BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018839
(350 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P7T7|POF1L_SCHPO POF1 homolog C694.03 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPAC694.03 PE=3 SV=1
Length = 249
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 22/142 (15%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVG- 275
+L SFNP H HL + I LS NADK P++ + +R+ EK+
Sbjct: 36 VLDSSFNPPHFAHLGM---CLSIPKGSQLLLLLSITNADK-PVAPAAFNERILMMEKLKT 91
Query: 276 ------MTVIISNQPYFYKKAEFFPGS------AFVIGADTAARLIDPKYYDGDPGKMV- 322
++V I F K +++G DT R++D KYY + V
Sbjct: 92 LIHNCTVSVAICKHALFVDKCRSISNKLGPREQVYLVGFDTLIRILDCKYYKEKAMQQVL 151
Query: 323 EVLSGCKRTGCTFIVAGRNIDG 344
+ C + C R +DG
Sbjct: 152 QPFFSCSQILC----FSREVDG 169
>sp|Q7NE64|NADD_GLOVI Probable nicotinate-nucleotide adenylyltransferase OS=Gloeobacter
violaceus (strain PCC 7421) GN=nadD PE=3 SV=1
Length = 206
Score = 38.5 bits (88), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVK 269
ER I G+FNP+H GHL + A CG + +A KP + I DRV+
Sbjct: 3 ERLGIFGGTFNPVHRGHLAMARAARDRCGLDQILWVPAAQPPHKPLAGGASIGDRVE 59
>sp|O28077|COAD_ARCFU Phosphopantetheine adenylyltransferase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=coaD PE=1 SV=1
Length = 148
Score = 38.1 bits (87), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGN 242
K+ L G+F PLH+GH KL++VA ++ G
Sbjct: 2 KVALGGTFEPLHEGHKKLIDVAIKLGGR 29
>sp|Q6MTX3|COAD_MYCMS Phosphopantetheine adenylyltransferase OS=Mycoplasma mycoides
subsp. mycoides SC (strain PG1) GN=coaD PE=3 SV=1
Length = 140
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 5/103 (4%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLS--VSQIKDRVKQFEKV 274
I GSFNP H+GHL +L+ A + Y + + P L V IK+ ++ F V
Sbjct: 5 IYPGSFNPFHNGHLNILKKAILLFDKVYVVVSKNINKSLDPDLQSRVKNIKNLIRDFNNV 64
Query: 275 GMTVIISNQPYFYKKAEFFPGSAFVIGADTAARL-IDPKYYDG 316
+II+ A+ S + G + + KYYDG
Sbjct: 65 --EIIINENKLTTTIAKELNASFIIRGLRSQTDFEYEIKYYDG 105
>sp|P45616|COAD_MYCCT Probable phosphopantetheine adenylyltransferase OS=Mycoplasma
capricolum subsp. capricolum (strain California kid /
ATCC 27343 / NCTC 10154) GN=coaD PE=3 SV=1
Length = 140
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLS--VSQIKDRVKQFEKV 274
I GSFNP H GHL +L+ A + Y + + P L V IK+ +K F V
Sbjct: 5 IYPGSFNPFHKGHLNILKKAILLFDKVYVVVSKNVNKSLDPDLQSRVENIKNLIKDFSNV 64
Query: 275 GMTVIISNQPYFYKKAEFFPGSAFVIGADTAARL-IDPKYYDG----DPG 319
+II+ A+ + G + A + KYYDG DP
Sbjct: 65 --EIIINENKLTTTIAKELNACFIIRGLRSQADFEYEIKYYDGFKSLDPN 112
>sp|B9MRP6|NADD_CALBD Probable nicotinate-nucleotide adenylyltransferase
OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 /
DSM 6725 / Z-1320) GN=nadD PE=3 SV=1
Length = 196
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 27/120 (22%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVGM 276
+ G+FNP+H GHL + + N ++ V PP V + D +FE V +
Sbjct: 5 LFGGTFNPIHIGHL----IMAQYVLNFSQVQKVIFVPNGHPPHKVEDVADAFDRFEMVKL 60
Query: 277 TVIISNQPYF------YKKA---------EFFPG----SAFVIGADTAARLIDPKYYDGD 317
+ I + PYF KK+ E+F F+IG+D + ++ K+Y +
Sbjct: 61 S--IEDNPYFDISDFEIKKSNPSWTIDTLEYFSSIYERVYFIIGSDNLSEIV--KWYKAE 116
