360.09 Aligned_cols=247 Identities=21% Similarity=0.286 Sum_probs=204.8
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
.+.+.++++++|++||||||+++|++|.+|+.+|.+++++++.|++|++|||+|.|+.||+|+|++++... ......
T Consensus 2 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~~~~ 78 (254)
T PRK08252 2 SDEVLVERRGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARG---ERPSIP 78 (254)
T ss_pred CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcc---cchhhh
Confidence 34688999999999999999999999999999999999999999999999999999999999999988642 111111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
. .....+. ...+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 79 ~---~~~~~~~--~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~ 153 (254)
T PRK08252 79 G---RGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAM 153 (254)
T ss_pred H---HHHHHHH--HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHH
Confidence 1 1111121 2479999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-C
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-G 268 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-~ 268 (350)
+|++||++++|+||+++||||+++|++++.+. .+.+.+++..+|.++..+|+.++.......... ..+...+..++ +
T Consensus 154 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~ 233 (254)
T PRK08252 154 ELALTGDMLTAERAHELGLVNRLTEPGQALDAALELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFTS 233 (254)
T ss_pred HHHHcCCccCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999887654 444578889999999999999976533222222 22345566666 5
Q ss_pred cCCHHHHHHHHhccCCCCC
Q 018834 269 LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 269 ~~~~~ei~~~lek~~~~~~ 287 (350)
.+..+.+.++++|++|.|.
T Consensus 234 ~~~~eg~~af~~kr~p~~~ 252 (254)
T PRK08252 234 ADAKEGATAFAEKRAPVWT 252 (254)
T ss_pred chHHHHHHHHhcCCCCCCC
Confidence 6667777788898877653
No 33
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-48 Score=361.36 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=209.6
Q ss_pred CCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834 33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 33 ~~~v~~~~~-~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
++.+.++++ ++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++...... ....
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~ 81 (262)
T PRK07468 3 FETIRIAVDARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTA-DRAT 81 (262)
T ss_pred cceEEEEEcCCcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhccc-chhh
Confidence 345788875 68999999999999999999999999999999999999999999999999999999987542111 1111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
....+.....++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++ +|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~~-vG~~~a 160 (262)
T PRK07468 82 RIEEARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVAR-MGEANA 160 (262)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHhh-ccHHHH
Confidence 2223444566788899999999999999999999999999999999999999999999999999999987766 6777 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCC-cchHHHHHHHHHHhcC
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG 268 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~i~~~f~ 268 (350)
++|++||++++|+||+++||||+++|++++++... .+.+++..+|.++..+|+.++...... ......+...+..+|.
T Consensus 161 ~~lll~g~~~~a~eA~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~ 240 (262)
T PRK07468 161 RRVFMSARLFDAEEAVRLGLLSRVVPAERLDAAVEAEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWE 240 (262)
T ss_pred HHHHHhCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999888876554 447888899999999999887653322 2223334566777774
Q ss_pred -cCCHHHHHHHHhccCCCCC
Q 018834 269 -LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 269 -~~~~~ei~~~lek~~~~~~ 287 (350)
.+..+.+.++++|++|.|.
T Consensus 241 s~d~~e~~~af~~kr~~~~~ 260 (262)
T PRK07468 241 TEEAREGIAAFFDKRAPAWR 260 (262)
T ss_pred CHHHHHHHHHHHcCCCCCCC
Confidence 5666778888999887653
No 34
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-48 Score=360.61 Aligned_cols=248 Identities=25% Similarity=0.345 Sum_probs=209.1
Q ss_pred CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834 33 CNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 33 ~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
.+.+.++. +++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++... ..
T Consensus 6 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~--- 79 (261)
T PRK08138 6 TDVVLLERPADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA---GA--- 79 (261)
T ss_pred CCCEEEEEccCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhcc---ch---
Confidence 34677887 789999999999999999999999999999999999999999999999999999999987532 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
...+.+..+.++..+..+|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. +
T Consensus 80 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 159 (261)
T PRK08138 80 IEMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKA 159 (261)
T ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHHH
Confidence 122334456677889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG 268 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~ 268 (350)
++|++||++++|+||+++||||+++|++++.+....+ .+++..++.++..+|+.++......... ...+.+.+..++.
T Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~ 239 (261)
T PRK08138 160 MRMALTGCMVPAPEALAIGLVSEVVEDEQTLPRALELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFD 239 (261)
T ss_pred HHHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998876544444 6788889999999999887643332222 2234556677775
Q ss_pred -cCCHHHHHHHHhccCCCC
Q 018834 269 -LDTVEEIIDSLESEASLI 286 (350)
Q Consensus 269 -~~~~~ei~~~lek~~~~~ 286 (350)
.+..+.+.++++|++|.+
T Consensus 240 ~~~~~~~i~af~~kr~~~~ 258 (261)
T PRK08138 240 SEDQKEGMDAFLEKRKPAY 258 (261)
T ss_pred CHHHHHHHHHHhcCCCCCC
Confidence 556666777788887765
No 35
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=1.3e-48 Score=359.43 Aligned_cols=243 Identities=22% Similarity=0.311 Sum_probs=208.2
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (350)
Q Consensus 41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (350)
+++|++||||||+++|+||.+|+.+|.+++++++.|+++++|||+|.+ ++||+|+|++++... .......++...
T Consensus 2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~ 77 (251)
T PLN02600 2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM----SPSEVQKFVNSL 77 (251)
T ss_pred CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc----ChHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999984 899999999987532 122234455656
Q ss_pred HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhcCC
Q 018834 120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA 198 (350)
Q Consensus 120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ltG~ 198 (350)
+.++..+..+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|++||+
T Consensus 78 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~ 157 (251)
T PLN02600 78 RSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGR 157 (251)
T ss_pred HHHHHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCC
Confidence 7788889999999999999999999999999999999999999999999999999999999999999988 999999999
Q ss_pred CCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-CcCCHHHH
Q 018834 199 KLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-GLDTVEEI 275 (350)
Q Consensus 199 ~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~~~~~~ei 275 (350)
+++|+||+++||||+++|++++.+ ..+.+.+++..+|.++..+|+.++......... ...+...+..+| +.+..+++
T Consensus 158 ~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~ 237 (251)
T PLN02600 158 RIGAREAASMGLVNYCVPAGEAYEKALELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLKTKDRLEGL 237 (251)
T ss_pred ccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 999999999999999999988765 444557888999999999999998654333222 223456677777 46677778
Q ss_pred HHHHhccCCCCC
Q 018834 276 IDSLESEASLIN 287 (350)
Q Consensus 276 ~~~lek~~~~~~ 287 (350)
.++++|++|.+.
T Consensus 238 ~af~ekr~p~~~ 249 (251)
T PLN02600 238 AAFAEKRKPVYT 249 (251)
T ss_pred HHHhcCCCCCCC
Confidence 888899987653
No 36
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.5e-48 Score=362.11 Aligned_cols=255 Identities=19% Similarity=0.236 Sum_probs=212.5
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCC-CceEEEEEcCCCccccCCChhhHHHhhhcC--Ch
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDP-NIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--KL 109 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~-~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--~~ 109 (350)
++.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|+ ++++|||+|.|++||+|+|++++....... ..
T Consensus 3 ~~~v~~~~~~~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 82 (266)
T PRK05981 3 FKKVTLDFDGGVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGG 82 (266)
T ss_pred cceEEEEeECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccc
Confidence 456899999999999999999999999999999999999999876 499999999999999999999875321110 01
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (350)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~ 189 (350)
.....+....+.+...|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~ 162 (266)
T PRK05981 83 DAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKA 162 (266)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHH
Confidence 11223344456788889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHh
Q 018834 190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKC 266 (350)
Q Consensus 190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~ 266 (350)
+++|++||++++|+||+++|||++++|++++.+. .+.+.+++..++.++..+|+.++........ ....+...+..+
T Consensus 163 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~ 242 (266)
T PRK05981 163 RAMELSLLGEKLPAETALQWGLVNRVVDDAELMAEAMKLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIA 242 (266)
T ss_pred HHHHHHHhCCCcCHHHHHHcCCceEeeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999887654 4444678888999999999998765333222 223345566677
Q ss_pred cC-cCCHHHHHHHHhccCCCCC
Q 018834 267 FG-LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 267 f~-~~~~~ei~~~lek~~~~~~ 287 (350)
|. .+..+.+.++++|++|.+.
T Consensus 243 ~~s~d~~e~~~af~~kr~~~~~ 264 (266)
T PRK05981 243 GKTEDFKEGVGAFLQKRPAQFK 264 (266)
T ss_pred hcChhHHHHHHHHhcCCCCCCC
Confidence 74 5667778888899877653
No 37
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-48 Score=361.09 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=210.1
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++........ ...
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~-~~~ 81 (262)
T PRK05995 3 YETLEIEQRGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYSD-DEN 81 (262)
T ss_pred CceEEEEeeCCEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccCc-hhh
Confidence 4568899999999999999999999999999999999999999999999999999999999999998754211111 111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
...+...++++..|.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++ |++++|.. ++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~ 160 (262)
T PRK05995 82 RADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAAR 160 (262)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHH
Confidence 22234556788889999999999999999999999999999999999999999999999999988765 78888988 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH--HHHHHHHHHhcC
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV--IHRIDIVDKCFG 268 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~i~~~f~ 268 (350)
+|++||++++|+||+++||||+++|++++.+....+ .+++..++.++..+|+.++.......... ..+...+..++.
T Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~ 240 (262)
T PRK05995 161 RYFLTAERFDAAEALRLGLVHEVVPAEALDAKVDELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRA 240 (262)
T ss_pred HHHHcCCccCHHHHHHcCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999988887655444 68888999999999999876433222222 223445566664
Q ss_pred -cCCHHHHHHHHhccCCCCC
Q 018834 269 -LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 269 -~~~~~ei~~~lek~~~~~~ 287 (350)
.+..+.+.++++|++|.+.
T Consensus 241 ~~d~~e~~~af~~kr~p~~~ 260 (262)
T PRK05995 241 TEEAREGVAAFLEKRKPAWR 260 (262)
T ss_pred CHHHHHHHHHHhcCCCCCCC
Confidence 5667778888999877653
No 38
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-49 Score=354.46 Aligned_cols=249 Identities=25% Similarity=0.346 Sum_probs=209.2
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
....+...+++|+.||||||+++|+|+..|+.+|.++|..++.|+.++++||||.|++||+|+|++++...... +-.
T Consensus 36 ~~~~~~~~d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~---~~~ 112 (290)
T KOG1680|consen 36 IKIELVGEDNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQ---DVS 112 (290)
T ss_pred ceeEEeecCCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhcccc---ccc
Confidence 33455667789999999999999999999999999999999999999999999999999999999998753111 111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
...+.+.+ ..+.+.+||+||++||+|+|||++|++.||+|||+++++|++|+.++|++|.+|+|++|+|.+|.. |+
T Consensus 113 ~~~~~~~~---~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Al 189 (290)
T KOG1680|consen 113 DGIFLRVW---DLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRAL 189 (290)
T ss_pred cccccchh---hhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHH
Confidence 12122222 223479999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCCh-HHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-C
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKL-PLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF-G 268 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l-~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f-~ 268 (350)
++++||++++|+||.++|||++|+|.+++ .++.+...+++..++..++..|+.++..........+ .+...+...| .
T Consensus 190 e~~ltg~~~~AqeA~~~GlVn~Vvp~~~~l~eAv~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~~ 269 (290)
T KOG1680|consen 190 EMILTGRRLGAQEAKKIGLVNKVVPSGDALGEAVKLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFAT 269 (290)
T ss_pred HHHHhcCcccHHHHHhCCceeEeecchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhhh
Confidence 99999999999999999999999999985 4677777899999999999999999885543333333 3455666666 4
Q ss_pred cCCHHHHHHHHhccCCCCC
Q 018834 269 LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 269 ~~~~~ei~~~lek~~~~~~ 287 (350)
.+..|++.++.+|++++|.
T Consensus 270 ~d~~Eg~~~f~~kr~~~~~ 288 (290)
T KOG1680|consen 270 EDRLEGMTAFAEKRKPKFS 288 (290)
T ss_pred HHHHHHHHHhcccCCcccc
Confidence 6788888888888876553
No 39
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=2.1e-48 Score=359.41 Aligned_cols=248 Identities=27% Similarity=0.396 Sum_probs=207.3
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
+..+.++..++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||||.|++||+|+|++++.. .......
T Consensus 4 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~---~~~~~~~ 80 (257)
T COG1024 4 YETILVEREDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS---PEDGNAA 80 (257)
T ss_pred CCeeEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhc---ccchhHH
Confidence 4568888888999999999999999999999999999999999999999999999999999999999875 1112222
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
..++...+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+.|++++|+|++|.. +.
T Consensus 81 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~ 160 (257)
T COG1024 81 ENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAK 160 (257)
T ss_pred HHHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHH
Confidence 36778888899999999999999999999999999999999999999999999999999999889999999999998 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCC-CChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF- 267 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~-~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f- 267 (350)
+|++||+.++++||+++|||++++++ +++.+....+ .+++. +|.++...|+.+............ .....+...+
T Consensus 161 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~~l~~~a~~~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~ 239 (257)
T COG1024 161 ELLLTGEPISAAEALELGLVDEVVPDAEELLERALELARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLFS 239 (257)
T ss_pred HHHHcCCcCCHHHHHHcCCcCeeeCCHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999986 5777655555 45544 889999999888775433222222 2233444455
Q ss_pred CcCCHHHHHHHHhccCCC
Q 018834 268 GLDTVEEIIDSLESEASL 285 (350)
Q Consensus 268 ~~~~~~ei~~~lek~~~~ 285 (350)
+.+..|.+.++++ +.|.
T Consensus 240 ~~d~~eg~~a~~~-r~p~ 256 (257)
T COG1024 240 SEDFREGVRAFLE-RKPV 256 (257)
T ss_pred ChhHHHHHHHHHc-cCCC
Confidence 4566666777777 5543
No 40
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-48 Score=359.34 Aligned_cols=244 Identities=19% Similarity=0.296 Sum_probs=206.3
Q ss_pred CcEEEE-EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834 34 NQVLVE-GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 34 ~~v~~~-~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
.++.++ .+++|++||||||+++|++|.+|+.+|.++++.++.|++||+|||||.| ++||+|+|++++... +...
T Consensus 6 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~ 81 (256)
T PRK06143 6 AHAGVTRDDRGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATL----DQAS 81 (256)
T ss_pred ccceeeecCCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhc----Chhh
Confidence 346666 4688999999999999999999999999999999999999999999999 799999999987532 1222
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
...+....+.++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|+ |++|++++|++++|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a 160 (256)
T PRK06143 82 AEAFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWART 160 (256)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHH
Confidence 3445566677888899999999999999999999999999999999999999999999998 8888999999999998 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhcC
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCFG 268 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f~ 268 (350)
++|++||++++|+||+++||||+++|++++.+.... +.+++..+|.++..+|+.++........ ....+...+..+|.
T Consensus 161 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~ 240 (256)
T PRK06143 161 RWLLLTGETIDAAQALAWGLVDRVVPLAELDAAVERLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFL 240 (256)
T ss_pred HHHHHcCCcCCHHHHHHCCCcCeecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999888765544 4688889999999999998865433222 22234556677774
Q ss_pred -cCCHHHHHHHHhcc
Q 018834 269 -LDTVEEIIDSLESE 282 (350)
Q Consensus 269 -~~~~~ei~~~lek~ 282 (350)
.+..+.+.++++|+
T Consensus 241 ~~d~~e~~~af~ekr 255 (256)
T PRK06143 241 TGEPQRHMAAFLNRK 255 (256)
T ss_pred ChHHHHHHHHHHhhc
Confidence 55666666777765
No 41
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.4e-48 Score=361.83 Aligned_cols=253 Identities=19% Similarity=0.270 Sum_probs=208.7
Q ss_pred CCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834 33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 33 ~~~v~~~~~-~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
++.+.++++ ++|++||||||++.|++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++...... ....
T Consensus 4 ~~~l~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~ 82 (265)
T PRK05674 4 FQTIELIRDPRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSADL-DYNT 82 (265)
T ss_pred cceEEEEEcCCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcccc-cchh
Confidence 556888885 78999999999999999999999999999999999999999999999999999999987532110 1111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
........++++..+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++ +++++|.. +
T Consensus 83 ~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~~-l~~~vG~~~a 161 (265)
T PRK05674 83 NLDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISPF-VVKAIGERAA 161 (265)
T ss_pred hhHHHHHHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHHH-HHHHhCHHHH
Confidence 112233445678889999999999999999999999999999999999999999999999999987665 78888888 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHH--HHHHHHHhc
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH--RIDIVDKCF 267 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~i~~~f 267 (350)
++|+|||+.++|+||+++|||++++|++++.+. .+.+.+++..+|.+++.+|+.++............ ....+..++
T Consensus 162 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (265)
T PRK05674 162 RRYALTAERFDGRRARELGLLAESYPAAELEAQVEAWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIR 241 (265)
T ss_pred HHHHHhCcccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998887754 45557889999999999999988754433222221 234556666
Q ss_pred -CcCCHHHHHHHHhccCCCCC
Q 018834 268 -GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 268 -~~~~~~ei~~~lek~~~~~~ 287 (350)
+.+..+++.++++|++|.+.
T Consensus 242 ~s~d~~e~~~af~~kr~p~~~ 262 (265)
T PRK05674 242 VSAEGQEGLRAFLEKRTPAWQ 262 (265)
T ss_pred cCHHHHHHHHHHHccCCCCCC
Confidence 45677778888999877653
No 42
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-48 Score=359.74 Aligned_cols=249 Identities=22% Similarity=0.302 Sum_probs=212.8
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
+.+.++.+++|++||||||++.|++|.+|+.+|.++++.+ .|+++++|||+|.|+.||+|+|++++... .......
T Consensus 6 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~ 81 (260)
T PRK07659 6 ESVVVKYEGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSS---NDESKFD 81 (260)
T ss_pred ceEEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhc---cCchhHH
Confidence 4689999999999999999999999999999999999999 58899999999999999999999987632 1222334
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.++...++++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus 82 ~~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~ 161 (260)
T PRK07659 82 GVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQ 161 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHH
Confidence 5666677888899999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-Cc
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-GL 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~~ 269 (350)
|++||+.++|+||+++||||+++ ++++.+ +.+.+++++..++.++...|+.++......... ...+.+....++ +.
T Consensus 162 l~ltg~~~~a~eA~~~Glv~~vv-~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~ 240 (260)
T PRK07659 162 IIWEGKKLSATEALDLGLIDEVI-GGDFQTAAKQKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQTA 240 (260)
T ss_pred HHHhCCccCHHHHHHcCChHHHh-hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCH
Confidence 99999999999999999999999 666765 444557888899999999999988654333222 222345566677 46
Q ss_pred CCHHHHHHHHhccCCCCC
Q 018834 270 DTVEEIIDSLESEASLIN 287 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~~ 287 (350)
+..+.+.++++|++|.+.
T Consensus 241 ~~~egi~af~~kr~p~~~ 258 (260)
T PRK07659 241 DHKEGIRAFLEKRLPVFK 258 (260)
T ss_pred hHHHHHHHHhcCCCCCCC
Confidence 677778888999887654
No 43
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-48 Score=358.90 Aligned_cols=248 Identities=23% Similarity=0.250 Sum_probs=204.7
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|+| ++||+|+|++++.... ....
T Consensus 3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~---~~~~ 79 (259)
T PRK06494 3 LPFSTVERKGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGG---KRGW 79 (259)
T ss_pred CceeEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcC---cchh
Confidence 35688999999999999999999999999999999999999999999999999998 7999999999875321 1111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
....+ ..+ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 80 ~~~~~---~~~-~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a 155 (259)
T PRK06494 80 PESGF---GGL-TSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRA 155 (259)
T ss_pred hhHHH---HHH-HHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHH
Confidence 11111 222 334589999999999999999999999999999999999999999999999999999999999988 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchHHH-H--HHHHHHh
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-R--IDIVDKC 266 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~--~~~i~~~ 266 (350)
++|++||+.++|+||+++||||+++|++++.+.. +.+++++..+|.++..+|+.++............ + ......+
T Consensus 156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~ 235 (259)
T PRK06494 156 MGMILTGRRVTAREGLELGFVNEVVPAGELLAAAERWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEAR 235 (259)
T ss_pred HHHHHcCCcCCHHHHHHcCCCcEecCHhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998877544 4447888999999999999988654333222222 2 2345667
Q ss_pred cC-cCCHHHHHHHHhccCCCCC
Q 018834 267 FG-LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 267 f~-~~~~~ei~~~lek~~~~~~ 287 (350)
|. .+..+.+.++++|++|.+.
T Consensus 236 ~~~~d~~eg~~af~~kr~p~~~ 257 (259)
T PRK06494 236 RASQDYIEGPKAFAEKRPPRWK 257 (259)
T ss_pred hcCccHHHHHHHHHccCCCCCC
Confidence 75 5666667777888877653
No 44
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-48 Score=362.02 Aligned_cols=257 Identities=19% Similarity=0.225 Sum_probs=209.4
Q ss_pred cCCCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcC-
Q 018834 30 DDLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG- 107 (350)
Q Consensus 30 ~~~~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~- 107 (350)
.+.++.|.++. +++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.......
T Consensus 5 ~~~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~ 84 (276)
T PRK05864 5 RSTMSLVLVDHPRPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEG 84 (276)
T ss_pred CCCCCceEEeeecCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhccccccc
Confidence 34566788887 7899999999999999999999999999999999999999999999999999999999874211000
Q ss_pred --ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccC-CCchHHHHhh
Q 018834 108 --KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSH 184 (350)
Q Consensus 108 --~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P-~~G~s~~L~r 184 (350)
.......++.....++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~ 164 (276)
T PRK05864 85 LTRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPR 164 (276)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHh
Confidence 1111223344455677888999999999999999999999999999999999999999999999997 7899999999
Q ss_pred ccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCC-CcchHHH-HH
Q 018834 185 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIH-RI 260 (350)
Q Consensus 185 l~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~-~~~~~~~-~~ 260 (350)
++|.. +++|++||++++|+||+++|||++++|++++.+. .+.+.+++..+|.++..+|+.+...... ....... +.
T Consensus 165 ~vG~~~A~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~ 244 (276)
T PRK05864 165 AIGSSRAFEIMLTGRDVDAEEAERIGLVSRQVPDEQLLDTCYAIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEG 244 (276)
T ss_pred hhCHHHHHHHHHcCCccCHHHHHHcCCcceeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHH
Confidence 99988 9999999999999999999999999999887654 4455788899999999999988764321 2222111 11
Q ss_pred H-HHHHhc-CcCCHHHHHHHHhccCCCC
Q 018834 261 D-IVDKCF-GLDTVEEIIDSLESEASLI 286 (350)
Q Consensus 261 ~-~i~~~f-~~~~~~ei~~~lek~~~~~ 286 (350)
. .....| +.+..+.+.++++|++|.+
T Consensus 245 ~~~~~~~~~~~d~~e~~~af~~kr~p~~ 272 (276)
T PRK05864 245 LGQLFVRLLTANFEEAVAARAEKRPPVF 272 (276)
T ss_pred HHHHHHhccChhHHHHHHHHhccCCCCC
Confidence 1 121234 5677777888889987765
No 45
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.3e-48 Score=364.08 Aligned_cols=255 Identities=20% Similarity=0.231 Sum_probs=209.9
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcC------
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG------ 107 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~------ 107 (350)
+.+.++++++|++||||||++.|+||.+|+.+|.++|+.++.|+++++|||+|.|+.||+|+|++++.......
T Consensus 4 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (296)
T PRK08260 4 ETIRYDVADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPV 83 (296)
T ss_pred ceEEEeeeCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhccccccccccc
Confidence 45889999999999999999999999999999999999999999999999999999999999999875311000
Q ss_pred -------ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHH
Q 018834 108 -------KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF 180 (350)
Q Consensus 108 -------~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~ 180 (350)
.......+......++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~ 163 (296)
T PRK08260 84 EADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSW 163 (296)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhh
Confidence 0111122223344577789999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccC-CHHHHHHHHHHHhccCCC--Ccch
Q 018834 181 YLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTD-DPSVIEACLEKYSDLVYP--DKNS 255 (350)
Q Consensus 181 ~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~-~~~~i~~~~~~~~~~~~~--~~~~ 255 (350)
+|+|++|.. +++|++||++++|+||+++|||++++|++++.+. .+.+.+++.. ++.++..+|+.++..... ....
T Consensus 164 ~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~~ 243 (296)
T PRK08260 164 FLPRLVGLQTALEWVYSGRVFDAQEALDGGLVRSVHPPDELLPAARALAREIADNTSPVSVALTRQMMWRMAGADHPMEA 243 (296)
T ss_pred hHHHhhCHHHHHHHHHcCCccCHHHHHHCCCceeecCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhcccCCCcHHH
Confidence 999999988 9999999999999999999999999998887654 4444677775 899999999998765321 1122
Q ss_pred HHHHHHHHHHhc-CcCCHHHHHHHHhccCCCCCc
Q 018834 256 VIHRIDIVDKCF-GLDTVEEIIDSLESEASLIND 288 (350)
Q Consensus 256 ~~~~~~~i~~~f-~~~~~~ei~~~lek~~~~~~~ 288 (350)
...+...+..++ +.+..+.+.++++|++|.|.+
T Consensus 244 ~~~e~~~~~~~~~~~d~~egi~af~~kr~p~f~~ 277 (296)
T PRK08260 244 HRVDSRAIYSRGRSGDGKEGVSSFLEKRPAVFPG 277 (296)
T ss_pred HHHHHHHHHHHccChhHHHHHHHHhcCCCCCCCC
Confidence 222344566676 456777788889999887653
No 46
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.8e-48 Score=357.52 Aligned_cols=248 Identities=25% Similarity=0.329 Sum_probs=212.6
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
..+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.... .. . .
T Consensus 5 ~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~--~~-~--~ 79 (259)
T PRK06688 5 TDLLVELEDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAP--PK-P--P 79 (259)
T ss_pred CceEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccC--cc-h--H
Confidence 45889999999999999999999999999999999999999999999999999999999999999886431 11 1 3
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.++...++++..+.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. +.+
T Consensus 80 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~ 159 (259)
T PRK06688 80 DELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAE 159 (259)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHHH
Confidence 3455667788889999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-c
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-L 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~ 269 (350)
|++||++++|+||+++||||+++|++++.+.+..+ .+++..++.++..+|+.++......... ...+...+..+|. .
T Consensus 160 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~ 239 (259)
T PRK06688 160 MLLLGEPLSAEEALRIGLVNRVVPAAELDAEADAQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLRTP 239 (259)
T ss_pred HHHhCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhCCH
Confidence 99999999999999999999999988877654444 6788889999999999887654333222 2234566677775 5
Q ss_pred CCHHHHHHHHhccCCCC
Q 018834 270 DTVEEIIDSLESEASLI 286 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~ 286 (350)
+..+.+.+++++++|.+
T Consensus 240 ~~~~~~~af~~~~~p~~ 256 (259)
T PRK06688 240 DFREGATAFIEKRKPDF 256 (259)
T ss_pred HHHHHHHHHHcCCCCCC
Confidence 66666777788887754
No 47
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=6.2e-48 Score=357.00 Aligned_cols=248 Identities=21% Similarity=0.303 Sum_probs=206.7
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
+.+.++++++|++||||||+ .|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++... ....
T Consensus 3 ~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~---~~~~-- 76 (261)
T PRK03580 3 ESLHTTRNGSILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEG---EAPD-- 76 (261)
T ss_pred ceEEEEEECCEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhcc---Ccch--
Confidence 35889999999999999996 5999999999999999999999999999999998 799999999987532 1111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
..+....+.++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 77 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~ 156 (261)
T PRK03580 77 ADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIAN 156 (261)
T ss_pred hhhhhhhhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 11222234456778899999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHH-HH----HHHHH
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-RI----DIVDK 265 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~----~~i~~ 265 (350)
++++||++++|+||+++|||++++|++++.+.+..+ .+++..+|.++...|+.++............ +. ..+..
T Consensus 157 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~ 236 (261)
T PRK03580 157 EMVMTGRRMDAEEALRWGIVNRVVPQAELMDRARELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPS 236 (261)
T ss_pred HHHHhCCccCHHHHHHcCCCcEecCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHH
Confidence 999999999999999999999999998887655444 6888999999999999987653332222222 11 35566
Q ss_pred hc-CcCCHHHHHHHHhccCCCCC
Q 018834 266 CF-GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 266 ~f-~~~~~~ei~~~lek~~~~~~ 287 (350)
+| +.+..+++.++++|++|.+.
T Consensus 237 ~~~~~d~~e~~~af~ekr~~~~~ 259 (261)
T PRK03580 237 VLHSEDALEGPRAFAEKRDPVWK 259 (261)
T ss_pred HhcCccHHHHHHHHhcCCCCCCC
Confidence 77 45667778888899877653
No 48
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7e-48 Score=357.00 Aligned_cols=253 Identities=22% Similarity=0.228 Sum_probs=208.5
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
+++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.... ......
T Consensus 1 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~~~~ 79 (262)
T PRK07509 1 MMDRVSVTIEDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSP-GNAVKL 79 (262)
T ss_pred CCceEEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhccc-chhhhh
Confidence 3567899999999999999999999999999999999999999999999999999999999999999876421 111111
Q ss_pred HHH----HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH
Q 018834 112 CKD----FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187 (350)
Q Consensus 112 ~~~----~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g 187 (350)
... ......+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g 159 (262)
T PRK07509 80 LFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVR 159 (262)
T ss_pred HhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhC
Confidence 111 1122345666788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHH
Q 018834 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDK 265 (350)
Q Consensus 188 ~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~ 265 (350)
.. +++|++||++++|+||+++||||+++++ ..+.+.+.+.+++..+|.++..+|+.++......... ...+......
T Consensus 160 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~-~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~ 238 (262)
T PRK07509 160 KDVARELTYTARVFSAEEALELGLVTHVSDD-PLAAALALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIR 238 (262)
T ss_pred HHHHHHHHHcCCCcCHHHHHHcCChhhhhch-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 88 9999999999999999999999999964 2334455557788889999999999987654332222 2223455666
Q ss_pred hc-CcCCHHHHHHHHhccCCCC
Q 018834 266 CF-GLDTVEEIIDSLESEASLI 286 (350)
Q Consensus 266 ~f-~~~~~~ei~~~lek~~~~~ 286 (350)
++ +.+..+++.++++|++|.+
T Consensus 239 ~~~~~d~~e~~~af~ekr~p~~ 260 (262)
T PRK07509 239 LLLGKNQKIAVKAQMKKRAPKF 260 (262)
T ss_pred HhcChhHHHHHHHHhcCCCCCC
Confidence 66 5677777888899987765
No 49
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.8e-48 Score=356.42 Aligned_cols=242 Identities=20% Similarity=0.264 Sum_probs=200.0
Q ss_pred CcEEEEEeCC---EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834 34 NQVLVEGKAN---SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE 110 (350)
Q Consensus 34 ~~v~~~~~~~---v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 110 (350)
+.|.++++++ |++||||||++.|++|.+|+.+|.++|+.++.|+++++|||+|.|++||+|+|++++.... .+.
T Consensus 3 ~~i~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~-~~~-- 79 (251)
T PRK06023 3 DHILVERPGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAA-MGG-- 79 (251)
T ss_pred ceEEEEeecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhcc-ccc--
Confidence 3588888774 9999999999999999999999999999999999999999999999999999999875421 111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (350)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~- 189 (350)
..+....++++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|..
T Consensus 80 --~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~ 157 (251)
T PRK06023 80 --TSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQR 157 (251)
T ss_pred --hhhHHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHH
Confidence 12233445677889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcC
Q 018834 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 268 (350)
Q Consensus 190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 268 (350)
+.++++||+.++|+||+++|||++++|++++.+. .+.+.+++..++.++..+|+.++............+......+|.
T Consensus 158 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~l~~~~~~e~~~~~~~~~ 237 (251)
T PRK06023 158 AFALLALGEGFSAEAAQEAGLIWKIVDEEAVEAETLKAAEELAAKPPQALQIARDLMRGPREDILARIDEEAKHFAARLK 237 (251)
T ss_pred HHHHHHhCCCCCHHHHHHcCCcceeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999888764 444478889999999999999875422111112223445566665
Q ss_pred c-CCHHHHHHHHh
Q 018834 269 L-DTVEEIIDSLE 280 (350)
Q Consensus 269 ~-~~~~ei~~~le 280 (350)
. +..+.+.++++
T Consensus 238 ~~~~~e~~~af~e 250 (251)
T PRK06023 238 SAEARAAFEAFMR 250 (251)
T ss_pred CHHHHHHHHHHhc
Confidence 4 44444555554
No 50
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=8e-48 Score=356.69 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=208.0
Q ss_pred CCCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCCh
Q 018834 31 DLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL 109 (350)
Q Consensus 31 ~~~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 109 (350)
...+.|.++. +++|++||||||+++|++|.+|+.+|.++|+.++.|++|++|||+|.|+.||+|+|++++.+.. .+.
T Consensus 6 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~- 83 (265)
T PLN02888 6 VSENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVF-KGD- 83 (265)
T ss_pred CCCCeEEEEeccCCEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhc-cch-
Confidence 3455788885 7899999999999999999999999999999999999999999999999999999999865321 111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (350)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~ 189 (350)
.. .....++..|.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..
T Consensus 84 --~~---~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 158 (265)
T PLN02888 84 --VK---DVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGAN 158 (265)
T ss_pred --hh---HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHH
Confidence 11 1123456678899999999999999999999999999999999999999999999999999999999999998
Q ss_pred -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHh
Q 018834 190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKC 266 (350)
Q Consensus 190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 266 (350)
+++|++||++++|+||+++||||+++|++++.+.+..+ .+++..++.+++.+|+.++........... .+......+
T Consensus 159 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~ 238 (265)
T PLN02888 159 RAREVSLTAMPLTAETAERWGLVNHVVEESELLKKAREVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDY 238 (265)
T ss_pred HHHHHHHhCCccCHHHHHHcCCccEeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988876654444 678889999999999999865433322222 233445555
Q ss_pred c---CcCCHHHHHHHHhccCCCC
Q 018834 267 F---GLDTVEEIIDSLESEASLI 286 (350)
Q Consensus 267 f---~~~~~~ei~~~lek~~~~~ 286 (350)
+ +.+..+.+.++++|++|+.
T Consensus 239 ~~~~~~d~~e~~~af~ekr~~~~ 261 (265)
T PLN02888 239 YNGMTKEQFQKMQEFIAGRSSKK 261 (265)
T ss_pred hccCCHHHHHHHHHHHhcCCCCC
Confidence 3 5677777888899987643
No 51
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=1e-47 Score=357.56 Aligned_cols=251 Identities=16% Similarity=0.218 Sum_probs=207.9
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++.... ......
T Consensus 12 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~ 90 (273)
T PRK07396 12 YEDILYKSADGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGG-YVDDDG 90 (273)
T ss_pred CcceEEEecCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhccc-ccchhh
Confidence 45689999999999999999999999999999999999999999999999999999 7999999999864210 001111
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
... + ....++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 91 ~~~-~-~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a 168 (273)
T PRK07396 91 VPR-L-NVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKA 168 (273)
T ss_pred hhh-h-HHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHH
Confidence 111 1 134566778999999999999999999999999999999999999999999999999999999999999988 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF- 267 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f- 267 (350)
++|++||+.++|+||+++||||++||++++.+... .+.+++..+|.++..+|+.++..... ..... .+......++
T Consensus 169 ~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~ 247 (273)
T PRK07396 169 REIWFLCRQYDAQEALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDG-QAGLQELAGNATMLFYM 247 (273)
T ss_pred HHHHHhCCCcCHHHHHHcCCcCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999988876544 44688899999999999998764332 22222 2334555666
Q ss_pred CcCCHHHHHHHHhccCCCCC
Q 018834 268 GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 268 ~~~~~~ei~~~lek~~~~~~ 287 (350)
+.+..+.+.++++|++|.+.
T Consensus 248 ~~d~~egi~af~~kr~p~~~ 267 (273)
T PRK07396 248 TEEAQEGRNAFNEKRQPDFS 267 (273)
T ss_pred ChhHHHHHHHHhCCCCCCCC
Confidence 45666777788899887654
No 52
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.7e-48 Score=354.88 Aligned_cols=242 Identities=20% Similarity=0.314 Sum_probs=203.3
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
++.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.... ... .
T Consensus 2 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~---~ 77 (249)
T PRK05870 2 MDPVLLDVDDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAP-GRP---A 77 (249)
T ss_pred CccEEEEccCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhccc-ccc---h
Confidence 456889999999999999999999999999999999999999999999999999999999999999886421 111 1
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
...+...+.++..+.++||||||++||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 78 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~ 157 (249)
T PRK05870 78 EDGLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVAR 157 (249)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHHH
Confidence 23445566677889999999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCC-CCcchH-HHHHHHHHHhcC
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVY-PDKNSV-IHRIDIVDKCFG 268 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~-~~~~~~-~~~~~~i~~~f~ 268 (350)
+|++||++++|+||+++||||+++ +++.+ +.+.+.+++..+|.++...|+.++.... ...... ..+......+|.
T Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv--~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~ 235 (249)
T PRK05870 158 AALLFGMRFDAEAAVRHGLALMVA--DDPVAAALELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQ 235 (249)
T ss_pred HHHHhCCccCHHHHHHcCCHHHHH--hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999 45554 4445578889999999999999987543 332222 224556667775
Q ss_pred cC-CHHHHHHHHh
Q 018834 269 LD-TVEEIIDSLE 280 (350)
Q Consensus 269 ~~-~~~ei~~~le 280 (350)
.+ ..+.+.++++
T Consensus 236 ~~d~~eg~~af~~ 248 (249)
T PRK05870 236 SPEFAARLAAAQR 248 (249)
T ss_pred ChhHHHHHHHHhc
Confidence 54 4455555554
No 53
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.6e-48 Score=358.24 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=208.6
Q ss_pred CCcEEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCCh--
Q 018834 33 CNQVLVEGKA-NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL-- 109 (350)
Q Consensus 33 ~~~v~~~~~~-~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~-- 109 (350)
++.+.+++++ +|++||||||+++|++|.+|+.+|.++|+.++.|+++++|||+|.|+.||+|+|++++.........
T Consensus 4 ~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~ 83 (272)
T PRK06210 4 YDAVLYEVADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRD 83 (272)
T ss_pred cceEEEEECCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCccccccc
Confidence 3568999988 9999999999999999999999999999999999999999999999999999999987542110000
Q ss_pred HHHHHH----HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhc
Q 018834 110 EECKDF----FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 185 (350)
Q Consensus 110 ~~~~~~----~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl 185 (350)
.....+ .....+++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 163 (272)
T PRK06210 84 TDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRL 163 (272)
T ss_pred ccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhh
Confidence 000111 1122445678899999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccC-CHHHHHHHHHHHhccCCCCcch-HHHHHH
Q 018834 186 PGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTD-DPSVIEACLEKYSDLVYPDKNS-VIHRID 261 (350)
Q Consensus 186 ~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~ 261 (350)
+|.. +++|+|||++++|+||+++||||+++|++++.+...++ .+++.. +|.++...|+.++......... ...+..
T Consensus 164 ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~ 243 (272)
T PRK06210 164 VGHANALDLLLSARTFYAEEALRLGLVNRVVPPDELMERTLAYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANR 243 (272)
T ss_pred hCHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHH
Confidence 9988 99999999999999999999999999988876544444 667764 8999999999988654333222 223345
Q ss_pred HHHHhc-CcCCHHHHHHHHhccCCCC
Q 018834 262 IVDKCF-GLDTVEEIIDSLESEASLI 286 (350)
Q Consensus 262 ~i~~~f-~~~~~~ei~~~lek~~~~~ 286 (350)
.+..+| +.+..+++.++++|++|.+
T Consensus 244 ~~~~~~~~~~~~egi~af~~kr~p~~ 269 (272)
T PRK06210 244 EMHESLQRPDFIEGVASFLEKRPPRF 269 (272)
T ss_pred HHHHHhcCccHHHHHHHHhccCCCCC
Confidence 566666 4667777778889887765
No 54
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=2e-47 Score=353.42 Aligned_cols=249 Identities=17% Similarity=0.195 Sum_probs=209.2
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcC-C-CccccCCChhhHHHhhhcCChH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-G-RAFCAGGDIVSLYHFMNQGKLE 110 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~-g-~~F~aG~Dl~~~~~~~~~~~~~ 110 (350)
++.+.++.+++|++||||||+++|+||.+|+.+|.++++.++.|+ +++|||+|. + ++||+|+|++++... ...
T Consensus 3 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~--~~~-- 77 (261)
T PRK11423 3 MQYVNVVTINKIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSG--GRD-- 77 (261)
T ss_pred ccceEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhc--ccc--
Confidence 346889999999999999999999999999999999999999988 999999996 3 899999999987532 111
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL- 189 (350)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~- 189 (350)
...+....++++..|..+||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..
T Consensus 78 -~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~ 156 (261)
T PRK11423 78 -PLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHI 156 (261)
T ss_pred -HHHHHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHH
Confidence 123344556788889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCC-CCc-chHHH-HHHHHHH
Q 018834 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVY-PDK-NSVIH-RIDIVDK 265 (350)
Q Consensus 190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~-~~~-~~~~~-~~~~i~~ 265 (350)
+++|++||++++|+||+++||||+++|++++.+.... +.+++..+|.++...|+.++.... ... ..... .......