>sp|P25576|POF1_YEAST Promoter of filamentation protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=POF1 PE=1 SV=1
Length = 258
Score = 36.6 bits (83), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 32/165 (19%)
Query: 188 LEQIINGEICFKVYPFLNETQVFNEERKIILSGSFNPLHDGHLKLLEVATRICG----NG 243
EQ + F+V L Q ++ +L SFNP H H +LL +
Sbjct: 5 FEQFRKSNLLFQV---LKGPQHLECQKLFVLDSSFNPPHLAHFQLLSQTIKNFKLKDTRS 61
Query: 244 YPCFELSAVNADKPP-------------LSVSQIKDRVKQ-FEKVGMTVI---ISNQPYF 286
+ L+ NADK P L +++++ Q VG+TV I
Sbjct: 62 HVLLLLAVNNADKLPKPASFPTRLEMMCLFADYLQEKLPQSVVSVGLTVFSKFIDKDKIL 121
Query: 287 YKKAEFFPGSA----FVIGADTAARLIDPKYYDGDPGKMVEVLSG 327
++ +F G + +++G DT AR+ D KYY P K+ +V+
Sbjct: 122 HE--QFVKGCSADIGYLVGFDTIARIFDEKYY--HPLKISDVMES 162
>sp|B8I385|COAD_CLOCE Phosphopantetheine adenylyltransferase OS=Clostridium
cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584
/ H10) GN=coaD PE=3 SV=1
Length = 160
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV 274
K I GSF+P+ +GHL ++E A++IC +N K PL I++RV +KV
Sbjct: 3 KFIYPGSFDPVTNGHLDIIERASKICDKLTVAV---LINQSKNPL--FSIEERVSLLKKV 57
>sp|A2BR50|COAD_PROMS Phosphopantetheine adenylyltransferase OS=Prochlorococcus marinus
(strain AS9601) GN=coaD PE=3 SV=1
Length = 157
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGN 242
KI+ G+F+PL +GHL L+E A +I GN
Sbjct: 2 KILYPGTFDPLTNGHLDLIERAEKIFGN 29
>sp|Q31AW9|COAD_PROM9 Phosphopantetheine adenylyltransferase OS=Prochlorococcus marinus
(strain MIT 9312) GN=coaD PE=3 SV=1
Length = 157
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGN 242
KI+ G+F+PL +GHL L+E A +I GN
Sbjct: 2 KILYPGTFDPLTNGHLDLIERAEKIFGN 29
>sp|A9HC14|NADD_GLUDA Probable nicotinate-nucleotide adenylyltransferase
OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 /
DSM 5601 / PAl5) GN=nadD PE=3 SV=1
Length = 215
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 217 ILSGSFNPLHDGHLKLLEVATR 238
+L GSFNP+HDGHL+L A R
Sbjct: 17 VLGGSFNPVHDGHLQLARRALR 38
>sp|Q8TK70|COAD_METAC Phosphopantetheine adenylyltransferase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=coaD PE=3 SV=1
Length = 156
Score = 35.8 bits (81), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGNG 243
K+ + G+F LHDGH +L+E A I G+G
Sbjct: 3 KVAVGGTFQYLHDGHARLIEKAFEIAGDG 31
>sp|A2BWL2|COAD_PROM5 Phosphopantetheine adenylyltransferase OS=Prochlorococcus marinus
(strain MIT 9515) GN=coaD PE=3 SV=1
Length = 159
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 10/46 (21%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGN----------GYPCFELS 250
KI+ G+F+PL +GHL L++ A ++ GN P FELS
Sbjct: 2 KILYPGTFDPLTNGHLDLIQRAEKLFGNVVVAVLENTSKKPTFELS 47
>sp|Q8PZN4|COAD_METMA Phosphopantetheine adenylyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=coaD PE=3 SV=1
Length = 154
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGNG 243
K+ + G+F LHDGH +L+E A I G+G
Sbjct: 3 KVAVGGTFQYLHDGHARLIEKAFEIAGSG 31
>sp|A8G4U2|COAD_PROM2 Phosphopantetheine adenylyltransferase OS=Prochlorococcus marinus
(strain MIT 9215) GN=coaD PE=3 SV=1
Length = 157
Score = 35.0 bits (79), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGN 242
KI+ G+F+PL +GH+ L+E A +I GN