T Consensus 157 a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (261)
T PRK11423 157 VKEMFFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRA 236 (261)
T ss_pred HHHHHHcCCCcCHHHHHHcCCcCcccCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999998888765544 467888999999999999875322 111 12222 3445567
Q ss_pred hc-CcCCHHHHHHHHhccCCCCC
Q 018834 266 CF-GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 266 ~f-~~~~~~ei~~~lek~~~~~~ 287 (350)
+| +.+..+.+.++++|++|.+.
T Consensus 237 ~~~s~d~~eg~~af~~kr~p~~~ 259 (261)
T PRK11423 237 VYDSEDYQEGMNAFLEKRKPVFV 259 (261)
T ss_pred HhCChhHHHHHHHHhccCCCCCC
Confidence 77 46777778888999877653
No 55
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.8e-48 Score=354.10 Aligned_cols=244 Identities=23% Similarity=0.239 Sum_probs=201.6
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
.+.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++... ... . .
T Consensus 2 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~--~~~-~-~ 77 (254)
T PRK08259 2 SMSVRVERNGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTG--RGN-R-L 77 (254)
T ss_pred CceEEEEEECCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhcc--cch-h-h
Confidence 45689999999999999999999999999999999999999999999999999999999999999987532 111 1 1
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
... ....+...+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus 78 ~~~--~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~ 155 (254)
T PRK08259 78 HPS--GDGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAM 155 (254)
T ss_pred hhh--hcchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHHH
Confidence 100 001112223479999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhcCc
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFGL 269 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f~~ 269 (350)
+|+++|++++|+||+++||||++||++++.+.+..+ .+++..++.++..+|+.++........... .+......++..
T Consensus 156 ~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 235 (254)
T PRK08259 156 DLILTGRPVDADEALAIGLANRVVPKGQARAAAEELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVLAA 235 (254)
T ss_pred HHHHcCCccCHHHHHHcCCCCEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999887655444 689999999999999999865433322222 233334455566
Q ss_pred CCHHHHHHHHhcc
Q 018834 270 DTVEEIIDSLESE 282 (350)
Q Consensus 270 ~~~~ei~~~lek~ 282 (350)
+..+++.+|+++.
T Consensus 236 d~~egi~af~~~~ 248 (254)
T PRK08259 236 EALEGAARFAAGA 248 (254)
T ss_pred HHHHHHHHHHhhh
Confidence 7777788888765
No 56
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.3e-47 Score=349.52 Aligned_cols=243 Identities=24% Similarity=0.322 Sum_probs=204.6
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (350)
Q Consensus 36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 115 (350)
|.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++... . ...+
T Consensus 2 i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~----~---~~~~ 74 (248)
T PRK06072 2 IKVESREGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPD----F---AIDL 74 (248)
T ss_pred eEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhh----h---HHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999987531 1 1223
Q ss_pred HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhh
Q 018834 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL 195 (350)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~l 195 (350)
.+..+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..++++++
T Consensus 75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~~a~~lll 154 (248)
T PRK06072 75 RETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILV 154 (248)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhHHHHHHHH
Confidence 34456677889999999999999999999999999999999999999999999999999999999999999977999999
Q ss_pred cCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhcC-cCCHH
Q 018834 196 TGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFG-LDTVE 273 (350)
Q Consensus 196 tG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f~-~~~~~ 273 (350)
||++++|+||+++|||+.+ + +.++++.+.+.+++..++.++..+|+.++........... .+......+|. .+..+
T Consensus 155 ~g~~~~a~eA~~~Glv~~~-~-~~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~e 232 (248)
T PRK06072 155 LGGEFTAEEAERWGLLKIS-E-DPLSDAEEMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGKTEDFKE 232 (248)
T ss_pred hCCccCHHHHHHCCCcccc-c-hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhCChhHHH
Confidence 9999999999999999963 2 3344555556788889999999999998765333322222 23556667774 56677
Q ss_pred HHHHHHhccCCCCC
Q 018834 274 EIIDSLESEASLIN 287 (350)
Q Consensus 274 ei~~~lek~~~~~~ 287 (350)
.+.++++|++|.+.
T Consensus 233 g~~af~~kr~p~~~ 246 (248)
T PRK06072 233 GISSFKEKREPKFK 246 (248)
T ss_pred HHHHHhcCCCCCCC
Confidence 78888899877653
No 57
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.6e-47 Score=351.15 Aligned_cols=250 Identities=22% Similarity=0.310 Sum_probs=208.2
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
+++.|.++++++|++||||||+ .|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.... .....
T Consensus 2 ~~~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~--~~~~~ 78 (257)
T PRK06495 2 MMSQLKLEVSDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVI--KGPGD 78 (257)
T ss_pred CcceEEEEeeCCEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhcc--CCchh
Confidence 3456889999999999999998 59999999999999999999999999999999999999999999875421 11122
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G 190 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a 190 (350)
...+....+++...+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|+. |++++|++++|.. +
T Consensus 79 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a 155 (257)
T PRK06495 79 LRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLT 155 (257)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHH
Confidence 23344555677888999999999999999999999999999999999999999999999996 5678899999988 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF- 267 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f- 267 (350)
++|+++|++++|+||+++|||++++|++++.+. .+.+.+++..+|.++..+|+.+............ .+...+..++
T Consensus 156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~ 235 (257)
T PRK06495 156 RRMMLTGYRVPAAELYRRGVIEACLPPEELMPEAMEIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAK 235 (257)
T ss_pred HHHHHcCCeeCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999887654 4455788899999999999998865333322222 2345566666
Q ss_pred CcCCHHHHHHHHhccCCCCC
Q 018834 268 GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 268 ~~~~~~ei~~~lek~~~~~~ 287 (350)
+.+..+.+.++++|++|.+.
T Consensus 236 s~d~~egi~af~~kr~p~~~ 255 (257)
T PRK06495 236 TEDAKEAQRAFLEKRPPVFK 255 (257)
T ss_pred ChHHHHHHHHHhccCCCCCC
Confidence 45667777788899887653
No 58
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=4.6e-47 Score=348.96 Aligned_cols=242 Identities=20% Similarity=0.261 Sum_probs=202.6
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (350)
Q Consensus 36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 115 (350)
|.++++++|++||||||+ .|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.. .....+
T Consensus 3 v~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~-------~~~~~~ 74 (251)
T TIGR03189 3 VWLERDGKLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMP-------DQCAAM 74 (251)
T ss_pred EEEEeeCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCc-------hhHHHH
Confidence 678889999999999997 599999999999999999999999999999999999999999997531 111234
Q ss_pred HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (350)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ 194 (350)
+....+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ |++++|++++|.. +++|+
T Consensus 75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~-~~~~~l~~~vg~~~a~~l~ 153 (251)
T TIGR03189 75 LASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAP-AASCLLPERMGRVAAEDLL 153 (251)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCC-chHHHHHHHhCHHHHHHHH
Confidence 445567888899999999999999999999999999999999999999999999999997 4678999999988 99999
Q ss_pred hcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH--HHHHHHHHhcC-cC
Q 018834 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI--HRIDIVDKCFG-LD 270 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~i~~~f~-~~ 270 (350)
|||++++|+||+++|||++++|+.+ +...+.+ .+++..+|.++..+|+.++........... .+...+..+|. .+
T Consensus 154 ltg~~~~a~eA~~~Glv~~v~~~~~-~~a~~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~s~d 232 (251)
T TIGR03189 154 YSGRSIDGAEGARIGLANAVAEDPE-NAALAWFDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMATHD 232 (251)
T ss_pred HcCCCCCHHHHHHCCCcceecCcHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhCCHh
Confidence 9999999999999999999998643 3444444 678889999999999998765433322222 23445667774 56
Q ss_pred CHHHHHHHHhccCCCCC
Q 018834 271 TVEEIIDSLESEASLIN 287 (350)
Q Consensus 271 ~~~ei~~~lek~~~~~~ 287 (350)
..+.+.++++|++|.|.
T Consensus 233 ~~eg~~af~ekr~p~~~ 249 (251)
T TIGR03189 233 AVEGLNAFLEKRPALWE 249 (251)
T ss_pred HHHHHHHHHhcCCCCCC
Confidence 67778888999987653
No 59
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.3e-47 Score=347.65 Aligned_cols=237 Identities=21% Similarity=0.298 Sum_probs=200.4
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (350)
Q Consensus 36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 115 (350)
+.++++++|++||||||++.|+||.+|+.+|.+++++++.| ++++|||||.|+.||+|+|+++... ...+
T Consensus 2 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~---------~~~~ 71 (243)
T PRK07854 2 IGVTRDGQVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY---------ADDF 71 (243)
T ss_pred ceEEEeCCEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh---------HHHH
Confidence 56788899999999999999999999999999999999865 8999999999999999999985211 1223
Q ss_pred HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (350)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ 194 (350)
....++++..+.++|||+||++||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus 72 ~~~~~~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ 151 (243)
T PRK07854 72 PDALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAML 151 (243)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHH
Confidence 44456678889999999999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred hcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcC-cCCHH
Q 018834 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-LDTVE 273 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~-~~~~~ 273 (350)
+||++++|+||+++|||+++++ ++++.+.+++++..++.++...|+.++.. .........+......+|. .+..+
T Consensus 152 ltg~~~~a~eA~~~Glv~~v~~---~~~a~~~a~~l~~~~~~a~~~~K~~l~~~-~~~~~~~~~e~~~~~~~~~~~d~~e 227 (243)
T PRK07854 152 LGAEKLTAEQALATGMANRIGT---LADAQAWAAEIAGLAPLALQHAKRVLNDD-GAIEEAWPAHKELFDKAWASQDAIE 227 (243)
T ss_pred HcCCCcCHHHHHHCCCcccccC---HHHHHHHHHHHHhCCHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHhcCchHHH
Confidence 9999999999999999999975 34555556788889999999999998764 2111122223556677774 56666
Q ss_pred HHHHHHhccCCCC
Q 018834 274 EIIDSLESEASLI 286 (350)
Q Consensus 274 ei~~~lek~~~~~ 286 (350)
.+.++++|++|.+
T Consensus 228 g~~af~~kr~p~~ 240 (243)
T PRK07854 228 AQVARIEKRPPKF 240 (243)
T ss_pred HHHHHhCCCCCCC
Confidence 6778888887754
No 60
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.2e-47 Score=350.16 Aligned_cols=251 Identities=21% Similarity=0.209 Sum_probs=208.4
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
...+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.... ....+..
T Consensus 5 ~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~ 83 (260)
T PRK07827 5 DTLVRYAVDGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGG-GDPYDAA 83 (260)
T ss_pred CcceEEEeeCCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcc-cCchhHH
Confidence 346888999999999999999999999999999999999999999999999999999999999999875421 1111222
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 192 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~ 192 (350)
..++....++++.+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++++++..+++
T Consensus 84 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~~~a~~ 163 (260)
T PRK07827 84 VARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAAR 163 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhHHHHHH
Confidence 34556667788899999999999999999999999999999999999999999999999999999999999987766999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcC-c
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFG-L 269 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~-~ 269 (350)
|+++|++++|+||+++|||+++++ ++++. .+.+.+++..++.++..+|+.++.......... .........+|. .
T Consensus 164 l~l~g~~~~a~eA~~~Glv~~v~~--~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (260)
T PRK07827 164 YYLTGEKFGAAEAARIGLVTAAAD--DVDAAVAALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFVSD 241 (260)
T ss_pred HHHhCCccCHHHHHHcCCcccchH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCh
Confidence 999999999999999999999975 36544 444568888899999999999987544332222 223455666774 5
Q ss_pred CCHHHHHHHHhccCCCC
Q 018834 270 DTVEEIIDSLESEASLI 286 (350)
Q Consensus 270 ~~~~ei~~~lek~~~~~ 286 (350)
+..+.+.++++|+.|.+
T Consensus 242 ~~~~~~~af~~kr~p~~ 258 (260)
T PRK07827 242 EAREGMTAFLQKRPPRW 258 (260)
T ss_pred hHHHHHHHHhcCCCCCC
Confidence 66666777788876654
No 61
>PLN02921 naphthoate synthase
Probab=100.00 E-value=4.5e-47 Score=359.85 Aligned_cols=252 Identities=17% Similarity=0.223 Sum_probs=209.8
Q ss_pred CCCcEEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCC
Q 018834 32 LCNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK 108 (350)
Q Consensus 32 ~~~~v~~~~--~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~ 108 (350)
.++.|.+++ +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... ...
T Consensus 63 ~~~~i~~~~~~~~~Va~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~-~~~ 141 (327)
T PLN02921 63 EFTDIIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDG-YVG 141 (327)
T ss_pred CCceEEEEEecCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhccc-ccc
Confidence 456788887 589999999999999999999999999999999999999999999999 8999999999864210 011
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (350)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~ 188 (350)
.+....+ ...+++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.
T Consensus 142 ~~~~~~~--~~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~ 219 (327)
T PLN02921 142 PDDAGRL--NVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQ 219 (327)
T ss_pred hhHHHHH--HHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCH
Confidence 1111111 12456778899999999999999999999999999999999999999999999999999999999999998
Q ss_pred H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchHHH-HHHHHHH
Q 018834 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-RIDIVDK 265 (350)
Q Consensus 189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~i~~ 265 (350)
. +++|++||+.++|+||+++|||++++|++++.+... .+.+++..++.+++.+|+.++..... ...... ....+..
T Consensus 220 ~~A~ellltG~~~~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~ 298 (327)
T PLN02921 220 KKAREMWFLARFYTASEALKMGLVNTVVPLDELEGETVKWCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLL 298 (327)
T ss_pred HHHHHHHHcCCcCCHHHHHHCCCceEEeCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHH
Confidence 8 999999999999999999999999999988876544 44689999999999999998765332 222222 2355666
Q ss_pred hc-CcCCHHHHHHHHhccCCCCC
Q 018834 266 CF-GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 266 ~f-~~~~~~ei~~~lek~~~~~~ 287 (350)
+| +.+..+++.+|++|++|.|.
T Consensus 299 ~~~s~d~~egi~Af~ekr~p~f~ 321 (327)
T PLN02921 299 FYGSEEGNEGRTAYLEGRAPDFS 321 (327)
T ss_pred HhcCHHHHHHHHHHhccCCCCCC
Confidence 67 56777778888999988754
No 62
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=1e-47 Score=352.60 Aligned_cols=241 Identities=30% Similarity=0.480 Sum_probs=212.2
Q ss_pred EEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHH
Q 018834 37 LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFF 116 (350)
Q Consensus 37 ~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~ 116 (350)
.++.+++|++|+||||++.|++|.+|+.+|.++|+.++.|+++++||++|.++.||+|+|++++... +.+....+.
T Consensus 1 ~~~~~~~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~----~~~~~~~~~ 76 (245)
T PF00378_consen 1 KYEIEDGVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNS----DEEEAREFF 76 (245)
T ss_dssp EEEEETTEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHH----HHHHHHHHH
T ss_pred CEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhcc----ccccccccc
Confidence 4788999999999999999999999999999999999999999999999999999999999998865 345567788
Q ss_pred HHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhh
Q 018834 117 RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLAL 195 (350)
Q Consensus 117 ~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~l 195 (350)
+..+.++..+..+|||+||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. ++++++
T Consensus 77 ~~~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l 156 (245)
T PF00378_consen 77 RRFQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLL 156 (245)
T ss_dssp HHHHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccccchhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeeccccccccc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999998 999999
Q ss_pred cCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCc-chHHHHHHHHHHhcC-cCCH
Q 018834 196 TGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRIDIVDKCFG-LDTV 272 (350)
Q Consensus 196 tG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~i~~~f~-~~~~ 272 (350)
||++++|+||+++||||+++|++++.+.. +.+.+++..++.++...|+.++....... .........+..++. .+..
T Consensus 157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (245)
T PF00378_consen 157 TGEPISAEEALELGLVDEVVPDEELDEEALELAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFKSEDFQ 236 (245)
T ss_dssp HTCEEEHHHHHHTTSSSEEESGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred ccccchhHHHHhhcceeEEcCchhhhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999987654 44578899999999999999987533222 223334667777884 5666
Q ss_pred HHHHHHHhc
Q 018834 273 EEIIDSLES 281 (350)
Q Consensus 273 ~ei~~~lek 281 (350)
+.+.+++||
T Consensus 237 e~~~~f~eK 245 (245)
T PF00378_consen 237 EGIAAFLEK 245 (245)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhCc
Confidence 667677775
No 63
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=9.5e-47 Score=355.48 Aligned_cols=255 Identities=15% Similarity=0.160 Sum_probs=207.3
Q ss_pred CCcEEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-------CccccCCChhhHHHh
Q 018834 33 CNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-------RAFCAGGDIVSLYHF 103 (350)
Q Consensus 33 ~~~v~~~~--~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-------~~F~aG~Dl~~~~~~ 103 (350)
+.++.+++ +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++...
T Consensus 22 ~~~i~~~~~~~~~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~ 101 (302)
T PRK08321 22 FTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRD 101 (302)
T ss_pred ceeEEEEEecCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccc
Confidence 34688888 899999999999999999999999999999999999999999999998 599999999976321
Q ss_pred h---hcCCh-H--HHHHHH-HHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEe-CCeeEecccccccccCC
Q 018834 104 M---NQGKL-E--ECKDFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPD 175 (350)
Q Consensus 104 ~---~~~~~-~--~~~~~~-~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riat-e~a~f~~Pe~~iGl~P~ 175 (350)
. ..... . ...... ...+.+...+..+||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~ 181 (302)
T PRK08321 102 GYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDG 181 (302)
T ss_pred cccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCC
Confidence 0 00000 0 001111 112346667889999999999999999999999999999999 69999999999999999
Q ss_pred CchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCc
Q 018834 176 AGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDK 253 (350)
Q Consensus 176 ~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~ 253 (350)
+|++++|+|++|.. +++|++||+.++|+||+++|||+++||++++.+... .+.+++..++.+++.+|+.++.......
T Consensus 182 ~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~ 261 (302)
T PRK08321 182 GYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPHAELETEALEWAREINGKSPTAMRMLKYAFNLTDDGLV 261 (302)
T ss_pred chHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcccH
Confidence 99999999999998 999999999999999999999999999988876544 4468889999999999999876433222
Q ss_pred chHHHHHHHHHHhcC-cCCHHHHHHHHhccCCCCC
Q 018834 254 NSVIHRIDIVDKCFG-LDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 254 ~~~~~~~~~i~~~f~-~~~~~ei~~~lek~~~~~~ 287 (350)
.....+......+|. .+..+.+.++++|++|.+.
T Consensus 262 ~~~~~e~~~~~~~~~~~d~~egi~af~ekr~p~~~ 296 (302)
T PRK08321 262 GQQLFAGEATRLAYMTDEAQEGRDAFLEKRDPDWS 296 (302)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHhccCCCCCC
Confidence 222233455666774 5667778888999887653
No 64
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.3e-46 Score=345.75 Aligned_cols=240 Identities=20% Similarity=0.223 Sum_probs=205.1
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
++.++++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||+|.|+.||+|+|++++.... . . .
T Consensus 4 ~~~~~~~~~~~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~-~-~-- 78 (249)
T PRK07110 4 KVVELREVEEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQ-T-G-K-- 78 (249)
T ss_pred CceEEEEeeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhcc-c-h-h--
Confidence 457889999999999999999999999999999999999999999999999999999999999999875421 1 1 1
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
.. +.. +.++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.
T Consensus 79 ~~-~~~-~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~ 156 (249)
T PRK07110 79 GT-FTE-ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALGQ 156 (249)
T ss_pred hh-Hhh-HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHHH
Confidence 11 222 5678889999999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcCc
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFGL 269 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~~ 269 (350)
+|++||++++++||+++|||++++|++++.+ +.+.+.+++..++.++...|+.++.......... ..+...+..+|..
T Consensus 157 ~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~ 236 (249)
T PRK07110 157 EMLLTARYYRGAELKKRGVPFPVLPRAEVLEKALELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFHQ 236 (249)
T ss_pred HHHHcCCccCHHHHHHcCCCeEEeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999888765 4555578889999999999999986544333222 2335566777776
Q ss_pred CCHHHHHHHH
Q 018834 270 DTVEEIIDSL 279 (350)
Q Consensus 270 ~~~~ei~~~l 279 (350)
++..+.++.|
T Consensus 237 ~~~~egi~~~ 246 (249)
T PRK07110 237 PEVKRRIESL 246 (249)
T ss_pred HhHHHHHHHh
Confidence 6666666554
No 65
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.3e-46 Score=345.38 Aligned_cols=212 Identities=25% Similarity=0.308 Sum_probs=189.2
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++... ..+..
T Consensus 3 ~~~v~~~~~~~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~----~~~~~ 78 (258)
T PRK06190 3 EPILLVETHDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGD----GSAYG 78 (258)
T ss_pred CceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcc----cchhh
Confidence 34689999999999999999999999999999999999999999999999999999999999999987532 11111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
. ....+.++..|.++|||+||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. ++
T Consensus 79 ~--~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 156 (258)
T PRK06190 79 A--QDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRAR 156 (258)
T ss_pred H--HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 1 22345677889999999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCC
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVY 250 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~ 250 (350)
+|++||++++|+||+++||||+++|++++.+.+. .+.+++..+|.+++..|+.++....
T Consensus 157 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~ 216 (258)
T PRK06190 157 RMSLTGDFLDAADALRAGLVTEVVPHDELLPRARRLAASIAGNNPAAVRALKASYDDGAA 216 (258)
T ss_pred HHHHhCCccCHHHHHHcCCCeEecCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999888776444 4468889999999999999986543
No 66
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-46 Score=345.42 Aligned_cols=239 Identities=22% Similarity=0.198 Sum_probs=198.4
Q ss_pred EEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHH
Q 018834 39 EGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT 118 (350)
Q Consensus 39 ~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 118 (350)
+++++|++||||||++ |+||.+|+.+|.++++.++.|++||+|||+|.|++||+|+|++++... ........+.+.
T Consensus 7 ~~~~~v~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~---~~~~~~~~~~~~ 82 (249)
T PRK07938 7 TPEPGIAEVTVDYPPV-NALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT---PGFTALIDANRG 82 (249)
T ss_pred ccCCCEEEEEECCCCc-ccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhc---cchhHHHHHHHH
Confidence 4578999999999985 999999999999999999999999999999999999999999987532 111222223344
Q ss_pred HHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhcC
Q 018834 119 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTG 197 (350)
Q Consensus 119 ~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ltG 197 (350)
...++..|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++ |++++|+|++|.. +++|++||
T Consensus 83 ~~~~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg 159 (249)
T PRK07938 83 CFAAFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTA 159 (249)
T ss_pred HHHHHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhC
Confidence 4567788999999999999999999999999999999999999999999999985 5678899999988 99999999
Q ss_pred CCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcC-cCCHHH
Q 018834 198 AKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFG-LDTVEE 274 (350)
Q Consensus 198 ~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~-~~~~~e 274 (350)
++++|+||+++|||+++||++++.+.... +.+++..++.++..+|+.++.......... ..+......+|. .+..++
T Consensus 160 ~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg 239 (249)
T PRK07938 160 ATITAAELHHFGSVEEVVPRDQLDEAALEVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNLAGVSDEH 239 (249)
T ss_pred CcCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCccHHHH
Confidence 99999999999999999999888765444 468889999999999999976533322222 223556667774 566677
Q ss_pred HHHHHhccCC
Q 018834 275 IIDSLESEAS 284 (350)
Q Consensus 275 i~~~lek~~~ 284 (350)
+.+|++|++|
T Consensus 240 ~~af~ekr~p 249 (249)
T PRK07938 240 RDAFVEKRKA 249 (249)
T ss_pred HHHHHhcCCC
Confidence 7788888753
No 67
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=4e-46 Score=347.37 Aligned_cols=249 Identities=18% Similarity=0.204 Sum_probs=204.5
Q ss_pred CCCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC--CccccCCChhhHHHhhhcC
Q 018834 31 DLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG--RAFCAGGDIVSLYHFMNQG 107 (350)
Q Consensus 31 ~~~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g--~~F~aG~Dl~~~~~~~~~~ 107 (350)
.....|.+++ +++|++||||||+ .|+||.+|+.+|.+++++++.|+++++|||||.| ++||+|+|++++... ..
T Consensus 8 ~~~~~i~~~~~~~~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~--~~ 84 (278)
T PLN03214 8 GATPGVRVDRRPGGIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAP--KT 84 (278)
T ss_pred CCCCceEEEEcCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhcc--cc
Confidence 3455789998 6999999999985 6999999999999999999999999999999997 699999999987531 11
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccc-cCCCchHHHHhhcc
Q 018834 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF-HPDAGASFYLSHLP 186 (350)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl-~P~~G~s~~L~rl~ 186 (350)
..+....+......++..|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|+ +|++|++++|++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~ 164 (278)
T PLN03214 85 SAARYAEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVI 164 (278)
T ss_pred chHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhc
Confidence 11222334444456777899999999999999999999999999999999999999999999999 59999999999999
Q ss_pred HHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHH
Q 018834 187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIV 263 (350)
Q Consensus 187 g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i 263 (350)
|.. +++|++||+.++|+||+++||||+++|++++.+.. +.+.+++..++.++..+|+.++......... ...+...+
T Consensus 165 G~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~ 244 (278)
T PLN03214 165 DRKVAESLLLRGRLVRPAEAKQLGLIDEVVPAAALMEAAASAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGG 244 (278)
T ss_pred CHHHHHHHHHcCCccCHHHHHHcCCCcEecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 988 99999999999999999999999999998876544 4446788999999999999988653322222 22234555
Q ss_pred HHhcC-cCCHHHHHHHHhcc
Q 018834 264 DKCFG-LDTVEEIIDSLESE 282 (350)
Q Consensus 264 ~~~f~-~~~~~ei~~~lek~ 282 (350)
..++. .+..+.+.++++|.
T Consensus 245 ~~~~~s~d~~egi~aflek~ 264 (278)
T PLN03214 245 WKMLSEPSIIKALGGVMERL 264 (278)
T ss_pred HHHhCCHHHHHHHHHHHHHH
Confidence 66674 45556666667664
No 68
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=5.5e-46 Score=342.74 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=201.9
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 112 (350)
++.+.++++++|++||||||++.|++|.+|+.+|.++++.++ +++++|||+|.|++||+|+|++++....... ...
T Consensus 3 ~~~i~~~~~~~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~~~~--~~~ 78 (255)
T PRK07112 3 YQTIRVRQQGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKPDAG--RAD 78 (255)
T ss_pred CceEEEEeeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhccccc--hhh
Confidence 356899999999999999999999999999999999999998 3699999999999999999999876421111 111
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
.......+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++| +.+|++++|.. ++
T Consensus 79 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~ 157 (255)
T PRK07112 79 LIDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAH 157 (255)
T ss_pred hhhHHHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHH
Confidence 11233446778889999999999999999999999999999999999999999999999999875 46789999988 99
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-CcC
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-GLD 270 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-~~~ 270 (350)
+|++||+.++|+||+++||||+++|+++. ...+.+.+++..+|.++..+|+.+.............+......+| +.+
T Consensus 158 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~~-~~~~~a~~l~~~~p~a~~~~K~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 236 (255)
T PRK07112 158 YMTLMTQPVTAQQAFSWGLVDAYGANSDT-LLRKHLLRLRCLNKAAVARYKSYASTLDDTVAAARPAALAANIEMFADPE 236 (255)
T ss_pred HHHHhCCcccHHHHHHcCCCceecCcHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHcChH
Confidence 99999999999999999999999997653 3445557888889999999999887532211122222345556677 456
Q ss_pred CHHHHHHHHhccCCCCC
Q 018834 271 TVEEIIDSLESEASLIN 287 (350)
Q Consensus 271 ~~~ei~~~lek~~~~~~ 287 (350)
..+.+.++++|++|.+.
T Consensus 237 ~~eg~~af~~kr~p~~~ 253 (255)
T PRK07112 237 NLRKIARYVETGKFPWE 253 (255)
T ss_pred HHHHHHHHHcCCCCCCC
Confidence 67777788898877653
No 69
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.7e-46 Score=351.57 Aligned_cols=250 Identities=20% Similarity=0.207 Sum_probs=198.8
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhh-HHH---hhh-cCC
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS-LYH---FMN-QGK 108 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~-~~~---~~~-~~~ 108 (350)
+.+.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||||.|++||+|+|+++ +.. ... .+.
T Consensus 5 ~~v~~~~~~~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~ 84 (298)
T PRK12478 5 QTLLYTTAGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGR 84 (298)
T ss_pred eEEEEeccCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccc
Confidence 458899999999999999999999999999999999999999999999999999999999999986 211 000 000
Q ss_pred hHHHHHH---HHHH---HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccc-cccCCCchHHH
Q 018834 109 LEECKDF---FRTL---YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI-GFHPDAGASFY 181 (350)
Q Consensus 109 ~~~~~~~---~~~~---~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~i-Gl~P~~G~s~~ 181 (350)
......+ .... ..++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++ |++| |+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~- 161 (298)
T PRK12478 85 WDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW- 161 (298)
T ss_pred cCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH-
Confidence 0001111 1111 234567889999999999999999999999999999999999999999997 8875 3344
Q ss_pred HhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCC-C-CcchHH
Q 018834 182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVY-P-DKNSVI 257 (350)
Q Consensus 182 L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~-~-~~~~~~ 257 (350)
+ +.+|.. +++|++||++++|+||+++|||+++||++++.+.+..+ .+++..+|.++...|+.++.... . ......
T Consensus 162 ~-~~vG~~~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~ 240 (298)
T PRK12478 162 L-YRLSLAKVKWHSLTGRPLTGVQAAEAELINEAVPFERLEARVAEVATELARIPLSQLQAQKLIVNQAYENMGLASTQT 240 (298)
T ss_pred H-HHhhHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 3 447877 99999999999999999999999999999887655544 68889999999999999886433 1 222333
Q ss_pred HHHHHHHHhcCcCCH---------HHHHHHHhccCCCCC
Q 018834 258 HRIDIVDKCFGLDTV---------EEIIDSLESEASLIN 287 (350)
Q Consensus 258 ~~~~~i~~~f~~~~~---------~ei~~~lek~~~~~~ 287 (350)
.+...+..++..++. +++.+|++|++|.|.
T Consensus 241 ~e~~~~~~~~~s~d~~e~~~~~~~egv~Af~ekR~p~f~ 279 (298)
T PRK12478 241 LGGILDGLMRNTPDALEFIRTAETQGVRAAVERRDGPFG 279 (298)
T ss_pred HHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 345667777765554 478899999987653
No 70
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=6.2e-46 Score=335.33 Aligned_cols=209 Identities=21% Similarity=0.303 Sum_probs=184.2
Q ss_pred CcEEEEEe-----CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCC
Q 018834 34 NQVLVEGK-----ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108 (350)
Q Consensus 34 ~~v~~~~~-----~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~ 108 (350)
+.|.++.. ++|++||||||++ |+||.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++....
T Consensus 3 ~~~~~~~~~~~~~~~i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~---- 77 (222)
T PRK05869 3 EFVNVVVSDGSQDAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLS---- 77 (222)
T ss_pred cchhhhcccCcccCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccC----
Confidence 44555544 8999999999985 9999999999999999999999999999999999999999999875421
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (350)
Q Consensus 109 ~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~ 188 (350)
......+++...+++.++.++||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 78 ~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~ 157 (222)
T PRK05869 78 AQEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGP 157 (222)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCH
Confidence 11222334445678889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhc
Q 018834 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSD 247 (350)
Q Consensus 189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~ 247 (350)
. ++++++||++++|+||+++||||+++|++++.+.... +++++..++.++..+|+.++.
T Consensus 158 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~~~~ 218 (222)
T PRK05869 158 SRAKELVFSGRFFDAEEALALGLIDEMVAPDDVYDAAAAWARRFLDGPPHALAAAKAGISD 218 (222)
T ss_pred HHHHHHHHcCCCcCHHHHHHCCCCCEeeCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 8 9999999999999999999999999999888764444 468889999999999988764
No 71
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=2.5e-44 Score=335.32 Aligned_cols=219 Identities=16% Similarity=0.184 Sum_probs=176.1
Q ss_pred CCcccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHc-----CCCceEEEEEcC-CCccccCCChhh
Q 018834 26 SSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWEN-----DPNIGFVSMKGS-GRAFCAGGDIVS 99 (350)
Q Consensus 26 ~~~~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~-----d~~v~~vvl~g~-g~~F~aG~Dl~~ 99 (350)
|.+..-.+-.|.++.+++|++|||| |++.|+||.+|+.+|.+++++++. |++|++|||+|. |+.||+|+|+++
T Consensus 9 ~~~~~~~~~~i~~e~~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~ 87 (287)
T PRK08788 9 PEAGELSQLRVYYEEERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLAL 87 (287)
T ss_pred ccccccCceEEEEEccCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHH
Confidence 3333334456777788999999996 999999999999999999999998 899999999999 799999999998
Q ss_pred HHHhhhcCChHHHHHHHHHHHHHHHHHh---cCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCC
Q 018834 100 LYHFMNQGKLEECKDFFRTLYSFIYLLG---THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA 176 (350)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~---~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~ 176 (350)
+......+..+....+.+..+..+..+. .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~ 167 (287)
T PRK08788 88 FAELIRAGDRDALLAYARACVDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGM 167 (287)
T ss_pred HhhhccccchHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCc
Confidence 7532111111211222233333333333 7999999999999999999999999999999999999999999999999
Q ss_pred chHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccC--CHHHHHHHHHHH
Q 018834 177 GASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTD--DPSVIEACLEKY 245 (350)
Q Consensus 177 G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~--~~~~i~~~~~~~ 245 (350)
|++++|++++|.. +++|++||+.++|+||+++||||+++|++++.+...+ +.+++.. ++..+...++..
T Consensus 168 g~~~~l~~~vG~~~A~ellltG~~l~A~eA~~~GLV~~vv~~~el~~~a~~~a~~ia~~~~~~~a~k~~~~~~ 240 (287)
T PRK08788 168 GAYSFLARRVGPKLAEELILSGKLYTAEELHDMGLVDVLVEDGQGEAAVRTFIRKSKRKLNGWRAMLRARRRV 240 (287)
T ss_pred hHHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHHHHHHHHhcCccHHHHHHHHHHhh
Confidence 9999999999988 9999999999999999999999999999888654444 4566654 334444455443
No 72
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-44 Score=337.80 Aligned_cols=211 Identities=22% Similarity=0.249 Sum_probs=171.0
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhh-c-----
Q 018834 33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-Q----- 106 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~----- 106 (350)
++.+.++.+++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|+.||+|+|++++..... .
T Consensus 3 ~~~v~~~~~~~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 82 (288)
T PRK08290 3 YEYVRYEVAGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQ 82 (288)
T ss_pred CceEEEEeeCCEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCcccccccccccccccc
Confidence 3458899999999999999999999999999999999999999999999999999999999999998632111 0
Q ss_pred -----------CC-hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccC
Q 018834 107 -----------GK-LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 174 (350)
Q Consensus 107 -----------~~-~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P 174 (350)
.. .............+...|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|+ |
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~ 161 (288)
T PRK08290 83 HPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-P 161 (288)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-C
Confidence 00 0011112233445677889999999999999999999999999999999999999999999998 5
Q ss_pred CCchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHH
Q 018834 175 DAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKY 245 (350)
Q Consensus 175 ~~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~ 245 (350)
+ ++++++++++|.. +++|+|||+.++|+||+++|||+++||++++.+....+ .+++..++.++..+|+.+
T Consensus 162 ~-~~~~~l~~~iG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~ 233 (288)
T PRK08290 162 G-VEYFAHPWELGPRKAKELLFTGDRLTADEAHRLGMVNRVVPRDELEAETLELARRIAAMPPFGLRLTKRAV 233 (288)
T ss_pred c-chHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4 4577789999988 99999999999999999999999999987766433333 344444444444444443
No 73
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=3e-44 Score=372.83 Aligned_cols=279 Identities=18% Similarity=0.255 Sum_probs=218.6
Q ss_pred cEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 35 ~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++..... .......
T Consensus 7 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~~~~ 85 (715)
T PRK11730 7 TLQVDWLEDGIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFA-APEEELS 85 (715)
T ss_pred eEEEEEcCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhcc-CCHHHHH
Confidence 567774 78999999999999999999999999999999999999999999999999999999998764211 1222334
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.+.+..++++.+|..+|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. +++
T Consensus 86 ~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~ 165 (715)
T PRK11730 86 QWLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALE 165 (715)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHH
Confidence 5566667788899999999999999999999999999999999999999999999999999999999999999988 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCC
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 271 (350)
|++||++++|+||+++||||+++|++++.+.+..+ .+++..+.... .... ....... . ..+..++
T Consensus 166 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~-----~~~~-~~~~p~a-~---~~~~~~~---- 231 (715)
T PRK11730 166 WIAAGKDVRAEDALKVGAVDAVVAPEKLQEAALALLKQAIAGKLDWK-----ARRQ-PKLEPLK-L---SKIEAMM---- 231 (715)
T ss_pred HHHcCCcCCHHHHHHCCCCeEecCHHHHHHHHHHHHHHHhhcCCccc-----cccC-ccccccc-c---cchhHHH----
Confidence 99999999999999999999999998876554444 34443211000 0000 0000000 0 0000000
Q ss_pred HHHHHHHHhccCCCCCcHHHHHH-HHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCccc
Q 018834 272 VEEIIDSLESEASLINDPWCGST-LRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLL 347 (350)
Q Consensus 272 ~~ei~~~lek~~~~~~~~~a~~~-l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~~~ 347 (350)
.+ .+.++. .++..+++|.++ .++++++++.. .+++++++.|.+.+..++.++|.+-.
T Consensus 232 ---~~------------~~~k~~~~~~~~~~~pa~~-~~~~~i~~~~~---~~~~~~l~~E~~~~~~~~~s~d~~eg 289 (715)
T PRK11730 232 ---SF------------TTAKGMVAQKAGKHYPAPM-TAVKTIEAAAG---LGRDEALELEAKGFVKLAKTNVARAL 289 (715)
T ss_pred ---HH------------HHHHHHHHHhhccCCccHH-HHHHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 00 111211 245577899888 55999999998 89999999999999999999987643
No 74
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.7e-44 Score=335.75 Aligned_cols=214 Identities=20% Similarity=0.231 Sum_probs=183.8
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcC--C-
Q 018834 32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--K- 108 (350)
Q Consensus 32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--~- 108 (350)
.++.|.++.+++|++||||||+++|++|.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++....... .
T Consensus 8 ~~~~v~~e~~~~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~ 87 (302)
T PRK08272 8 NLKTMTYEVTGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGG 87 (302)
T ss_pred CCCeEEEEeECCEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhccccccccc
Confidence 3567999999999999999999999999999999999999999999999999999999999999999986432100 0
Q ss_pred ----------------hH--HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccc
Q 018834 109 ----------------LE--ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI 170 (350)
Q Consensus 109 ----------------~~--~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~i 170 (350)
.. ....++...++++..|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~ 167 (302)
T PRK08272 88 AYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRV 167 (302)
T ss_pred ccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhc
Confidence 00 001234555677888999999999999999999999999999999999999999999998
Q ss_pred cccCCCchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhcc
Q 018834 171 GFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDL 248 (350)
Q Consensus 171 Gl~P~~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~ 248 (350)
|.+|.. ..+++++|.. +++|+|||++++|+||+++|||++++|++++.+....+ .+++..++.++...|+.++..
T Consensus 168 gg~~~~---~~~~~~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~la~~ia~~~~~a~~~~K~~l~~~ 244 (302)
T PRK08272 168 WGVPAT---GMWAYRLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPEELDERTERLVERIAAVPVNQLAMVKLAVNSA 244 (302)
T ss_pred ccCChH---HHHHHHhhHHHHHHHHHcCCccCHHHHHHcCCCceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 666643 3567788888 99999999999999999999999999998887655554 678899999999999988764
No 75
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=1.2e-43 Score=354.49 Aligned_cols=248 Identities=13% Similarity=0.083 Sum_probs=207.4
Q ss_pred EEEEEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHHc-CCCceEEEEEcCCCc-cccCCChhhH
Q 018834 36 VLVEGKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSGRA-FCAGGDIVSL 100 (350)
Q Consensus 36 v~~~~~~~v~~ItLnrp~~~-------------Nal~~~m~~~L~~~l~~~~~-d~~v~~vvl~g~g~~-F~aG~Dl~~~ 100 (350)
+.++++++|++||||||+++ |+|+.+|+.+|.+++.+++. |++|++|||||.|+. ||+|+|++..
T Consensus 260 v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~ 339 (546)
T TIGR03222 260 VAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLE 339 (546)
T ss_pred EEEeccCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCcccc
Confidence 45567899999999999999 99999999999999999984 599999999999987 9999999842
Q ss_pred HHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE-CCcccccc-cccccccCEEEE-------eCCeeEeccccccc
Q 018834 101 YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL-NGVTMGGG-AGVSIPGTFRVA-------CGKTVFATPETLIG 171 (350)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i-~G~~~GgG-~~Lal~~D~ria-------te~a~f~~Pe~~iG 171 (350)
. ..+.......+....+++..|..+|||+||+| ||+|+||| ++|+++||+||+ +++++|++||+++|
T Consensus 340 ~----~~~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lG 415 (546)
T TIGR03222 340 A----HKDHWFVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFG 415 (546)
T ss_pred c----cccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccc
Confidence 1 11111112233334457788999999999999 89999999 999999999999 89999999999999
Q ss_pred ccCCCchHHHHhhcc-HHH-H--HHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHh
Q 018834 172 FHPDAGASFYLSHLP-GHL-G--EFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYS 246 (350)
Q Consensus 172 l~P~~G~s~~L~rl~-g~~-a--~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~ 246 (350)
++|++|++++|+|++ |.. + +++++||++++|+||+++|||++++|++++.+ ..+.+.+++..+|.+++..|+.++
T Consensus 416 l~p~~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~ 495 (546)
T TIGR03222 416 LYPMVNGLSRLATRFYAEPAPVAAVRDKIGQALDAEEAERLGLVTAAPDDIDWEDEIRIALEERASFSPDALTGLEANLR 495 (546)
T ss_pred cCCCcCcHHHHHHHhcCchhHHHHHHHHhCCCCCHHHHHHcCCcccccCchHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 999999999999998 875 6 55999999999999999999999999988865 445557899999999999999888
Q ss_pred ccCCCCcchH--HHHHHHHHHhcC-cCCHH---HHHHHHhccCCCCC
Q 018834 247 DLVYPDKNSV--IHRIDIVDKCFG-LDTVE---EIIDSLESEASLIN 287 (350)
Q Consensus 247 ~~~~~~~~~~--~~~~~~i~~~f~-~~~~~---ei~~~lek~~~~~~ 287 (350)
.......+.. ..+.+++..+|. .+..+ ++.+|+||++|+|.