Sbjct: 2 KILYPGTFDPLTNGHIDLIERAEKIFGN 29
>sp|Q6AK10|NADD_DESPS Probable nicotinate-nucleotide adenylyltransferase OS=Desulfotalea
psychrophila (strain LSv54 / DSM 12343) GN=nadD PE=3
SV=2
Length = 211
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRIC 240
+ G+FNPLH+GHL+L E A C
Sbjct: 6 LFGGTFNPLHNGHLQLAEFAAAQC 29
>sp|Q1IJZ0|HLDE_KORVE Bifunctional protein HldE OS=Koribacter versatilis (strain
Ellin345) GN=hldE PE=3 SV=1
Length = 486
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 211 NEERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIK 265
N+ER ++ +G F+ LH GH+ LLE A G+ + A+N+D+ SV ++K
Sbjct: 352 NDERIVVTNGCFDLLHVGHISLLEQA-----RGFGDRLVVAINSDR---SVRELK 398
>sp|Q8ZY96|COAD_PYRAE Phosphopantetheine adenylyltransferase OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=coaD PE=3 SV=1
Length = 155
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 214 RKIILSGSFNPLHDGHLKLLEVATRI 239
R ++L G+F+ LH GH+KLL AT I
Sbjct: 6 RNVVLGGTFDTLHSGHVKLLATATLI 31
>sp|A7HT64|NADD_PARL1 Probable nicotinate-nucleotide adenylyltransferase OS=Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=nadD PE=3 SV=1
Length = 201
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVG 275
+L GSFNP H+GHL + + R G + +S N K ++ R+ EK+
Sbjct: 15 LLGGSFNPAHEGHLHVTRMCLRALGLDRVWWLVSPQNPLKSDAGMASFDRRLASAEKMA 73
>sp|Q92LB1|NADD_RHIME Probable nicotinate-nucleotide adenylyltransferase OS=Rhizobium
meliloti (strain 1021) GN=nadD PE=3 SV=1
Length = 188
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV 274
+ GSFNP HDGH + E A R G + ++ N K ++ + +R+ EK+
Sbjct: 5 LFGGSFNPPHDGHALVAETALRRLGLDQLWWMVTPGNPLKDRNHLAPLGERIAMSEKI 62
>sp|Q97KN0|ADEC_CLOAB Adenine deaminase OS=Clostridium acetobutylicum (strain ATCC 824 /
DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=ade PE=3
SV=1
Length = 570
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 186 QELEQIINGEICFKVYPFLNETQVFNEERKII----LSGSFNPLHDGHLKLLEVATRICG 241
++L+++I+ + + +N V + E +++ L+GS+N + DGH A + G
Sbjct: 151 EDLKELIDSDRVLGLGEMMNYPGVLSREEEVLNKLKLAGSYNKIVDGH------APSVRG 204
Query: 242 NGYPCFELSAVNADKPPLSVSQIKDRVKQ 270
N + L+ + D S+ ++ ++++
Sbjct: 205 NELNAYNLAGIKTDHECSSIEEMNEKIRN 233
>sp|A5FP50|NADD_DEHSB Probable nicotinate-nucleotide adenylyltransferase
OS=Dehalococcoides sp. (strain BAV1) GN=nadD PE=3 SV=1
Length = 204
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 21/78 (26%)
Query: 217 ILSGSFNPLHDGHLKLL-EVATRI-------CGNGYPCFELSAVNADKPPLSVSQIKDRV 268
IL G+F+P+H GHL L EV R+ G P ++ ADK ++S +DR+
Sbjct: 8 ILGGTFDPIHTGHLILADEVKNRLGLDEVIFIPTGQPYYK-----ADK---TISPAEDRL 59
Query: 269 KQFEKVGMTVIISNQPYF 286
+ + IS++PYF
Sbjct: 60 NMVK-----LAISDKPYF 72
>sp|Q3ZW88|NADD_DEHSC Probable nicotinate-nucleotide adenylyltransferase
OS=Dehalococcoides sp. (strain CBDB1) GN=nadD PE=3 SV=1
Length = 204
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 21/78 (26%)
Query: 217 ILSGSFNPLHDGHLKLL-EVATRI-------CGNGYPCFELSAVNADKPPLSVSQIKDRV 268
IL G+F+P+H GHL L EV R+ G P ++ ADK ++S +DR+
Sbjct: 8 ILGGTFDPIHTGHLILADEVKNRLGLDEVIFIPTGQPYYK-----ADK---TISPAEDRL 59
Query: 269 KQFEKVGMTVIISNQPYF 286
+ + IS++PYF
Sbjct: 60 NMVK-----LAISDKPYF 72
>sp|Q3ZAJ1|NADD_DEHE1 Probable nicotinate-nucleotide adenylyltransferase
OS=Dehalococcoides ethenogenes (strain 195) GN=nadD PE=3
SV=1
Length = 204
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 21/78 (26%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICG--------NGYPCFELSAVNADKPPLSVSQIKDRV 268
IL G+F+P+H GHL L E + G G P ++ ADK ++S DR+
Sbjct: 8 ILGGTFDPIHTGHLILAEEVKKRLGLDEIIFIPTGQPYYK-----ADK---TISPAADRL 59
Query: 269 KQFEKVGMTVIISNQPYF 286
+ + IS +PYF
Sbjct: 60 NM-----VKLAISGKPYF 72
>sp|A3PCX3|COAD_PROM0 Phosphopantetheine adenylyltransferase OS=Prochlorococcus marinus
(strain MIT 9301) GN=coaD PE=3 SV=1
Length = 157
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICG 241
KI+ G+F+PL +GHL L+E A +I G
Sbjct: 2 KILYPGTFDPLTNGHLDLIERAEKIFG 28
>sp|A0Q101|COAD_CLONN Phosphopantetheine adenylyltransferase OS=Clostridium novyi (strain
NT) GN=coaD PE=3 SV=1
Length = 161
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 214 RKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK 273
R I GSF+P+ +GHL +++ A+++ VN DK L I++RVK EK
Sbjct: 2 RVAIYPGSFDPITEGHLDIIKRASKVFDEVIVSV---LVNPDKKGL--FSIEERVKLIEK 56
Query: 274 VGMTVIISNQPYFYKKAEFFPG 295
V T I N KAE F G
Sbjct: 57 V--TEDIDNV-----KAESFEG 71
>sp|Q7V1I7|COAD_PROMP Phosphopantetheine adenylyltransferase OS=Prochlorococcus marinus
subsp. pastoris (strain CCMP1986 / MED4) GN=coaD PE=3
SV=1
Length = 159
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGN 242
KI+ G+F+PL +GHL L++ A ++ GN
Sbjct: 2 KILYPGTFDPLTNGHLDLIQRAEKLFGN 29
>sp|O66614|COAD_AQUAE Phosphopantetheine adenylyltransferase OS=Aquifex aeolicus (strain
VF5) GN=coaD PE=3 SV=1
Length = 161
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 214 RKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKP-PLSVSQIKDRVKQFE 272
++++ G+F+P H GHL +++ + RI E+ A KP + ++RVK FE
Sbjct: 3 KRVVYPGTFDPPHYGHLDIVKRSARIFD------EVVVAVAKKPRKFLLFDAEERVKMFE 56
Query: 273 KV 274
K+
Sbjct: 57 KM 58
>sp|Q8UBS2|NADD_AGRT5 Probable nicotinate-nucleotide adenylyltransferase OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=nadD PE=3 SV=2
Length = 187
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV 274
+ GSFNP H GH + E+A R G + ++ N K ++ ++DR+ E++
Sbjct: 5 LFGGSFNPPHAGHALVAEIALRRLGLDQLWWMVTPGNPLKSRSELASLEDRIAACERL 62
>sp|A1AV35|NADD_PELPD Probable nicotinate-nucleotide adenylyltransferase OS=Pelobacter
propionicus (strain DSM 2379) GN=nadD PE=3 SV=2
Length = 216
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICG 241
++ G+FNP+H HL++ E A +CG
Sbjct: 5 LMGGTFNPIHMAHLRIAEEARELCG 29
>sp|P27726|G3P_PSEAE Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=gap PE=3 SV=3
Length = 334
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 16 SPTQAVVYIAGGASQALGMLMSIPGATNTVLEAVVPYSRMSMIQLLGQIPNQFCSQQTAV 75
S TQ+++ GA++A+G+++ T L VP +S++ L Q+ ++ T+V
Sbjct: 202 SATQSMIPTKTGAAEAVGLVLPELAGKLTGLAVRVPVINVSLVDLTVQV-----ARDTSV 256
Query: 76 NMALLAYNRALKLSRPGAPVLG 97
+ NR L+ + G+PVLG
Sbjct: 257 D----EVNRLLREASEGSPVLG 274
>sp|Q6APL9|Y976_DESPS Uncharacterized transporter DP0976 OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=DP0976 PE=3 SV=1
Length = 541