T Consensus 496 ~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~ekr~p~f~ 542 (546)
T TIGR03222 496 FAGPETMETRIFGRLTAWQNWIFNRPNAVGENGALKVYGSGKKAQFD 542 (546)
T ss_pred hcCCcChhhhHHHHHHHHHHHHhcCCcccchhhHHHHHccCCCCCCC
Confidence 7654433332 334777889995 56666 59999999998875
No 76
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=100.00 E-value=1.5e-43 Score=366.92 Aligned_cols=281 Identities=17% Similarity=0.255 Sum_probs=219.2
Q ss_pred cEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 35 ~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++..... .......
T Consensus 7 ~i~~~~~~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~ 85 (714)
T TIGR02437 7 TIQVTALEDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFA-LPDAELI 85 (714)
T ss_pred eEEEEEccCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhccc-CCHHHHH
Confidence 567774 78999999999999999999999999999999999999999999999999999999999864211 1222333
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
.+++..++++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.. +++
T Consensus 86 ~~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~ 165 (714)
T TIGR02437 86 QWLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALE 165 (714)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence 4555567788899999999999999999999999999999999999999999999999999999999999999988 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHH-HhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCC
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT 271 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~-~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 271 (350)
|++||++++|+||+++||||+++|++++.+.+..+. ++....+.. . ... .+...... ...+.+++.
T Consensus 166 llltG~~~~A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~~~-~------~~~-~~~~~~~~--~~~~~~~~~--- 232 (714)
T TIGR02437 166 WIASGKENRAEDALKVGAVDAVVTADKLGAAALQLLKDAINGKLDW-K------AKR-QPKLEPLK--LSKIEAMMS--- 232 (714)
T ss_pred HHHcCCcCCHHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCCcc-c------ccC-CCCccccc--ccchHHHHH---
Confidence 999999999999999999999999888776554443 222111000 0 000 00000000 000111110
Q ss_pred HHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCcccc
Q 018834 272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLF 348 (350)
Q Consensus 272 ~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~~~~ 348 (350)
.+ .+.+...++..++.|...+. +++++++.. .+++++|+.|.+.|.+++.+|+++.|+
T Consensus 233 ----~~-----------~~~~~~~~~~~~~~pap~~~-~~~v~~~~~---~~~~~gl~~E~~~f~~l~~s~~a~~l~ 290 (714)
T TIGR02437 233 ----FT-----------TAKGMVAQVAGPHYPAPMTA-VKTIEKAAR---FGRDKALEIEAKGFVKLAKTSEAKALI 290 (714)
T ss_pred ----HH-----------HHHHHHHHhhcCCCCCHHHH-HHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 00 11112334456677877666 899999999 899999999999999999999998874
No 77
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=100.00 E-value=2.1e-43 Score=366.66 Aligned_cols=290 Identities=19% Similarity=0.251 Sum_probs=214.1
Q ss_pred CcEEEEEeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEE-EEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834 34 NQVLVEGKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFV-SMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~v-vl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
+.+.++++++|++||||||+ +.|+||.+|+.+|.++++.++.|++|++| |++|.|++||+|+|++++... ...+.
T Consensus 13 ~~~~~~~~~gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~---~~~~~ 89 (737)
T TIGR02441 13 THRHYEVKGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAAC---KTAQE 89 (737)
T ss_pred CeEEEEEECCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhcc---CChHH
Confidence 45889999999999999998 68999999999999999999999999965 679999999999999998531 22233
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEecccccccccCCCchHHHHhhccHHH
Q 018834 112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL 189 (350)
Q Consensus 112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~ 189 (350)
...+.....+++.+|.++||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|+|++|..
T Consensus 90 ~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~ 169 (737)
T TIGR02441 90 VTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVP 169 (737)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHH
Confidence 4455566678889999999999999999999999999999999999987 58999999999999999999999999987
Q ss_pred -HHHHhhcCCCCCHHHHHHCCCCccccCC--CCh---H-HHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHH
Q 018834 190 -GEFLALTGAKLNGAEMMACGLATHYSVS--EKL---P-LIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI 262 (350)
Q Consensus 190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~--~~l---~-~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 262 (350)
+++|++||++++|++|+++||||+++|+ +++ + ++.+.+...+......+...+...+........ ..
T Consensus 170 ~A~~l~ltG~~i~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~~-~~----- 243 (737)
T TIGR02441 170 AALDMMLTGKKIRADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVHK-IT----- 243 (737)
T ss_pred HHHHHHHcCCcCCHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccCc-cc-----
Confidence 9999999999999999999999999986 222 1 112222211111111111101000000000000 00
Q ss_pred HHHhcCc-CCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhc
Q 018834 263 VDKCFGL-DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRR 341 (350)
Q Consensus 263 i~~~f~~-~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~ 341 (350)
...... .....+++.. .+...++.+.+.|...++ +++++.+.. .+++++|+.|.+.|.+++.+
T Consensus 244 -~~~~~~~~~~~~~~~~~-----------~~~~~~~~~g~~~Ap~~~-l~~v~~~~~---~~~~~gl~~E~~~f~~l~~s 307 (737)
T TIGR02441 244 -QYVMTNPFVRQQVYKTA-----------EDKVMKQTKGLYPAPLKI-LDVVRTGYD---QGPDAGYEAESKAFGELSMT 307 (737)
T ss_pred -hhhcccchhHHHHHHHH-----------HHHHHHhccCCCccHHHH-HHHHHHHhc---CCHHHHHHHHHHHHHHHhCC
Confidence 000000 0011111111 112233334447877776 999999998 89999999999999999999
Q ss_pred cCCcccc
Q 018834 342 HGGSLLF 348 (350)
Q Consensus 342 ~~~~~~~ 348 (350)
|+++.|+
T Consensus 308 ~~a~al~ 314 (737)
T TIGR02441 308 FESKALI 314 (737)
T ss_pred HHHHHHH
Confidence 9999875
No 78
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=3.6e-43 Score=352.16 Aligned_cols=252 Identities=13% Similarity=0.059 Sum_probs=207.9
Q ss_pred CCcEEE--EEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHHc-CCCceEEEEEcCC-CccccCC
Q 018834 33 CNQVLV--EGKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSG-RAFCAGG 95 (350)
Q Consensus 33 ~~~v~~--~~~~~v~~ItLnrp~~~-------------Nal~~~m~~~L~~~l~~~~~-d~~v~~vvl~g~g-~~F~aG~ 95 (350)
+.++.+ +++++|++||||||+++ |+||.+|+.+|.+++++++. |++||+|||||.| ++||+|+
T Consensus 259 ~~~~~v~~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~ 338 (550)
T PRK08184 259 YRHVDVEIDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAA 338 (550)
T ss_pred eEEEEEEEEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCC
Confidence 334444 44689999999999988 68999999999999999986 7999999999999 5999999
Q ss_pred ChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEC-Ccccccc-cccccccCEEEEe-------CCeeEecc
Q 018834 96 DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN-GVTMGGG-AGVSIPGTFRVAC-------GKTVFATP 166 (350)
Q Consensus 96 Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~-G~~~GgG-~~Lal~~D~riat-------e~a~f~~P 166 (350)
|++... . .+.......+.....++.+|..+||||||+|| |+|+||| ++|+++||+|||+ ++++|++|
T Consensus 339 Dl~~~~-~---~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~p 414 (550)
T PRK08184 339 DATLLA-H---KDHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLS 414 (550)
T ss_pred Chhhhc-c---cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECc
Confidence 987321 1 11111122334445577889999999999997 9999999 9999999999999 99999999
Q ss_pred cccccccCCCchHHHHhhc-cHHH-HHHH--hhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHH
Q 018834 167 ETLIGFHPDAGASFYLSHL-PGHL-GEFL--ALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEAC 241 (350)
Q Consensus 167 e~~iGl~P~~G~s~~L~rl-~g~~-a~~l--~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~ 241 (350)
|+++|++|++|++++|+|+ +|.. ++++ ++||++++|+||+++|||++++|++++.+.. +.+.+++..+|.+++.+
T Consensus 415 e~~~Gl~p~~gg~~~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~~~ 494 (550)
T PRK08184 415 ALNFGLYPMVNGLSRLARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWEDEVRIALEERASLSPDALTGM 494 (550)
T ss_pred cccccCCCCCCcHHHhHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 9999999999999999987 6987 8876 5999999999999999999999999887644 44578999999999999
Q ss_pred HHHHhccCCCCcchH-H-HHHHHHHHhcC-cCCHH---HHHHHHhccCCCCCc
Q 018834 242 LEKYSDLVYPDKNSV-I-HRIDIVDKCFG-LDTVE---EIIDSLESEASLIND 288 (350)
Q Consensus 242 ~~~~~~~~~~~~~~~-~-~~~~~i~~~f~-~~~~~---ei~~~lek~~~~~~~ 288 (350)
|+.++.......+.. . .+.+++..+|. .+..+ ++-+|++|++|+|..
T Consensus 495 K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~ekr~~~f~~ 547 (550)
T PRK08184 495 EANLRFAGPETMETRIFGRLTAWQNWIFQRPNAVGEKGALKVYGTGQKAQFDW 547 (550)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhcCCcccccchHHHHhccCCCCCCCC
Confidence 999987655443333 3 34677888895 55666 699999999988753
No 79
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.4e-42 Score=325.38 Aligned_cols=203 Identities=20% Similarity=0.330 Sum_probs=175.0
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHHHHHHHHHHHH
Q 018834 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSF 122 (350)
Q Consensus 44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l 122 (350)
+++||||||+++|++|.+|+.+|.++++.++.|++|++|||||.| ++||+|+|++++..... +.......+....+++
T Consensus 38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~-~~~~~~~~~~~~~~~l 116 (360)
T TIGR03200 38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYA-GNPQEYRQYMRLFNDM 116 (360)
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcc-cChhHHHHHHHHHHHH
Confidence 466999999999999999999999999999999999999999999 79999999998765321 1223334455556678
Q ss_pred HHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhcCCCCC
Q 018834 123 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN 201 (350)
Q Consensus 123 ~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ltG~~l~ 201 (350)
+..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||++++
T Consensus 117 ~~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~s 196 (360)
T TIGR03200 117 VSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWS 196 (360)
T ss_pred HHHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCc
Confidence 8889999999999999999999999999999999999999999999999999999999999999988 999999999999
Q ss_pred HHHHHHCCCCccccCCCCh------------HHHHHHHHHhc-cCCH--HHHHHHHHHHhc
Q 018834 202 GAEMMACGLATHYSVSEKL------------PLIEEELGKLV-TDDP--SVIEACLEKYSD 247 (350)
Q Consensus 202 a~eA~~~GLv~~vv~~~~l------------~~~~~~l~~l~-~~~~--~~i~~~~~~~~~ 247 (350)
|+||+++|||++++|+.++ ++..+.+.++. ..+. .++...|+.+..
T Consensus 197 A~EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 257 (360)
T TIGR03200 197 AHKAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQ 257 (360)
T ss_pred HHHHHHcCChheecCchhcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhc
Confidence 9999999999999999887 55555554433 3333 366777776664
No 80
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-42 Score=316.02 Aligned_cols=206 Identities=17% Similarity=0.119 Sum_probs=182.9
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 113 (350)
+.|.++.+++|++||||||+ .|++|.+|+.+|.++++.++ +++++|||+|.|+.||+|+|++++... .+...
T Consensus 3 ~~i~~~~~~~v~~itln~~~-~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~-----~~~~~ 74 (229)
T PRK06213 3 ELVSYTLEDGVATITLDDGK-VNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSG-----AQAAI 74 (229)
T ss_pred ceEEEEecCCEEEEEeCCCC-CCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcc-----hHhHH
Confidence 46889999999999999985 69999999999999999988 457999999999999999999987531 22334
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-GE 191 (350)
Q Consensus 114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~ 191 (350)
.++...++++.++.++|||+||++||+|+|||++|+++|||||++++ ++|++||+++|++|+.|+.+++++.+|.. ++
T Consensus 75 ~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a~ 154 (229)
T PRK06213 75 ALLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAFQ 154 (229)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHHH
Confidence 55666778888999999999999999999999999999999999999 99999999999998888888888888887 89
Q ss_pred HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhc
Q 018834 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSD 247 (350)
Q Consensus 192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~ 247 (350)
+|++||++++|+||+++||||+++|++++.+.... .++++..++.++...|+.++.
T Consensus 155 ~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~ 211 (229)
T PRK06213 155 RAVINAEMFDPEEAVAAGFLDEVVPPEQLLARAQAAARELAGLNMGAHAATKLKVRA 211 (229)
T ss_pred HHHHcCcccCHHHHHHCCCceeccChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999998887765444 467888999999999988765
No 81
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=9.2e-43 Score=299.04 Aligned_cols=248 Identities=21% Similarity=0.310 Sum_probs=212.4
Q ss_pred CCcEEEEE----eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcC
Q 018834 33 CNQVLVEG----KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 107 (350)
Q Consensus 33 ~~~v~~~~----~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~ 107 (350)
.++|.+++ +.|+.+|-+|||.+.|+|+.-|+.+|.++|+++..|+.+|+|+|++.- ..||+|.|+++-..+
T Consensus 26 ~~Ev~v~~L~g~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~M---- 101 (291)
T KOG1679|consen 26 ANEVFVRRLTGKDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTM---- 101 (291)
T ss_pred CceeeeeeccCCCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcC----
Confidence 55676664 457999999999999999999999999999999999999999999975 899999999997654
Q ss_pred ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH
Q 018834 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187 (350)
Q Consensus 108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g 187 (350)
.+.+...|.+.+..++..|++.|.|+||+|+|.++|||++|+++||+|+|.++++|+++|++++++|+.|+|++|+|++|
T Consensus 102 s~~Ev~~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg 181 (291)
T KOG1679|consen 102 SPSEVTRFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVG 181 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHh
Confidence 56778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-HHHHhhcCCCCCHHHHHHCCCCccccCCCCh-HHHHH----HHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHH
Q 018834 188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKL-PLIEE----ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 261 (350)
Q Consensus 188 ~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l-~~~~~----~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 261 (350)
.. +++|++||+.+++.||..+|||+|+|...+- ++..+ -..++....|-+++.+|..++..+..+....+.
T Consensus 182 ~alaKELIftarvl~g~eA~~lGlVnhvv~qneegdaa~~kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~--- 258 (291)
T KOG1679|consen 182 VALAKELIFTARVLNGAEAAKLGLVNHVVEQNEEGDAAYQKALELAREILPQGPIAVRLAKLAINLGMEVDIASGLS--- 258 (291)
T ss_pred HHHHHhHhhhheeccchhHHhcchHHHHHhcCccccHHHHHHHHHHHHhccCCchhhhHHHHHhccCceeccccccc---
Confidence 98 9999999999999999999999999987532 22222 225777889999999999998776544332222
Q ss_pred HHHHhc-----CcCCHHHHHHHHhccCCCCC
Q 018834 262 IVDKCF-----GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 262 ~i~~~f-----~~~~~~ei~~~lek~~~~~~ 287 (350)
.-+.|| ..|..+++.+|-+|++|.+.
T Consensus 259 iEe~CYaq~i~t~drLeglaaf~ekr~p~y~ 289 (291)
T KOG1679|consen 259 IEEMCYAQIIPTKDRLEGLAAFKEKRKPEYK 289 (291)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHhhcCCCcC
Confidence 112333 46788888888899888654
No 82
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=100.00 E-value=4.6e-42 Score=355.75 Aligned_cols=271 Identities=21% Similarity=0.260 Sum_probs=209.4
Q ss_pred EEEeCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEE-EcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834 38 VEGKANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSM-KGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (350)
Q Consensus 38 ~~~~~~v~~ItLnrp-~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl-~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 115 (350)
.+.+++|++|||||| ++.|+||.+|+.+|.++|+.++.|++|++||| +|.|++||+|+|++++... ........+
T Consensus 5 ~~~~~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~---~~~~~~~~~ 81 (699)
T TIGR02440 5 TVREDGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAAC---QTAGEAKAL 81 (699)
T ss_pred EEcCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhcc---CChhHHHHH
Confidence 345689999999999 68999999999999999999999999999986 5788999999999987532 112233344
Q ss_pred HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEF 192 (350)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~ 192 (350)
+...+.++..|.++||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|+|++|.. +++
T Consensus 82 ~~~~~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~ 161 (699)
T TIGR02440 82 AQQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALD 161 (699)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHH
Confidence 555667888899999999999999999999999999999999986 79999999999999999999999999998 999
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcC--cC
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG--LD 270 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~--~~ 270 (350)
|++||+.++|++|+++||||+++|++++.+.+..+++...... .+. ... .+... ..
T Consensus 162 llltG~~~~a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~--------------~~~--~~~------~~~~~~~~~ 219 (699)
T TIGR02440 162 MILTGKQLRAKQALKLGLVDDVVPQSILLDTAVEMALKGKPIR--------------KPL--SLQ------ERLLEGTPL 219 (699)
T ss_pred HHHcCCcCCHHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCC--------------CCc--cch------hhhcccCch
Confidence 9999999999999999999999998887665544432100000 000 000 00000 00
Q ss_pred CHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCcccc
Q 018834 271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLF 348 (350)
Q Consensus 271 ~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~~~~ 348 (350)
....+.+... +...++...+.| +...++++++.+.. .+++++++.|.+.+..++.+||.+.++
T Consensus 220 a~~~~~~~~~-----------k~~~~~~~~~~~-a~~~~~~~i~~~~~---~~~~~~l~~E~~~~~~~~~s~~~~~~~ 282 (699)
T TIGR02440 220 GRALLFDQAA-----------KKTAKKTQGNYP-AAERILDVVRQGLA---QGMQKGLDAEARAFGELVMTPESAALR 282 (699)
T ss_pred hHHHHHHHHH-----------HHHHHhcccCCh-hHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 1111111111 112223334555 55666999999999 899999999999999999999987653
No 83
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=1.9e-41 Score=351.93 Aligned_cols=274 Identities=20% Similarity=0.265 Sum_probs=210.5
Q ss_pred CcEEEEE-eCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChH
Q 018834 34 NQVLVEG-KANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE 110 (350)
Q Consensus 34 ~~v~~~~-~~~v~~ItLnrp-~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~ 110 (350)
..+.++. +++|++|||||| +++|+||.+|+.+|.++++.++.|+++++|||+|.+ +.||+|+|++++... ...+
T Consensus 5 ~~~~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~---~~~~ 81 (708)
T PRK11154 5 SAFTLNVREDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAAC---KTAQ 81 (708)
T ss_pred ceEEEEEcCCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhcc---CCHH
Confidence 4567777 689999999999 689999999999999999999999999999999975 899999999987532 1122
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEecccccccccCCCchHHHHhhccHH
Q 018834 111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGH 188 (350)
Q Consensus 111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~iGl~P~~G~s~~L~rl~g~ 188 (350)
....+.+....++.+|.++||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|+|++|.
T Consensus 82 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~ 161 (708)
T PRK11154 82 EAEALARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGV 161 (708)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCH
Confidence 23334455566888999999999999999999999999999999999986 5999999999999999999999999998
Q ss_pred H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc
Q 018834 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF 267 (350)
Q Consensus 189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f 267 (350)
. +++|++||++++|+||+++||||+++|++++.+.+..+++........+ + ... ...
T Consensus 162 ~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~~------------~-~~~---------~~~ 219 (708)
T PRK11154 162 STALDMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRPL------------P-VRE---------RLL 219 (708)
T ss_pred HHHHHHHHhCCcCCHHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCcC------------C-chh---------hhc
Confidence 8 9999999999999999999999999998887654444432110000000 0 000 000
Q ss_pred Cc--CCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 268 GL--DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 268 ~~--~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+. .....+.+...+ ...++...+. .++..++++++++.. .+++++++.|.+.+..++.++|.+
T Consensus 220 ~~~p~~~~~~~~~~~~-----------~~~~~~~g~~-~A~~~~k~~i~~~~~---~~~~~~l~~E~~~~~~~~~s~~~~ 284 (708)
T PRK11154 220 EGNPLGRALLFKQARK-----------KTLAKTQGNY-PAPERILDVVRTGLE---KGMSSGYEAEARAFGELAMTPESA 284 (708)
T ss_pred ccCchhHHHHHHHHHH-----------HHHHhcccCC-hHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHHH
Confidence 00 000111111110 1111222233 488888999999998 899999999999999999999877
Q ss_pred cc
Q 018834 346 LL 347 (350)
Q Consensus 346 ~~ 347 (350)
.+
T Consensus 285 ~~ 286 (708)
T PRK11154 285 AL 286 (708)
T ss_pred HH
Confidence 54
No 84
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=100.00 E-value=3e-41 Score=308.10 Aligned_cols=207 Identities=17% Similarity=0.175 Sum_probs=169.3
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCce-EEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG-FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114 (350)
Q Consensus 36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~-~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 114 (350)
+.++.+++|++|+||||++ |+||.+|+.+|.++++.++.|++++ +||++|.|+.||+|+|++++... .........
T Consensus 2 ~~~~~~~~v~~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~--~~~~~~~~~ 78 (239)
T PLN02267 2 CTLEKRGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAA--GSAPSRLHL 78 (239)
T ss_pred ceeEecCCEEEEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhcc--ccCHHHHHH
Confidence 5678889999999999985 9999999999999999999998875 77889999999999999986421 111222233
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEe-CCeeEeccccccccc-CCCchHHHHhhccHHH-H-
Q 018834 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFH-PDAGASFYLSHLPGHL-G- 190 (350)
Q Consensus 115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riat-e~a~f~~Pe~~iGl~-P~~G~s~~L~rl~g~~-a- 190 (350)
+.+..++++..|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|+. |++ ++++|++++|.. +
T Consensus 79 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~-~~~~l~~~vG~~~a~ 157 (239)
T PLN02267 79 MVAKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDY-FMALLRAKIGSPAAR 157 (239)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChH-HHHHHHHHcChHHHH
Confidence 44556678888999999999999999999999999999999998 568999999999997 555 578899988876 7
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCC-CChHHHHHHH-HHhccC--CHHHHHHHHHHHh
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEEL-GKLVTD--DPSVIEACLEKYS 246 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~-~~l~~~~~~l-~~l~~~--~~~~i~~~~~~~~ 246 (350)
++|++||++++|+||+++||||+++|+ +++.+...++ ++++.. ++......|+.++
T Consensus 158 ~~llltG~~~~a~eA~~~Glv~~vv~~~~~l~~~a~~~A~~ia~~~~~~~~~~~~k~~~~ 217 (239)
T PLN02267 158 RDVLLRAAKLTAEEAVEMGIVDSAHDSAEETVEAAVRLGEELAARKWNGEVYASIRKSLL 217 (239)
T ss_pred HHHHHcCCcCCHHHHHHCCCcceecCCHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHH
Confidence 699999999999999999999999985 5665544444 556655 3455666666554
No 85
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=3.7e-41 Score=291.61 Aligned_cols=244 Identities=20% Similarity=0.295 Sum_probs=200.5
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhh---hcCC-----hHHH
Q 018834 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFM---NQGK-----LEEC 112 (350)
Q Consensus 41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~---~~~~-----~~~~ 112 (350)
+..|..+.||||.|+|+||..|+.|+.++|+.+..||++++|||.|+|+.||+|.|+..+.... .+++ ....
T Consensus 29 ~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~~dd~aR~g~~l 108 (292)
T KOG1681|consen 29 QPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQPEGDDVARKGRSL 108 (292)
T ss_pred CCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccccccchHhhhhHHH
Confidence 4568999999999999999999999999999999999999999999999999999987654321 1111 2345
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH--H
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL--G 190 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~--a 190 (350)
.++...+++.+..|++||||||++|||+|+|||+.|..+||+|+|++++.|..-|+.+|+..|+|.-.+||+.+|.. +
T Consensus 109 rr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~~ 188 (292)
T KOG1681|consen 109 RRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSLA 188 (292)
T ss_pred HHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHHH
Confidence 66777788899999999999999999999999999999999999999999999999999999999999999999954 9
Q ss_pred HHHhhcCCCCCHHHHHHCCCCccccCCCC-hH-HHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHH--HHHHh
Q 018834 191 EFLALTGAKLNGAEMMACGLATHYSVSEK-LP-LIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID--IVDKC 266 (350)
Q Consensus 191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~-l~-~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~i~~~ 266 (350)
+++++|++.+.|.||++.|||.+|+|+.+ +. ....-.+.++.++|.++..+|+.+........+..+.+.. -...+
T Consensus 189 ~elafTar~f~a~EAl~~GLvSrvf~dk~~ll~~~l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L 268 (292)
T KOG1681|consen 189 RELAFTARKFSADEALDSGLVSRVFPDKEELLNGALPMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSML 268 (292)
T ss_pred HHHHhhhhhcchhhhhhcCcchhhcCCHHHHHhhhHHHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999743 33 3444446788899999999998887654333222333211 12344
Q ss_pred cCcCCHHHHHHHHhccCC
Q 018834 267 FGLDTVEEIIDSLESEAS 284 (350)
Q Consensus 267 f~~~~~~ei~~~lek~~~ 284 (350)
++.|-++..++.++|.++
T Consensus 269 ~s~Dl~~av~a~m~k~k~ 286 (292)
T KOG1681|consen 269 LSDDLVKAVMAQMEKLKT 286 (292)
T ss_pred HHHHHHHHHHHHhhcCCC
Confidence 466777777777776543
No 86
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=100.00 E-value=3e-40 Score=292.42 Aligned_cols=190 Identities=33% Similarity=0.532 Sum_probs=173.1
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (350)
Q Consensus 36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 115 (350)
+.+++++++++|+||+|++.|++|.+|+++|.++++.++.|+++++|||+|.|+.||+|+|++++....... +....+
T Consensus 1 i~~~~~~~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~~--~~~~~~ 78 (195)
T cd06558 1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAG--EEARAF 78 (195)
T ss_pred CEEEEECCEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcccccc--hhHHHH
Confidence 467888999999999999999999999999999999999999999999999999999999999987542111 135677
Q ss_pred HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA 194 (350)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ 194 (350)
++..+.+...+..+|||+||++||+|+|||++++++||+||++++++|++||+++|++|++|++++|++++|.. +.+++
T Consensus 79 ~~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~ 158 (195)
T cd06558 79 IRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELL 158 (195)
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999877 99999
Q ss_pred hcCCCCCHHHHHHCCCCccccCCCChHHHHHHH
Q 018834 195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 227 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l 227 (350)
++|+.++|+||+++||++++++.+++.+....+
T Consensus 159 l~g~~~~a~ea~~~Glv~~~~~~~~l~~~a~~~ 191 (195)
T cd06558 159 LTGRRISAEEALELGLVDEVVPDEELLAAALEL 191 (195)
T ss_pred HcCCccCHHHHHHcCCCCeecChhHHHHHHHHH
Confidence 999999999999999999999987766544443
No 87
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=1.1e-38 Score=318.71 Aligned_cols=202 Identities=14% Similarity=0.168 Sum_probs=166.9
Q ss_pred CCCcEEEEEeCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHH-cCCCceEEEEEcC-CCccccCCChhh
Q 018834 32 LCNQVLVEGKANSRMAILNRPS----------ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGS-GRAFCAGGDIVS 99 (350)
Q Consensus 32 ~~~~v~~~~~~~v~~ItLnrp~----------~~Nal~~~m~~~L~~~l~~~~-~d~~v~~vvl~g~-g~~F~aG~Dl~~ 99 (350)
.++++.++++++|++||||||+ +.|++|.+|+.+|.++|+.++ .|+++|+|||||. |++||+|+|+++
T Consensus 9 ~~~~v~~~~~g~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL~~ 88 (546)
T TIGR03222 9 QYRHWKLTFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANIFM 88 (546)
T ss_pred CCceEEEEeeCCEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCHHH
Confidence 3567999999999999999976 899999999999999999999 7899999999997 599999999998
Q ss_pred HHHhhhcCChHHHHHHHH-HHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEeccccc-ccccCC
Q 018834 100 LYHFMNQGKLEECKDFFR-TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHPD 175 (350)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~-~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~-iGl~P~ 175 (350)
+...... .......+.. ....+...+.++||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|+
T Consensus 89 ~~~~~~~-~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~ 167 (546)
T TIGR03222 89 LGLSTHA-WKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPG 167 (546)
T ss_pred Hhccccc-hhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCc
Confidence 7532110 0111111111 1123445677899999999999999999999999999999986 799999997 999999
Q ss_pred CchHHHHh--hccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCC
Q 018834 176 AGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDD 234 (350)
Q Consensus 176 ~G~s~~L~--rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~ 234 (350)
+|++++++ +.+|.. +++|++||++++|+||+++||||++||++++.+....+ .+++..+
T Consensus 168 ~gg~~~l~~~~~vg~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~ 230 (546)
T TIGR03222 168 TGGLTRVTDKRRVRRDHADIFCTIEEGVRGKRAKEWRLVDEVVKPSQFDAAIAERAAELAAQS 230 (546)
T ss_pred cchhhhccccchhCHHHHHHHHHcCCCccHHHHHHcCCceEEeChHHHHHHHHHHHHHHHhCC
Confidence 99999897 577877 99999999999999999999999999998887654444 4555433
No 88
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=100.00 E-value=8.1e-39 Score=275.19 Aligned_cols=250 Identities=17% Similarity=0.241 Sum_probs=203.7
Q ss_pred CCCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcC--C-CccccCCChhhHHHh--hh
Q 018834 32 LCNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--G-RAFCAGGDIVSLYHF--MN 105 (350)
Q Consensus 32 ~~~~v~~~~~-~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~--g-~~F~aG~Dl~~~~~~--~~ 105 (350)
.++.|++++. ++++.||+|||+++||+.+..+.|+.++|..++.|++|.+|+|||+ | ++||+|+|-+--... +.
T Consensus 16 ~y~dI~Y~~~~~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~ 95 (282)
T COG0447 16 GYEDITYEKSVDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYV 95 (282)
T ss_pred CcceeEEeeccCceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCcc
Confidence 3667999988 9999999999999999999999999999999999999999999986 5 899999997643221 11
Q ss_pred cCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhc
Q 018834 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 185 (350)
Q Consensus 106 ~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl 185 (350)
.++. ..++ ...++-+.|..+||||||.++|+++|||-.|-+.||+.||+++++|+..-.++|-|-++.++-+|+|+
T Consensus 96 ~d~~--~~rL--nvLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~ 171 (282)
T COG0447 96 DDDG--IPRL--NVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARI 171 (282)
T ss_pred CCcc--Cccc--chhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHH
Confidence 1111 1111 12244556889999999999999999999999999999999999999999999999888888889999
Q ss_pred cHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHH--HH
Q 018834 186 PGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR--ID 261 (350)
Q Consensus 186 ~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~ 261 (350)
+|.. |+++.+.++.++|+||+++|+||.|||.++|++ ..++..++...+|.+++..|..++...... ..+.+. ..
T Consensus 172 VGqKkArEIwfLcR~Y~A~eal~MGlVN~Vvp~~~LE~e~v~W~~E~l~kSP~AlR~LK~Afnad~DGl-aG~q~~ag~a 250 (282)
T COG0447 172 VGQKKAREIWFLCRQYDAEEALDMGLVNTVVPHADLEKETVQWAREMLAKSPTALRMLKAAFNADCDGL-AGLQELAGNA 250 (282)
T ss_pred hhhhhhHHhhhhhhhccHHHHHhcCceeeeccHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCchh-hHHHHhcccc
Confidence 9998 999999999999999999999999999999985 677778999999999999999998643211 111110 11
Q ss_pred HHHHhcCcCCHHHHHHHHhccCCCC
Q 018834 262 IVDKCFGLDTVEEIIDSLESEASLI 286 (350)
Q Consensus 262 ~i~~~f~~~~~~ei~~~lek~~~~~ 286 (350)
..-.+...+..|+--+|+||+.|.|
T Consensus 251 t~L~YmTdEa~EGr~AF~eKR~Pdf 275 (282)
T COG0447 251 TLLYYMTDEAQEGRDAFLEKRKPDF 275 (282)
T ss_pred eEEEEechhhhhhHHHHhhccCCCh
Confidence 1111225677888889999998765
No 89
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=1.5e-37 Score=311.71 Aligned_cols=203 Identities=14% Similarity=0.171 Sum_probs=166.3
Q ss_pred CCCCcEEEEEeCCEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHHH-cCCCceEEEEEcCC-CccccCCChh
Q 018834 31 DLCNQVLVEGKANSRMAILNRP-------S---ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGSG-RAFCAGGDIV 98 (350)
Q Consensus 31 ~~~~~v~~~~~~~v~~ItLnrp-------~---~~Nal~~~m~~~L~~~l~~~~-~d~~v~~vvl~g~g-~~F~aG~Dl~ 98 (350)
..++++.++.+++|++|||||| + ++|++|.+|+.+|.+++++++ .|++|++|||+|.+ ++||+|+|++
T Consensus 12 ~~~~~~~~e~~~~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~ 91 (550)
T PRK08184 12 SQYRHWKLSFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIF 91 (550)
T ss_pred CCCceEEEEeeCCEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHH
Confidence 4466799999999999999965 4 899999999999999999999 78999999999985 9999999999
Q ss_pred hHHHhhhcCChHHHHHHHHHH-HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEeccccc-ccccC
Q 018834 99 SLYHFMNQGKLEECKDFFRTL-YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHP 174 (350)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~-iGl~P 174 (350)
++...... .......+.+.. ..+...+..+||||||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|
T Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P 170 (550)
T PRK08184 92 MLGGSSHA-WKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLP 170 (550)
T ss_pred hHhccccc-hhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCC
Confidence 87532100 001111111111 12345677899999999999999999999999999999987 899999997 99999
Q ss_pred CCchHHHHh--hccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCC
Q 018834 175 DAGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDD 234 (350)
Q Consensus 175 ~~G~s~~L~--rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~ 234 (350)
++|++++|+ +++|.. +.+|++||++++|+||+++||||+++|++++.+... .+.+++..+
T Consensus 171 ~~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA~~~GLVd~vv~~d~l~~~a~~~A~~ia~~~ 234 (550)
T PRK08184 171 GTGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRAVDWRLVDEVVKPSKFDAKVAERAAELAAAS 234 (550)
T ss_pred CcchHHHhhhhhhcCHHHHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCC
Confidence 999999998 678887 999999999999999999999999999988765443 334555443
No 90
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=274.31 Aligned_cols=249 Identities=20% Similarity=0.295 Sum_probs=209.2
Q ss_pred CCcEEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834 33 CNQVLVEGKANSRMAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111 (350)
Q Consensus 33 ~~~v~~~~~~~v~~ItLn-rp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 111 (350)
+..+.+++++++.+|.+| ||++.|+|+.+|..++.++|+.+..|+++..++++|.|++||+|.|++.+......+..+.
T Consensus 6 ~~~~vv~~~~g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~ 85 (266)
T KOG0016|consen 6 YREIVVTRENGPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEE 85 (266)
T ss_pred ccceEEEecCCcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCccccc
Confidence 456899999999999999 9999999999999999999999999999999999999999999999999876643333222
Q ss_pred H---HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834 112 C---KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188 (350)
Q Consensus 112 ~---~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~ 188 (350)
. .++...+......+.++|||+||.+||+++|-|+.+...||+++|+++++|..|++++|..|++|++|.+|+++|.
T Consensus 86 ~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~ 165 (266)
T KOG0016|consen 86 SDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGS 165 (266)
T ss_pred chhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhch
Confidence 2 2223333446777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHH
Q 018834 189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDK 265 (350)
Q Consensus 189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~ 265 (350)
. |.+|+|-|++++|+||.+.|||+++++.+.+.+ +...+++.+..+|..++..|+.++........ ....+...+..
T Consensus 166 ~~A~E~ll~~~kltA~Ea~~~glVskif~~~tf~~~v~~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~ 245 (266)
T KOG0016|consen 166 ASANEMLLFGEKLTAQEACEKGLVSKIFPAETFNEEVLKKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLK 245 (266)
T ss_pred hhHHHHHHhCCcccHHHHHhcCchhhhcChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 8 999999999999999999999999999999875 67788889999999999999988875432211 12223555666
Q ss_pred hc-CcCCHHHHHHHHhc
Q 018834 266 CF-GLDTVEEIIDSLES 281 (350)
Q Consensus 266 ~f-~~~~~~ei~~~lek 281 (350)
.| +.+..+.+.+++.+
T Consensus 246 ~W~s~e~~~~~~~~~~~ 262 (266)
T KOG0016|consen 246 QWVSAECLARFKQYLSK 262 (266)
T ss_pred hccChHHHHHHHHHhcc
Confidence 66 45555555555543
No 91
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=5.9e-37 Score=261.32 Aligned_cols=254 Identities=20% Similarity=0.241 Sum_probs=210.2
Q ss_pred cCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCCh
Q 018834 30 DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL 109 (350)
Q Consensus 30 ~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~ 109 (350)
.++....+++.+++|..|+||+|+|+|.|+.+|+.+|.+.+....++.++|+|||+..|+.||+|.|++++.+. .+.
T Consensus 28 ~~p~~~g~~~~~~gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e---~g~ 104 (287)
T KOG1682|consen 28 NGPSDLGLVKEHNGVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNE---PGS 104 (287)
T ss_pred cCcccccccccccceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcC---ccc
Confidence 34445667788899999999999999999999999999999998888899999999999999999999999753 344
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189 (350)
Q Consensus 110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~ 189 (350)
+.....|....+++..|.+.|.|||+-+||++...|+.|...||+++|+++++|..|-..+|+|...-+.. |.|.+...
T Consensus 105 d~haevFqtc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGvA-laRavpRk 183 (287)
T KOG1682|consen 105 DIHAEVFQTCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGVA-LARAVPRK 183 (287)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcchh-Hhhhcchh
Confidence 55677889999999999999999999999999999999999999999999999999999999986654443 66766655
Q ss_pred -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHh
Q 018834 190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKC 266 (350)
Q Consensus 190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~ 266 (350)
++||++||.+|+++||+..||++++||+++++...+.+ ..+-..+...+...|+.|.......... .....+.+-.-
T Consensus 184 va~~ML~Tg~Pi~~eeAl~sGlvskvVp~~el~~e~~~i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n 263 (287)
T KOG1682|consen 184 VAAYMLMTGLPITGEEALISGLVSKVVPAEELDKEIEEITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCEN 263 (287)
T ss_pred HHHHHHHhCCCCchHHHHHhhhhhhcCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999998655544 4555667777888888877654322111 11123344444
Q ss_pred c-CcCCHHHHHHHHhccCCCCC
Q 018834 267 F-GLDTVEEIIDSLESEASLIN 287 (350)
Q Consensus 267 f-~~~~~~ei~~~lek~~~~~~ 287 (350)
| -.|..|+|.+|++|+.|+|.
T Consensus 264 ~ql~d~kegiasf~~krp~~~~ 285 (287)
T KOG1682|consen 264 FQLGDTKEGIASFFEKRPPNWK 285 (287)
T ss_pred ccccchHHHHHHHhccCCCCcC
Confidence 5 37889999999999987664
No 92
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.78 E-value=4.6e-19 Score=154.76 Aligned_cols=140 Identities=16% Similarity=0.110 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Q 018834 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (350)
Q Consensus 61 ~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~ 140 (350)
-.+.+|.++++.++.|++|++|||++ +|.|+|+.... ..++++..+..++|||||++||.
T Consensus 22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~----------------~~~~~i~~~~~~~kpVia~v~G~ 81 (177)
T cd07014 22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASE----------------VIRAELAAARAAGKPVVASGGGN 81 (177)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCc
Confidence 35689999999999999999999987 79999876431 12335566778999999999999
Q ss_pred ccccccccccccCEEEEeCCeeEecccccccccCCCchHH--------HHhhccH--HH-HHHHhhcCCCCCHHHHHHCC
Q 018834 141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF--------YLSHLPG--HL-GEFLALTGAKLNGAEMMACG 209 (350)
Q Consensus 141 ~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~--------~L~rl~g--~~-a~~l~ltG~~l~a~eA~~~G 209 (350)
|.|||+.|+++||++++++++.|+.+.+..+.-+...... .+++..| .. ..+++..|..++|++|++.|
T Consensus 82 a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~G 161 (177)
T cd07014 82 AASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANG 161 (177)
T ss_pred hhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcC
Confidence 9999999999999999999999999887766433222222 3333334 33 67788899999999999999
Q ss_pred CCccccCCCCh
Q 018834 210 LATHYSVSEKL 220 (350)
Q Consensus 210 Lv~~vv~~~~l 220 (350)
|||.+.+.+++
T Consensus 162 LVD~v~~~~e~ 172 (177)
T cd07014 162 LVDSLGSFDDA 172 (177)
T ss_pred CcccCCCHHHH
Confidence 99999986554
No 93
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.76 E-value=3.3e-18 Score=150.61 Aligned_cols=145 Identities=12% Similarity=0.074 Sum_probs=113.8
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (350)
++|.|+ ..++..+...+.+.|+.++.|+ ++.|+|. .=|.||++..-. .+..
T Consensus 2 ~vv~i~-----g~I~~~~~~~l~~~l~~a~~~~-~~~vvl~----InSpGG~v~~~~-------------------~i~~ 52 (187)
T cd07020 2 YVLEIN-----GAITPATADYLERAIDQAEEGG-ADALIIE----LDTPGGLLDSTR-------------------EIVQ 52 (187)
T ss_pred EEEEEe-----eEEChHHHHHHHHHHHHHHhCC-CCEEEEE----EECCCCCHHHHH-------------------HHHH
Confidence 456665 3366777888999999988664 7888774 235566654321 2233
Q ss_pred HHhcCCCcEEEEEC---CcccccccccccccCEEEEeCCeeEecccccccccCCC--------------chHHHHhhccH
Q 018834 125 LLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA--------------GASFYLSHLPG 187 (350)
Q Consensus 125 ~i~~~~kP~Ia~i~---G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~--------------G~s~~L~rl~g 187 (350)
.|..+|||||++++ |+|.|||+.|+++||+||++++++|+++++..|..+.. +....+++..|
T Consensus 53 ~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G 132 (187)
T cd07020 53 AILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRG 132 (187)
T ss_pred HHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 45679999999999 99999999999999999999999999999985554432 24456777777
Q ss_pred H--H-HHHHhhcCCCCCHHHHHHCCCCccccCCC
Q 018834 188 H--L-GEFLALTGAKLNGAEMMACGLATHYSVSE 218 (350)
Q Consensus 188 ~--~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~ 218 (350)
. . +..++++|+.++|+||+++||||++++++
T Consensus 133 ~~~~~a~~~l~~g~~~~a~eA~~~Glvd~v~~~~ 166 (187)
T cd07020 133 RNAEWAEKAVRESLSLTAEEALKLGVIDLIAADL 166 (187)
T ss_pred CCHHHHHHHHHcCCeecHHHHHHcCCcccccCCH
Confidence 5 3 88999999999999999999999999875
No 94
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.62 E-value=2.1e-15 Score=135.26 Aligned_cols=88 Identities=18% Similarity=0.224 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (350)
Q Consensus 57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~ 136 (350)
.-+..++.+|.++|+.+..||+|++|||+ .||+|+|+..+.+ .++.+..+..++||+||+
T Consensus 17 ~~~~~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~~----------------~~~~l~~~~~~~kpVia~ 76 (211)
T cd07019 17 TQGNVGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASEV----------------IRAELAAARAAGKPVVVS 76 (211)
T ss_pred CCCccCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHHH----------------HHHHHHHHHhCCCCEEEE
Confidence 33455789999999999999999999997 6999999976531 123445677889999999
Q ss_pred ECCcccccccccccccCEEEEeCCeeEe
Q 018834 137 LNGVTMGGGAGVSIPGTFRVACGKTVFA 164 (350)
Q Consensus 137 i~G~~~GgG~~Lal~~D~riate~a~f~ 164 (350)
++|.|.|+|+.|+++||++++++++.|+
T Consensus 77 v~g~a~s~gy~la~~aD~i~a~~~a~~g 104 (211)
T cd07019 77 AGGAAASGGYWISTPANYIVANPSTLTG 104 (211)
T ss_pred ECCeehhHHHHHHHhCCEEEEcCCCEEE
Confidence 9999999999999999999999998886
No 95
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.54 E-value=1.7e-14 Score=117.24 Aligned_cols=79 Identities=35% Similarity=0.690 Sum_probs=72.0
Q ss_pred HHHHHHHHhcCcCCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhh
Q 018834 258 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGT 337 (350)
Q Consensus 258 ~~~~~i~~~f~~~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~ 337 (350)
.....|++||+.+++++|++.|+.. +++|++++++.|+++||+|+++|+++++++++ .|++|||++|+++...
T Consensus 4 ~~~~~I~~~F~~~s~~eI~~~L~~~----~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~---~sl~e~l~~E~~~a~~ 76 (118)
T PF13766_consen 4 EHLEAIDRCFSADSVEEIIEALEAD----GDEWAQKTLETLRSGSPLSLKVTFEQLRRGRN---LSLAECLRMEYRLASR 76 (118)
T ss_dssp HCHHHHHHHTTSSSHHHHHHHHHHH----S-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTT---S-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHcc----CcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhh---CCHHHHHHHHHHHHHH
Confidence 3467899999999999999999984 78999999999999999999999999999999 9999999999999999
Q ss_pred hhhccC
Q 018834 338 SVRRHG 343 (350)
Q Consensus 338 ~~~~~~ 343 (350)
++.+||
T Consensus 77 ~~~~~D 82 (118)
T PF13766_consen 77 CMRHPD 82 (118)
T ss_dssp HHCCSC
T ss_pred Hhccch
Confidence 999886
No 96
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.52 E-value=8.7e-14 Score=119.45 Aligned_cols=134 Identities=14% Similarity=0.140 Sum_probs=102.3
Q ss_pred CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (350)
Q Consensus 58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i 137 (350)
++..++.+|.+.|+.++.|+.+++|+|.. .|.|+|+.... .+...|..++||||+.+
T Consensus 8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~~~-------------------~i~~~l~~~~kpvva~~ 64 (161)
T cd00394 8 IEDVSADQLAAQIRFAEADNSVKAIVLEV----NTPGGRVDAGM-------------------NIVDALQASRKPVIAYV 64 (161)
T ss_pred EccchHHHHHHHHHHHHhCCCCceEEEEE----ECCCcCHHHHH-------------------HHHHHHHHhCCCEEEEE
Confidence 45588999999999999999999999976 68888765421 23344667789999999
Q ss_pred CCcccccccccccccCEEEEeCCeeEecccccccccCCCchH------HHH----hhccHH---------H-HHHHhhcC
Q 018834 138 NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS------FYL----SHLPGH---------L-GEFLALTG 197 (350)
Q Consensus 138 ~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s------~~L----~rl~g~---------~-a~~l~ltG 197 (350)
+|.|.++|+.|+++||.|++.+++.|+......+.....+-. ..+ .+..+. . ...++..|
T Consensus 65 ~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~ 144 (161)
T cd00394 65 GGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKD 144 (161)
T ss_pred CChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCC
Confidence 999999999999999999999999999988876654322101 111 111111 1 34566789
Q ss_pred CCCCHHHHHHCCCCccc
Q 018834 198 AKLNGAEMMACGLATHY 214 (350)
Q Consensus 198 ~~l~a~eA~~~GLv~~v 214 (350)
..++++||+++||||++
T Consensus 145 ~~~~a~eA~~~GLvD~i 161 (161)
T cd00394 145 LVLTAQEALEYGLVDAL 161 (161)
T ss_pred cEEcHHHHHHcCCcCcC
Confidence 99999999999999975
No 97
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.49 E-value=2.3e-13 Score=138.88 Aligned_cols=171 Identities=18% Similarity=0.218 Sum_probs=124.5
Q ss_pred EeCCEEEEEEcCCCC--CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHH
Q 018834 40 GKANSRMAILNRPSA--LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFR 117 (350)
Q Consensus 40 ~~~~v~~ItLnrp~~--~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 117 (350)
.+++|++|+++.+-. .|..+....+.+.+.|+.+..|++||+|||+-+ |.|++.... .
T Consensus 306 ~~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrin----SpGGs~~as----------------e 365 (584)
T TIGR00705 306 VQDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRIN----SPGGSVFAS----------------E 365 (584)
T ss_pred CCCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEec----CCCCCHHHH----------------H
Confidence 457899999986542 233333455678888999999999999999865 333332211 0
Q ss_pred HHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeE------eccc------ccccccCCCchHHHHhh-
Q 018834 118 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF------ATPE------TLIGFHPDAGASFYLSH- 184 (350)
Q Consensus 118 ~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f------~~Pe------~~iGl~P~~G~s~~L~r- 184 (350)
.+++.+..+...+||||+.++|.|.+||+.++++||.++|++++.+ +++. .++|+.|+...+..+.+
T Consensus 366 ~i~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~ 445 (584)
T TIGR00705 366 IIRRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANV 445 (584)
T ss_pred HHHHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCC
Confidence 1122333355678999999999999999999999999999999876 6663 58999988776654442
Q ss_pred ---------------------------ccH------HHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhc
Q 018834 185 ---------------------------LPG------HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV 231 (350)
Q Consensus 185 ---------------------------l~g------~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~ 231 (350)
.++ ......+.+|+.++|+||+++||||++ ..++++.+.+++++
T Consensus 446 s~~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~i---g~~~~Ai~~a~~la 522 (584)
T TIGR00705 446 SLLRPLTAEDQAIMQLSVEAGYRRFLSVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDAL---GGLDEAVAKAAKLA 522 (584)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccC---CCHHHHHHHHHHHc
Confidence 111 125677889999999999999999999 45666666666665
Q ss_pred cC
Q 018834 232 TD 233 (350)
Q Consensus 232 ~~ 233 (350)
..
T Consensus 523 ~~ 524 (584)
T TIGR00705 523 HC 524 (584)
T ss_pred CC
Confidence 54
No 98
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.48 E-value=6.7e-13 Score=119.36 Aligned_cols=95 Identities=19% Similarity=0.194 Sum_probs=74.7
Q ss_pred cCCCCCCCC-CHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhc
Q 018834 50 NRPSALNAL-NTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGT 128 (350)
Q Consensus 50 nrp~~~Nal-~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 128 (350)
++|...|++ +..++.+|.++|+.++.|++|++|||+. +|.|+++.... .+...+..+..
T Consensus 13 ~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~~----------------~l~~~l~~~~~ 72 (214)
T cd07022 13 PRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGVF----------------ELADAIRAARA 72 (214)
T ss_pred CCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHHH----------------HHHHHHHHHhc
Confidence 566666654 5689999999999999999999999975 67777754321 11222333334
Q ss_pred CCCcEEEEECCcccccccccccccCEEEEeCCeeEec
Q 018834 129 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 165 (350)
Q Consensus 129 ~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~ 165 (350)
+|||||+++|.|.|||+.|+++||++++++++.|+.
T Consensus 73 -~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~ 108 (214)
T cd07022 73 -GKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGS 108 (214)
T ss_pred -CCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEe
Confidence 699999999999999999999999999999998754
No 99
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.44 E-value=4.8e-13 Score=114.81 Aligned_cols=128 Identities=15% Similarity=0.170 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Q 018834 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (350)
Q Consensus 61 ~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~ 140 (350)
.+...+.+.|+.+..++.+. +.| -|.||++..- ..+...|..++||+|+.++|.
T Consensus 15 ~~~~~~~~~l~~~~~~~~i~-l~i------nspGG~~~~~-------------------~~i~~~i~~~~~pvi~~v~g~ 68 (160)
T cd07016 15 VTAKEFKDALDALGDDSDIT-VRI------NSPGGDVFAG-------------------LAIYNALKRHKGKVTVKIDGL 68 (160)
T ss_pred cCHHHHHHHHHhccCCCCEE-EEE------ECCCCCHHHH-------------------HHHHHHHHhcCCCEEEEEcch
Confidence 46778888888888774443 444 3455554321 124455677899999999999
Q ss_pred ccccccccccccCEEEEeCCeeEecccccccccCCCch---------------HHHHhhccH--HH-HHHHhhcCCCCCH
Q 018834 141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA---------------SFYLSHLPG--HL-GEFLALTGAKLNG 202 (350)
Q Consensus 141 ~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~---------------s~~L~rl~g--~~-a~~l~ltG~~l~a 202 (350)
|.|+|+.|+++||+|+++++++|.++....|..+.... ...+.+..| .. ...++.++..+++
T Consensus 69 a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a 148 (160)
T cd07016 69 AASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTA 148 (160)
T ss_pred HHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcH
Confidence 99999999999999999999999998877666544321 222555556 34 6667677778999
Q ss_pred HHHHHCCCCccc
Q 018834 203 AEMMACGLATHY 214 (350)
Q Consensus 203 ~eA~~~GLv~~v 214 (350)
+||+++||||++
T Consensus 149 ~eA~~~GliD~v 160 (160)
T cd07016 149 QEAVELGFADEI 160 (160)
T ss_pred HHHHHcCCCCcC
Confidence 999999999975
No 100
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=99.40 E-value=1.8e-12 Score=116.14 Aligned_cols=85 Identities=22% Similarity=0.221 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECC
Q 018834 60 TNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG 139 (350)
Q Consensus 60 ~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G 139 (350)
..++.+|.+.|+.++.|+++++|+|++ +|.|+|+.... .+++.+..+..++||+||+++|
T Consensus 16 ~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~~----------------~i~~~i~~~~~~~kpvia~v~g 75 (208)
T cd07023 16 GIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVASE----------------EIYREIRRLRKAKKPVVASMGD 75 (208)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHHH----------------HHHHHHHHHHhcCCcEEEEECC
Confidence 689999999999999999999999988 68899986521 1233455677889999999999
Q ss_pred cccccccccccccCEEEEeCCeeEe
Q 018834 140 VTMGGGAGVSIPGTFRVACGKTVFA 164 (350)
Q Consensus 140 ~~~GgG~~Lal~~D~riate~a~f~ 164 (350)
.|.|+|+.|+++||++++++++.|+
T Consensus 76 ~~~s~g~~lA~aaD~i~a~~~s~~g 100 (208)
T cd07023 76 VAASGGYYIAAAADKIVANPTTITG 100 (208)
T ss_pred cchhHHHHHHhhCCEEEECCCCeEE
Confidence 9999999999999999999999875
No 101
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=99.33 E-value=1.3e-11 Score=110.34 Aligned_cols=93 Identities=22% Similarity=0.218 Sum_probs=71.5
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (350)
Q Consensus 44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (350)
|++|+++-+=. ....+|.+.|+.+..|+++++|+|++ .|.|+|+.... .+.
T Consensus 2 v~vi~i~g~i~------~s~~~l~~~l~~a~~d~~i~~vvl~~----~s~Gg~~~~~~-------------------~l~ 52 (207)
T TIGR00706 2 IAILPVSGAIA------VSPEDFDKKIKRIKDDKSIKALLLRI----NSPGGTVVASE-------------------EIY 52 (207)
T ss_pred EEEEEEEEEEe------cCHHHHHHHHHHHhhCCCccEEEEEe----cCCCCCHHHHH-------------------HHH
Confidence 45566653321 23578889999999999999999987 48888875432 123
Q ss_pred HHHhcCC--CcEEEEECCcccccccccccccCEEEEeCCeeEec
Q 018834 124 YLLGTHL--KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 165 (350)
Q Consensus 124 ~~i~~~~--kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~ 165 (350)
..|..++ ||+||+++|.|.|+|+.|+++||.+++++++.++.
T Consensus 53 ~~i~~~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~ 96 (207)
T TIGR00706 53 EKLKKLKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGS 96 (207)
T ss_pred HHHHHhcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEe
Confidence 3344555 99999999999999999999999999999987654
No 102
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=99.19 E-value=1.2e-10 Score=105.39 Aligned_cols=89 Identities=11% Similarity=-0.031 Sum_probs=73.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (350)
Q Consensus 57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~ 136 (350)
.-+..++.+|.+.|+++..|++|++|||+..+..| ++.++.++. +.+..+...+|||||.
T Consensus 25 ~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el~-------------------~~i~~~~~~~kpVia~ 84 (222)
T cd07018 25 ESSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEELR-------------------QALERFRASGKPVIAY 84 (222)
T ss_pred CcCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHHH-------------------HHHHHHHHhCCeEEEE
Confidence 34567889999999999999999999999988776 666665543 2233344579999999
Q ss_pred ECCcccccccccccccCEEEEeCCeeEecc
Q 018834 137 LNGVTMGGGAGVSIPGTFRVACGKTVFATP 166 (350)
Q Consensus 137 i~G~~~GgG~~Lal~~D~riate~a~f~~P 166 (350)
++| +.+||+.|+++||.+++.+.+.|+..
T Consensus 85 ~~~-~~sggy~lasaad~I~a~p~~~vg~i 113 (222)
T cd07018 85 ADG-YSQGQYYLASAADEIYLNPSGSVELT 113 (222)
T ss_pred eCC-CCchhhhhhhhCCEEEECCCceEEee
Confidence 998 88999999999999999999988874
No 103
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=99.16 E-value=2.1e-10 Score=99.94 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=97.9
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (350)
.+|.++ ..++..+...+.+.|++++.++ ++.|+|.= =|.||++.... .+..
T Consensus 2 ~vi~i~-----g~I~~~~~~~l~~~l~~a~~~~-~~~ivl~i----nspGG~v~~~~-------------------~I~~ 52 (178)
T cd07021 2 YVIPIE-----GEIDPGLAAFVERALKEAKEEG-ADAVVLDI----DTPGGRVDSAL-------------------EIVD 52 (178)
T ss_pred EEEEEe-----eEECHHHHHHHHHHHHHHHhCC-CCeEEEEE----ECcCCCHHHHH-------------------HHHH
Confidence 445554 2466778888999999999886 67777643 35566554321 2345
Q ss_pred HHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCch--------HHH------HhhccHH--
Q 018834 125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA--------SFY------LSHLPGH-- 188 (350)
Q Consensus 125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~--------s~~------L~rl~g~-- 188 (350)
.|..+++|+|++++|.|.|+|+.|+++||++++++++.|+.+.. ++..|. +.. +.+.-|.
T Consensus 53 ~l~~~~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~----v~~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~ 128 (178)
T cd07021 53 LILNSPIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEP----IPGDGNGAADEKVQSYWRAKMRAAAEKKGRDP 128 (178)
T ss_pred HHHhCCCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCee----EcCCCccchhHHHHHHHHHHHHHHHHHhCCCH
Confidence 57789999999999999999999999999999999999998744 333333 111 1111121
Q ss_pred H-HHHHhhcC-------------CCCCHHHHHHCCCCccccCC
Q 018834 189 L-GEFLALTG-------------AKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 189 ~-a~~l~ltG-------------~~l~a~eA~~~GLv~~vv~~ 217 (350)
. +..|+--. -.++++||++.|++|.++++
T Consensus 129 ~~a~~mv~~~~~v~~~~~~~~~~l~lta~eA~~~g~~d~ia~~ 171 (178)
T cd07021 129 DIAEAMVDKDIEVPGVGIKGGELLTLTADEALKVGYAEGIAGS 171 (178)
T ss_pred HHHHHHhhhhcccccccccccceeeeCHHHHHHhCCeEEEECC
Confidence 1 33443333 27999999999999999764
No 104
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.60 E-value=6.7e-07 Score=77.36 Aligned_cols=137 Identities=10% Similarity=0.202 Sum_probs=97.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (350)
Q Consensus 57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~ 136 (350)
.++..+..-|.+.++.++.| +++.|+|.= =|.||++.... .+...|...++||++.
T Consensus 9 ~I~~~~~~~l~~~l~~A~~~-~~~~i~l~i----nSPGG~v~~~~-------------------~I~~~i~~~~~pvv~~ 64 (172)
T cd07015 9 QITSYTYDQFDRYITIAEQD-NAEAIIIEL----DTPGGRADAAG-------------------NIVQRIQQSKIPVIIY 64 (172)
T ss_pred EECHhHHHHHHHHHHHHhcC-CCCeEEEEE----ECCCCCHHHHH-------------------HHHHHHHhcCcCEEEE
Confidence 36677788888999988865 577777743 36666654321 1233355679999999
Q ss_pred EC---CcccccccccccccCEEEEeCCeeEecccccccccCC----Cc----hHHHHhhc------cH---HHHHHHhhc
Q 018834 137 LN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD----AG----ASFYLSHL------PG---HLGEFLALT 196 (350)
Q Consensus 137 i~---G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~----~G----~s~~L~rl------~g---~~a~~l~lt 196 (350)
++ |.|..+|.-++++||.+++.+++.++....-.|..++ .. .++.+.++ -| ..+..++-.
T Consensus 65 v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~ 144 (172)
T cd07015 65 VYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITK 144 (172)
T ss_pred EecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHh
Confidence 99 9999999999999999999999999987764433221 00 01222222 12 124566677
Q ss_pred CCCCCHHHHHHCCCCccccCC
Q 018834 197 GAKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 197 G~~l~a~eA~~~GLv~~vv~~ 217 (350)
...++++||+++|++|+++.+
T Consensus 145 ~~~lta~EA~~~G~iD~ia~~ 165 (172)
T cd07015 145 DLSLTPEEALKYGVIEVVARD 165 (172)
T ss_pred hcCcCHHHHHHcCCceeeeCC
Confidence 788999999999999999875
No 105
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=98.55 E-value=6.4e-07 Score=76.98 Aligned_cols=132 Identities=13% Similarity=0.067 Sum_probs=86.5
Q ss_pred CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (350)
Q Consensus 58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i 137 (350)
++..+...+.+.|..++.++.++.|+|.= =|.||++..- ..+...|...++|+++.+
T Consensus 9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~I----nSpGG~v~~~-------------------~~i~~~i~~~~~~v~~~~ 65 (162)
T cd07013 9 VEDISANQFAAQLLFLGAVNPEKDIYLYI----NSPGGDVFAG-------------------MAIYDTIKFIKADVVTII 65 (162)
T ss_pred ECcHHHHHHHHHHHHHhcCCCCCCEEEEE----ECCCCcHHHH-------------------HHHHHHHHhcCCCceEEE
Confidence 46788999999999999987777666643 3556654321 123334556789999999
Q ss_pred CCcccccccccccccC--EEEEeCCeeEecccccccccCCCchH--HH----Hhh-----------ccHH--H-HHHHhh
Q 018834 138 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS--FY----LSH-----------LPGH--L-GEFLAL 195 (350)
Q Consensus 138 ~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s--~~----L~r-----------l~g~--~-a~~l~l 195 (350)
.|.|.++|.-|+++|| .|++.+++.|.+....-|... ... .. +.+ ..|. . -..++-
T Consensus 66 ~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g--~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~ 143 (162)
T cd07013 66 DGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLG--DATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLE 143 (162)
T ss_pred EeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHc
Confidence 9999999999999999 677777777765433222111 111 00 111 0111 1 133445
Q ss_pred cCCCCCHHHHHHCCCCccc
Q 018834 196 TGAKLNGAEMMACGLATHY 214 (350)
Q Consensus 196 tG~~l~a~eA~~~GLv~~v 214 (350)
.+..++|+||+++||||++
T Consensus 144 ~~~~~sa~eA~~~GliD~i 162 (162)
T cd07013 144 RDTWLSAREAVEYGFADTI 162 (162)
T ss_pred CCccccHHHHHHcCCCCcC
Confidence 5666799999999999975
No 106
>PRK10949 protease 4; Provisional
Probab=98.52 E-value=1.5e-06 Score=89.28 Aligned_cols=165 Identities=16% Similarity=0.179 Sum_probs=103.3
Q ss_pred eCCEEEEEEcC-----CCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834 41 KANSRMAILNR-----PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115 (350)
Q Consensus 41 ~~~v~~ItLnr-----p~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 115 (350)
.+.|++|+++- ....+.++. +.+.+.|+.+..|++||+|||+-+ |.|+.....
T Consensus 325 ~~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~as--------------- 382 (618)
T PRK10949 325 GGSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVN----SPGGSVTAS--------------- 382 (618)
T ss_pred CCeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEec----CCCCcHHHH---------------
Confidence 45677776652 222234444 456788889999999999999865 444433211
Q ss_pred HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEec-------cc-----ccccccCCCchHHH--
Q 018834 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT-------PE-----TLIGFHPDAGASFY-- 181 (350)
Q Consensus 116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~-------Pe-----~~iGl~P~~G~s~~-- 181 (350)
..+++.+..+....||||+.+.|.|..||..++++||.++|.+.+..+- |. -++|+-+++-.+-.
T Consensus 383 -e~i~~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~ 461 (618)
T PRK10949 383 -EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLA 461 (618)
T ss_pred -HHHHHHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccC
Confidence 1122233334456899999999999999999999999999999764332 11 13444333211110
Q ss_pred ---------------Hhhcc-----------------HHHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHH
Q 018834 182 ---------------LSHLP-----------------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK 229 (350)
Q Consensus 182 ---------------L~rl~-----------------g~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~ 229 (350)
+...+ ...-..-+..|+.++|++|++.||||++- .++++.+.+++
T Consensus 462 ~~~~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~lG---~~~~ai~~a~~ 538 (618)
T PRK10949 462 DVSITKALPPEFQQMMQLSIENGYKRFITLVADSRHKTPEQIDKIAQGHVWTGQDAKANGLVDSLG---DFDDAVAKAAE 538 (618)
T ss_pred CccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhcCCcccHHHHHHcCCCccCC---CHHHHHHHHHH
Confidence 11111 00112234689999999999999999984 46665555555
Q ss_pred hc
Q 018834 230 LV 231 (350)
Q Consensus 230 l~ 231 (350)
++
T Consensus 539 ~a 540 (618)
T PRK10949 539 LA 540 (618)
T ss_pred Hc
Confidence 44
No 107
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.47 E-value=7.9e-07 Score=79.05 Aligned_cols=135 Identities=16% Similarity=0.074 Sum_probs=83.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (350)
Q Consensus 57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~ 136 (350)
.++..+...+...|..++.++..+-|.|.= =|.|||+..-. .+...|...+.|+++.
T Consensus 39 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~I----nSpGG~v~~g~-------------------~I~d~i~~~~~~v~t~ 95 (200)
T PRK00277 39 EVEDHMANLIVAQLLFLEAEDPDKDIYLYI----NSPGGSVTAGL-------------------AIYDTMQFIKPDVSTI 95 (200)
T ss_pred EECHHHHHHHHHHHHHhhccCCCCCEEEEE----ECCCCcHHHHH-------------------HHHHHHHhcCCCEEEE
Confidence 477889999999999888765444333321 24455553211 1223355667899999
Q ss_pred ECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchHH-------H-----------HhhccHH---HHHHH
Q 018834 137 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF-------Y-----------LSHLPGH---LGEFL 193 (350)
Q Consensus 137 i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s~-------~-----------L~rl~g~---~a~~l 193 (350)
++|.|.+.|.-|+++++ .|++.+++++.+....-|. .|-+. . ++...|. ....+
T Consensus 96 ~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~ 172 (200)
T PRK00277 96 CIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGF---QGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKD 172 (200)
T ss_pred EEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccc---cCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 99999999998888743 4666655555543332111 11111 1 1111221 12334
Q ss_pred hhcCCCCCHHHHHHCCCCccccCC
Q 018834 194 ALTGAKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 194 ~ltG~~l~a~eA~~~GLv~~vv~~ 217 (350)
+-.+..++|+||+++||||+++.+
T Consensus 173 ~~~~~~lsa~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 173 TDRDNFMSAEEAKEYGLIDEVLTK 196 (200)
T ss_pred hhCCccccHHHHHHcCCccEEeec
Confidence 456778999999999999999875
No 108
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.44 E-value=6.7e-07 Score=84.41 Aligned_cols=168 Identities=18% Similarity=0.070 Sum_probs=131.2
Q ss_pred CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHHHHHHHHHHH
Q 018834 43 NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYS 121 (350)
Q Consensus 43 ~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 121 (350)
++..++++ |+ .|..|.++..+|..-++.+..+..+++..+++.. +.|+||.|..+..- +.......++-++.+
T Consensus 66 ~~~~~dmv-ie-av~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vv----g~h~fspa~~m~LlE 139 (380)
T KOG1683|consen 66 GFANADMV-IE-AVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVV----GMHFFSPAHWMQLLE 139 (380)
T ss_pred ccccccee-cc-chhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhc----cccccCHHHHHHHHH
Confidence 67778887 66 4999999999999999999999889999999987 89999999988763 233333445566778
Q ss_pred HHHHHhcCCCcEEEEECCcccccc--cccccccCEEEEeC--CeeEecccccccc-cCCCchHHHHhhccHHH-HHHHhh
Q 018834 122 FIYLLGTHLKPHVAILNGVTMGGG--AGVSIPGTFRVACG--KTVFATPETLIGF-HPDAGASFYLSHLPGHL-GEFLAL 195 (350)
Q Consensus 122 l~~~i~~~~kP~Ia~i~G~~~GgG--~~Lal~~D~riate--~a~f~~Pe~~iGl-~P~~G~s~~L~rl~g~~-a~~l~l 195 (350)
++...++++.|+.+++||.+--|+ +-+.-+|+||+..- .=..+..+...++ .|.+-.-.+... .|.. |..-+-
T Consensus 140 ii~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~-fGf~~g~~~L~ 218 (380)
T KOG1683|consen 140 IILALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSLITK-FGFRVGERALA 218 (380)
T ss_pred HHHhcCCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHHHHh-cCccccHHHHh
Confidence 899999999999999999999998 78899999999873 3334567777774 333322222322 3444 555556
Q ss_pred cCCCCCHHHHHHCCCCccccCC
Q 018834 196 TGAKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 196 tG~~l~a~eA~~~GLv~~vv~~ 217 (350)
-|.-++-.||++-|+++.+.|.
T Consensus 219 d~~gfdv~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 219 DGVGFDVAEALAVGLGDEIGPR 240 (380)
T ss_pred hccCccHHHHHhhccchhccch
Confidence 7888999999999999999885
No 109
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.27 E-value=9.4e-05 Score=68.03 Aligned_cols=138 Identities=16% Similarity=0.086 Sum_probs=93.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (350)
Q Consensus 55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (350)
..+++.+-.+...+.++.+... ++-+|-|.-++.++. |.+-. .....+...++...+.....|+|
T Consensus 76 ~G~~~~~g~rKa~R~~~lA~~~-~lPvV~lvDtpGa~~-g~~aE-------------~~G~~~~ia~~~~~~s~~~VP~I 140 (256)
T PRK12319 76 FGQPHPEGYRKALRLMKQAEKF-GRPVVTFINTAGAYP-GVGAE-------------ERGQGEAIARNLMEMSDLKVPII 140 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCcCC-CHhHH-------------hccHHHHHHHHHHHHhCCCCCEE
Confidence 4678889999999999888775 456665544333332 32211 01122344456677788999999
Q ss_pred EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH--HHHHHhhcCCCCCHHHHHHCCCCc
Q 018834 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--LGEFLALTGAKLNGAEMMACGLAT 212 (350)
Q Consensus 135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~--~a~~l~ltG~~l~a~eA~~~GLv~ 212 (350)
++|-|.|.|||......||++++.+++.|+ +.++-|++..+-+-... .+.++. .+++.++.+.|+||
T Consensus 141 sVI~G~~~gGgA~a~~~~D~v~m~~~a~~~-------v~~pe~~a~il~~~~~~a~~aa~~~----~~~a~~l~~~g~iD 209 (256)
T PRK12319 141 AIIIGEGGSGGALALAVADQVWMLENTMYA-------VLSPEGFASILWKDGSRATEAAELM----KITAGELLEMGVVD 209 (256)
T ss_pred EEEeCCcCcHHHHHhhcCCEEEEecCceEE-------EcCHHHHHHHHhcCcccHHHHHHHc----CCCHHHHHHCCCCc
Confidence 999999988888777789999999988766 33334444444332111 223332 77999999999999
Q ss_pred cccCCC
Q 018834 213 HYSVSE 218 (350)
Q Consensus 213 ~vv~~~ 218 (350)
.|+|+.
T Consensus 210 ~ii~e~ 215 (256)
T PRK12319 210 KVIPEH 215 (256)
T ss_pred EecCCC
Confidence 999854
No 110
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.25 E-value=1.5e-05 Score=75.96 Aligned_cols=82 Identities=20% Similarity=0.301 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Q 018834 62 MGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 141 (350)
Q Consensus 62 m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~ 141 (350)
-.+.+.+.|+.+..|++++.|+|.= =|.||.+..- ..+++.+.++..-. ||++.|+++|
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL~i----nSPGG~v~as----------------~~i~~~l~~l~~~~-PV~v~v~~~A 139 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVLRI----NSPGGSVVAS----------------ELIARALKRLRAKK-PVVVSVGGYA 139 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEEEE----ECcCCchhHH----------------HHHHHHHHHHhhcC-CEEEEECCee
Confidence 3556677788889999999998853 4566654321 12233334444444 9999999999
Q ss_pred cccccccccccCEEEEeCCeeEe
Q 018834 142 MGGGAGVSIPGTFRVACGKTVFA 164 (350)
Q Consensus 142 ~GgG~~Lal~~D~riate~a~f~ 164 (350)
+.||.-++++||.+||++++..+
T Consensus 140 ASGGY~IA~aAd~I~a~p~si~G 162 (317)
T COG0616 140 ASGGYYIALAADKIVADPSSITG 162 (317)
T ss_pred cchhhhhhccCCEEEecCCceee
Confidence 99999999999999999998666
No 111
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.24 E-value=6e-06 Score=73.80 Aligned_cols=143 Identities=15% Similarity=0.069 Sum_probs=95.9
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (350)
.+|.|+- -++..+..++.+.|..++..+..+.|.|.= =|.||++..-. .+..
T Consensus 36 r~I~l~g-----~I~~~~~~~i~~~L~~l~~~~~~~~I~l~I----NSpGG~v~~g~-------------------~I~d 87 (207)
T PRK12553 36 RIIFLGG-----QVDDASANDVMAQLLVLESIDPDRDITLYI----NSPGGSVTAGD-------------------AIYD 87 (207)
T ss_pred eEEEEcc-----eECHHHHHHHHHHHHHHHhCCCCCCEEEEE----eCCCCcHHHHH-------------------HHHH
Confidence 4455653 377899999999999998755334333321 24556554311 1333
Q ss_pred HHhcCCCcEEEEECCcccccccccccccC--EEEEeCCeeEecccccc-cccCCCchH------------------HHHh
Q 018834 125 LLGTHLKPHVAILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLI-GFHPDAGAS------------------FYLS 183 (350)
Q Consensus 125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~i-Gl~P~~G~s------------------~~L~ 183 (350)
.|..++.|+++.+.|.|.+.|.-|.++|| .|++.+++.|.+-.... |. ..|-. ..+.
T Consensus 88 ~i~~~~~~v~t~~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~--~~G~a~d~~~~~~~l~~~~~~~~~~ya 165 (207)
T PRK12553 88 TIQFIRPDVQTVCTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGG--IRGQASDLEIQAREILRMRERLERILA 165 (207)
T ss_pred HHHhcCCCcEEEEEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCC--CccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567789999999999999999999999 69999999988876543 21 12211 1111
Q ss_pred hccHH---HHHHHhhcCCCCCHHHHHHCCCCccccCC
Q 018834 184 HLPGH---LGEFLALTGAKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 184 rl~g~---~a~~l~ltG~~l~a~eA~~~GLv~~vv~~ 217 (350)
+..|. ....++-.+..++|+||+++||||+++.+
T Consensus 166 ~~tg~~~e~i~~~~~~~~~lta~EA~e~GliD~I~~~ 202 (207)
T PRK12553 166 EHTGQSVEKIRKDTDRDKWLTAEEAKDYGLVDQIITS 202 (207)
T ss_pred HHhCCCHHHHHHHHhcCccccHHHHHHcCCccEEcCc
Confidence 11221 13345557889999999999999999865
No 112
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=98.23 E-value=7.8e-06 Score=70.89 Aligned_cols=132 Identities=17% Similarity=0.090 Sum_probs=91.0
Q ss_pred CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (350)
Q Consensus 58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i 137 (350)
++.++...+...+..++.++..+.|+|.= =|.|||+..-. .+...|...+.|+++.+
T Consensus 18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~i----nSpGG~v~~~~-------------------~i~~~l~~~~~~v~t~~ 74 (171)
T cd07017 18 IDDEVANLIIAQLLYLESEDPKKPIYLYI----NSPGGSVTAGL-------------------AIYDTMQYIKPPVSTIC 74 (171)
T ss_pred EcHHHHHHHHHHHHHHHccCCCCceEEEE----ECCCCCHHHHH-------------------HHHHHHHhcCCCEEEEE
Confidence 56788999999999999876655554432 24555554321 12223445689999999
Q ss_pred CCcccccccccccccC--EEEEeCCeeEecccccccccCCCchHHH------Hhhc-----------cHH--H-HHHHhh
Q 018834 138 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASFY------LSHL-----------PGH--L-GEFLAL 195 (350)
Q Consensus 138 ~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s~~------L~rl-----------~g~--~-a~~l~l 195 (350)
.|.|.++|.-+++++| .|++.+++.|.+-+...+..-. ..-. +.++ .|. . -..++-
T Consensus 75 ~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~--~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~ 152 (171)
T cd07017 75 LGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQ--ASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTD 152 (171)
T ss_pred EeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhh
Confidence 9999999999999999 7999999999888876554322 1111 1010 111 1 133445
Q ss_pred cCCCCCHHHHHHCCCCccc
Q 018834 196 TGAKLNGAEMMACGLATHY 214 (350)
Q Consensus 196 tG~~l~a~eA~~~GLv~~v 214 (350)
.+..++++||+++||+|+|
T Consensus 153 ~~~~lta~EA~e~GiiD~V 171 (171)
T cd07017 153 RDRYMSAEEAKEYGLIDKI 171 (171)
T ss_pred CCccccHHHHHHcCCCccC
Confidence 7888999999999999975
No 113
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.16 E-value=2.1e-05 Score=69.73 Aligned_cols=137 Identities=15% Similarity=0.088 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (350)
Q Consensus 58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i 137 (350)
++..+...+.+.|..++..+..+.|.|.= =|.||++..-. .+...|...+.||++.+
T Consensus 32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~I----NSpGG~v~ag~-------------------aI~d~i~~~~~~V~t~v 88 (197)
T PRK14512 32 INKDLSELFQEKILLLEALDSKKPIFVYI----DSEGGDIDAGF-------------------AIFNMIRFVKPKVFTIG 88 (197)
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECCCCCHHHHH-------------------HHHHHHHhCCCCEEEEE
Confidence 66788889999888887623334333321 25566654311 23334556788999999
Q ss_pred CCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHH----HHhhccHHH--------------HHHHhhcC
Q 018834 138 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----YLSHLPGHL--------------GEFLALTG 197 (350)
Q Consensus 138 ~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~----~L~rl~g~~--------------a~~l~ltG 197 (350)
+|.|.+.|.-|+++||- |++.++++|-+-...-|+.....-.. .+-+..... ...++-..
T Consensus 89 ~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~~d 168 (197)
T PRK14512 89 VGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTDRD 168 (197)
T ss_pred EeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhhcC
Confidence 99999999999999985 99999998866554333311111000 111111111 23334445
Q ss_pred CCCCHHHHHHCCCCccccCC
Q 018834 198 AKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 198 ~~l~a~eA~~~GLv~~vv~~ 217 (350)
..++|+||+++||||+|+++
T Consensus 169 ~~lta~EA~~yGliD~I~~~ 188 (197)
T PRK14512 169 FWLDSSSAVKYGLVFEVVET 188 (197)
T ss_pred cccCHHHHHHcCCccEeecC
Confidence 78999999999999999975
No 114
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=98.10 E-value=0.00012 Score=68.96 Aligned_cols=139 Identities=12% Similarity=0.013 Sum_probs=91.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (350)
Q Consensus 55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (350)
..+++++-.+...+.++.++.. ++-+|-|--++++++ |.+-.+ ....+...+....+.....|+|
T Consensus 132 ~G~~~p~g~rKa~Rlm~lA~~f-~lPIItlvDTpGA~~-G~~AE~-------------~G~~~aiar~l~~~a~~~VP~I 196 (322)
T CHL00198 132 FGMPSPGGYRKALRLMKHANKF-GLPILTFIDTPGAWA-GVKAEK-------------LGQGEAIAVNLREMFSFEVPII 196 (322)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcCc-CHHHHH-------------HhHHHHHHHHHHHHHcCCCCEE
Confidence 4678899999999999988875 455555443333333 321111 1112334445566678899999
Q ss_pred EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHHHHCCCCccc
Q 018834 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214 (350)
Q Consensus 135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA~~~GLv~~v 214 (350)
++|-|.+.|||.-....||++++.+++.|+ +.++-|++..|-+-.... .. +-...+++|+|++++|+||.|
T Consensus 197 sVViGeggsGGAlal~~aD~V~m~e~a~~s-------VisPEg~a~Il~~d~~~a-~~-aA~~~~ita~dL~~~giiD~i 267 (322)
T CHL00198 197 CTIIGEGGSGGALGIGIGDSIMMLEYAVYT-------VATPEACAAILWKDSKKS-LD-AAEALKITSEDLKVLGIIDEI 267 (322)
T ss_pred EEEeCcccHHHHHhhhcCCeEEEeCCeEEE-------ecCHHHHHHHHhcchhhH-HH-HHHHcCCCHHHHHhCCCCeEe
Confidence 999999987776544459999999998776 444444454454432221 11 223357899999999999999
Q ss_pred cCC
Q 018834 215 SVS 217 (350)
Q Consensus 215 v~~ 217 (350)
+|.
T Consensus 268 i~E 270 (322)
T CHL00198 268 IPE 270 (322)
T ss_pred ccC
Confidence 985
No 115
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=98.06 E-value=1.1e-05 Score=70.59 Aligned_cols=142 Identities=18% Similarity=0.209 Sum_probs=92.1
Q ss_pred EEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCce--EEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834 46 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (350)
Q Consensus 46 ~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (350)
+|.|+.| +|.++...+.+.|..++.++..+ .|.|. |.|||+..-. .+.