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 84 RALKLSRPGAPVLGVGFTGALASTHPKLGDHRFHLSTRTSDRLWVSTVTLSKGL 137
R LKLS ++G+GF LA+T + FH S TS ++ +T + GL
Sbjct: 87 RGLKLSLGTVAIIGIGFLTTLATT------YLFHFSAGTSAGIFTGALTSTPGL 134
>sp|B3PRZ6|NADD_RHIE6 Probable nicotinate-nucleotide adenylyltransferase OS=Rhizobium
etli (strain CIAT 652) GN=nadD PE=3 SV=1
Length = 192
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVG 275
+ GSFNP H GH + E+A + G + ++ N K ++ + +R+ + E+V
Sbjct: 5 LFGGSFNPPHQGHALVAEIAIKRLGLDQLWWMVTPGNPLKSRNQLAPLAERIAESERVA 63
>sp|Q8KA24|DAPA_BUCAP 4-hydroxy-tetrahydrodipicolinate synthase OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=dapA PE=3 SV=1
Length = 294
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 194 GEICFKVYPFLNETQVFNEERKIILSG----SFNPLHDGHLKLLEVATRICGNGYPCFEL 249
GEIC L + V N+ + I+ G S + H++++ + ++ P
Sbjct: 17 GEICHSSLKKLIDYHVLNKTKAIVSIGTTGESATLSQEEHIEVVMLTLKLANKRIPIIAG 76
Query: 250 SAVNADKPPLSVSQIKDRVKQFEKVGMTVIISNQPYFYK 288
+ NA +S++ K+FEK G+ ++ PY+ K
Sbjct: 77 TGANATTEAISLT------KRFEKSGIEACLTVTPYYNK 109
>sp|Q2K2X3|NADD_RHIEC Probable nicotinate-nucleotide adenylyltransferase OS=Rhizobium
etli (strain CFN 42 / ATCC 51251) GN=nadD PE=3 SV=1
Length = 192
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV 274
+ GSFNP H+GH + E+A + G + ++ N K ++ + +R+ + E+V
Sbjct: 5 LFGGSFNPPHEGHALVAEIAIKRLGLDQLWWMVTPGNPLKSRNLLAPLAERIAESERV 62
>sp|B5ZUE6|NADD_RHILW Probable nicotinate-nucleotide adenylyltransferase OS=Rhizobium
leguminosarum bv. trifolii (strain WSM2304) GN=nadD PE=3
SV=1
Length = 192
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 217 ILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVG 275
+ GSFNP H GH + E+A + G + ++ N K ++ + +R+ + E+V
Sbjct: 5 LFGGSFNPPHQGHALVAEIAIKRLGLDQLWWMVTPGNPLKSRNQLAPLAERIAESERVA 63
>sp|Q9H6D3|XKR8_HUMAN XK-related protein 8 OS=Homo sapiens GN=XKR8 PE=1 SV=1
Length = 395
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 69 CSQQTAVNMALLAYNRALKLSRPGAPVLGVG 99
C+ ++ ALL Y+RAL+ P P+LG+G
Sbjct: 168 CTSFLGISWALLDYHRALRTCLPSKPLLGLG 198
>sp|Q49LS0|XKR8_PANTR XK-related protein 8 OS=Pan troglodytes GN=XKR8 PE=2 SV=1
Length = 395
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 69 CSQQTAVNMALLAYNRALKLSRPGAPVLGVG 99
C+ ++ ALL Y+RAL+ P P+LG+G
Sbjct: 168 CTSFLGISWALLDYHRALRTCLPSRPLLGLG 198
>sp|Q46A30|COAD_METBF Phosphopantetheine adenylyltransferase OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=coaD PE=3 SV=1
Length = 161
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 215 KIILSGSFNPLHDGHLKLLEVATRICGNG 243
K+ + G+F HDGH KL+E A I +G
Sbjct: 3 KVAVGGTFQYFHDGHAKLIEKAFEIAEDG 31
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,365,818
Number of Sequences: 539616
Number of extensions: 5056124
Number of successful extensions: 14460
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 14430
Number of HSP's gapped (non-prelim): 46
length of query: 350
length of database: 191,569,459
effective HSP length: 118
effective length of query: 232
effective length of database: 127,894,771
effective search space: 29671586872
effective search space used: 29671586872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)