T Consensus 18 ~i~l~g~-----I~~~~~~~~~~~L~~l~~~~~~~~i~i~IN------SpGG~v~~g~-------------------~i~ 67 (182)
T PF00574_consen 18 IIFLNGP-----IDEESANRLISQLLYLENEDKNKPINIYIN------SPGGDVDAGL-------------------AIY 67 (182)
T ss_dssp EEEEESS-----BSHHHHHHHHHHHHHHHHHTSSSEEEEEEE------ECEBCHHHHH-------------------HHH
T ss_pred EEEECCc-----cCHHHHHHHHHHHHHHhccCCCceEEEEEc------CCCCccHHHH-------------------HHH
Confidence 3455543 78899999999888775333322 23344 4566654321 234
Q ss_pred HHHhcCCCcEEEEECCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHH----HHhhccHHH--------
Q 018834 124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----YLSHLPGHL-------- 189 (350)
Q Consensus 124 ~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~----~L~rl~g~~-------- 189 (350)
..|..++.|+++.+.|.|.+.|.-+.++|+. |++.+++.|.+-+...+......-.. .+.+.....
T Consensus 68 ~~i~~~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~t 147 (182)
T PF00574_consen 68 DAIRSSKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERT 147 (182)
T ss_dssp HHHHHSSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567789999999999999999999999999 99999999999888666533111100 111111111
Q ss_pred ------HHHHhhcCCCCCHHHHHHCCCCccccCC
Q 018834 190 ------GEFLALTGAKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 190 ------a~~l~ltG~~l~a~eA~~~GLv~~vv~~ 217 (350)
-..++-....++++||+++||||+|+.+
T Consensus 148 g~~~~~i~~~~~~~~~l~a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 148 GLSKEEIEELMDRDTWLSAEEALEYGIIDEIIES 181 (182)
T ss_dssp TS-HHHHHHHCSSTEEEEHHHHHHHTSSSEEESS
T ss_pred CCcHHHHHHHHhCCccccHHHHHHcCCCCEeccC
Confidence 1233344566899999999999999764
No 116
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=98.03 E-value=0.00089 Score=63.18 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (350)
Q Consensus 55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (350)
..+++.+-.+...+.++.++.- ++-+|-|.-++++++ |.+..+ ....+...++...+.....|+|
T Consensus 129 ~G~~~p~g~rKa~R~m~lA~~f-~iPvVtlvDTpGa~~-g~~aE~-------------~G~~~aia~~l~a~s~~~VP~I 193 (316)
T TIGR00513 129 FGMPAPEGYRKALRLMKMAERF-KMPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLGVPVI 193 (316)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCCCC-CHHHHH-------------HHHHHHHHHHHHHHHcCCCCEE
Confidence 4678899999999999888765 556665543333333 322111 1123344556667788999999
Q ss_pred EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH--HH-HHHHhhcCCCCCHHHHHHCCCC
Q 018834 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HL-GEFLALTGAKLNGAEMMACGLA 211 (350)
Q Consensus 135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g--~~-a~~l~ltG~~l~a~eA~~~GLv 211 (350)
++|-|.|.|||..-...||++++.+++.++ +.++-|++..|-+-.. .. +.+ ..+++.++.+.|+|
T Consensus 194 sVViGeggsGGAla~~~aD~v~m~~~a~~s-------VisPEg~a~Il~kd~~~a~~aae~-----~~~ta~~l~~~G~i 261 (316)
T TIGR00513 194 CTVIGEGGSGGALAIGVGDKVNMLEYSTYS-------VISPEGCAAILWKDASKAPKAAEA-----MKITAPDLKELGLI 261 (316)
T ss_pred EEEecccccHHHhhhccCCEEEEecCceEE-------ecCHHHHHHHhccchhhHHHHHHH-----ccCCHHHHHHCCCC
Confidence 999999977776544469999999988765 4444445544544221 12 333 56689999999999
Q ss_pred ccccCC
Q 018834 212 THYSVS 217 (350)
Q Consensus 212 ~~vv~~ 217 (350)
|.|+|.
T Consensus 262 D~II~e 267 (316)
T TIGR00513 262 DSIIPE 267 (316)
T ss_pred eEeccC
Confidence 999985
No 117
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=97.98 E-value=0.00076 Score=63.72 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=93.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (350)
Q Consensus 55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (350)
..+++.+-.+...+.++.++.- ++-+|-|.-++++++ |.+-.+ ....+...++...+.....|+|
T Consensus 129 ~G~~~peg~rKa~R~m~lA~~f-~lPIVtlvDTpGa~~-G~~aE~-------------~G~~~aia~~l~~~a~~~VP~I 193 (319)
T PRK05724 129 FGMPRPEGYRKALRLMKMAEKF-GLPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLKVPII 193 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC-CHHHHh-------------ccHHHHHHHHHHHHhCCCCCEE
Confidence 4668899999999998888765 566665554433333 322110 1123444556777889999999
Q ss_pred EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHHHHCCCCccc
Q 018834 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214 (350)
Q Consensus 135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA~~~GLv~~v 214 (350)
++|-|.+.|||......||++++.+++.|+ ..++-|++..|.+-... +... -.-..+++.++.+.|+||.|
T Consensus 194 sVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~~-a~~a-ae~~~ita~~l~~~g~iD~I 264 (319)
T PRK05724 194 CTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDASK-APEA-AEAMKITAQDLKELGIIDEI 264 (319)
T ss_pred EEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCchh-HHHH-HHHcCCCHHHHHHCCCceEe
Confidence 999999977776444459999999887665 55555555555543322 1111 11456899999999999999
Q ss_pred cCC
Q 018834 215 SVS 217 (350)
Q Consensus 215 v~~ 217 (350)
+|.
T Consensus 265 I~E 267 (319)
T PRK05724 265 IPE 267 (319)
T ss_pred ccC
Confidence 985
No 118
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=97.96 E-value=0.00011 Score=64.93 Aligned_cols=144 Identities=15% Similarity=0.058 Sum_probs=91.3
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (350)
.+|.|.-| ++..+...+...|..++.++..+-|.|.= =|.|||+..-. .+..
T Consensus 27 riI~l~g~-----I~~~~~~~ii~~L~~l~~~~~~~~i~l~I----nSpGG~v~~g~-------------------~I~d 78 (191)
T TIGR00493 27 RIIFLSGE-----VNDSVANLIVAQLLFLEAEDPEKDIYLYI----NSPGGSITAGL-------------------AIYD 78 (191)
T ss_pred eEEEEccE-----EChHHHHHHHHHHHHhhccCCCCCEEEEE----ECCCCCHHHHH-------------------HHHH
Confidence 44556443 66788888989888888765444444321 24466653211 1222
Q ss_pred HHhcCCCcEEEEECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchH----HHHhhc-----------cH
Q 018834 125 LLGTHLKPHVAILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS----FYLSHL-----------PG 187 (350)
Q Consensus 125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s----~~L~rl-----------~g 187 (350)
.|..++.|+...+.|.|.+.|.-|++++| .|++.+++.|.+.+..-|......-. ..+.++ .|
T Consensus 79 ~l~~~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg 158 (191)
T TIGR00493 79 TMQFIKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTG 158 (191)
T ss_pred HHHhcCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHC
Confidence 34556677888889999999988888765 69999999998866544432211111 111111 12
Q ss_pred H---HHHHHhhcCCCCCHHHHHHCCCCccccC
Q 018834 188 H---LGEFLALTGAKLNGAEMMACGLATHYSV 216 (350)
Q Consensus 188 ~---~a~~l~ltG~~l~a~eA~~~GLv~~vv~ 216 (350)
. ....++-.+..++|+||+++||||+++.
T Consensus 159 ~~~~~i~~~~~~~~~lta~EA~~~GliD~ii~ 190 (191)
T TIGR00493 159 QSLEQIEKDTERDFFMSAEEAKEYGLIDSVLT 190 (191)
T ss_pred cCHHHHHHHhhCCccCcHHHHHHcCCccEEec
Confidence 1 1234556678899999999999999874
No 119
>PRK11778 putative inner membrane peptidase; Provisional
Probab=97.96 E-value=4.1e-05 Score=72.74 Aligned_cols=101 Identities=10% Similarity=0.059 Sum_probs=64.0
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (350)
Q Consensus 41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (350)
.+.|++|.++-+=..+. ...+-+++...++.+..+ .+|||+-+ |.||.+..... .. .
T Consensus 89 ~~~v~VI~~~G~I~~~~-~~~l~e~i~a~l~~A~~~---~aVvLrid----SpGG~v~~s~~---------a~---~--- 145 (330)
T PRK11778 89 KPRLFVLDFKGDIDASE-VESLREEITAILAVAKPG---DEVLLRLE----SPGGVVHGYGL---------AA---S--- 145 (330)
T ss_pred CCeEEEEEEEEEECCCc-chhhHHHHHHHHHhccCC---CeEEEEEe----CCCCchhHHHH---------HH---H---
Confidence 45788888874432111 123445566656555433 46777643 44554432110 00 0
Q ss_pred HHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEec
Q 018834 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 165 (350)
Q Consensus 121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~ 165 (350)
...++....||+++.+++.|..||..++++||.+++.+.+.++-
T Consensus 146 -~l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGS 189 (330)
T PRK11778 146 -QLQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGS 189 (330)
T ss_pred -HHHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEe
Confidence 12334567899999999999999999999999999999886653
No 120
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=97.94 E-value=6.5e-05 Score=66.68 Aligned_cols=144 Identities=14% Similarity=0.085 Sum_probs=94.7
Q ss_pred EEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHH
Q 018834 46 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 125 (350)
Q Consensus 46 ~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (350)
+|-|+-| +|.++.+.+...|..++.++..+-|.|.= =|.|||+..- ..+...
T Consensus 32 iifl~~~-----i~~~~a~~ii~~ll~L~~~~~~~~I~l~I----NSpGG~v~~g-------------------~aIyd~ 83 (200)
T CHL00028 32 LLFLGQE-----VDDEIANQLIGLMVYLSIEDDTKDLYLFI----NSPGGSVISG-------------------LAIYDT 83 (200)
T ss_pred EEEECCe-----ecHHHHHHHHHHHHHHhccCCCCCEEEEE----eCCCcchhhH-------------------HHHHHH
Confidence 4455544 88999999999999988654334333211 2445554321 113334
Q ss_pred HhcCCCcEEEEECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchHHH------HhhccHHH--------
Q 018834 126 LGTHLKPHVAILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASFY------LSHLPGHL-------- 189 (350)
Q Consensus 126 i~~~~kP~Ia~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s~~------L~rl~g~~-------- 189 (350)
|...+.||.+.+.|.|.+.|.-|.+++| .|++.++++|-+.....|+.-+ -++-. +-++....
T Consensus 84 m~~~~~~V~Tv~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G-~a~di~~~a~~l~~~~~~~~~~ya~~T 162 (200)
T CHL00028 84 MQFVKPDVHTICLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEG-QASEFVLEAEELLKLRETITRVYAQRT 162 (200)
T ss_pred HHhcCCCEEEEEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677889999999999999999999998 6999999999887766553111 11111 11111111
Q ss_pred ------HHHHhhcCCCCCHHHHHHCCCCccccCCC
Q 018834 190 ------GEFLALTGAKLNGAEMMACGLATHYSVSE 218 (350)
Q Consensus 190 ------a~~l~ltG~~l~a~eA~~~GLv~~vv~~~ 218 (350)
-..++-....++|+||+++||||+|+.+.
T Consensus 163 g~~~e~i~~~~~r~~~lta~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 163 GKPLWVISEDMERDVFMSATEAKAYGIVDLVAVNN 197 (200)
T ss_pred CcCHHHHHHHhhcCccCCHHHHHHcCCCcEEeecC
Confidence 13344556679999999999999998754
No 121
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=97.93 E-value=0.0015 Score=63.31 Aligned_cols=136 Identities=13% Similarity=0.045 Sum_probs=88.9
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (350)
Q Consensus 56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia 135 (350)
.+++.+-.+...+.++.++.. ++-+|-|.-+++++ .|.+..+ ....+.+.+..+.+.....|+|+
T Consensus 200 G~~~peGyRKAlR~mklAekf-~lPIVtLVDTpGA~-pG~~AEe-------------~Gqa~aIAr~l~ams~l~VPiIS 264 (431)
T PLN03230 200 AMPQPNGYRKALRFMRHAEKF-GFPILTFVDTPGAY-AGIKAEE-------------LGQGEAIAFNLREMFGLRVPIIA 264 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcC-CCHHHHH-------------HhHHHHHHHHHHHHhcCCCCEEE
Confidence 568899999999999988875 45555544332332 3322211 11223444566677899999999
Q ss_pred EECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH-H-HHHHHhhcCCCCCHHHHHHCCCCcc
Q 018834 136 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-H-LGEFLALTGAKLNGAEMMACGLATH 213 (350)
Q Consensus 136 ~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g-~-~a~~l~ltG~~l~a~eA~~~GLv~~ 213 (350)
+|-|.+.|||......||++++.+++.++ +.++-|++..|-+-.. . .+.. ...+++.++++.|+||.
T Consensus 265 VViGeGgSGGAlalg~aD~VlMle~A~ys-------VisPEgaAsILwkd~~~A~eAAe----alkitA~dL~~~GiID~ 333 (431)
T PLN03230 265 TVIGEGGSGGALAIGCGNRMLMMENAVYY-------VASPEACAAILWKSAAAAPKAAE----ALRITAAELVKLGVVDE 333 (431)
T ss_pred EEeCCCCcHHHHHhhcCCEEEEecCCEEE-------ecCHHHHHHHHhccccchHHHHH----HcCCCHHHHHhCCCCeE
Confidence 99999955554433468999999988665 4433444444433221 1 1333 33899999999999999
Q ss_pred ccCC
Q 018834 214 YSVS 217 (350)
Q Consensus 214 vv~~ 217 (350)
|+|.
T Consensus 334 II~E 337 (431)
T PLN03230 334 IVPE 337 (431)
T ss_pred eccC
Confidence 9985
No 122
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=97.92 E-value=0.0004 Score=71.36 Aligned_cols=139 Identities=12% Similarity=-0.006 Sum_probs=92.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834 55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (350)
Q Consensus 55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (350)
..+++++-++...+.++.++.. .+-+|-|-=++++++ |.+..+ ....+.+.+....+.....|+|
T Consensus 220 fG~~~peGyRKAlRlmkLAekf-gLPIVtLVDTpGA~p-G~~AEe-------------~Gq~~aIArnl~amasl~VP~I 284 (762)
T PLN03229 220 FGMPTPHGYRKALRMMYYADHH-GFPIVTFIDTPGAYA-DLKSEE-------------LGQGEAIAHNLRTMFGLKVPIV 284 (762)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCcCC-CchhHH-------------HhHHHHHHHHHHHHhCCCCCEE
Confidence 4577888899999998888775 455554443333332 322221 1123444556677788999999
Q ss_pred EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHHHHCCCCccc
Q 018834 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214 (350)
Q Consensus 135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA~~~GLv~~v 214 (350)
++|-|.|.|||......||++++.+++.|+ +.++-|++..|.+-.... .. +-....|+|+|++++|+||.|
T Consensus 285 SVViGeggSGGAlA~g~aD~VlMle~A~~s-------VisPEgaAsILwkd~~~A-~e-AAe~lkiTa~dL~~lGiiD~I 355 (762)
T PLN03229 285 SIVIGEGGSGGALAIGCANKLLMLENAVFY-------VASPEACAAILWKSAKAA-PK-AAEKLRITAQELCRLQIADGI 355 (762)
T ss_pred EEEeCCcchHHHHHhhcCCEEEEecCCeEE-------ecCHHHHHHHHhcCcccH-HH-HHHHcCCCHHHHHhCCCCeee
Confidence 999999988877666669999999987654 444444554444432211 11 233457899999999999999
Q ss_pred cCC
Q 018834 215 SVS 217 (350)
Q Consensus 215 v~~ 217 (350)
+|.
T Consensus 356 IpE 358 (762)
T PLN03229 356 IPE 358 (762)
T ss_pred ccC
Confidence 985
No 123
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=97.81 E-value=0.0033 Score=57.25 Aligned_cols=154 Identities=11% Similarity=0.039 Sum_probs=94.6
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHH-HcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAW-ENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (350)
Q Consensus 41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~-~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (350)
.|....|.=|+|.. .++.+-.....+.+... +.+.++-+|.|.=+ .+|-.|..- +.....+..
T Consensus 30 ~G~~V~vIa~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDt-pG~~~g~~a-------------E~~G~~~a~ 93 (238)
T TIGR03134 30 AGGKVTVIGVVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDT-PSQAYGRRE-------------ELLGINQAL 93 (238)
T ss_pred CCEEEEEEEECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeC-CCCCCCHHH-------------HHHHHHHHH
Confidence 34444455566653 78888888888888885 55577776666543 223333211 112222333
Q ss_pred HHHHHHHh---cCCCcEEEEECCccccccc-ccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH---HHH
Q 018834 120 YSFIYLLG---THLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL---GEF 192 (350)
Q Consensus 120 ~~l~~~i~---~~~kP~Ia~i~G~~~GgG~-~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~---a~~ 192 (350)
-++.+.+. ..+.|+|+.|-|.++|||+ .+.+.+|.++|.+++ .++..+.-|++..+.+-.... +..
T Consensus 94 A~l~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A-------~i~vm~~e~aa~I~~~~~~~~~e~a~~ 166 (238)
T TIGR03134 94 AHLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGA-------MVHVMDLESMARVTKRSVEELEALAKS 166 (238)
T ss_pred HHHHHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCc-------EEEecCHHHHHHHHccCHhHHHHHHHh
Confidence 34444444 5569999999999998876 465568887777655 455666666665555433322 222
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCC
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEK 219 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~ 219 (350)
+-. ...+...+.++|+||.++++.+
T Consensus 167 ~~~--~a~~~~~~~~~G~vd~vi~~~~ 191 (238)
T TIGR03134 167 SPV--FAPGIENFVKLGGVHALLDVAD 191 (238)
T ss_pred hhh--hccCHHHHHhCCCccEEeCCCC
Confidence 211 2346778999999999998765
No 124
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=97.74 E-value=0.00097 Score=61.83 Aligned_cols=150 Identities=12% Similarity=0.076 Sum_probs=92.0
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcC----CCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWEND----PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (350)
Q Consensus 44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d----~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (350)
|.++-.+..-..-++....-..+.++++.+..| ..+-+|.|.-+ .|+.+.+- . .....+ ...
T Consensus 61 v~v~a~D~t~~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dS-----gGaRlqEg-------~-~~L~~~-a~i 126 (274)
T TIGR03133 61 VVVAAQEGRFQGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLDT-----GGVRLQEA-------N-AGLIAI-AEI 126 (274)
T ss_pred EEEEEECCCccCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEcC-----CCcChhhh-------H-HHHHHH-HHH
Confidence 344444444456778888888899999888752 12345655433 33333221 1 011111 111
Q ss_pred HHHHHHHhcCCCcEEEEECCc--ccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH--H-HHHHh
Q 018834 120 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLA 194 (350)
Q Consensus 120 ~~l~~~i~~~~kP~Ia~i~G~--~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~--~-a~~l~ 194 (350)
+..+..+... .|+|+++-|. |.||+..++..||++|+++++.+++. +........|. . ..+-.
T Consensus 127 ~~~~~~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~a-----------GP~VIe~~~G~e~~~~~d~~ 194 (274)
T TIGR03133 127 MRAILDARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA 194 (274)
T ss_pred HHHHHHHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEecc-----------CHHHHHHhcCCCccCHHHhc
Confidence 2222334444 9999999999 89999999999999999988766541 11112222231 2 44555
Q ss_pred hcCCCCCHHHHHHCCCCccccCCCC
Q 018834 195 LTGAKLNGAEMMACGLATHYSVSEK 219 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~vv~~~~ 219 (350)
|..+.+.++.....|++|.+++++.
T Consensus 195 l~~~~lGG~~~~~sG~~D~~v~dd~ 219 (274)
T TIGR03133 195 LVWRTTGGKHRFLSGDADVLVEDDV 219 (274)
T ss_pred ccccccchHhHhhcccceEEeCCHH
Confidence 6666777788889999999998754
No 125
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.73 E-value=0.00049 Score=60.86 Aligned_cols=138 Identities=12% Similarity=0.019 Sum_probs=88.7
Q ss_pred CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834 58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (350)
Q Consensus 58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i 137 (350)
++.++..++...|..++.++..+-|.|.= =|.|||+..-. .+...|..++-||...+
T Consensus 34 i~~~~a~~ii~~Ll~l~~~~~~~~I~l~I----NSpGG~v~~g~-------------------aIyd~m~~~~~~V~t~~ 90 (196)
T PRK12551 34 VTSDSANRIVAQLLFLEAEDPEKDIYLYI----NSPGGSVYDGL-------------------GIFDTMQHVKPDVHTVC 90 (196)
T ss_pred ecHHHHHHHHHHHHHhhccCCCCCEEEEE----eCCCcchhhHH-------------------HHHHHHHhcCCCEEEEE
Confidence 88899999999999888644333332211 24455554211 12333556788999999
Q ss_pred CCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHH----HHhhccHHH--------------HHHHhhcC
Q 018834 138 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----YLSHLPGHL--------------GEFLALTG 197 (350)
Q Consensus 138 ~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~----~L~rl~g~~--------------a~~l~ltG 197 (350)
.|.|.+.|.-|.+++|- |++.+++++-+-...-|..-...-.. .+-+..... -..++-..
T Consensus 91 ~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~~rd 170 (196)
T PRK12551 91 VGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDRD 170 (196)
T ss_pred EEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcC
Confidence 99999999999999884 88999998887766433221111111 111111111 12334445
Q ss_pred CCCCHHHHHHCCCCccccCCC
Q 018834 198 AKLNGAEMMACGLATHYSVSE 218 (350)
Q Consensus 198 ~~l~a~eA~~~GLv~~vv~~~ 218 (350)
..++|+||+++||+|+|++..
T Consensus 171 ~~msa~EA~eyGliD~I~~~~ 191 (196)
T PRK12551 171 FFMSPSEAVEYGLIDLVIDKR 191 (196)
T ss_pred cCCCHHHHHHcCCCcEEeccC
Confidence 679999999999999998764
No 126
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.66 E-value=0.00072 Score=60.82 Aligned_cols=135 Identities=11% Similarity=0.076 Sum_probs=87.3
Q ss_pred CCCHHHHHHHHHHHHHHHcCC---CceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcE
Q 018834 57 ALNTNMGAKLNKLFKAWENDP---NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH 133 (350)
Q Consensus 57 al~~~m~~~L~~~l~~~~~d~---~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~ 133 (350)
.+|..+.+.+...|..++..+ .+. |.|-+ .||++..-. .+...+...+-||
T Consensus 62 ~Idd~~a~~i~aqLl~L~~~~~~~~I~-lyINS------pGGsv~aGl-------------------aIyd~m~~~~~~V 115 (221)
T PRK14514 62 QIDDYTANTIQAQLLYLDSVDPGKDIS-IYINS------PGGSVYAGL-------------------GIYDTMQFISSDV 115 (221)
T ss_pred EEcHHHHHHHHHHHHHHhccCCCCCEE-EEEEC------CCcchhhHH-------------------HHHHHHHhcCCCE
Confidence 478888888888777776432 333 33344 445443211 1223355678899
Q ss_pred EEEECCcccccccccccccCE--EEEeCCeeEecccccccccCCCchH----HHHhh-----------ccHH---HHHHH
Q 018834 134 VAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGAS----FYLSH-----------LPGH---LGEFL 193 (350)
Q Consensus 134 Ia~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s----~~L~r-----------l~g~---~a~~l 193 (350)
.+.+.|.|.+.|.-|.+++|. |++.+++++-+-...-|......-. .-+-+ ..|. .-..+
T Consensus 116 ~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~ 195 (221)
T PRK14514 116 ATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWAD 195 (221)
T ss_pred EEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 999999999999999999996 9999999988777654432221100 01111 1121 12334
Q ss_pred hhcCCCCCHHHHHHCCCCccccCC
Q 018834 194 ALTGAKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 194 ~ltG~~l~a~eA~~~GLv~~vv~~ 217 (350)
+-....++|+||+++||||+|+..
T Consensus 196 ~~rd~wmtA~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 196 SDRDYWMTAQEAKEYGMIDEVLIK 219 (221)
T ss_pred hhcCccCCHHHHHHcCCccEEeec
Confidence 555678999999999999999864
No 127
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.60 E-value=0.00098 Score=59.13 Aligned_cols=136 Identities=15% Similarity=0.179 Sum_probs=90.2
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCce--EEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834 57 ALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV 134 (350)
Q Consensus 57 al~~~m~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I 134 (350)
.++.++...+...|..++.++.-+ .|.|- |.|||+..-. .+...|...+-||.
T Consensus 35 ~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~IN------SpGG~v~~Gl-------------------aIyd~m~~~~~~V~ 89 (201)
T PRK14513 35 PIESQMANTIVAQLLLLDSQNPEQEIQMYIN------CPGGEVYAGL-------------------AIYDTMRYIKAPVS 89 (201)
T ss_pred EEcHHHHHHHHHHHHHhhccCCCCCEEEEEE------CCCCchhhHH-------------------HHHHHHHhcCCCEE
Confidence 478889999988888877643222 23333 4556654311 13334556788999
Q ss_pred EEECCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHHHHh------hccHHH-HHH-------------
Q 018834 135 AILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFYLS------HLPGHL-GEF------------- 192 (350)
Q Consensus 135 a~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~~L~------rl~g~~-a~~------------- 192 (350)
..+.|.|.+.|.-|.+++|- |++.+++++-+.....|+. +-++...- +.-... ..|
T Consensus 90 Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~I~~ 167 (201)
T PRK14513 90 TICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEKLLR 167 (201)
T ss_pred EEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 99999999999999999995 9999999998877765541 11222111 110111 222
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCC
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEK 219 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~ 219 (350)
++-....++|+||+++||||+|+++..
T Consensus 168 ~~~rd~~msa~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 168 DMERDYFMSPEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred HhccCcccCHHHHHHcCCCcEEeccCC
Confidence 333456789999999999999997644
No 128
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=97.56 E-value=0.00096 Score=68.74 Aligned_cols=85 Identities=13% Similarity=-0.058 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Q 018834 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (350)
Q Consensus 61 ~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~ 140 (350)
..+.++.+.++.+..|+.|++|||.-.+ +.|+++..+. .+++.+..+....|||||..+++
T Consensus 76 ~~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~~----------------ei~~ai~~fk~sgKpVvA~~~~~ 136 (584)
T TIGR00705 76 ISLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHLV----------------EIGSALSEFKDSGKPVYAYGTNY 136 (584)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHHH----------------HHHHHHHHHHhcCCeEEEEEccc
Confidence 3567899999999999999999998652 2244433221 12223333445689999999887
Q ss_pred ccccccccccccCEEEEeCCeeEec
Q 018834 141 TMGGGAGVSIPGTFRVACGKTVFAT 165 (350)
Q Consensus 141 ~~GgG~~Lal~~D~riate~a~f~~ 165 (350)
+ -||.-|+.+||-+++.+.+.++.
T Consensus 137 ~-s~~YylAs~AD~I~~~p~G~v~~ 160 (584)
T TIGR00705 137 S-QGQYYLASFADEIILNPMGSVDL 160 (584)
T ss_pred c-chhhhhhhhCCEEEECCCceEEe
Confidence 5 67899999999999999876644
No 129
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=97.50 E-value=0.0014 Score=61.51 Aligned_cols=150 Identities=14% Similarity=0.131 Sum_probs=89.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCC----CceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDP----NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (350)
Q Consensus 44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~----~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (350)
|.++-.+..=..-++....-..+..+++.+..+. -+-+|+|.-+| |+.+.+- . .....+ ...
T Consensus 70 v~v~a~D~tf~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSG-----GaRlqEg-------~-~~L~~~-a~i 135 (301)
T PRK07189 70 VVVAAQEGRFMGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFETG-----GVRLQEA-------N-AGLAAI-AEI 135 (301)
T ss_pred EEEEEECCCccCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCC-----CcCccch-------H-HHHHHH-HHH
Confidence 4444455444677888888999999999887764 15566655433 3333221 0 001111 111
Q ss_pred HHHHHHHhcCCCcEEEEECCc--ccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH--HH-HHHHh
Q 018834 120 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HL-GEFLA 194 (350)
Q Consensus 120 ~~l~~~i~~~~kP~Ia~i~G~--~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g--~~-a~~l~ 194 (350)
+..+..+... .|+|+++-|. |+||+..++..||++|+++++.+++. +....-...| .. ..+..
T Consensus 136 ~~~~~~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igla-----------GP~VIe~~~G~e~~d~~d~~ 203 (301)
T PRK07189 136 MRAIVDLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA 203 (301)
T ss_pred HHHHHHHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEecc-----------CHHHHHHhcCCcccCHHHhc
Confidence 2222334444 9999999999 99999999999999999998766541 1111111122 11 33334
Q ss_pred hcCCCCCHHHHHHCCCCccccCCCC
Q 018834 195 LTGAKLNGAEMMACGLATHYSVSEK 219 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~vv~~~~ 219 (350)
+..+.+.+......|.+|.+++++.
T Consensus 204 ~vw~~lGG~h~~~sG~~D~~v~dd~ 228 (301)
T PRK07189 204 LVWRTTGGKHRYLSGLADALVDDDV 228 (301)
T ss_pred ccccccCcceeeecccceEEeCCHH
Confidence 4334444455667999999998764
No 130
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=97.49 E-value=0.00053 Score=62.84 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=75.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (350)
Q Consensus 56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia 135 (350)
+-++.+....+.++++....+..+-.+ | -+-||++..- +++...|.+++.|+++
T Consensus 70 ~~I~i~dse~v~raI~~~~~~~~IdLi-i------~TpGG~v~AA-------------------~~I~~~l~~~~~~v~v 123 (285)
T PF01972_consen 70 RYIDIDDSEFVLRAIREAPKDKPIDLI-I------HTPGGLVDAA-------------------EQIARALREHPAKVTV 123 (285)
T ss_pred eeEcHhhHHHHHHHHHhcCCCCceEEE-E------ECCCCcHHHH-------------------HHHHHHHHhCCCCEEE
Confidence 568889999999999888777655444 4 3456665421 2345557788999999
Q ss_pred EECCcccccccccccccCEEEEeCCeeEecccccccccCC
Q 018834 136 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD 175 (350)
Q Consensus 136 ~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~ 175 (350)
.|...|+.+|.-++++||-+++.+++.++--+..+|-+|.
T Consensus 124 ~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA 163 (285)
T PF01972_consen 124 IVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPA 163 (285)
T ss_pred EECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCCh
Confidence 9999999999999999999999999999999999998774
No 131
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=97.41 E-value=0.005 Score=57.79 Aligned_cols=153 Identities=14% Similarity=0.111 Sum_probs=94.8
Q ss_pred EeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHH
Q 018834 40 GKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT 118 (350)
Q Consensus 40 ~~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 118 (350)
.+|.-..|.-|.+. ...+++....+.+.++++.+... .+-+|.|.-+| |+.+.+ +. ..... ...
T Consensus 118 I~G~~V~v~a~D~~f~gGS~g~~~~eKi~r~~e~A~~~-~lPlV~l~dsg-----GarmqE-------gi-~sL~~-~ak 182 (292)
T PRK05654 118 IEGMPVVLAVMDFSFMGGSMGSVVGEKIVRAVERAIEE-KCPLVIFSASG-----GARMQE-------GL-LSLMQ-MAK 182 (292)
T ss_pred ECCEEEEEEEEecccccCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----Ccchhh-------hh-hHHHh-HHH
Confidence 44554445555555 67889999999999999988776 57777776544 322211 11 11111 122
Q ss_pred HHHHHHHHhcCCCcEEEEECCcccccccc-cccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhc
Q 018834 119 LYSFIYLLGTHLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALT 196 (350)
Q Consensus 119 ~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~-Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~lt 196 (350)
....+.++.....|.|+++-|.|.||+.. .++.+|++|+.+++.+++--. |.+... +..+ .
T Consensus 183 ~~~a~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGp---------------rvie~~~~e~l--p 245 (292)
T PRK05654 183 TSAALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGP---------------RVIEQTVREKL--P 245 (292)
T ss_pred HHHHHHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCH---------------HHHHhhhhhhh--h
Confidence 22334445667899999999999999764 577799999988876554211 111111 1111 1
Q ss_pred CCCCCHHHHHHCCCCccccCCCChHHHH
Q 018834 197 GAKLNGAEMMACGLATHYSVSEKLPLIE 224 (350)
Q Consensus 197 G~~l~a~eA~~~GLv~~vv~~~~l~~~~ 224 (350)
-..-+++-+.+.|+||.|+++.++....
T Consensus 246 e~~~~ae~~~~~G~vD~Vv~~~e~r~~l 273 (292)
T PRK05654 246 EGFQRAEFLLEHGAIDMIVHRRELRDTL 273 (292)
T ss_pred hhhcCHHHHHhCCCCcEEECHHHHHHHH
Confidence 1112455567899999999998876543
No 132
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=97.23 E-value=0.00037 Score=59.28 Aligned_cols=99 Identities=17% Similarity=0.101 Sum_probs=60.9
Q ss_pred hcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccc------------cccc---------cCCCc-----hH-
Q 018834 127 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGF---------HPDAG-----AS- 179 (350)
Q Consensus 127 ~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~------------~iGl---------~P~~G-----~s- 179 (350)
....|||||.++|.+..+|.-|+.+||-+++++.+.++..-+ ++|+ +.+.+ .+
T Consensus 3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~ 82 (154)
T PF01343_consen 3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE 82 (154)
T ss_dssp HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence 357899999999999999999999999999999886665322 1232 22222 00
Q ss_pred ---HHHhhccH-----------------HHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHH
Q 018834 180 ---FYLSHLPG-----------------HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG 228 (350)
Q Consensus 180 ---~~L~rl~g-----------------~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~ 228 (350)
..+.+++. .....-++.|..++|++|++.||||.+-. ++++.+.+.
T Consensus 83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~---~~~~~~~l~ 148 (154)
T PF01343_consen 83 EERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGT---FDEAIARLA 148 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETS---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCC---HHHHHHHHH
Confidence 11111111 01112357899999999999999999954 455555544
No 133
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.19 E-value=0.003 Score=55.61 Aligned_cols=141 Identities=15% Similarity=0.065 Sum_probs=85.3
Q ss_pred EEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceE--EEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834 47 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF--VSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (350)
Q Consensus 47 ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~--vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (350)
|.|..| ++..+...+...+..++.++..+- +.|-+.|+...+|. .+..
T Consensus 30 I~l~g~-----I~~~~a~~i~aqll~Lea~~~~k~I~lyINSpGG~V~aG~-------------------------AIyd 79 (200)
T COG0740 30 IFLGGE-----IEDHMANLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGL-------------------------AIYD 79 (200)
T ss_pred EEEeee-----echHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCcccchhH-------------------------HHHH
Confidence 555544 444566666666666665544443 34444444444431 1223
Q ss_pred HHhcCCCcEEEEECCcccccccccccccCEE--EEeCCeeEecccccccccCCCchHHHHh--h----c-----------
Q 018834 125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFR--VACGKTVFATPETLIGFHPDAGASFYLS--H----L----------- 185 (350)
Q Consensus 125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~r--iate~a~f~~Pe~~iGl~P~~G~s~~L~--r----l----------- 185 (350)
.+...++||...+.|.+..-|.-|+++++.. ++.+++++-+.... |.+-+. ++-+.- + +
T Consensus 80 tm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~-a~Di~i~A~ei~~~~~~l~~i~a~~ 157 (200)
T COG0740 80 TMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQ-ASDIEIHAREILKIKERLNRIYAEH 157 (200)
T ss_pred HHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccC-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556799999999999999999999998875 88888877665554 322221 111110 0 0
Q ss_pred cHHH---HHHHhhcCCCCCHHHHHHCCCCccccCCCC
Q 018834 186 PGHL---GEFLALTGAKLNGAEMMACGLATHYSVSEK 219 (350)
Q Consensus 186 ~g~~---a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~ 219 (350)
.|.. -....=....++|+||+++||+|+|+...+
T Consensus 158 TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~ 194 (200)
T COG0740 158 TGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESRE 194 (200)
T ss_pred cCCCHHHHHHhhcccccCCHHHHHHcCCcceeccccc
Confidence 0100 122333466789999999999999987654
No 134
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=97.12 E-value=0.0082 Score=53.98 Aligned_cols=140 Identities=17% Similarity=0.141 Sum_probs=89.4
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCce--EEEEEcCCCccccC---CChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCC
Q 018834 57 ALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAG---GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK 131 (350)
Q Consensus 57 al~~~m~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG---~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~k 131 (350)
.++.++.+.+...|-.++.++..+ -+.|-|.|....+| +++.+ ...+...+...+-
T Consensus 48 ~~~~~~a~~iiaqLl~L~~~~~~k~I~lyINSpGGsv~~G~~iG~v~~-------------------glaIyD~m~~ik~ 108 (222)
T PRK12552 48 QVGMDVTELIIAQLLYLEFDDPEKPIYFYINSTGTSWYTGDAIGFETE-------------------AFAICDTMRYIKP 108 (222)
T ss_pred chhHhHHHHHHHHHHHHhccCCCCCEEEEEeCCCCCcccccccccccc-------------------HHHHHHHHHhcCC
Confidence 445568889888888876644322 35556666555555 22211 1112233445677
Q ss_pred cEEEEECCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHHH------HhhccHHH-HHHHhhcC-----
Q 018834 132 PHVAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFY------LSHLPGHL-GEFLALTG----- 197 (350)
Q Consensus 132 P~Ia~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~~------L~rl~g~~-a~~l~ltG----- 197 (350)
||...+.|.|.+.|.-|.+++|- |++.+++++-+.....|.. +-++-+ |-++-... ..|.--||
T Consensus 109 ~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~--G~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~ 186 (222)
T PRK12552 109 PVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR--GQATDIQIRAKEVLHNKRTMLEILSRNTGQTVEK 186 (222)
T ss_pred CeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc--cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Confidence 89999999999999999999985 9999999988877655542 112211 11111111 22333344
Q ss_pred --------CCCCHHHHHHCCCCccccCC
Q 018834 198 --------AKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 198 --------~~l~a~eA~~~GLv~~vv~~ 217 (350)
..++|+||+++||||+|+.+
T Consensus 187 I~~d~~rd~wmsA~EA~eyGliD~Ii~~ 214 (222)
T PRK12552 187 LSKDTDRMFYLTPQEAKEYGLIDRVLES 214 (222)
T ss_pred HHHHhcCCCcCCHHHHHHcCCCcEEecc
Confidence 56899999999999999865
No 135
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.11 E-value=0.017 Score=53.98 Aligned_cols=154 Identities=12% Similarity=0.095 Sum_probs=93.4
Q ss_pred EeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHH
Q 018834 40 GKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT 118 (350)
Q Consensus 40 ~~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 118 (350)
.+|.-..|.-|.+. ..-+++....+.+.++++.+... .+-+|.+..+|++ -+. ++. .....+ ..
T Consensus 117 I~G~~V~v~a~D~~f~gGSmg~~~geKi~r~~e~A~~~-~lPlV~l~dSgGa-----Rmq-------Eg~-~sL~~~-ak 181 (285)
T TIGR00515 117 LYGMPIVVAVFDFAFMGGSMGSVVGEKFVRAIEKALED-NCPLIIFSASGGA-----RMQ-------EAL-LSLMQM-AK 181 (285)
T ss_pred ECCEEEEEEEEeccccCCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCc-----ccc-------cch-hHHHhH-HH
Confidence 34443334444444 66889999999999999988765 5777777655433 121 111 111111 22
Q ss_pred HHHHHHHHhcCCCcEEEEECCcccccccc-cccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcC
Q 018834 119 LYSFIYLLGTHLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTG 197 (350)
Q Consensus 119 ~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~-Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG 197 (350)
....+.++.....|+|+++-|.|.||+.. .++.+|++|+.+++.+++--.+ .+.... +.. +.-
T Consensus 182 ~~~~~~~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti---~e~--lpe 245 (285)
T TIGR00515 182 TSAALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTV---REK--LPE 245 (285)
T ss_pred HHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHh---cCc--cch
Confidence 22234445667899999999999999765 5579999999998866652221 111111 111 111
Q ss_pred CCCCHHHHHHCCCCccccCCCChHHHH
Q 018834 198 AKLNGAEMMACGLATHYSVSEKLPLIE 224 (350)
Q Consensus 198 ~~l~a~eA~~~GLv~~vv~~~~l~~~~ 224 (350)
.--+++-+.+.|+||.+|++.++....
T Consensus 246 ~~q~ae~~~~~G~vD~iv~~~~~r~~l 272 (285)
T TIGR00515 246 GFQTSEFLLEHGAIDMIVHRPEMKKTL 272 (285)
T ss_pred hcCCHHHHHhCCCCcEEECcHHHHHHH
Confidence 112445577889999999998876543
No 136
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=97.04 E-value=0.026 Score=57.24 Aligned_cols=159 Identities=17% Similarity=0.146 Sum_probs=98.4
Q ss_pred CCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834 42 ANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (350)
Q Consensus 42 ~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (350)
|....|.=|+|. ...+++.+..+...+.++.+... ++-+|.|.-.+. |..|-+- +....++..-
T Consensus 314 G~~V~vvAnd~~~~~G~~~~~~~~K~~r~i~~a~~~-~lPlV~lvDs~G-~~~g~~~-------------E~~g~~~~~a 378 (512)
T TIGR01117 314 GQSVGIIANQPKVMAGCLDIDSSDKIARFIRFCDAF-NIPIVTFVDVPG-FLPGVNQ-------------EYGGIIRHGA 378 (512)
T ss_pred CEEEEEEEeccccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCcC-ccccHHH-------------HHHHHHHHHH
Confidence 333344445554 34569999999999999988764 566666654433 5444321 1122344555
Q ss_pred HHHHHHhcCCCcEEEEECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhhc-c----H-HHH
Q 018834 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P----G-HLG 190 (350)
Q Consensus 121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-~----g-~~a 190 (350)
+++..+.....|.|++|-|.+.|||..-. +.+|++++.+++.++ +.+.-++...+.+- . . ..+
T Consensus 379 ~~~~a~~~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~-------v~~pe~a~~i~~~~~l~~~~~~~~~ 451 (512)
T TIGR01117 379 KVLYAYSEATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIA-------VMGPAGAANIIFRKDIKEAKDPAAT 451 (512)
T ss_pred HHHHHHHhCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEe-------ecCHHHHHHHHhhhhcccccCHHHH
Confidence 67788888999999999999988865322 238888888776554 44333333333221 0 0 001
Q ss_pred --HHH-hhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834 191 --EFL-ALTGAKLNGAEMMACGLATHYSVSEKLPL 222 (350)
Q Consensus 191 --~~l-~ltG~~l~a~eA~~~GLv~~vv~~~~l~~ 222 (350)
..+ -..-+..++..+...|+||.|+++.+...
T Consensus 452 ~~~~~~~~~~~~~~~~~~a~~g~vD~VI~P~~tR~ 486 (512)
T TIGR01117 452 RKQKIAEYREEFANPYKAAARGYVDDVIEPKQTRP 486 (512)
T ss_pred HHHHHHHHHHhhcCHHHHHhcCCCCeeEChHHHHH
Confidence 000 11122447888999999999999988764
No 137
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=96.90 E-value=0.038 Score=51.71 Aligned_cols=148 Identities=16% Similarity=0.191 Sum_probs=88.1
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (350)
Q Consensus 44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (350)
|.++-.+-.=..-++....-+.+.++++.+... .+-+|++..+| |+.+.+ +. .....+.+. ...+
T Consensus 135 v~v~a~Dftf~gGSmG~v~geKi~ra~e~A~~~-rlPlV~l~~SG-----GARmQE-------g~-~sL~qmak~-saa~ 199 (296)
T CHL00174 135 VALGVMDFQFMGGSMGSVVGEKITRLIEYATNE-SLPLIIVCASG-----GARMQE-------GS-LSLMQMAKI-SSAL 199 (296)
T ss_pred EEEEEECCcccccCcCHHHHHHHHHHHHHHHHc-CCCEEEEECCC-----Cccccc-------cc-hhhhhhHHH-HHHH
Confidence 344444433366788888999999999888765 46677776543 333322 11 011111111 0111
Q ss_pred HH-HhcCCCcEEEEECCccccccccc-ccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCC-
Q 018834 124 YL-LGTHLKPHVAILNGVTMGGGAGV-SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKL- 200 (350)
Q Consensus 124 ~~-i~~~~kP~Ia~i~G~~~GgG~~L-al~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l- 200 (350)
.. ...-..|+|+++.|+|.||+... ++.||++|+.+++.+++.- ||++-. .+|+.+
T Consensus 200 ~~~~~~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAG---------------PrVIe~------t~ge~lp 258 (296)
T CHL00174 200 YDYQSNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG---------------KRVIEQ------TLNKTVP 258 (296)
T ss_pred HHHHHcCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeC---------------HHHHHH------hcCCcCC
Confidence 12 22456999999999999998765 6679999997777554321 111111 222222
Q ss_pred ----CHHHHHHCCCCccccCCCChHHHHHHH
Q 018834 201 ----NGAEMMACGLATHYSVSEKLPLIEEEL 227 (350)
Q Consensus 201 ----~a~eA~~~GLv~~vv~~~~l~~~~~~l 227 (350)
+++-.++.|+||.+|+..++.+....+
T Consensus 259 e~fq~ae~l~~~G~vD~iV~r~~lr~~l~~l 289 (296)
T CHL00174 259 EGSQAAEYLFDKGLFDLIVPRNLLKGVLSEL 289 (296)
T ss_pred cccccHHHHHhCcCceEEEcHHHHHHHHHHH
Confidence 355577899999999987776544433
No 138
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=96.84 E-value=0.023 Score=57.55 Aligned_cols=138 Identities=14% Similarity=0.213 Sum_probs=90.8
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCC--ChhhHHHhhhcCChHHHHHHHHHHHHH
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG--DIVSLYHFMNQGKLEECKDFFRTLYSF 122 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~--Dl~~~~~~~~~~~~~~~~~~~~~~~~l 122 (350)
.++-.+.--...+++......+.++++.+..+ .+-+|.|.- |+|+ ++.+-.. ....+ .....-
T Consensus 60 ~v~a~D~t~~gGs~g~~~~~Ki~ra~~~A~~~-~~P~v~l~d-----sgGa~~r~~eg~~--------~l~~~-g~i~~~ 124 (493)
T PF01039_consen 60 VVIAQDFTVLGGSVGEVHGEKIARAIELALEN-GLPLVYLVD-----SGGAFLRMQEGVE--------SLMGM-GRIFRA 124 (493)
T ss_dssp EEEEEETTSGGGTBSHHHHHHHHHHHHHHHHH-TEEEEEEEE-----ESSBCGGGGGHHH--------HHHHH-HHHHHH
T ss_pred EEEEeccceecCCCCcccceeeehHHHHHHHc-CCCcEEecc-----ccccccccchhhh--------hhhhh-HHHHHH
Confidence 33344444467889999999999999998876 455665543 4455 4433221 11112 122223
Q ss_pred HHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCC
Q 018834 123 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLN 201 (350)
Q Consensus 123 ~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~ 201 (350)
...+.. ..|+|+++.|.|.|||..++..||++|++++ +.+. + .| |++ .. ..+|+.++
T Consensus 125 ~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~-------l---~G-----P~v-----v~-~~~Ge~~~ 182 (493)
T PF01039_consen 125 IARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIF-------L---AG-----PRV-----VE-SATGEEVD 182 (493)
T ss_dssp HHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEE-------S---ST-----HHH-----HH-HHHSSCTS
T ss_pred HHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEE-------e---cc-----ccc-----cc-cccCcccc
Confidence 344555 9999999999999999999999999999987 6554 3 11 111 11 35678888
Q ss_pred HHHH-------HHCCCCccccCCCC
Q 018834 202 GAEM-------MACGLATHYSVSEK 219 (350)
Q Consensus 202 a~eA-------~~~GLv~~vv~~~~ 219 (350)
.++. ...|.+|.++++++
T Consensus 183 ~~~lgG~~~h~~~sG~~d~v~~de~ 207 (493)
T PF01039_consen 183 SEELGGADVHAAKSGVVDYVVDDEE 207 (493)
T ss_dssp HHHHHBHHHHHHTSSSSSEEESSHH
T ss_pred chhhhhhhhhcccCCCceEEEechH
Confidence 7764 46899999998764
No 139
>PRK10949 protease 4; Provisional
Probab=96.76 E-value=0.0093 Score=61.75 Aligned_cols=85 Identities=15% Similarity=0.045 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Q 018834 61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140 (350)
Q Consensus 61 ~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~ 140 (350)
-.+.++.++++.+..||.|++|||.-.+- .|..+..+ +.+++.+..+....|||||..+.+
T Consensus 95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~~----------------~eI~~ai~~fk~sGKpVvA~~~~~ 155 (618)
T PRK10949 95 NSLFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPSM----------------QYIGKALREFRDSGKPVYAVGDSY 155 (618)
T ss_pred ccHHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHHH----------------HHHHHHHHHHHHhCCeEEEEecCc
Confidence 34568999999999999999999987531 12222111 112223333445689999975555
Q ss_pred ccccccccccccCEEEEeCCeeEec
Q 018834 141 TMGGGAGVSIPGTFRVACGKTVFAT 165 (350)
Q Consensus 141 ~~GgG~~Lal~~D~riate~a~f~~ 165 (350)
+ -++.-|+.+||-+++.+.+.++.
T Consensus 156 ~-s~~YyLASaAD~I~l~P~G~v~~ 179 (618)
T PRK10949 156 S-QGQYYLASFANKIYLSPQGVVDL 179 (618)
T ss_pred c-chhhhhhhhCCEEEECCCceEEE
Confidence 4 56889999999999999776653
No 140
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=96.22 E-value=0.11 Score=53.24 Aligned_cols=146 Identities=17% Similarity=0.187 Sum_probs=88.1
Q ss_pred eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834 41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (350)
Q Consensus 41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (350)
+|.-..|.-|.+. +..+++....+.+.++++.+.+. .+-+|.|.-+|.++-.+ ....+ .....+ ...
T Consensus 127 ~Gr~V~v~a~D~tv~GGs~g~~~~~Ki~r~~elA~~~-~lPlV~l~DSgGarl~~-q~e~~---------~~~~~~-g~i 194 (569)
T PLN02820 127 HGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQC-RLPCIYLVDSGGANLPR-QAEVF---------PDRDHF-GRI 194 (569)
T ss_pred CCEEEEEEEECCCccCCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcCCcc-ccccc---------chHhHH-HHH
Confidence 3443334444444 67889999999999999988775 46666665443332111 00001 000111 111
Q ss_pred HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHHHHHHhhcCC
Q 018834 120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA 198 (350)
Q Consensus 120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~ 198 (350)
+.....+.....|+|+++-|.|.|||..+...||++|+++. +.+. + .| |+++. ..||+
T Consensus 195 f~~~~~ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~-------~---aG-----P~vV~------~~~Ge 253 (569)
T PLN02820 195 FYNQARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIF-------L---AG-----PPLVK------AATGE 253 (569)
T ss_pred HHHHHHHhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEE-------e---cC-----HHHHH------hhcCc
Confidence 22223355667999999999999999999999999999874 4333 2 11 11111 25566
Q ss_pred CCCHHHH-----H--HCCCCccccCCCC
Q 018834 199 KLNGAEM-----M--ACGLATHYSVSEK 219 (350)
Q Consensus 199 ~l~a~eA-----~--~~GLv~~vv~~~~ 219 (350)
.++++|. . ..|.+|.++++|.
T Consensus 254 ~v~~eeLGGa~~h~~~sGv~d~~~~de~ 281 (569)
T PLN02820 254 EVSAEDLGGADVHCKVSGVSDHFAQDEL 281 (569)
T ss_pred ccCHHHhCCHHHhcccccccccccCchH
Confidence 6666665 2 4799988887764
No 141
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=96.15 E-value=0.12 Score=50.78 Aligned_cols=148 Identities=10% Similarity=0.151 Sum_probs=103.3
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834 41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (350)
Q Consensus 41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (350)
++.|.+|.++ +.+++.+.+.+.+.++.++++. ..+|||.=+ ..+. +.....
T Consensus 25 ~~~v~vi~i~-----g~I~~~s~~~l~r~l~~A~~~~-a~~vvl~ld-----------------TPGG------l~~sm~ 75 (436)
T COG1030 25 EKKVYVIEID-----GAIDPASADYLQRALQSAEEEN-AAAVVLELD-----------------TPGG------LLDSMR 75 (436)
T ss_pred CCeEEEEEec-----CccCHHHHHHHHHHHHHHHhCC-CcEEEEEec-----------------CCCc------hHHHHH
Confidence 4567888885 5699999999999999998865 334444311 0111 123345
Q ss_pred HHHHHHhcCCCcEEEEEC---CcccccccccccccCEEEEeCCeeEecccccccc--cCC-Cc-hHHHHhhcc------H
Q 018834 121 SFIYLLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF--HPD-AG-ASFYLSHLP------G 187 (350)
Q Consensus 121 ~l~~~i~~~~kP~Ia~i~---G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl--~P~-~G-~s~~L~rl~------g 187 (350)
++...|.+.+.||+..+. +.|...|.-++++||+..+.+.+.++--..-.+- .++ .. .++.+..+. |
T Consensus 76 ~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~g 155 (436)
T COG1030 76 QIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEERG 155 (436)
T ss_pred HHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHcC
Confidence 678889999999888884 4799999999999999999998887754432222 111 11 223333222 2
Q ss_pred ---HHHHHHhhcCCCCCHHHHHHCCCCccccCC
Q 018834 188 ---HLGEFLALTGAKLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 188 ---~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~ 217 (350)
..+..++.....++++||++.|++|-+..+
T Consensus 156 RN~~~ae~~v~~~~~l~a~eA~~~~vid~iA~~ 188 (436)
T COG1030 156 RNPTWAERFVTENLSLTAEEALRQGVIDLIARD 188 (436)
T ss_pred CChHHHHHHhhhccCCChhHHHhcCccccccCC
Confidence 226788899999999999999999987643
No 142
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=96.13 E-value=0.11 Score=52.91 Aligned_cols=142 Identities=16% Similarity=0.228 Sum_probs=83.7
Q ss_pred eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834 41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL 119 (350)
Q Consensus 41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 119 (350)
+|.-..|.-+... ..-+++....+.+.++++.+.++. +-+|.|.-+| |+.+.+=. .....+-+..
T Consensus 80 ~Gr~v~v~a~D~t~~gGS~g~~~~~K~~r~~e~A~~~~-lPlV~l~dSg-----Garm~eg~--------~~l~~~~~~~ 145 (512)
T TIGR01117 80 DGRLVYAFAQDFTVMGGSLGEMHAAKIVKIMDLAMKMG-APVVGLNDSG-----GARIQEAV--------DALKGYGDIF 145 (512)
T ss_pred CCEEEEEEEECCcccccCCCHHHHHHHHHHHHHHHHcC-CCEEEEecCC-----CCCccccc--------hhhhhHHHHH
Confidence 3433334444433 567888889999999999887764 5566555432 33332100 0001111111
Q ss_pred HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCe-eEecccccccccCCCchHHHHhhccHHHHHHHhhcCC
Q 018834 120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT-VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA 198 (350)
Q Consensus 120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a-~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~ 198 (350)
+.. .. ..-..|+|+++.|.|.||+......||++|+++++ .+. + .| |+++. ..||+
T Consensus 146 ~~~-~~-~s~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~-------~---aG-----P~vv~------~~~Ge 202 (512)
T TIGR01117 146 YRN-TI-ASGVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMF-------I---TG-----PQVIK------TVTGE 202 (512)
T ss_pred HHH-HH-HcCCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEE-------e---cC-----hHHHH------hhcCc
Confidence 111 11 23358999999999999998887799999999864 233 2 11 11111 14566
Q ss_pred CCCHHHH-------HHCCCCccccCCCC
Q 018834 199 KLNGAEM-------MACGLATHYSVSEK 219 (350)
Q Consensus 199 ~l~a~eA-------~~~GLv~~vv~~~~ 219 (350)
.++++|. ...|.+|.+++++.
T Consensus 203 ~v~~e~lGGa~~h~~~sGv~d~~~~de~ 230 (512)
T TIGR01117 203 EVTAEQLGGAMAHNSVSGVAHFIAEDDD 230 (512)
T ss_pred ccchhhcchHHHhccccceeEEecCChH
Confidence 6666555 25899999987754
No 143
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=96.12 E-value=0.054 Score=54.43 Aligned_cols=196 Identities=13% Similarity=0.112 Sum_probs=107.9
Q ss_pred EEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHh
Q 018834 48 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 127 (350)
Q Consensus 48 tLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 127 (350)
-=+.+.+.-++..-....+.++.+.+..+-.-.+.+..|. |+.+.+=. ..... +...+.-+.+++
T Consensus 97 a~D~TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l~dsg------Gari~~~v--------~~l~g-~g~iF~~~a~~S 161 (526)
T COG4799 97 ANDFTVKGGTLGEMTAKKILRAQELAIENGLPVIGLNDSG------GARIQEGV--------PSLAG-YGRIFYRNARAS 161 (526)
T ss_pred EecCceecccccccccchHHHHHHHHHHcCCCEEEEEccc------ccccccCc--------ccccc-chHHHHHHHHhc
Confidence 3345557788888888888888888877644444454443 33332211 01111 122222234455
Q ss_pred cCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHH--
Q 018834 128 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM-- 205 (350)
Q Consensus 128 ~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA-- 205 (350)
.. .|.|++|-|.|.|||+-+...||+.|+.+++ ..+.+ .|..... ..||+.++++|.
T Consensus 162 g~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~------~~mfl-------------tGP~~ik-~vtGe~V~~e~LGG 220 (526)
T COG4799 162 GV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ------SYMFL-------------TGPPVIK-AVTGEEVSAEELGG 220 (526)
T ss_pred cC-CCEEEEEEecCcccccccccccceEEEEcCC------ccEEe-------------eCHHHHH-hhcCcEeehhhccc
Confidence 55 9999999999999999999999999999985 11112 1111111 256666666653
Q ss_pred -----HHCCCCccccCCCC--hHHHHHHHHHhccCCH---HH------HHHHHHHHhccCCCCcchHHHHHHHHHHhcCc
Q 018834 206 -----MACGLATHYSVSEK--LPLIEEELGKLVTDDP---SV------IEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269 (350)
Q Consensus 206 -----~~~GLv~~vv~~~~--l~~~~~~l~~l~~~~~---~~------i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~ 269 (350)
...|.+|++.++|. ++.+.+.+.-+.+... .. ...--+.+............+.++.|.+.|+.
T Consensus 221 a~vh~~~sGva~~~a~dd~~Ai~~vr~~lsylp~~~~~~~p~~~~~~~~~~~~~~l~~ivP~d~~~pYDvrevI~rl~D~ 300 (526)
T COG4799 221 AQVHARKSGVADLLAEDDEDAIELVRRLLSYLPSNNREPPPVVPTPDEPDRDDEELDSIVPDDPRKPYDVREVIARLVDD 300 (526)
T ss_pred hhhhcccccceeeeecCHHHHHHHHHHHHHhcCccCCCCCCcCCCCCCcccChhhhcccCCCCCCccccHHHHHHHhcCC
Confidence 24588888776653 2222233333332211 10 00001111111222223334558889999986
Q ss_pred CCHHHHHHHH
Q 018834 270 DTVEEIIDSL 279 (350)
Q Consensus 270 ~~~~ei~~~l 279 (350)
.++.|+.+..
T Consensus 301 ~~F~E~~~~~ 310 (526)
T COG4799 301 GEFLEFKAGY 310 (526)
T ss_pred ccHHHHHhhh
Confidence 6777766544
No 144
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=95.05 E-value=0.27 Score=49.86 Aligned_cols=156 Identities=16% Similarity=0.173 Sum_probs=94.0
Q ss_pred CCEEEEEEcCCCCCC-CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834 42 ANSRMAILNRPSALN-ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY 120 (350)
Q Consensus 42 ~~v~~ItLnrp~~~N-al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 120 (350)
|...-|.=|+|.... +++.+-.....+.++.++. .++-+|.|.-. ..|..|-+ .+.....+..-
T Consensus 293 G~pVGiian~~~~~~G~~~~~~a~K~arfi~lcd~-~~iPlv~l~dt-pGf~~g~~-------------~E~~g~~~~ga 357 (493)
T PF01039_consen 293 GRPVGIIANNPRQRAGALDPDGARKAARFIRLCDA-FNIPLVTLVDT-PGFMPGPE-------------AERAGIIRAGA 357 (493)
T ss_dssp TEEEEEEEE-TTCGGGEB-HHHHHHHHHHHHHHHH-TT--EEEEEEE-CEB--SHH-------------HHHTTHHHHHH
T ss_pred CcceEEEEeccccccccCChHHHHHHHHHHHHHHh-hCCceEEEeec-ccccccch-------------hhhcchHHHHH
Confidence 333445556765322 6999999999999999887 47788877643 44555421 12223455666
Q ss_pred HHHHHHhcCCCcEEEEECCcccccccccccc----cCEEEEeCCeeEecccccccccCCCchHHHHhhccH---------
Q 018834 121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIP----GTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--------- 187 (350)
Q Consensus 121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~----~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g--------- 187 (350)
++++++.++..|.|.++=|.+.|||...... .|+++|.+++.++ ..+.-|+...+.+.--
T Consensus 358 ~~~~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~~-------vm~~e~a~~i~~~~~~~~~~~~~~~ 430 (493)
T PF01039_consen 358 RLLYALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEIG-------VMGPEGAASILYRDELEAAEAEGAD 430 (493)
T ss_dssp HHHHHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EEE-------SS-HHHHHHHHTHHHHHHSCHCCHS
T ss_pred HHHHHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcceee-------ecChhhhheeeehhhhhhhhcccch
Confidence 7888899999999999999999987643333 3677666666554 5544444443332110
Q ss_pred -------HHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834 188 -------HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPL 222 (350)
Q Consensus 188 -------~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~ 222 (350)
....+.- ..-++..+...|++|.++++.+...
T Consensus 431 ~~~~~~~~~~~~~~---~~~~~~~~a~~~~~D~ii~p~~tR~ 469 (493)
T PF01039_consen 431 PEAQRAEKIAEYED---ELSSPYRAASRGYVDDIIDPAETRK 469 (493)
T ss_dssp HHHHHHHHHHHHHH---HHSSHHHHHHTTSSSEESSGGGHHH
T ss_pred hHHHHHHHHHHHHH---hcCCHHHHHhcCCCCCccCHHHHHH
Confidence 0011111 1147888999999999999887764
No 145
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=94.89 E-value=0.027 Score=52.07 Aligned_cols=86 Identities=13% Similarity=0.132 Sum_probs=59.0
Q ss_pred HHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCH
Q 018834 123 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNG 202 (350)
Q Consensus 123 ~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a 202 (350)
...+...+.|+||.|=|---+||.-=...+|.+.+-++++|+. +.|.+ .+-.|-+=... +.. +-.-..|+|
T Consensus 181 L~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG-~AsILWkD~~k-a~e-AAe~mkita 251 (317)
T COG0825 181 LREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEG-CASILWKDASK-AKE-AAEAMKITA 251 (317)
T ss_pred HHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhh-hhhhhhcChhh-hHH-HHHHcCCCH
Confidence 3446789999999999876555543333479999999999883 34544 44444442222 222 233457899
Q ss_pred HHHHHCCCCccccCC
Q 018834 203 AEMMACGLATHYSVS 217 (350)
Q Consensus 203 ~eA~~~GLv~~vv~~ 217 (350)
.+++++|+||.|+|.
T Consensus 252 ~dLk~lgiID~II~E 266 (317)
T COG0825 252 HDLKELGIIDGIIPE 266 (317)
T ss_pred HHHHhCCCcceeccC
Confidence 999999999999986
No 146
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=94.13 E-value=1.1 Score=41.29 Aligned_cols=142 Identities=15% Similarity=0.200 Sum_probs=86.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI 123 (350)
Q Consensus 44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~ 123 (350)
++...++-.=-..++..-.=..|.++++.+-.+ ++.+|+++.+| |.-+.+- . -...+. ....-.+
T Consensus 124 vv~av~df~FmgGSmGsVvGeki~ra~E~A~e~-k~P~v~f~aSG-----GARMQEg-------~-lSLMQM-aktsaAl 188 (294)
T COG0777 124 VVLAVMDFAFMGGSMGSVVGEKITRAIERAIED-KLPLVLFSASG-----GARMQEG-------I-LSLMQM-AKTSAAL 188 (294)
T ss_pred EEEEEEeccccccchhHHHHHHHHHHHHHHHHh-CCCEEEEecCc-----chhHhHH-------H-HHHHHH-HHHHHHH
Confidence 344444432234566666677788888887665 57888877654 3222220 0 011111 1223344
Q ss_pred HHHhcCCCcEEEEECCcccccc-cccccccCEEEEeCCeeEeccccc-----ccc-cCCCchHHHHhhccHHHHHHHhhc
Q 018834 124 YLLGTHLKPHVAILNGVTMGGG-AGVSIPGTFRVACGKTVFATPETL-----IGF-HPDAGASFYLSHLPGHLGEFLALT 196 (350)
Q Consensus 124 ~~i~~~~kP~Ia~i~G~~~GgG-~~Lal~~D~riate~a~f~~Pe~~-----iGl-~P~~G~s~~L~rl~g~~a~~l~lt 196 (350)
.++.....|+|+.+..+++||= +.+++..|+.||-+++.+++.-.+ +|- .|+ |.+
T Consensus 189 ~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRVIEQTire~LPe-----------gfQ------- 250 (294)
T COG0777 189 KRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRVIEQTIREKLPE-----------GFQ------- 250 (294)
T ss_pred HHHHhcCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcchhhhhhhcccCCc-----------chh-------
Confidence 5567789999999999999984 478889999998866655442211 221 121 111
Q ss_pred CCCCCHHHHHHCCCCccccCCCChHH
Q 018834 197 GAKLNGAEMMACGLATHYSVSEKLPL 222 (350)
Q Consensus 197 G~~l~a~eA~~~GLv~~vv~~~~l~~ 222 (350)
+++-.++.|+||.||+..++..
T Consensus 251 ----~aEfLlehG~iD~iv~R~elr~ 272 (294)
T COG0777 251 ----TAEFLLEHGMIDMIVHRDELRT 272 (294)
T ss_pred ----hHHHHHHcCCceeeecHHHHHH
Confidence 4555789999999999877654
No 147
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=93.00 E-value=3.4 Score=42.56 Aligned_cols=144 Identities=13% Similarity=0.063 Sum_probs=92.2
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA 135 (350)
Q Consensus 56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia 135 (350)
-+++.+-.+...+.++.++. -++-+|.|.-. ..|-.|-+-. .....+...++++++.....|.|+
T Consensus 380 g~l~~~~a~Kaarfi~lc~~-~~iPlv~l~D~-pGf~~G~~~E-------------~~G~~~~~a~l~~A~a~~~VP~is 444 (569)
T PLN02820 380 GILFTESALKGAHFIELCAQ-RGIPLLFLQNI-TGFMVGSRSE-------------ASGIAKAGAKMVMAVACAKVPKIT 444 (569)
T ss_pred CccCHHHHHHHHHHHHHHHh-cCCCEEEEEEC-CCCCCCHHHH-------------HhhHHHHHHHHHHHHHhCCCCEEE
Confidence 45888888988888888876 46777766543 2355553221 123456677888889999999999
Q ss_pred EECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhhc-c------------HHH-HHH---Hh
Q 018834 136 ILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P------------GHL-GEF---LA 194 (350)
Q Consensus 136 ~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-~------------g~~-a~~---l~ 194 (350)
+|=|.+.|||..-. +..|++++.+++ .+|..+.-|+.-.+.+. . -.. +.. .-
T Consensus 445 vi~g~a~G~g~~aM~g~~~~~d~~~awp~A-------~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (569)
T PLN02820 445 IIVGGSFGAGNYGMCGRAYSPNFLFMWPNA-------RIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVE 517 (569)
T ss_pred EEECCcchHHHHHhcCcCCCCCEEEECCCC-------eEEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHHHH
Confidence 99999999865322 356777666555 55566555555555431 0 000 000 01
Q ss_pred hcCCCCCHHHHHHCCCCccccCCCChH
Q 018834 195 LTGAKLNGAEMMACGLATHYSVSEKLP 221 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~vv~~~~l~ 221 (350)
..-+..++..+-..|++|.|+++.+-.
T Consensus 518 ~~~~~~~p~~aa~~~~vD~VIdP~dTR 544 (569)
T PLN02820 518 AYEREANPYYSTARLWDDGVIDPADTR 544 (569)
T ss_pred HHHHhCCHHHHHHcCCcCcccCHHHHH
Confidence 112245667788899999999887654
No 148
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=90.28 E-value=0.75 Score=42.27 Aligned_cols=53 Identities=11% Similarity=0.083 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
++.+..+++.+.+|.++..++++++.+.. .++.++++.|...+..++.+||.+
T Consensus 185 ~a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~~ 237 (254)
T PRK08252 185 AALELAERIAANGPLAVAASKRIVVESGD---WSEDEMFARQRELIAPVFTSADAK 237 (254)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCchHH
Confidence 45566778889999999999999999887 799999999999999998888743
No 149
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=90.12 E-value=0.71 Score=42.42 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
.+.+..+++.+.+|.++..++++++.+.. .++++.++.|...+..++.+||.+
T Consensus 188 ~a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~ 240 (257)
T PRK07658 188 DAKKLAKKIAGKSPATTRAVLELLQTTKS---SSYYEGVKREAKIFGEVFTSEDAK 240 (257)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHHH
Confidence 34556677889999999999999999888 799999999999999999888753
No 150
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=89.99 E-value=0.76 Score=42.37 Aligned_cols=52 Identities=13% Similarity=0.233 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
++.+..+++...+|.++..+++.++++.. .+++++++.|.+.+..++.+||.
T Consensus 191 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~ 242 (260)
T PRK05809 191 EAKALANKIAANAPIAVKLCKDAINRGMQ---VDIDTAVAIEAEDFGECFSTEDQ 242 (260)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence 45566678889999999999999999988 79999999999999999988774
No 151
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=89.41 E-value=0.9 Score=41.77 Aligned_cols=52 Identities=13% Similarity=0.097 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
.+.+..+++.+.+|.++..++++++++.. .+++++++.|.+.+..++.+++.
T Consensus 186 ~a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~ 237 (255)
T PRK09674 186 RALQLASKIARHSPLALRAAKQALRQSQE---VDLQAGLAQERQLFTLLAATEDR 237 (255)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence 45566778889999999999999999888 79999999999999999888764
No 152
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=89.02 E-value=7 Score=39.66 Aligned_cols=157 Identities=16% Similarity=0.143 Sum_probs=95.4
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHH
Q 018834 47 AILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 125 (350)
Q Consensus 47 ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (350)
|.=|.|. ..-+|+.+-...-.+.++.... .++-.|.|.-. ..|.-|-|-. .....+...+++++
T Consensus 328 iIANqp~~~~G~l~~~sa~KaArFI~~cd~-~~iPlv~L~d~-pGFm~G~~~E-------------~~giik~Gakl~~A 392 (526)
T COG4799 328 IIANQPRHLGGVLDIDSADKAARFIRLCDA-FNIPLVFLVDT-PGFMPGTDQE-------------YGGIIKHGAKLLYA 392 (526)
T ss_pred EEecCccccccccchHHHHHHHHHHHhhhc-cCCCeEEEeCC-CCCCCChhHH-------------hChHHHhhhHHHhh
Confidence 4446665 4568899988888888865554 46777777543 6688875532 23445667788999
Q ss_pred HhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhc-cHHH---HH---------H
Q 018834 126 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-PGHL---GE---------F 192 (350)
Q Consensus 126 i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-~g~~---a~---------~ 192 (350)
+.++..|.|..|-|.+.|||......-.+- .+-.|+.|..++|..-+-|+.-.+.|. .... .. .
T Consensus 393 ~aeatVPkitvI~rkayGga~~~M~~~~~~---~~~~~AwP~a~iaVMG~egAv~i~~~k~l~~~~~~~~~~~~~~~~~~ 469 (526)
T COG4799 393 VAEATVPKITVITRKAYGGAYYVMGGKALG---PDFNYAWPTAEIAVMGPEGAVSILYRKELAAAERPEEREALLRKQLI 469 (526)
T ss_pred HhhccCCeEEEEecccccceeeeecCccCC---CceeEecCcceeeecCHHHHHHHHHHHHhhcccCchhHHHHHHHHHH
Confidence 999999999999999999986433221111 333444555555565444454444431 1100 00 0
Q ss_pred HhhcCCCCCHHHHHHCCCCccccCCCChH
Q 018834 193 LALTGAKLNGAEMMACGLATHYSVSEKLP 221 (350)
Q Consensus 193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~ 221 (350)
--..-+-.++--|-+.|++|.|+++.+..
T Consensus 470 ~eY~~~~~~p~~aa~r~~iD~vI~p~~tR 498 (526)
T COG4799 470 AEYEEQFSNPYYAAERGYIDAVIDPADTR 498 (526)
T ss_pred HHHHHhccchHHHHHhCCCCcccCHHHHH
Confidence 00111113455566788999998876543
No 153
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=88.59 E-value=1.1 Score=41.19 Aligned_cols=51 Identities=10% Similarity=0.068 Sum_probs=44.7
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+.+.+.+|.+++.++++++.... .+++++++.|.+++..++.++|.
T Consensus 189 a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~ 239 (257)
T PRK06495 189 AMEIAREIASKSPLATRLAKDALNTIEN---MSLRDGYRYEQDITAKLAKTEDA 239 (257)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcChHH
Confidence 4456678889999999999999999888 89999999999999998888764
No 154
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=88.50 E-value=1.3 Score=40.89 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=45.0
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..++++++.+.. .++++.++.|...+..++.+||.
T Consensus 190 a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~ 240 (258)
T PRK09076 190 ALALAQKVANQSPSAVAACKTLIQAARN---GPRAAALALERELFVDLFDTEDQ 240 (258)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcCchH
Confidence 4456678899999999999999999887 79999999999999999988874
No 155
>PLN02600 enoyl-CoA hydratase
Probab=88.21 E-value=1.2 Score=40.79 Aligned_cols=51 Identities=14% Similarity=0.272 Sum_probs=45.0
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..+++.+++... .++++.++.|.+.+..++.+||.
T Consensus 183 a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~ 233 (251)
T PLN02600 183 ALELAQEINQKGPLAIKMAKKAINEGSE---VDMASGLEIEEECYEQVLKTKDR 233 (251)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence 4456678899999999999999998887 79999999999999999988874
No 156
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=87.94 E-value=1.5 Score=40.45 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=44.4
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
.+..+.+.+.+|.++..++++++.+.. .++.++++.|.+.+..++.+|+.+
T Consensus 196 ~~~a~~~~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~~ 246 (263)
T PRK07799 196 LELAELINANGPLAVQAILRTIRETEG---MHENEAFKIDTKIGIPVFLSEDAK 246 (263)
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCccHH
Confidence 345577889999999999999999887 899999999999999998888743
No 157
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=87.10 E-value=1.4 Score=40.48 Aligned_cols=52 Identities=15% Similarity=0.156 Sum_probs=45.0
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+++.+.+|.++..+++.++++.. .+++++++.|.+.+..++.+||.+
T Consensus 195 a~~~a~~la~~~p~a~~~~K~~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~ 246 (260)
T PRK05980 195 ARALARRIIRHSPVAVAAILTAVTRGLN---LSIAEGLLIESEQFARMAGSADLR 246 (260)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence 3444567788999999999999999887 799999999999999999988854
No 158
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=87.07 E-value=1.5 Score=40.38 Aligned_cols=51 Identities=16% Similarity=0.149 Sum_probs=44.3
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..+++.++++.. .++++++..|.+.+.+++.+|+.
T Consensus 191 a~~~a~~i~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~ 241 (259)
T PRK06688 191 ADAQAAKLAAGPASALRYTKRAINAATL---TELEEALAREAAGFGRLLRTPDF 241 (259)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhh---CCHHHHHHHHHHHHHHHhCCHHH
Confidence 3445567788999999999999999888 89999999999999999988874
No 159
>PRK08139 enoyl-CoA hydratase; Validated
Probab=86.70 E-value=1.9 Score=39.96 Aligned_cols=51 Identities=4% Similarity=0.072 Sum_probs=44.5
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.+++.++++++++.. .+++++++.|...+..++.++|.
T Consensus 198 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~ 248 (266)
T PRK08139 198 VARLAAVIAAKSPAAVRIGKEAFYRQAE---MPLADAYAYAGDVMAENMMAEDA 248 (266)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcCchH
Confidence 3445577889999999999999999988 89999999999999998888774
No 160
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=86.22 E-value=1.9 Score=39.64 Aligned_cols=51 Identities=6% Similarity=-0.040 Sum_probs=43.9
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
.+..+++.+.+|.++..++++++++.. .+++++++.|.+.+..++.+||.+
T Consensus 190 ~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~~~~ 240 (257)
T PRK05862 190 LAAATTIASFSLPAVMMAKEAVNRAYE---TTLAEGLLFERRLFHSLFATEDQK 240 (257)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence 344566788899999999999999887 799999999999999999888753
No 161
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=86.16 E-value=1.8 Score=40.33 Aligned_cols=51 Identities=8% Similarity=-0.086 Sum_probs=44.1
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+.+.+.+|.+++.++++++++.. .++.++++.|...+..++.+||.
T Consensus 207 ~~~~a~~ia~~~p~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~ 257 (275)
T PLN02664 207 VRLIAEGIAAKSPLAVTGTKAVLLRSRE---LSVEQGLDYVATWNSAMLVSDDL 257 (275)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHhccChhH
Confidence 4455678899999999999999999887 79999999999999888887763
No 162
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=85.54 E-value=2.1 Score=39.39 Aligned_cols=51 Identities=14% Similarity=0.034 Sum_probs=43.6
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..++++++++.. .++++.++.|.+.+..++.+||.
T Consensus 187 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~s~d~ 237 (255)
T PRK08150 187 AMELARRIAQNAPLTNFAVLNALPRIAD---MSADDGLFVESLMAAVAQSAPEA 237 (255)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence 3345577889999999999999999877 79999999999998888887764
No 163
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=85.49 E-value=7.2 Score=35.69 Aligned_cols=133 Identities=14% Similarity=0.157 Sum_probs=73.1
Q ss_pred CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834 57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136 (350)
Q Consensus 57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~ 136 (350)
.+|.++-+.+...|-.++.++.-|=|.+-= =|.|+++..-. .+|+. +..+.-||=..
T Consensus 100 ~Idd~va~~viaqlL~Ld~ed~~K~I~lyI----NSPGG~vtagl----------------AIYDt---Mq~ik~~V~Ti 156 (275)
T KOG0840|consen 100 PIDDDVANLVIAQLLYLDSEDPKKPIYLYI----NSPGGSVTAGL----------------AIYDT---MQYIKPDVSTI 156 (275)
T ss_pred cCcHHHHHHHHHHHHHhhccCCCCCeEEEE----eCCCCccchhh----------------hHHHH---HHhhCCCceee
Confidence 378888888888888888766656444422 24455542211 12222 33344555555
Q ss_pred ECCcccccccccccccCEEEEeCCeeEeccccccccc-CCCch----HHHHhh------ccHHH-HHHHhhcCC------
Q 018834 137 LNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH-PDAGA----SFYLSH------LPGHL-GEFLALTGA------ 198 (350)
Q Consensus 137 i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~-P~~G~----s~~L~r------l~g~~-a~~l~ltG~------ 198 (350)
+=|.|.+-|.-|..+ .+..-+++||..++=+. |-+|+ +-+.-+ .--.. -.|.--||+
T Consensus 157 c~G~Aas~aalLLaa-----G~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~i~ 231 (275)
T KOG0840|consen 157 CVGLAASMAALLLAA-----GAKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEIYAKHTGQPLEVIE 231 (275)
T ss_pred ehhhHHhHHHHHHhc-----CCCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 556665544333222 24456677777776664 33321 111111 11112 234445665
Q ss_pred -------CCCHHHHHHCCCCccccCC
Q 018834 199 -------KLNGAEMMACGLATHYSVS 217 (350)
Q Consensus 199 -------~l~a~eA~~~GLv~~vv~~ 217 (350)
-++++||+++||+|+|+..
T Consensus 232 ~d~dRd~fmsa~EA~eyGliD~v~~~ 257 (275)
T KOG0840|consen 232 KDMDRDRFMSAEEAKEYGLIDKVIDH 257 (275)
T ss_pred hhhcccccCCHHHHHHhcchhhhhcC
Confidence 4789999999999999864
No 164
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=85.10 E-value=2.4 Score=38.91 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=44.7
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+++.+.+|.++..+++.++.... .++.++++.|...+..++.+||.+
T Consensus 188 a~~~a~~la~~~~~~~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~~ 239 (256)
T TIGR02280 188 AQALAVHLAAQPTRGLALTKRAIQAAAT---NSLDTQLDLERDLQRELGRSADYA 239 (256)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence 3345567888999999999999999887 789999999999999999888754
No 165
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=85.02 E-value=2.6 Score=38.77 Aligned_cols=51 Identities=12% Similarity=0.061 Sum_probs=42.2
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHH--HHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVE--STKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E--~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..++++++++.. .+++++++.| ...+..++.+||.
T Consensus 189 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~d~ 241 (259)
T PRK06494 189 AERWADDILACSPLSIRASKQAVYRGLE---VSLEEAITAQRDYPAVEARRASQDY 241 (259)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHhcCccH
Confidence 3445567889999999999999999887 7999999999 5677777777764
No 166
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=84.62 E-value=2.6 Score=38.84 Aligned_cols=51 Identities=8% Similarity=0.145 Sum_probs=44.4
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++...+|.+++.++++++.+.. .+++++++.|...+..++.+||.
T Consensus 192 a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~ 242 (260)
T PRK07657 192 AIEIAEKIASNGPIAVRQAKEAISNGIQ---VDLHTGLQIEKQAYEGTIPTKDR 242 (260)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcCHhH
Confidence 4455577889999999999999999887 78999999999999999888764
No 167
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=84.58 E-value=2.7 Score=38.49 Aligned_cols=53 Identities=4% Similarity=-0.157 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
.+.+..+++...+|.++..++++++++.. .++++.++.|.+.+..++.++|.+
T Consensus 185 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~d~~ 237 (249)
T PRK07938 185 AALEVARKIAAKDTRVIRAAKEALNGIDP---QDVERSYRWEQGFTFELNLAGVSD 237 (249)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhcc---CCHHHHHHHHHHHHHHHhcCccHH
Confidence 34455677889999999999999998877 789999999999998888888753
No 168
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=84.45 E-value=2.4 Score=39.04 Aligned_cols=51 Identities=4% Similarity=-0.111 Sum_probs=44.4
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.+++.++++++.... .++++.++.|...+..++.++|.
T Consensus 192 a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~ 242 (260)
T PRK07659 192 AKQKISEWLQKPLKAMIETKQIYCELNR---SQLEQVLQLEKRAQYAMRQTADH 242 (260)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCHhH
Confidence 4455677888999999999999998887 79999999999999999888774
No 169
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=83.82 E-value=2.9 Score=38.92 Aligned_cols=52 Identities=8% Similarity=0.050 Sum_probs=44.9
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+++.+.+|.++..++++++.... .++++.++.|...+..++.+||.+
T Consensus 209 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~~ 260 (277)
T PRK08258 209 AQALARRLAAGPTFAHGMTKTMLHQEWD---MGLEEAIEAEAQAQAICMQTEDFR 260 (277)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhcc---CCHHHHHHHHHHHHHHHhcCchHH
Confidence 3445577889999999999999999887 899999999999999999888743
No 170
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=83.62 E-value=2.6 Score=38.75 Aligned_cols=49 Identities=16% Similarity=0.101 Sum_probs=43.1
Q ss_pred HHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 294 TLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 294 ~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
..+.+.+.+|.+++.+++.++.+.. .++.+.++.|...+..++.+|+.+
T Consensus 196 ~a~~l~~~~~~~~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~ 244 (260)
T PRK07511 196 LADQLAAGSPNALARIKSLIADAPE---ATLAAQLEAERDHFVASLHHADAL 244 (260)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCchHH
Confidence 4456778899999999999999888 899999999999999999998754
No 171
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=83.41 E-value=3 Score=38.35 Aligned_cols=52 Identities=13% Similarity=0.018 Sum_probs=45.0
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+++.+.+|.++..+++.+++... .++.++++.|.+.+..++.+||.+
T Consensus 195 a~~~a~~l~~~~~~~~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~~ 246 (262)
T PRK07509 195 ALALAREIAQRSPDAIAAAKRLINRSWT---ASVRALLARESVEQIRLLLGKNQK 246 (262)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence 4456677888999999999999999887 799999999999999998888753
No 172
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=83.15 E-value=2.9 Score=38.21 Aligned_cols=51 Identities=12% Similarity=-0.094 Sum_probs=44.3
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..+++++++... .++++.++.|.+.+..++.+||.
T Consensus 180 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~d~ 230 (248)
T PRK06072 180 AEEMANRISNGPFQSYIAAKRMINLVLY---NDLEEFLEYESAIQGYLGKTEDF 230 (248)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHhCChhH
Confidence 4456677888999999999999998877 78999999999999999888874
No 173
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=83.12 E-value=3.2 Score=38.51 Aligned_cols=51 Identities=12% Similarity=0.023 Sum_probs=43.8
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.+++.+++.+++... .+++++++.|...+..++.+||.
T Consensus 205 a~~~a~~ia~~~~~a~~~~K~~l~~~~~---~~l~~~~~~~~~~~~~~~~~~d~ 255 (272)
T PRK06142 205 AHATAREIAAKSPLAVRGTKEVLDYMRD---HRVADGLRYVATWNAAMLPSKDL 255 (272)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCccH
Confidence 3345567788999999999999998877 78999999999999998888774
No 174
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=82.98 E-value=3.1 Score=38.23 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=44.4
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++...+|.++..++++++.+.. .++++.++.|...+..++.++|.
T Consensus 194 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~d~ 244 (256)
T PRK06143 194 VERLAASLAGCGPQALRQQKRLLREWED---MPLDVAIDDSVAEFGAAFLTGEP 244 (256)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHhcChHH
Confidence 4455677889999999999999999877 78999999999999998888874
No 175
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=82.87 E-value=3.6 Score=37.78 Aligned_cols=50 Identities=14% Similarity=0.176 Sum_probs=43.2
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
.+..+.+.+.+|.+++.++++++.... .++.++++.|...+..++.++|.
T Consensus 188 ~~~a~~la~~~~~a~~~~K~~~~~~~~---~~~~~~~~~e~~~~~~~~~~~d~ 237 (255)
T PRK06563 188 IELAERIARAAPLGVQATLASARAAVR---EGEAAAAAQLPPELRPLFTSEDA 237 (255)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCchH
Confidence 344567788999999999999998877 79999999999999999888874
No 176
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=82.51 E-value=3.4 Score=38.04 Aligned_cols=49 Identities=14% Similarity=0.157 Sum_probs=42.4
Q ss_pred HHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 294 TLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 294 ~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
..+.+.+.+|.++..++++++++.. .+++++++.|.+.+..++.+|+.+
T Consensus 196 ~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~ 244 (261)
T PRK08138 196 LAREIARMPPLALAQIKEVVLAGAD---APLDAALALERKAFQLLFDSEDQK 244 (261)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcCHHHH
Confidence 3455678899999999999999888 799999999999999999888753
No 177
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=81.89 E-value=3.7 Score=37.77 Aligned_cols=51 Identities=8% Similarity=-0.018 Sum_probs=43.9
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+.+.+.+|.++..+++++++... .+++++++.|...+..++.+||.
T Consensus 194 a~~~a~~ia~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~ 244 (262)
T PRK08140 194 AQQLAAHLATQPTRGLALIKQAMNASAT---NTLDAQLDLERDLQREAGRSADY 244 (262)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhh---CCHHHHHHHHHHHHHHHhcChhH
Confidence 3445577788999999999999998887 79999999999999998888774
No 178
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=81.39 E-value=2.9 Score=38.27 Aligned_cols=51 Identities=12% Similarity=-0.027 Sum_probs=44.7
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
.+..+++.+.+|.++..+++++++... .++++.++.|...+..++.++|.+
T Consensus 190 ~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~~ 240 (249)
T PRK07110 190 LELARSLAEKPRHSLVLLKDHLVADRR---RRLPEVIEQEVAMHEKTFHQPEVK 240 (249)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhhh---ccHHHHHHHHHHHHHHHhCCHhHH
Confidence 345577889999999999999999888 899999999999999999988753
No 179
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=80.83 E-value=4.1 Score=37.70 Aligned_cols=48 Identities=21% Similarity=0.147 Sum_probs=41.0
Q ss_pred HHHHHHhc-CcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 294 TLRLLKEA-SPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 294 ~l~~~~~~-sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
..+++.++ +|.++..+++++++... .+++++++.|...+..++.+|+.
T Consensus 206 ~a~~i~~~~~p~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~ 254 (272)
T PRK06210 206 YAEDLARNVSPASMAVIKRQLYEDAF---QTLAEATARANREMHESLQRPDF 254 (272)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHhccc---CCHHHHHHHHHHHHHHHhcCccH
Confidence 34556664 99999999999999877 79999999999999999888864
No 180
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=80.14 E-value=4.6 Score=37.14 Aligned_cols=52 Identities=13% Similarity=0.029 Sum_probs=44.9
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+++.+.+|.++..+++++++... .++++.++.|...+..++.+|+.+
T Consensus 193 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 244 (260)
T PRK07827 193 VAALLADLRRGSPQGLAESKALTTAAVL---AGFDRDAEELTEESARLFVSDEAR 244 (260)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence 4456678889999999999999999887 799999999999999888887653
No 181
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=79.77 E-value=4.8 Score=37.14 Aligned_cols=50 Identities=12% Similarity=0.170 Sum_probs=43.1
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
.+..+++.+.+|.++..+++++++... .++++.++.|...+..++.++|.
T Consensus 199 ~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~ 248 (266)
T PRK09245 199 RALAERIAANPPHALRLTKRLLREGQH---ASLDTLLELSAAYQALAHHTADH 248 (266)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCHhH
Confidence 345577889999999999999998877 78999999999999888887764
No 182
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=79.51 E-value=4.4 Score=37.52 Aligned_cols=50 Identities=12% Similarity=0.064 Sum_probs=43.1
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
.+..+++.+.+|.++..+++++++... .+++++++.|...+..++.+||.
T Consensus 202 ~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~ 251 (269)
T PRK06127 202 ADYAATIAGNAPLTLRAAKRAIAELLK---DEPERDMAACQALVAACFDSEDY 251 (269)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcChHH
Confidence 344566778899999999999999887 78999999999999999888764
No 183
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=79.37 E-value=3 Score=38.91 Aligned_cols=51 Identities=10% Similarity=-0.080 Sum_probs=43.8
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+.+.+.+|.++..+++++++... .+++++++.|.+.+...+.+||.
T Consensus 203 a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~ 253 (278)
T PLN03214 203 AASAMERALKLPSAARAATKALLREEFS---AAWEAYYEEEAKGGWKMLSEPSI 253 (278)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhHH---HHHHHHHHHHHHHHHHHhCCHHH
Confidence 4445577888999999999999998877 78999999999999888888764
No 184
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=79.04 E-value=4.7 Score=37.13 Aligned_cols=49 Identities=6% Similarity=0.041 Sum_probs=41.8
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 293 STLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 293 ~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+..+++.+.+|.++..+++++++... .++++.++.|...+..++.+||.
T Consensus 196 ~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~s~d~ 244 (262)
T PRK07468 196 AEVTPYLSCAPGAVAAAKALVRALGA---PIDEAVIDATIEALADTWETEEA 244 (262)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhhhc---cChHHHHHHHHHHHHHHhcCHHH
Confidence 34567788899999999999998766 67899999999999998888874
No 185
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=78.84 E-value=5 Score=37.01 Aligned_cols=52 Identities=6% Similarity=-0.047 Sum_probs=43.7
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+.+.+.+|.++..++++++.+.. .++.+.++.|...+..++.+||.+
T Consensus 198 a~~~a~~l~~~~~~a~~~~K~~~~~~~~---~~~~~~~~~e~~~~~~~~~s~d~~ 249 (266)
T PRK05981 198 AMKLAHELANGPTVALGLIRKLYWDSPE---NDFEEQLNLEREAQRIAGKTEDFK 249 (266)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhh---cCHHHHHHHHHHHHHHHhcChhHH
Confidence 3345566778899999999999998877 789999999999999988888743
No 186
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=78.32 E-value=5.2 Score=38.53 Aligned_cols=159 Identities=12% Similarity=0.077 Sum_probs=89.1
Q ss_pred HhcCCCcEEEEECCccccccccccccc-CEEEEeCCeeEeccccccc--ccCCCchH---H--HHhhccHHH-HHHHhhc
Q 018834 126 LGTHLKPHVAILNGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIG--FHPDAGAS---F--YLSHLPGHL-GEFLALT 196 (350)
Q Consensus 126 i~~~~kP~Ia~i~G~~~GgG~~Lal~~-D~riate~a~f~~Pe~~iG--l~P~~G~s---~--~L~rl~g~~-a~~l~lt 196 (350)
|....-+.+.. |..+...+.+.+++ +-++..+.+.++++-..-| .+|-.++. + +..+.++.. +..+.|-
T Consensus 104 IAaVnG~a~Gg--G~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~llltG~~i~A~eA~~~GLv 181 (342)
T PRK05617 104 IALMDGIVMGG--GVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAADALYAGLA 181 (342)
T ss_pred EEEEcCEEEcc--HhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHHHHHcCCCCCHHHHHHcCCc
Confidence 44455555544 55566666666665 5677778888887433222 13433331 1 112233444 8888888
Q ss_pred CCCCCHHHHHHC------------------------------------CCCccccCCCChHH------------HHHHHH
Q 018834 197 GAKLNGAEMMAC------------------------------------GLATHYSVSEKLPL------------IEEELG 228 (350)
Q Consensus 197 G~~l~a~eA~~~------------------------------------GLv~~vv~~~~l~~------------~~~~l~ 228 (350)
-+.++.++.... ..+++++....+.+ +.+.+.
T Consensus 182 ~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~a~~~a~ 261 (342)
T PRK05617 182 DHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRAWIDECFAGDTVEDIIAALEADGGEFAAKTAD 261 (342)
T ss_pred ceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHHhccHHHHHHHHH
Confidence 888887765432 11222222222222 223446
Q ss_pred HhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-cCCHHHHHHHH-hc-cCCCC
Q 018834 229 KLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-LDTVEEIIDSL-ES-EASLI 286 (350)
Q Consensus 229 ~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~~~~~ei~~~l-ek-~~~~~ 286 (350)
+++..+|.+++.+|+.++......... ...+...+..+|. .+..+++.+++ +| +.|+|
T Consensus 262 ~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~egv~afl~ek~r~p~~ 323 (342)
T PRK05617 262 TLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLRSPDFVEGVRAVLIDKDRNPKW 323 (342)
T ss_pred HHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCchhhccceEEEcCCCCCCC
Confidence 778889999999999998654333222 2234556667774 56666666665 65 66654
No 187
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=77.82 E-value=5.9 Score=36.37 Aligned_cols=47 Identities=11% Similarity=-0.144 Sum_probs=39.2
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhh
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVR 340 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~ 340 (350)
+.+..+++.+.+|.++..+++++++... .++++.++.|...+...+.
T Consensus 188 a~~~a~~la~~~~~a~~~~K~~~~~~~~---~~~~~~~~~e~~~~~~~~~ 234 (254)
T PRK08259 188 AEELAAELAAFPQTCLRADRLSALEQWG---LPEEAALANEFAHGLAVLA 234 (254)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHHh
Confidence 3445577889999999999999998877 7999999999987666554
No 188
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=77.28 E-value=6.5 Score=36.20 Aligned_cols=51 Identities=10% Similarity=0.125 Sum_probs=41.6
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHH----HHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVEST----KFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~----~~~~~~~~~~~ 344 (350)
+.+..+++...+|.++..+++++++... .++.++++.|.. .+..++.+||.
T Consensus 189 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~~d~ 243 (261)
T PRK03580 189 ARELAQQLVNSAPLAIAALKEIYRETSE---MPVEEAYRYIRSGVLKHYPSVLHSEDA 243 (261)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHhhhHHHHHHHhcCccH
Confidence 3345567889999999999999999887 799999999874 67777777764
No 189
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=76.63 E-value=4 Score=38.49 Aligned_cols=53 Identities=8% Similarity=-0.043 Sum_probs=43.7
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+++...+|.++..++++++.+... .++++.++.|...+..+..++|.+
T Consensus 204 a~~~a~~la~~~p~a~~~~K~~l~~~~~~--~~l~~~~~~e~~~~~~~~~s~d~~ 256 (298)
T PRK12478 204 VAEVATELARIPLSQLQAQKLIVNQAYEN--MGLASTQTLGGILDGLMRNTPDAL 256 (298)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHh--cchhHHHHHHHHHHHHHhcChhHH
Confidence 33445677889999999999999987651 369999999999999999998864
No 190
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=76.49 E-value=5.8 Score=36.36 Aligned_cols=52 Identities=17% Similarity=0.086 Sum_probs=44.8
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+.+.+.+|.++..+++.++.... .++++.++.|...+..++.+||.+
T Consensus 193 a~~~a~~la~~~~~a~~~~K~~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~ 244 (255)
T PRK07260 193 CEQLLKKLRRGSSNSYAAIKSLVWESFF---KGWEDYAKLELALQESLAFKEDFK 244 (255)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHhcCHHHH
Confidence 4455677889999999999999999877 789999999999999998888753
No 191
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=75.89 E-value=7.8 Score=35.71 Aligned_cols=48 Identities=13% Similarity=0.185 Sum_probs=41.4
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRR 341 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~ 341 (350)
+.+..+.+...+|.++..++++++.... .++++.++.|.+.+..++.+
T Consensus 189 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s 236 (258)
T PRK06190 189 ARRLAASIAGNNPAAVRALKASYDDGAA---AQTGDALALEAEAARAHNRS 236 (258)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHHcC
Confidence 3445567888999999999999999888 89999999999999888776
No 192
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=75.62 E-value=28 Score=34.63 Aligned_cols=150 Identities=15% Similarity=0.116 Sum_probs=96.0
Q ss_pred EEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834 46 MAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124 (350)
Q Consensus 46 ~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 124 (350)
-|.-|+|+ ....|..+.-....+.++-..+ ..+-.|.|...+. |--|.+...- ...+..-.+++
T Consensus 352 gIvgnn~kf~~G~L~s~sa~KgarfIe~c~q-~~IPLi~l~ni~G-fm~g~~~e~~-------------gIaK~gAklv~ 416 (536)
T KOG0540|consen 352 GIVGNNPKFAGGVLFSESAVKGARFIELCDQ-RNIPLIFLQNITG-FMVGRAAEAG-------------GIAKHGAKLVY 416 (536)
T ss_pred EEeccCchhcccccchhhhhhhHHHHHHHHh-cCCcEEEEEccCC-ccccchhhhh-------------chhhhhhhhhh
Confidence 35557777 4567777777777777776654 4788888877644 8888766432 22334456788
Q ss_pred HHhcCCCcEEEEECCcccccccc---cccccCEEEEeCCeeEecccccccccCCCchHHHHhhc-----c--HHHHHHHh
Q 018834 125 LLGTHLKPHVAILNGVTMGGGAG---VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-----P--GHLGEFLA 194 (350)
Q Consensus 125 ~i~~~~kP~Ia~i~G~~~GgG~~---Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-----~--g~~a~~l~ 194 (350)
+.+.-..|-|.++-|.+.||-.+ -.+..|+.++.++++++ +.-+-++.-.+.+. . +....+..
T Consensus 417 a~a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~Ia-------vmG~~~a~~Vi~q~~~e~a~~~~~~~~E~f 489 (536)
T KOG0540|consen 417 AVACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIA-------VMGGKQAANVIFQITLEKAVALKAPYIEKF 489 (536)
T ss_pred hhhhccCceEEEEecCccCCcccccccccCCceeEEcccceee-------eccccchhhhhhhhhhhhhhhhcchHHHHh
Confidence 88899999999999999997655 44567888877777655 32222333234333 1 11112221
Q ss_pred hcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834 195 LTGAKLNGAEMMACGLATHYSVSEKLPL 222 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~ 222 (350)
|.++. |...|+.|.++++.+...
T Consensus 490 --~npy~---a~~Rg~~D~II~p~~tR~ 512 (536)
T KOG0540|consen 490 --GNPYY---AAARGWDDGIIDPSDTRK 512 (536)
T ss_pred --cCccH---HHHhhccccccChhHhhH
Confidence 55544 457789999988876554
No 193
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=74.18 E-value=7.4 Score=35.80 Aligned_cols=51 Identities=12% Similarity=0.122 Sum_probs=42.0
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHH-HHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHC-TKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~-l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..+++.++.+.. .++.+. ++.|...+..++.++|.
T Consensus 193 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~~e~~~~~~~~~~~d~ 244 (262)
T PRK05995 193 VDELLAALVANSPQAVRAGKRLVRDVAG---RPIDAALIADTASRIALIRATEEA 244 (262)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhc---CChhhHHHHHHHHHHHHHhcCHHH
Confidence 3345577788999999999999998877 789888 89998888888777764
No 194
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=74.09 E-value=5.5 Score=36.95 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=41.8
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccC
Q 018834 293 STLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHG 343 (350)
Q Consensus 293 ~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~ 343 (350)
+..+++.++||..+....+.++.+.+ .++.++++.|.+++......+|
T Consensus 224 ~l~~~Ia~~~~~~v~~~K~svn~~~e---~~l~e~l~~e~~~~~s~~~~~d 271 (290)
T KOG1680|consen 224 KLAEQIAKNSPLVVRADKESVNAAYE---TTLFEGLELERDLFGSTFATED 271 (290)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhh---ccHHHHHHhhhhhhhhhhhhHH
Confidence 34477889999999999999999999 9999999999999987766554
No 195
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=74.05 E-value=6.9 Score=35.90 Aligned_cols=51 Identities=4% Similarity=-0.196 Sum_probs=42.8
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+.++.+.+.+|.++..++++++.. . .++.+.++.|.+....++.+||..
T Consensus 188 ~~~~a~~l~~~~p~a~~~~K~~~~~~-~---~~~~~~~~~e~~~~~~~~~~~~~~ 238 (255)
T PRK07112 188 LRKHLLRLRCLNKAAVARYKSYASTL-D---DTVAAARPAALAANIEMFADPENL 238 (255)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHcChHHH
Confidence 34466788999999999999999876 4 479999999999999988888743
No 196
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=71.79 E-value=11 Score=34.37 Aligned_cols=53 Identities=13% Similarity=-0.062 Sum_probs=43.5
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+++.+.+|.++..+++.+++.... .+++++++.|.+.+..++.+||.+
T Consensus 188 a~~~a~~la~~~~~a~~~~K~~~~~~~~~--~~l~~~~~~e~~~~~~~~~~~d~~ 240 (249)
T PRK05870 188 ALELAAGPAAAPRELVLATKASMRATASL--AQHAAAVEFELGPQAASVQSPEFA 240 (249)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcccc--CCHHHHHHHHHHHHHHHhcChhHH
Confidence 34455778899999999999999987530 379999999999999999988753
No 197
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=71.60 E-value=5.3 Score=36.26 Aligned_cols=51 Identities=10% Similarity=0.128 Sum_probs=45.0
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..+.+.+++... ..+.+.++.|.+.+.+.+.+||.
T Consensus 185 a~~~a~~l~~~~~~a~~~~K~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 235 (245)
T PF00378_consen 185 ALELAKRLAAKPPSALRATKKALNRALE---QSLEEALEFEQDLFAECFKSEDF 235 (245)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHH---SHHHHHHHHHHHHHHHHHTSHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHcCCHHH
Confidence 4456678889999999999999999877 78999999999999999988864
No 198
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=67.40 E-value=12 Score=34.53 Aligned_cols=50 Identities=20% Similarity=0.165 Sum_probs=38.7
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHH-HHHHHhhhhhccCC
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKV-ESTKFGTSVRRHGG 344 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~-E~~~~~~~~~~~~~ 344 (350)
.+..+++.+.+|.++..+++.+++... .++.+.++. +...+..++.++|.
T Consensus 196 ~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~~~~~~~~~~~~~~~s~d~ 246 (265)
T PRK05674 196 EAWIANLLLNSPQALRASKDLLREVGD---GELSPALRRYCENAIARIRVSAEG 246 (265)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhc---cChhHHHHHHHHHHHHHHhcCHHH
Confidence 344567788999999999999999988 789888876 44566666666653
No 199
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=66.74 E-value=13 Score=34.48 Aligned_cols=49 Identities=12% Similarity=0.053 Sum_probs=38.6
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHH--Hhhhhhcc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTK--FGTSVRRH 342 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~--~~~~~~~~ 342 (350)
+.+..+.+...+|.++..++++++.+.. .+++++++.|... +..++.++
T Consensus 199 a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~ 249 (275)
T PRK09120 199 TRELAAKLLEKNPVVLRAAKDGFKRVRE---LTWDQAEDYLYAKLEQANSLDPE 249 (275)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHhhCCH
Confidence 4455677889999999999999999988 7999999988653 33345555
No 200
>PLN02888 enoyl-CoA hydratase
Probab=66.69 E-value=15 Score=34.00 Aligned_cols=46 Identities=11% Similarity=0.037 Sum_probs=38.8
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhh
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSV 339 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~ 339 (350)
+.+..+++.+.+|.++..++++++.... .+++++++.|...+..+.
T Consensus 194 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~ 239 (265)
T PLN02888 194 AREVAEAIIKNNQGMVLRYKSVINDGLK---LDLGHALQLEKERAHDYY 239 (265)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHh
Confidence 3445577889999999999999999887 789999999988777664
No 201
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=66.60 E-value=12 Score=35.37 Aligned_cols=79 Identities=11% Similarity=0.162 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHcCC---CceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834 61 NMGAKLNKLFKAWENDP---NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL 137 (350)
Q Consensus 61 ~m~~~L~~~l~~~~~d~---~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i 137 (350)
.-..+|.++++.+.... .+.+|||.=. ||.+.++. . | ..+.+.++|+.+|.|||++|
T Consensus 55 ~A~~~I~~al~~~~~~~~~~~~Dviii~RG------GGs~eDL~------------~-F-N~e~varai~~~~~PvisaI 114 (319)
T PF02601_consen 55 GAAASIVSALRKANEMGQADDFDVIIIIRG------GGSIEDLW------------A-F-NDEEVARAIAASPIPVISAI 114 (319)
T ss_pred chHHHHHHHHHHHHhccccccccEEEEecC------CCChHHhc------------c-c-ChHHHHHHHHhCCCCEEEec
Confidence 44567777777776554 4666555321 34443332 1 1 23568889999999999976
Q ss_pred CCcccccccccccccCEEEEeCCe
Q 018834 138 NGVTMGGGAGVSIPGTFRVACGKT 161 (350)
Q Consensus 138 ~G~~~GgG~~Lal~~D~riate~a 161 (350)
||-.=- .-.=+.||+|..|+++
T Consensus 115 -GHe~D~-ti~D~vAd~ra~TPta 136 (319)
T PF02601_consen 115 -GHETDF-TIADFVADLRAPTPTA 136 (319)
T ss_pred -CCCCCc-hHHHHHHHhhCCCHHH
Confidence 111000 1122347778777754
No 202
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=66.40 E-value=12 Score=34.15 Aligned_cols=51 Identities=12% Similarity=0.107 Sum_probs=41.6
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+++.+.+|.++..++++++... ..+.+.++.|.+.+..++.+||.+
T Consensus 192 a~~~a~~l~~~~~~a~~~~K~~l~~~~----~~l~~~~~~e~~~~~~~~~~~~~~ 242 (251)
T PRK06023 192 TLKAAEELAAKPPQALQIARDLMRGPR----EDILARIDEEAKHFAARLKSAEAR 242 (251)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhch----hhHHHHHHHHHHHHHHHhCCHHHH
Confidence 344567788999999999999998763 469999999999988888887743
No 203
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=65.86 E-value=15 Score=33.46 Aligned_cols=48 Identities=10% Similarity=0.130 Sum_probs=40.0
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
.+..+++.+.+|.++..+++.+++. . ++++.++.|...+..++.+||.
T Consensus 178 ~~~a~~l~~~~~~a~~~~K~~l~~~-~----~~~~~~~~e~~~~~~~~~~~d~ 225 (243)
T PRK07854 178 QAWAAEIAGLAPLALQHAKRVLNDD-G----AIEEAWPAHKELFDKAWASQDA 225 (243)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHcc-C----CHHHHHHHHHHHHHHHhcCchH
Confidence 3455678889999999999999875 3 6999999999999988888764
No 204
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=64.96 E-value=21 Score=33.32 Aligned_cols=74 Identities=26% Similarity=0.406 Sum_probs=48.0
Q ss_pred EeCCEEEEEEcCCCCCCCCCHHHHHHHH-----------------------HHHHHHHcCCCceEEEEEcCCCccccCCC
Q 018834 40 GKANSRMAILNRPSALNALNTNMGAKLN-----------------------KLFKAWENDPNIGFVSMKGSGRAFCAGGD 96 (350)
Q Consensus 40 ~~~~v~~ItLnrp~~~Nal~~~m~~~L~-----------------------~~l~~~~~d~~v~~vvl~g~g~~F~aG~D 96 (350)
+.|+|++|. | -..|+.+++.+|. ++|+.+++||+.++||+-|. -|++
T Consensus 144 ~~G~IGiVS--r---SGTLTyE~~~qlt~~G~GqS~~IGiGGDpi~Gt~fid~L~~fe~Dp~T~~ivmiGE-----iGG~ 213 (293)
T COG0074 144 KPGNIGIVS--R---SGTLTYEAVSQLTEAGLGQSTAIGIGGDPIPGTSFIDALEMFEADPETEAIVMIGE-----IGGP 213 (293)
T ss_pred cCCceEEEe--c---CcchHHHHHHHHHhcCCceEEEEEeCCCCcCCccHHHHHHHHhcCccccEEEEEec-----CCCc
Confidence 367777642 3 2457777777765 67888899999999999886 1222
Q ss_pred hhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Q 018834 97 IVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (350)
Q Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~ 142 (350)
-. +.+.+|... ....||||+++-|.+.
T Consensus 214 aE-----------e~AA~~i~~--------~~~~KPVVa~iaG~ta 240 (293)
T COG0074 214 AE-----------EEAAEYIKA--------NATRKPVVAYIAGRTA 240 (293)
T ss_pred HH-----------HHHHHHHHH--------hccCCCEEEEEeccCC
Confidence 21 222333221 2344999999999865
No 205
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=62.13 E-value=21 Score=32.69 Aligned_cols=47 Identities=19% Similarity=0.123 Sum_probs=38.6
Q ss_pred HHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHH-HHHHHHhhhhhccCC
Q 018834 295 LRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTK-VESTKFGTSVRRHGG 344 (350)
Q Consensus 295 l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~-~E~~~~~~~~~~~~~ 344 (350)
.+.+.+.+|.+++.++++++.... .++++.+. .|...+..++.++|.
T Consensus 186 a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~~~~~e~~~~~~~~~s~d~ 233 (251)
T TIGR03189 186 DEHPAKLSASSLRFAVRAARLGMN---ERVKAKIAEVEALYLEELMATHDA 233 (251)
T ss_pred HHHHHhCCHHHHHHHHHHHHhhhc---ccHHHHHHHHHHHHHHHHhCCHhH
Confidence 367889999999999999998877 78888774 788888777777664
No 206
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=61.33 E-value=12 Score=36.51 Aligned_cols=160 Identities=9% Similarity=-0.040 Sum_probs=86.4
Q ss_pred HhcCCCcEEEEECCccccccccccccc-CEEEEeCCeeEeccccccc--ccCCCchH---H--HHhhccHHH-HHHHhhc
Q 018834 126 LGTHLKPHVAILNGVTMGGGAGVSIPG-TFRVACGKTVFATPETLIG--FHPDAGAS---F--YLSHLPGHL-GEFLALT 196 (350)
Q Consensus 126 i~~~~kP~Ia~i~G~~~GgG~~Lal~~-D~riate~a~f~~Pe~~iG--l~P~~G~s---~--~L~rl~g~~-a~~l~lt 196 (350)
|....-+.+.. |..+...+.+.+++ +-+++-+.+.+++.-.--| ++|..++. + +..+.++.. |..+.|-
T Consensus 109 IAaV~G~a~Gg--G~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~a~~l~ltG~~i~a~eA~~~GLv 186 (379)
T PLN02874 109 VALVHGLVMGG--GAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLGEYLALTGARLNGKEMVACGLA 186 (379)
T ss_pred EEEecCeEEec--HHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHHHHHHHHcCCcccHHHHHHcCCc
Confidence 44455555544 66666666666655 4688888888886532111 12332221 1 112333434 8888888
Q ss_pred CCCCCHHHHHHC--C-----------------------------------CCccccCCCChHH----------------H
Q 018834 197 GAKLNGAEMMAC--G-----------------------------------LATHYSVSEKLPL----------------I 223 (350)
Q Consensus 197 G~~l~a~eA~~~--G-----------------------------------Lv~~vv~~~~l~~----------------~ 223 (350)
-+.+..++...+ - .++.++...++.+ +
T Consensus 187 ~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~eii~al~~~~~~~~~~~A 266 (379)
T PLN02874 187 THFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEIIKAFESEASKTGNEWI 266 (379)
T ss_pred cEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHHHHHHHhhcccccccHHH
Confidence 888877665430 0 0111111112221 1
Q ss_pred HHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHH-HHHHHHHh-c---CcCCHHHHHHHH-hc-cCCCCC
Q 018834 224 EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-RIDIVDKC-F---GLDTVEEIIDSL-ES-EASLIN 287 (350)
Q Consensus 224 ~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~i~~~-f---~~~~~~ei~~~l-ek-~~~~~~ 287 (350)
.+.++.++..+|.+++.+|+.++............ +......+ . +.|..|++.+++ +| +.|+|.
T Consensus 267 ~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~AflidK~r~P~w~ 337 (379)
T PLN02874 267 KETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVIDKDNAPKWN 337 (379)
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEcCCCCCCCC
Confidence 23446788899999999999888654333222222 22333333 2 456677777776 67 777664
No 207
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=60.77 E-value=18 Score=36.09 Aligned_cols=77 Identities=9% Similarity=0.094 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECC
Q 018834 60 TNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG 139 (350)
Q Consensus 60 ~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G 139 (350)
..-..+|.++++.+...+++.+|||.=. ||-+.++ +.| +.+.+.++|+.+|.|||++|
T Consensus 169 ~~a~~~i~~al~~~~~~~~~dviii~RG------GGs~eDL------------~~F--n~e~~~rai~~~~~Pvis~i-- 226 (432)
T TIGR00237 169 EGAVQSIVESIELANTKNECDVLIVGRG------GGSLEDL------------WSF--NDEKVARAIFLSKIPIISAV-- 226 (432)
T ss_pred ccHHHHHHHHHHHhhcCCCCCEEEEecC------CCCHHHh------------hhc--CcHHHHHHHHcCCCCEEEec--
Confidence 3445667777777666555666655321 2333332 222 23468889999999999976
Q ss_pred ccccccccc---ccccCEEEEeCCe
Q 018834 140 VTMGGGAGV---SIPGTFRVACGKT 161 (350)
Q Consensus 140 ~~~GgG~~L---al~~D~riate~a 161 (350)
|-=... =+.+|.|..|+++
T Consensus 227 ---GHe~D~ti~D~vAd~ra~TPta 248 (432)
T TIGR00237 227 ---GHETDFTISDFVADLRAPTPSA 248 (432)
T ss_pred ---CcCCCccHHHHhhhccCCCcHH
Confidence 222222 2357888887753
No 208
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=58.86 E-value=27 Score=28.98 Aligned_cols=52 Identities=21% Similarity=0.328 Sum_probs=26.1
Q ss_pred HHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Q 018834 65 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT 141 (350)
Q Consensus 65 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~ 141 (350)
.+.+.++.+.+||+.++|++.-.+ .. + ..+|++ ........ ||||++.-|..
T Consensus 41 ~~~d~l~~~~~D~~t~~I~ly~E~-----~~------------d---~~~f~~----~~~~a~~~-KPVv~lk~Grt 92 (138)
T PF13607_consen 41 DFADLLEYLAEDPDTRVIVLYLEG-----IG------------D---GRRFLE----AARRAARR-KPVVVLKAGRT 92 (138)
T ss_dssp -HHHHHHHHCT-SS--EEEEEES-------S----------------HHHHHH----HHHHHCCC-S-EEEEE----
T ss_pred CHHHHHHHHhcCCCCCEEEEEccC-----CC------------C---HHHHHH----HHHHHhcC-CCEEEEeCCCc
Confidence 356778888899999999886542 00 1 122322 33444455 99999998874
No 209
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=57.82 E-value=25 Score=32.30 Aligned_cols=54 Identities=11% Similarity=0.004 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCH-HHHHHHHHHHHhhhhhccCCc
Q 018834 290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQ-GHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~-~e~l~~E~~~~~~~~~~~~~~ 345 (350)
.+.+..+++.+.+|.+++.++++++..... .++ .+.++.|.+++..++.++|.+
T Consensus 190 ~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~d~~ 244 (261)
T PRK11423 190 FTLQMAHHISEKAPLAIAVIKEQLRVLGEA--HPMNPDEFERIQGLRRAVYDSEDYQ 244 (261)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhccc--CCcchHHHHHHHHHHHHHhCChhHH
Confidence 355566788899999999999999876430 244 688999998888888877643
No 210
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=56.72 E-value=31 Score=32.88 Aligned_cols=15 Identities=33% Similarity=0.536 Sum_probs=12.5
Q ss_pred cCCCcEEEEECCccc
Q 018834 128 THLKPHVAILNGVTM 142 (350)
Q Consensus 128 ~~~kP~Ia~i~G~~~ 142 (350)
...||||+++-|..-
T Consensus 250 ~~~KPVVa~~aGrsa 264 (317)
T PTZ00187 250 PIKKPVVSFIAGITA 264 (317)
T ss_pred cCCCcEEEEEecCCC
Confidence 468999999998864
No 211
>smart00250 PLEC Plectin repeat.
Probab=56.34 E-value=9.7 Score=23.94 Aligned_cols=19 Identities=37% Similarity=0.396 Sum_probs=17.4
Q ss_pred hcCCCCCHHHHHHCCCCcc
Q 018834 195 LTGAKLNGAEMMACGLATH 213 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~ 213 (350)
-||++++-.||++.||++.
T Consensus 17 ~t~~~lsv~eA~~~glid~ 35 (38)
T smart00250 17 ETGQKLSVEEALRRGLIDP 35 (38)
T ss_pred CCCCCcCHHHHHHcCCCCc
Confidence 4899999999999999975
No 212
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=53.91 E-value=26 Score=34.88 Aligned_cols=73 Identities=10% Similarity=0.158 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Q 018834 63 GAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (350)
Q Consensus 63 ~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~ 142 (350)
..+|.++++.++..+++.++|+-= .||-+.+ .+.| +...+.++|+.++.|+|++|
T Consensus 178 ~~eIv~aI~~an~~~~~DvlIVaR------GGGSiED------------LW~F--NdE~vaRAi~~s~iPvISAV----- 232 (440)
T COG1570 178 AEEIVEAIERANQRGDVDVLIVAR------GGGSIED------------LWAF--NDEIVARAIAASRIPVISAV----- 232 (440)
T ss_pred HHHHHHHHHHhhccCCCCEEEEec------CcchHHH------------Hhcc--ChHHHHHHHHhCCCCeEeec-----
Confidence 445555555555555555554421 1333333 3333 22368889999999999987
Q ss_pred ccccccc---cccCEEEEeCC
Q 018834 143 GGGAGVS---IPGTFRVACGK 160 (350)
Q Consensus 143 GgG~~La---l~~D~riate~ 160 (350)
|--.... +.+|+|-.|++
T Consensus 233 GHEtD~tL~DfVAD~RApTPT 253 (440)
T COG1570 233 GHETDFTLADFVADLRAPTPT 253 (440)
T ss_pred ccCCCccHHHhhhhccCCCch
Confidence 2222222 34777777764
No 213
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=51.56 E-value=42 Score=31.06 Aligned_cols=39 Identities=10% Similarity=0.061 Sum_probs=31.9
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCC-CHHHHHHHHHH
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNG-GQGHCTKVEST 333 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~-~~~e~l~~E~~ 333 (350)
.+..+++...+|.+++.+++++++... . +++++++.|..
T Consensus 206 ~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~~~~~e~~ 245 (276)
T PRK05864 206 YAIAARMAGFSRPGIELTKRTLWSGLD---AASLEAHMQAEGL 245 (276)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhcc---cCCHHHHHHHHHH
Confidence 344567788999999999999998766 5 79999988865
No 214
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=50.67 E-value=40 Score=30.90 Aligned_cols=51 Identities=12% Similarity=0.118 Sum_probs=39.2
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+.+..+++.+.+|.++..+++++++... . ..+.++.|.+.+..++.+||.+
T Consensus 192 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~-~~~~~~~e~~~~~~~~~~~d~~ 242 (259)
T TIGR01929 192 TVRWCREILQKSPMAIRMLKAALNADCD---G-QAGLQELAGNATMLFYMTEEGQ 242 (259)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhc---c-chHHHHHHHHHHHHHhcCccHH
Confidence 3345677889999999999999988754 2 4566777888888888888743
No 215
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=48.45 E-value=47 Score=30.70 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=37.8
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..++++++.... .++...+.|.+.+..++.+||.
T Consensus 202 a~~~a~~la~~~~~a~~~~K~~l~~~~~----~~~~~~~~e~~~~~~~~~~~d~ 251 (273)
T PRK07396 202 TVRWCREMLQNSPMALRCLKAALNADCD----GQAGLQELAGNATMLFYMTEEA 251 (273)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhc----cHHHHHHHHHHHHHHHhcChhH
Confidence 3345577888999999999999988754 4566666788888777777663
No 216
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=48.09 E-value=17 Score=32.69 Aligned_cols=42 Identities=10% Similarity=0.057 Sum_probs=35.4
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKF 335 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~ 335 (350)
+.+..+.+.+.+|.++..++++++.... .++.+.++.|.+.+
T Consensus 187 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~~~~~~ 228 (229)
T PRK06213 187 AQAAARELAGLNMGAHAATKLKVRAAAL---EAIRAAIEGDAAEF 228 (229)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHH---HHHHhchhhhhhhc
Confidence 3445567788999999999999998877 78999999998876
No 217
>PRK14053 methyltransferase; Provisional
Probab=47.37 E-value=27 Score=30.36 Aligned_cols=68 Identities=15% Similarity=0.185 Sum_probs=46.8
Q ss_pred cEEEEEeCCEEEEEEcCCCC---CCCCCHHHHH---HHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHH
Q 018834 35 QVLVEGKANSRMAILNRPSA---LNALNTNMGA---KLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYH 102 (350)
Q Consensus 35 ~v~~~~~~~v~~ItLnrp~~---~Nal~~~m~~---~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~ 102 (350)
.+.-+.+..|+++||...-. .-|+.-.... .+++.+..+-.||++|.+||+|.. +..-+|.-|..+++
T Consensus 15 Y~vG~~~S~VAVvTL~S~~~~~~gaAI~G~c~TENlGIEKvI~NvisNpNIRflilcG~Ev~GHltGqsL~aL~~ 89 (194)
T PRK14053 15 YTVGNPESRIAVVTLASSIESFPEAAIWGSSKTENLGVEKIIVNVISNSNIRYVLLCGGESRGHLAGHSLLAIHA 89 (194)
T ss_pred EEeCCCCCcEEEEEccccccccCCceEEeeccccccCHHHHHHHhhcCCCceEEEEecCccCCccccHHHHHHHH
Confidence 34444556788998865321 1223322222 377888888999999999999987 78888887777765
No 218
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=46.39 E-value=29 Score=29.40 Aligned_cols=62 Identities=16% Similarity=0.184 Sum_probs=34.7
Q ss_pred HHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccc
Q 018834 65 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMG 143 (350)
Q Consensus 65 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~G 143 (350)
...++|+....||++++|++.+.+.. +--.+ .+..+......... ...+||+|+.+-|..--
T Consensus 60 ~~~~~l~~~~~Dp~v~vIlvd~~~G~----g~~~~-----------~A~~l~~a~~~~~~--~~~~~pvVa~v~GT~~d 121 (153)
T PF00549_consen 60 TRNEALEIEAADPEVKVILVDIVGGI----GSCED-----------PAAGLIPAIKEAKA--EGRKKPVVARVCGTNAD 121 (153)
T ss_dssp HHHHHHHHHHTSTTESEEEEEEESSS----SSHHH-----------HHHHHHHHHSHCTH--TTT-SEEEEEEESTTCH
T ss_pred HHHHHHHHHhcCCCccEEEEEecccc----CchHH-----------HHHHHHHHHHhccc--cCCCCcEEEEeeeecCC
Confidence 35567777889999999999864321 11111 11122221111100 34789999999887644
No 219
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=46.34 E-value=36 Score=33.83 Aligned_cols=38 Identities=8% Similarity=0.107 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCCcEEEEECCcccccccc---cccccCEEEEeCCe
Q 018834 119 LYSFIYLLGTHLKPHVAILNGVTMGGGAG---VSIPGTFRVACGKT 161 (350)
Q Consensus 119 ~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~---Lal~~D~riate~a 161 (350)
.+.+..+|+.+|.|||++| |-=.. .=+.||.|..|+++
T Consensus 213 ~e~v~~ai~~~~~Pvis~I-----GHE~D~tl~D~vAd~ra~TPta 253 (438)
T PRK00286 213 DEAVARAIAASRIPVISAV-----GHETDFTIADFVADLRAPTPTA 253 (438)
T ss_pred cHHHHHHHHcCCCCEEEec-----cCCCCccHHHHhhhccCCChHH
Confidence 3578889999999999976 11122 23457888888754
No 220
>PRK08321 naphthoate synthase; Validated
Probab=45.94 E-value=43 Score=31.57 Aligned_cols=50 Identities=8% Similarity=-0.029 Sum_probs=37.6
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+.+.+.+|.+++.++++++.... .+.+....|.+.+..++.++|.
T Consensus 231 a~~~a~~la~~~~~a~~~~K~~l~~~~~----~~~~~~~~e~~~~~~~~~~~d~ 280 (302)
T PRK08321 231 ALEWAREINGKSPTAMRMLKYAFNLTDD----GLVGQQLFAGEATRLAYMTDEA 280 (302)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhhhc----ccHHHHHHHHHHHHHHhcCHHH
Confidence 4455677889999999999999988755 3444455688888887777663
No 221
>PLN02522 ATP citrate (pro-S)-lyase
Probab=45.71 E-value=48 Score=34.56 Aligned_cols=14 Identities=36% Similarity=0.401 Sum_probs=12.6
Q ss_pred CCCcEEEEECCccc
Q 018834 129 HLKPHVAILNGVTM 142 (350)
Q Consensus 129 ~~kP~Ia~i~G~~~ 142 (350)
..||||+++-|.+-
T Consensus 249 ~~KPVVa~kaGrsa 262 (608)
T PLN02522 249 VSKPVVAWVSGTCA 262 (608)
T ss_pred CCCCEEEEeccCCC
Confidence 68999999999876
No 222
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=45.34 E-value=7.2 Score=25.60 Aligned_cols=19 Identities=32% Similarity=0.408 Sum_probs=16.5
Q ss_pred hcCCCCCHHHHHHCCCCcc
Q 018834 195 LTGAKLNGAEMMACGLATH 213 (350)
Q Consensus 195 ltG~~l~a~eA~~~GLv~~ 213 (350)
-||++++-++|++.||+|.
T Consensus 17 ~tg~~lsv~~A~~~glId~ 35 (45)
T PF00681_consen 17 ETGERLSVEEAIQRGLIDS 35 (45)
T ss_dssp TTTEEEEHHHHHHTTSS-H
T ss_pred CCCeEEcHHHHHHCCCcCH
Confidence 5789999999999999976
No 223
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=44.23 E-value=54 Score=29.90 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=35.9
Q ss_pred CcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834 302 SPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS 345 (350)
Q Consensus 302 sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~ 345 (350)
+|.++..+++.++.+.. .++++.++.|...+.....++|.+
T Consensus 204 ~~~a~~~~k~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~d~~ 244 (257)
T COG1024 204 PPLALAATKRLVRAALE---ADLAEALEAEALAFARLFSSEDFR 244 (257)
T ss_pred CHHHHHHHHHHHHHhhh---ccHHHHHHHHHHHHHHHhcChhHH
Confidence 99999999999999988 679999999999999876676643
No 224
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=43.12 E-value=96 Score=23.60 Aligned_cols=49 Identities=8% Similarity=0.038 Sum_probs=35.2
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC
Q 018834 35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88 (350)
Q Consensus 35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g 88 (350)
.+.++..+++.+|++..+ ++......+.+.+..+..++..+.|++.-.+
T Consensus 4 ~i~~~~~~~~~vi~~~G~-----l~~~~~~~~~~~l~~~~~~~~~~~vvidls~ 52 (108)
T TIGR00377 4 NIETEVQEGVVIVRLSGE-----LDAHTAPLLREKVTPAAERTGPRPIVLDLED 52 (108)
T ss_pred EEEEEEECCEEEEEEecc-----cccccHHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 467788899999999742 5555566777777666554567888887766
No 225
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=42.29 E-value=99 Score=24.79 Aligned_cols=55 Identities=15% Similarity=0.231 Sum_probs=35.0
Q ss_pred HHHHHhccCCHHHHHHHHHHHhccCCCCcchHHH-HHHHHHHhcC-cCCHHHHHHHH
Q 018834 225 EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-RIDIVDKCFG-LDTVEEIIDSL 279 (350)
Q Consensus 225 ~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~i~~~f~-~~~~~ei~~~l 279 (350)
+.+..+...+|.++..+.+.+............. +.....+++. .|..|++.+.|
T Consensus 35 ~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~~~~DF~EGVRA~L 91 (118)
T PF13766_consen 35 KTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCMRHPDFAEGVRALL 91 (118)
T ss_dssp HHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHHCCSCHHHHHHHHT
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3445667789999999999998876544443333 4556666664 56666666666
No 226
>TIGR01111 mtrA N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A. coenzyme M methyltransferase subunit A in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase (encoded by subunit A) is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of methyl-coenzyme M by another enzyme, methyl-coenzyme M reductase.
Probab=41.65 E-value=36 Score=30.56 Aligned_cols=69 Identities=17% Similarity=0.225 Sum_probs=46.9
Q ss_pred CcEEEEEeCCEEEEEEcCCCCC-------CCCCHHHHH---HHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSAL-------NALNTNMGA---KLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYH 102 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~-------Nal~~~m~~---~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~ 102 (350)
+.+.-+.+..|+++||...... -|+.-.... .+++.+..+-.||++|.+||+|.. +..-+|.-+..+++
T Consensus 17 dY~vGd~~SpVAV~TL~Sh~~~~~i~~agaAI~G~~~TENlGIEKvIaNvisNpNIRflilcG~Ev~GHltGqsL~aLh~ 96 (238)
T TIGR01111 17 EYVVGDPESPVLVVTLGSHIEEQIILDAGAAIAGPCKTENLGIEKVVANIISNPNIRFLILCGSEVQGHITGQSFKALHE 96 (238)
T ss_pred eeEecCCCCceEEEEccccccccchhhcCceeeccccccccCHHHHHHHHhcCCCceEEEEecCcccCccccHHHHHHHH
Confidence 3445555678999999754321 112222222 377888888999999999999987 78888876666653
No 227
>PRK00964 tetrahydromethanopterin S-methyltransferase subunit A; Provisional
Probab=41.47 E-value=36 Score=30.57 Aligned_cols=69 Identities=17% Similarity=0.238 Sum_probs=46.7
Q ss_pred CcEEEEEeCCEEEEEEcCCCC-------CCCCCHHHHH---HHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHH
Q 018834 34 NQVLVEGKANSRMAILNRPSA-------LNALNTNMGA---KLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYH 102 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~-------~Nal~~~m~~---~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~ 102 (350)
+.+.-+.+..|+++||..... .-|+.-.... .|++.+..+-.||++|.+||+|.. +..-+|--|..+++
T Consensus 17 dY~vGd~~SpVAV~Tl~S~~~~~~~~~agaAi~G~~~TENlGIEKvI~NvisNpNIRflilcG~Ev~GH~tGqsl~aL~~ 96 (225)
T PRK00964 17 DYVVGDPESPVAVVTLGSHLLDQPIIDAGAAISGPCHTENLGIEKVIANVISNPNIRFLILCGSEVQGHITGQSLKALHE 96 (225)
T ss_pred eeEeCCCCCceEEEEccccccccchhhcCceeecccccccccHHHHHHHHhcCCCceEEEEecCccCCccccHHHHHHHH
Confidence 344445566799999975431 1222222222 377888889999999999999987 77777766666553
No 228
>PF04208 MtrA: Tetrahydromethanopterin S-methyltransferase, subunit A ; InterPro: IPR013340 This domain is mostly found in N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit A (MtrA) in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. 5-methyl-5,6,7,8-tetrahydromethanopterin + 2-mercaptoethanesulphonate = 5,6,7,8-tetrahydromethanopterin + 2-(methylthio)ethanesulphonate. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase (encoded by subunit A) is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of methyl-coenzyme M by another enzyme, methyl-coenzyme M reductase. In some organisms this domain is found at the N-terminal region of what appears to be a fusion of the MtrA and MtrF proteins [, ]. The function of these proteins is unknown, though it is likely that they are involved in C1 metabolism. ; GO: 0008168 methyltransferase activity, 0030269 tetrahydromethanopterin S-methyltransferase activity
Probab=40.81 E-value=34 Score=29.48 Aligned_cols=68 Identities=18% Similarity=0.271 Sum_probs=44.2
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCC------HHHH---HHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHH
Q 018834 34 NQVLVEGKANSRMAILNRPSALNALN------TNMG---AKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLY 101 (350)
Q Consensus 34 ~~v~~~~~~~v~~ItLnrp~~~Nal~------~~m~---~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~ 101 (350)
+.+.-+.+..|+++||........+. -... ..+.+.+..+-.||+||.+||+|.. +..-+|--|..++
T Consensus 14 dY~vGdp~S~VAV~TL~S~~~~~~l~~gaAI~G~~~TENlGIEKvI~NvisNpnIRflilcG~Ev~GH~~Gqsl~aLh 91 (176)
T PF04208_consen 14 DYVVGDPESPVAVCTLGSHLLQAPLDAGAAIAGPCKTENLGIEKVIANVISNPNIRFLILCGSEVKGHLTGQSLLALH 91 (176)
T ss_pred ceEECCCCCCEEEEECccccchhhhhcCceeeecccccccCHHHHHHHHhcCCCceEEEEecCccCCCcchHHHHHHH
Confidence 34444556679999997543211111 1111 1377888889999999999999986 6677776555554
No 229
>cd07560 Peptidase_S41_CPP C-terminal processing peptidase; serine protease family S41. The C-terminal processing peptidase (CPP, EC 3.4.21.102) also known as tail-specific protease (tsp), the photosystem II D1 C-terminal processing protease (D1P), and other related S41 protease family members are present in this CD. CPP is synthesized as a precursor form with a carboxyl-terminal extension. It specifically recognizes a C-terminal tripeptide, Xaa-Yaa-Zaa, in which Xaa is preferably Ala or Leu, Yaa is preferably Ala or Tyr and Zaa is preferably Ala, but then cleaves at a variable distance from the C-terminus. The C-terminal carboxylate group is essential, and proteins where this group is amidated are not substrates. This family of proteases contains the PDZ domain that promotes protein-protein interactions and is important for substrate recognition. The active site consists of a serine/lysine catalytic dyad. The bacterial CCP-1 is believed to be important for the degradation of incorrectl
Probab=36.45 E-value=54 Score=29.17 Aligned_cols=95 Identities=15% Similarity=0.060 Sum_probs=52.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhH---HHhhhcCChHHHHHHHHHH-
Q 018834 44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSL---YHFMNQGKLEECKDFFRTL- 119 (350)
Q Consensus 44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~---~~~~~~~~~~~~~~~~~~~- 119 (350)
|++|.++. |+....+++.++++++... +++.+||.=. ++.||++... ............... +..
T Consensus 50 igYi~i~s------f~~~~~~~~~~~l~~~~~~-~~~~lIlDLR---~N~GG~~~~~~~i~~~f~~~~~~~~~~~-~~g~ 118 (211)
T cd07560 50 IGYIRITS------FSENTAEELKKALKELKKQ-GMKGLILDLR---NNPGGLLDEAVEIADLFLPGGPIVSTKG-RNGK 118 (211)
T ss_pred eEEEEEcc------cCchhHHHHHHHHHHHHhc-cCceEEEEcC---CCCCCCHHHHHHHHHHhcCCCeEEEEEe-cCCc
Confidence 88888853 5567788999999988765 4788887644 4566665432 111111110000000 000
Q ss_pred HHHH--HHHhcCCCcEEEEECCcccccccccc
Q 018834 120 YSFI--YLLGTHLKPHVAILNGVTMGGGAGVS 149 (350)
Q Consensus 120 ~~l~--~~i~~~~kP~Ia~i~G~~~GgG~~La 149 (350)
.... ..-..+.+|++.++|+.+.+++=.++
T Consensus 119 ~~~~~~~~~~~~~~pvvVLvn~~TaSaaE~~a 150 (211)
T cd07560 119 REAYASDDGGLYDGPLVVLVNGGSASASEIVA 150 (211)
T ss_pred eEEEecCCCccCCCCEEEEeCCCcccHHHHHH
Confidence 0000 00014689999999999987764333
No 230
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=33.79 E-value=1.8e+02 Score=22.54 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=39.5
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCC--------ceEEEEEcCC
Q 018834 36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPN--------IGFVSMKGSG 88 (350)
Q Consensus 36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~--------v~~vvl~g~g 88 (350)
+.++..+++.+++++.| |+......+.+.+..+..... ++.|||.-.+
T Consensus 2 ~~~~~~~~v~ii~~~g~-----l~f~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vIlD~s~ 57 (117)
T PF01740_consen 2 IEIETHDGVLIIRLDGP-----LFFANAEEFRDRIRKLIDEDPERIKKRQTIKNVILDMSG 57 (117)
T ss_dssp CEEEEETTEEEEEEESE-----ESHHHHHHHHHHHHHHHCCSSS--HTSSSSSEEEEEETT
T ss_pred CeeEEECCEEEEEEeeE-----EEHHHHHHHHHHHHHhhhcccccccccccceEEEEEEEe
Confidence 35678899999999865 888889999999988877665 7899998765
No 231
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=32.65 E-value=79 Score=28.99 Aligned_cols=46 Identities=15% Similarity=0.206 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHG 343 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~ 343 (350)
+.+..+++.+.+|.++..+++.++.+.. .++++ |.+.+..++.+|+
T Consensus 198 a~~~a~~i~~~~~~a~~~~K~~l~~~~~---~~l~~----~~~~~~~~~~~~~ 243 (262)
T PRK06144 198 ADALAELLAAHAPLTLRATKEALRRLRR---EGLPD----GDDLIRMCYMSED 243 (262)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhh---cCHHH----HHHHHHHHhcChH
Confidence 4455677889999999999999988766 55544 4445555555554
No 232
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=31.89 E-value=2.3e+02 Score=21.49 Aligned_cols=47 Identities=11% Similarity=0.091 Sum_probs=33.3
Q ss_pred EEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC
Q 018834 37 LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88 (350)
Q Consensus 37 ~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g 88 (350)
.++..+++.++.++-| |+..-..++.+.+..+-..+..+.|+|.-++
T Consensus 2 ~~~~~~~~~vi~l~G~-----L~f~~~~~~~~~l~~~~~~~~~~~vilDls~ 48 (106)
T TIGR02886 2 EFEVKGDVLIVRLSGE-----LDHHTAERVRRKIDDAIERRPIKHLILNLKN 48 (106)
T ss_pred eEEEECCEEEEEEecc-----cchhhHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4577889999999654 5666667777777665433457888887765
No 233
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=30.96 E-value=4.7e+02 Score=24.79 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=73.4
Q ss_pred cCCCCcEEEEEeCCE--EEEEEcCCCCCCCCCHHHHHHHHHHH-HHHHcCCCceEEEEEcC-CCccccCCC-hhhHHH--
Q 018834 30 DDLCNQVLVEGKANS--RMAILNRPSALNALNTNMGAKLNKLF-KAWENDPNIGFVSMKGS-GRAFCAGGD-IVSLYH-- 102 (350)
Q Consensus 30 ~~~~~~v~~~~~~~v--~~ItLnrp~~~Nal~~~m~~~L~~~l-~~~~~d~~v~~vvl~g~-g~~F~aG~D-l~~~~~-- 102 (350)
.+..+.|.+-.++++ +-=.|..+..+|.++.+-+.+-...+ .++...+.-++.||-|. .+.|--+-+ ...+..
T Consensus 95 ~~~FDlvi~p~HD~~~~~~Nvl~t~ga~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l 174 (311)
T PF06258_consen 95 PRPFDLVIVPEHDRLPRGPNVLPTLGAPNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQL 174 (311)
T ss_pred ccccCEEEECcccCcCCCCceEecccCCCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHH
Confidence 455666776555554 11011122346999999888766665 44555566666666654 466654433 122211
Q ss_pred --hhhcC-----------ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEeccc--
Q 018834 103 --FMNQG-----------KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE-- 167 (350)
Q Consensus 103 --~~~~~-----------~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe-- 167 (350)
..... ++......++ ..+. +.|.+..++|.--+-=.++...||.+++|+++.=-+.|
T Consensus 175 ~~~~~~~~~~~~vttSRRTp~~~~~~L~------~~~~--~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA~ 246 (311)
T PF06258_consen 175 AALAAAYGGSLLVTTSRRTPPEAEAALR------ELLK--DNPGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEAA 246 (311)
T ss_pred HHHHHhCCCeEEEEcCCCCcHHHHHHHH------Hhhc--CCCceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHHH
Confidence 11111 1122222211 1111 34555555766666667788889999999987433333
Q ss_pred ---ccccccCCCc
Q 018834 168 ---TLIGFHPDAG 177 (350)
Q Consensus 168 ---~~iGl~P~~G 177 (350)
..+++++-.+
T Consensus 247 ~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 247 ATGKPVYVLPLPG 259 (311)
T ss_pred HcCCCEEEecCCC
Confidence 3455555443
No 234
>PLN02921 naphthoate synthase
Probab=30.69 E-value=1.1e+02 Score=29.23 Aligned_cols=48 Identities=10% Similarity=0.062 Sum_probs=32.8
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccC
Q 018834 292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHG 343 (350)
Q Consensus 292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~ 343 (350)
.+..+++.+.+|.++..++++++.+.. . .....+.|...+..++.++|
T Consensus 257 ~~~a~~la~~~p~al~~~K~~l~~~~~---~-~~~~~~~~~~~~~~~~~s~d 304 (327)
T PLN02921 257 VKWCREILRNSPTAIRVLKSALNAADD---G-HAGLQELGGNATLLFYGSEE 304 (327)
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhhc---c-hhHHHHHHHHHHHHHhcCHH
Confidence 344567888999999999999998765 3 33333444466666666554
No 235
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=29.71 E-value=70 Score=31.54 Aligned_cols=37 Identities=22% Similarity=0.421 Sum_probs=23.8
Q ss_pred cccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHh
Q 018834 91 FCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 127 (350)
Q Consensus 91 F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 127 (350)
||.|||+..+......-.......|..++-.....|+
T Consensus 90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7999999988765433344555666666555544444
No 236
>PF14842 FliG_N: FliG N-terminal domain; PDB: 3HJL_A 3AJC_A 3USY_B.
Probab=29.70 E-value=74 Score=25.03 Aligned_cols=85 Identities=22% Similarity=0.300 Sum_probs=41.8
Q ss_pred HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccC----CCCcchHHHHHHHHHH
Q 018834 190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLV----YPDKNSVIHRIDIVDK 265 (350)
Q Consensus 190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~i~~ 265 (350)
|..|+..|+...++=. ...+++++..+...+.++-..++..+...++.|.... ..........+..+.+
T Consensus 12 AilLl~Lgee~Aa~vl-------k~l~~~ei~~i~~~ma~l~~v~~~~~~~Vl~EF~~~~~~~~~~~~gg~~~~~~lL~~ 84 (108)
T PF14842_consen 12 AILLLALGEEAAAEVL-------KHLDEEEIERISREMAKLGSVSPEEVEEVLEEFYDEIRAQGGIVSGGRDFARRLLEK 84 (108)
T ss_dssp HHHHHHS-HHHHHHHH-------HHS-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHTT---S-HHHHHHH-HHH
T ss_pred HHHHHHHCHHHHHHHH-------ccCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHccccccChHHHHHHHHHH
Confidence 5556555554433322 2356667777888888888888888888887776522 1112223334778888
Q ss_pred hcCcCCHHHHHHHHhc
Q 018834 266 CFGLDTVEEIIDSLES 281 (350)
Q Consensus 266 ~f~~~~~~ei~~~lek 281 (350)
.|+.+..+++++.+..
T Consensus 85 alg~~~a~~il~~~~~ 100 (108)
T PF14842_consen 85 ALGEEKAKEILDRLEQ 100 (108)
T ss_dssp HS---HHHHH------
T ss_pred HCCHHHHHHHHHHHhc
Confidence 9999999998888764
No 237
>TIGR00225 prc C-terminal peptidase (prc). A C-terminal peptidase with different substrates in different species including processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein in E.coli E.coli and H influenza have the most distal branch of the tree and their proteins have an N-terminal 200 amino acids that show no homology to other proteins in the database.
Probab=27.30 E-value=75 Score=30.31 Aligned_cols=94 Identities=11% Similarity=0.021 Sum_probs=53.0
Q ss_pred CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhH---HHhhhcCCh-------HHH
Q 018834 43 NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSL---YHFMNQGKL-------EEC 112 (350)
Q Consensus 43 ~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~---~~~~~~~~~-------~~~ 112 (350)
.|++|.++. |+.....++.++++.++.. +++.+||.=. +..||++... ...+..... ...
T Consensus 152 ~igYi~i~~------f~~~~~~~~~~~l~~l~~~-~~~~lIiDLR---~N~GG~~~~a~~~a~~f~~~~~~~~~~~~~g~ 221 (334)
T TIGR00225 152 SVGYIRISS------FSEHTTEDVKKALDKLEKK-NAKGYILDLR---GNPGGLLQSAVDISRLFITKGPIVQTKDRNGS 221 (334)
T ss_pred EEEEEEEEe------cccchHHHHHHHHHHHHhc-cCceEEEEcC---CCCCCCHHHHHHHHHHhcCCCcEEEEEcCCCc
Confidence 488888853 5556678888888887653 5788887644 5566666542 111111110 000
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccc
Q 018834 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIP 151 (350)
Q Consensus 113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~ 151 (350)
...+. . ..-..+.+|++.++|+.+..++=.++.+
T Consensus 222 ~~~~~----~-~~~~~~~~pv~vLvn~~TaSaaE~~a~~ 255 (334)
T TIGR00225 222 KRHYK----A-NGRQPYNLPLVVLVNRGSASASEIFAGA 255 (334)
T ss_pred ceEEe----c-CCCccCCCCEEEEECCCCCcHHHHHHHH
Confidence 00000 0 0011467999999999998777444443
No 238
>KOG1255 consensus Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=26.52 E-value=78 Score=28.97 Aligned_cols=56 Identities=27% Similarity=0.455 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Q 018834 66 LNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (350)
Q Consensus 66 L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~ 142 (350)
+.++|+.+-.|++.+.||+-|.= |+. ..+++.+|+... .-..-+||||++|-|...
T Consensus 219 FID~L~vFl~D~~t~GIiliGEI-----GG~-----------AEe~AA~flk~~-----nSg~~~kPVvsFIAG~tA 274 (329)
T KOG1255|consen 219 FIDCLEVFLEDPETEGIILIGEI-----GGS-----------AEEEAAEFLKEY-----NSGSTAKPVVSFIAGVTA 274 (329)
T ss_pred HHHHHHHHhcCcccceEEEEecc-----CCh-----------hhHHHHHHHHHh-----ccCCCCCceeEEeecccC
Confidence 45667777788999999998861 111 112334444321 123468999999988753
No 239
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=26.44 E-value=1.5e+02 Score=28.09 Aligned_cols=13 Identities=46% Similarity=0.654 Sum_probs=11.2
Q ss_pred CCcEEEEECCccc
Q 018834 130 LKPHVAILNGVTM 142 (350)
Q Consensus 130 ~kP~Ia~i~G~~~ 142 (350)
.||||++.-|..-
T Consensus 233 ~KPVV~lk~Grs~ 245 (300)
T PLN00125 233 EKPVVAFIAGLTA 245 (300)
T ss_pred CCCEEEEEecCCC
Confidence 8999999988763
No 240
>PLN00049 carboxyl-terminal processing protease; Provisional
Probab=25.65 E-value=1e+02 Score=30.12 Aligned_cols=98 Identities=10% Similarity=0.062 Sum_probs=52.6
Q ss_pred CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhh---HHHhhhcCCh-HHHH--HH
Q 018834 42 ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS---LYHFMNQGKL-EECK--DF 115 (350)
Q Consensus 42 ~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~---~~~~~~~~~~-~~~~--~~ 115 (350)
++|++|.+ +.|+.....++.++++.++.. +++.+||.=. ...||++.. +......... .... .-
T Consensus 194 ~~IgYi~i------~~F~~~~~~~~~~~l~~l~~~-~~~glIlDLR---~N~GG~~~~a~~ia~~f~~~~~~~~~~~~~~ 263 (389)
T PLN00049 194 PKIGYIKL------TTFNQNASSAVKEAIETLRAN-GVDAFVLDLR---DNSGGLFPAGIEIAKLWLDKGVIVYIADSRG 263 (389)
T ss_pred CCEEEEEe------ccccchhHHHHHHHHHHHHHC-CCCEEEEEcC---CCCCCCHHHHHHHHHHhcCCCcEEEEecCCC
Confidence 47889888 346667788899999998765 5788877643 334555543 2221111110 0000 00
Q ss_pred HHHHHHHHHH-HhcCCCcEEEEECCcccccccccc
Q 018834 116 FRTLYSFIYL-LGTHLKPHVAILNGVTMGGGAGVS 149 (350)
Q Consensus 116 ~~~~~~l~~~-i~~~~kP~Ia~i~G~~~GgG~~La 149 (350)
....+..... .....+|++.++|+.+..++=.++
T Consensus 264 ~~~~~~~~~~~~~~~~~PvvVLvn~~TaSasEi~a 298 (389)
T PLN00049 264 VRDIYDADGSSAIATSEPLAVLVNKGTASASEILA 298 (389)
T ss_pred ceeEEecCCCccccCCCCEEEEECCCCccHHHHHH
Confidence 0000000000 113468999999999877764333
No 241
>PF03464 eRF1_2: eRF1 domain 2; InterPro: IPR005141 This domain is found in the release factor eRF1 which terminates protein biosynthesis by recognizing stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known []. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site []. This domain is also found in other proteins which may also be involved in translation termination ; PDB: 3AGK_A 2VGN_A 2VGM_A 3J16_A 3IZQ 3IR9_A 3OBW_A 3MCA_B 2QI2_A 3E1Y_D ....
Probab=24.45 E-value=1.3e+02 Score=24.47 Aligned_cols=45 Identities=13% Similarity=0.169 Sum_probs=30.4
Q ss_pred EEEEEEcCCCCCCCC--C----------HHHHHHHHHHHHHH--HcCCCceEEEEEcCC
Q 018834 44 SRMAILNRPSALNAL--N----------TNMGAKLNKLFKAW--ENDPNIGFVSMKGSG 88 (350)
Q Consensus 44 v~~ItLnrp~~~Nal--~----------~~m~~~L~~~l~~~--~~d~~v~~vvl~g~g 88 (350)
+..|+.+-|.|...= + .....++.+.+.+. -..+.++.|||.|.|
T Consensus 25 ~~~i~~~ip~K~~~Gg~s~~rf~r~~~~~~f~~~i~~~l~~~f~~~~~~~~~iIiaGPG 83 (133)
T PF03464_consen 25 LQRIESNIPGKHKKGGQSQRRFEREKALEKFFKEIAEALKKYFLVNFDDVKCIIIAGPG 83 (133)
T ss_dssp EEEEE-GHCCCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHTTTCSEEEEEEST
T ss_pred EEEEEecCCCccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccEEEEECCH
Confidence 356777888887542 2 25566667777766 556789999999874
No 242
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=24.36 E-value=1.5e+02 Score=27.22 Aligned_cols=42 Identities=7% Similarity=-0.083 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHH
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVES 332 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~ 332 (350)
+.+..+++.+.+|.+++.++++++........++++.+..|.
T Consensus 201 a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~ 242 (268)
T PRK07327 201 ALEVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEF 242 (268)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 444567888999999999999998763200035777777664
No 243
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=24.35 E-value=2e+02 Score=26.87 Aligned_cols=50 Identities=16% Similarity=0.211 Sum_probs=33.4
Q ss_pred HHHHHHHhc-CcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834 293 STLRLLKEA-SPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 293 ~~l~~~~~~-sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~ 344 (350)
+..+++.+. +|.++..+++++++.... ...+... ..|...+..++.++|.
T Consensus 210 ~~a~~i~~~~~~~a~~~~K~~l~~~~~~-~~~~~~~-~~e~~~~~~~~~~~d~ 260 (296)
T PRK08260 210 ALAREIADNTSPVSVALTRQMMWRMAGA-DHPMEAH-RVDSRAIYSRGRSGDG 260 (296)
T ss_pred HHHHHHHhcCChHHHHHHHHHHHhcccC-CCcHHHH-HHHHHHHHHHccChhH
Confidence 344566664 899999999999987430 0234444 5677777777776653
No 244
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=24.35 E-value=1.8e+02 Score=25.20 Aligned_cols=38 Identities=16% Similarity=0.325 Sum_probs=28.6
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEE
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMK 85 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~ 85 (350)
-++.|+.|- +.||......+.+.+.++..+ ...+|+++
T Consensus 154 ~llllDEPt--~~LD~~~~~~~~~~l~~~~~~-~~tvi~~s 191 (211)
T cd03225 154 DILLLDEPT--AGLDPAGRRELLELLKKLKAE-GKTIIIVT 191 (211)
T ss_pred CEEEEcCCc--ccCCHHHHHHHHHHHHHHHHc-CCEEEEEe
Confidence 467789885 899999999999999988764 44444433
No 245
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=23.95 E-value=1.6e+02 Score=29.31 Aligned_cols=65 Identities=22% Similarity=0.310 Sum_probs=39.6
Q ss_pred cccCCChhhHHHhhhcCC-hHHHHHHHHHHH-HHHHH------HhcCCCcE--EEEECCcccccccccccccCEE
Q 018834 91 FCAGGDIVSLYHFMNQGK-LEECKDFFRTLY-SFIYL------LGTHLKPH--VAILNGVTMGGGAGVSIPGTFR 155 (350)
Q Consensus 91 F~aG~Dl~~~~~~~~~~~-~~~~~~~~~~~~-~l~~~------i~~~~kP~--Ia~i~G~~~GgG~~Lal~~D~r 155 (350)
||.|||+..+.+...... .+...+|+..+- -.... +++-=||- ..-=+|+.|=.=+.|++-|+.+
T Consensus 158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 899999999876532221 233444444321 11111 22334664 4445799999999999999653
No 246
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=23.89 E-value=1.8e+02 Score=25.34 Aligned_cols=39 Identities=13% Similarity=0.433 Sum_probs=29.2
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEE
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMK 85 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~ 85 (350)
-++.||.|- +.||......+.+.+.++..+....+|+++
T Consensus 160 ~lllLDEP~--~~LD~~~~~~l~~~l~~~~~~~~~tii~~s 198 (218)
T cd03255 160 KIILADEPT--GNLDSETGKEVMELLRELNKEAGTTIVVVT 198 (218)
T ss_pred CEEEEcCCc--ccCCHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 467789985 899999999999999998764344444433
No 247
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=23.80 E-value=1.8e+02 Score=29.10 Aligned_cols=53 Identities=19% Similarity=0.359 Sum_probs=33.0
Q ss_pred HHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCccc
Q 018834 65 KLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142 (350)
Q Consensus 65 ~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~ 142 (350)
.+.+.++.+.+||+.++|++...+ + ....+|++ ..++... .||||++.-|..-
T Consensus 190 ~~~d~l~~l~~D~~t~~I~ly~E~--------~------------~~~~~f~~----aa~~a~~-~KPVv~~k~Grs~ 242 (447)
T TIGR02717 190 DESDLLEYLADDPDTKVILLYLEG--------I------------KDGRKFLK----TAREISK-KKPIVVLKSGTSE 242 (447)
T ss_pred CHHHHHHHHhhCCCCCEEEEEecC--------C------------CCHHHHHH----HHHHHcC-CCCEEEEecCCCh
Confidence 456777777778888888776542 0 01122322 3333444 8999999998864
No 248
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=23.29 E-value=2e+02 Score=26.09 Aligned_cols=39 Identities=10% Similarity=0.367 Sum_probs=32.2
Q ss_pred EEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcC
Q 018834 46 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS 87 (350)
Q Consensus 46 ~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~ 87 (350)
++-++.|- .|||++|+.+..+.+..+..+ ...-|++|=.
T Consensus 157 vmLFDEPT--SALDPElv~EVL~vm~~LA~e-GmTMivVTHE 195 (240)
T COG1126 157 VMLFDEPT--SALDPELVGEVLDVMKDLAEE-GMTMIIVTHE 195 (240)
T ss_pred EEeecCCc--ccCCHHHHHHHHHHHHHHHHc-CCeEEEEech
Confidence 46688886 799999999999999999876 5677777753
No 249
>PRK08788 enoyl-CoA hydratase; Validated
Probab=22.52 E-value=2.5e+02 Score=26.21 Aligned_cols=47 Identities=11% Similarity=0.043 Sum_probs=33.5
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccC
Q 018834 293 STLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHG 343 (350)
Q Consensus 293 ~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~ 343 (350)
+..+++... |.+.....+..+.... .+++++++.|......++...+
T Consensus 218 ~~a~~ia~~-~~~~~a~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 264 (287)
T PRK08788 218 TFIRKSKRK-LNGWRAMLRARRRVNP---LSLEELMDITEIWVDAALQLEE 264 (287)
T ss_pred HHHHHHhcC-ccHHHHHHHHHHhhcc---CCHHHHHHHHHHHHHHHhhccc
Confidence 344555655 7777776777777776 7899999999888776666544
No 250
>PRK06091 membrane protein FdrA; Validated
Probab=22.44 E-value=2.4e+02 Score=29.18 Aligned_cols=23 Identities=30% Similarity=0.329 Sum_probs=15.9
Q ss_pred HHHHHHhcCCCcEEEEECCcccc
Q 018834 121 SFIYLLGTHLKPHVAILNGVTMG 143 (350)
Q Consensus 121 ~l~~~i~~~~kP~Ia~i~G~~~G 143 (350)
++........||||++.-|..--
T Consensus 270 ~fl~aar~~~KPVVvlk~Grs~~ 292 (555)
T PRK06091 270 KIINAMKATGKPVVALFLGYTPA 292 (555)
T ss_pred HHHHHHhhCCCCEEEEEecCCch
Confidence 34444445699999999986543
No 251
>smart00870 Asparaginase Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The enzyme is effective in the treatment of human malignant lymphomas, which have a diminished capacity to produce asparagine synthetase: in order to survive, such cells absorb asparagine from blood plasma PUBMED:2407723, PUBMED:3379033 - if Asn levels have been depleted by injection of asparaginase, the lymphoma cells die.
Probab=22.20 E-value=3.2e+02 Score=25.94 Aligned_cols=32 Identities=19% Similarity=0.081 Sum_probs=22.7
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEE-EEEcC
Q 018834 56 NALNTNMGAKLNKLFKAWENDPNIGFV-SMKGS 87 (350)
Q Consensus 56 Nal~~~m~~~L~~~l~~~~~d~~v~~v-vl~g~ 87 (350)
.-++.+.+.+|.+.+++.-+++++..| |+.|+
T Consensus 55 s~~t~~~w~~la~~i~~~~~~~~~dG~VVtHGT 87 (323)
T smart00870 55 SNMTPADWLKLAKRINEALADDGYDGVVVTHGT 87 (323)
T ss_pred ccCCHHHHHHHHHHHHHHhccCCCCEEEEecCC
Confidence 448899999999999876555566555 44454
No 252
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=22.14 E-value=1.7e+02 Score=26.55 Aligned_cols=38 Identities=8% Similarity=0.102 Sum_probs=29.2
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCc
Q 018834 50 NRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA 90 (350)
Q Consensus 50 nrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~ 90 (350)
..++....++.+.++++.+.+.++. ..++|++.|.|..
T Consensus 12 ~~~~~~~~~~~~~l~~l~~~l~~l~---g~~vvlVhGgg~~ 49 (252)
T cd04241 12 TDKDRPETIREENLERIARELAEAI---DEKLVLVHGGGSF 49 (252)
T ss_pred EcCCCCCccCHHHHHHHHHHHHhcc---CCCEEEEECCCcc
Confidence 3444456799999999999998876 5688999987643
No 253
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=22.08 E-value=2.4e+02 Score=23.49 Aligned_cols=37 Identities=22% Similarity=0.416 Sum_probs=27.5
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEE
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSM 84 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl 84 (350)
-++.||.|- +.||.+....+.+.++++..+ ...+|++
T Consensus 102 ~illlDEP~--~~LD~~~~~~l~~~l~~~~~~-~~tiii~ 138 (163)
T cd03216 102 RLLILDEPT--AALTPAEVERLFKVIRRLRAQ-GVAVIFI 138 (163)
T ss_pred CEEEEECCC--cCCCHHHHHHHHHHHHHHHHC-CCEEEEE
Confidence 456788885 899999999999999988643 4334443
No 254
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=21.83 E-value=1.7e+02 Score=26.67 Aligned_cols=49 Identities=10% Similarity=-0.016 Sum_probs=31.7
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCH-HHHHHHHHHHHhhhhhccCC
Q 018834 291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQ-GHCTKVESTKFGTSVRRHGG 344 (350)
Q Consensus 291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~-~e~l~~E~~~~~~~~~~~~~ 344 (350)
+.+..+++.+.+|.++..++++++.+.. ... .+++ |...+..++.++|.
T Consensus 189 a~~~a~~ia~~~~~a~~~~K~~l~~~~~---~~~~~~~~--~~~~~~~~~~~~d~ 238 (256)
T TIGR03210 189 VQKWCDEIVEKSPTAIAIAKRSFNMDTA---HQRGIAGM--GMYALKLYYDTAES 238 (256)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhc---ccchHHHH--HHHHHHHHccChhH
Confidence 3445677889999999999999988754 321 1223 34455555555553
No 255
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=21.67 E-value=2.3e+02 Score=25.22 Aligned_cols=39 Identities=13% Similarity=0.340 Sum_probs=29.1
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEc
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g 86 (350)
-++.||.|- +.||......+.+.+.++..+... .||+++
T Consensus 173 ~llllDEPt--~~LD~~~~~~l~~~l~~~~~~~~~-tiiivs 211 (236)
T cd03267 173 EILFLDEPT--IGLDVVAQENIRNFLKEYNRERGT-TVLLTS 211 (236)
T ss_pred CEEEEcCCC--CCCCHHHHHHHHHHHHHHHhcCCC-EEEEEe
Confidence 467789885 899999999999999988654343 444443
No 256
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=21.27 E-value=2.2e+02 Score=24.88 Aligned_cols=38 Identities=16% Similarity=0.352 Sum_probs=27.9
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEE
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSM 84 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl 84 (350)
-++.||.|- +.||......+.+.+.++..+....+|++
T Consensus 161 ~illlDEPt--~~LD~~~~~~l~~~l~~~~~~~~~tii~~ 198 (221)
T TIGR02211 161 SLVLADEPT--GNLDNNNAKIIFDLMLELNRELNTSFLVV 198 (221)
T ss_pred CEEEEeCCC--CcCCHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 356788885 89999999999999988865434333443
No 257
>TIGR02153 gatD_arch glutamyl-tRNA(Gln) amidotransferase, subunit D. This peptide is found only in the Archaea. It is part of a heterodimer, with GatE (TIGR00134), that acts as an amidotransferase on misacylated Glu-tRNA(Gln) to produce Gln-tRNA(Gln). The analogous amidotransferase found in bacteria is the GatABC system, although GatABC homologs in the Archaea appear to act instead on Asp-tRNA(Asn).
Probab=20.32 E-value=3.4e+02 Score=26.84 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=21.8
Q ss_pred CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC
Q 018834 56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88 (350)
Q Consensus 56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g 88 (350)
.-++++.+..|.+.+.+.-.+..-.+||..|+.
T Consensus 118 ~~mtp~~w~~La~~I~~~~~~~~dGvVVtHGTD 150 (404)
T TIGR02153 118 ENMKPEYWIKIAEAVAKALKEGADGVVVAHGTD 150 (404)
T ss_pred hhCCHHHHHHHHHHHHHHhhcCCCcEEEecCCh
Confidence 347778888888888775544233566666764
No 258
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=20.24 E-value=2.4e+02 Score=24.83 Aligned_cols=38 Identities=13% Similarity=0.348 Sum_probs=27.8
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEE
Q 018834 45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSM 84 (350)
Q Consensus 45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl 84 (350)
-++.||.|- +.||......+.+.+.++..+....+|++
T Consensus 166 ~llllDEPt--~~LD~~~~~~l~~~l~~~~~~~~~tii~~ 203 (228)
T PRK10584 166 DVLFADEPT--GNLDRQTGDKIADLLFSLNREHGTTLILV 203 (228)
T ss_pred CEEEEeCCC--CCCCHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 467788885 89999999999999988865434434443
Done!