Query 018839
Match_columns 350
No_of_seqs 295 out of 2290
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 06:51:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018839.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018839hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a9s_A Competence/damage-induc 100.0 5.1E-30 1.7E-34 225.6 15.7 142 4-156 12-163 (171)
2 1yum_A 'probable nicotinate-nu 99.9 8.6E-22 2.9E-26 182.8 8.7 117 212-341 22-155 (242)
3 2h29_A Probable nicotinate-nuc 99.8 1.3E-21 4.3E-26 174.6 8.5 120 213-344 2-137 (189)
4 3h05_A Uncharacterized protein 99.8 3.8E-22 1.3E-26 176.9 5.1 112 213-341 2-134 (177)
5 1kam_A Deamido-NAD(+), nicotin 99.8 2.2E-20 7.7E-25 167.1 11.9 120 213-344 7-142 (194)
6 1k4m_A NAMN adenylyltransferas 99.8 6.5E-20 2.2E-24 166.5 12.1 118 214-344 3-138 (213)
7 2qtr_A Nicotinate (nicotinamid 99.8 4.6E-20 1.6E-24 163.9 9.9 119 213-343 2-136 (189)
8 1nup_A FKSG76; NAD biosynthesi 99.8 7.9E-20 2.7E-24 170.4 6.4 121 211-344 4-171 (252)
9 1kqn_A Nmnat, nicotinamide mon 99.8 1.3E-19 4.3E-24 171.5 5.2 123 211-343 6-191 (279)
10 3f3m_A Phosphopantetheine aden 99.5 3.7E-14 1.3E-18 124.4 8.2 91 213-308 3-97 (168)
11 3nbk_A Phosphopantetheine aden 99.5 1.1E-13 3.7E-18 122.2 9.8 93 211-308 19-115 (177)
12 3nd5_A Phosphopantetheine aden 99.4 1.7E-13 5.8E-18 120.5 8.9 91 213-308 2-97 (171)
13 1qjc_A Phosphopantetheine aden 99.4 3E-13 1E-17 116.2 9.6 89 213-306 1-93 (158)
14 1od6_A PPAT, phosphopantethein 99.4 4.6E-13 1.6E-17 115.5 9.6 86 216-304 3-92 (160)
15 4f3r_A Phosphopantetheine aden 99.4 4.2E-13 1.4E-17 117.0 8.3 91 213-308 5-98 (162)
16 1o6b_A Phosphopantetheine aden 99.4 1.4E-12 4.7E-17 113.7 10.5 91 213-308 2-96 (169)
17 1vlh_A Phosphopantetheine aden 99.3 4.6E-12 1.6E-16 111.4 8.6 94 211-317 10-107 (173)
18 1coz_A Protein (glycerol-3-pho 99.3 7.9E-12 2.7E-16 104.0 9.6 89 213-304 1-95 (129)
19 2qjt_B Nicotinamide-nucleotide 99.3 3.1E-12 1E-16 123.3 7.4 107 213-341 7-116 (352)
20 2qjo_A Bifunctional NMN adenyl 99.3 2.4E-12 8.3E-17 123.2 5.6 108 212-341 6-114 (341)
21 1ej2_A Nicotinamide mononucleo 99.2 1.9E-12 6.3E-17 114.4 3.2 57 214-273 4-61 (181)
22 3nv7_A Phosphopantetheine aden 99.2 1.7E-11 5.8E-16 106.3 6.4 86 213-304 2-92 (157)
23 3k9w_A Phosphopantetheine aden 99.2 4.7E-11 1.6E-15 106.4 8.8 93 211-308 20-116 (187)
24 1f9a_A Hypothetical protein MJ 99.2 1.7E-11 5.7E-16 107.0 5.4 56 215-273 2-58 (168)
25 2b7l_A Glycerol-3-phosphate cy 99.2 1.3E-10 4.5E-15 97.0 9.9 89 213-304 1-95 (132)
26 3do8_A Phosphopantetheine aden 99.1 2.1E-11 7.4E-16 104.6 3.0 58 215-273 2-60 (148)
27 1jhd_A Sulfate adenylyltransfe 99.1 4.5E-10 1.5E-14 110.6 11.0 117 214-341 194-333 (396)
28 1lw7_A Transcriptional regulat 99.0 2.1E-10 7.3E-15 111.4 4.1 59 213-273 2-67 (365)
29 3glv_A Lipopolysaccharide core 99.0 1E-09 3.4E-14 93.3 7.1 90 213-304 2-95 (143)
30 1v47_A ATP sulfurylase; produc 98.9 4.8E-09 1.6E-13 101.8 9.9 117 213-342 156-292 (349)
31 3hl4_A Choline-phosphate cytid 98.6 1.4E-07 4.9E-12 86.3 8.3 64 211-275 74-140 (236)
32 3elb_A Ethanolamine-phosphate 98.4 4E-07 1.4E-11 88.0 7.7 95 211-305 196-297 (341)
33 3elb_A Ethanolamine-phosphate 98.2 2.8E-06 9.6E-11 82.1 8.0 89 211-305 5-102 (341)
34 2x0k_A Riboflavin biosynthesis 97.9 1.4E-05 4.6E-10 77.2 7.2 121 213-341 15-155 (338)
35 1mrz_A Riboflavin kinase/FMN a 97.6 5.3E-05 1.8E-09 71.7 6.2 111 217-341 3-128 (293)
36 3gmi_A UPF0348 protein MJ0951; 97.6 0.00015 5.2E-09 70.3 8.1 66 212-280 51-118 (357)
37 3op1_A Macrolide-efflux protei 96.8 0.0049 1.7E-07 58.5 10.0 118 213-341 20-158 (308)
38 2ejc_A Pantoate--beta-alanine 95.8 0.014 4.8E-07 54.6 6.5 76 212-295 21-101 (280)
39 1r6x_A ATP:sulfate adenylyltra 94.6 0.065 2.2E-06 52.5 7.4 54 214-273 189-243 (395)
40 2gks_A Bifunctional SAT/APS ki 94.5 0.036 1.2E-06 56.5 5.4 104 214-343 165-269 (546)
41 1g8f_A Sulfate adenylyltransfe 93.8 0.13 4.4E-06 52.0 8.0 54 214-273 190-244 (511)
42 1m8p_A Sulfate adenylyltransfe 93.4 0.095 3.2E-06 53.7 6.2 102 214-342 192-294 (573)
43 1x6v_B Bifunctional 3'-phospho 89.9 0.63 2.2E-05 48.2 7.7 104 213-342 413-524 (630)
44 3ag6_A Pantothenate synthetase 89.9 0.57 1.9E-05 43.7 6.7 64 225-295 34-102 (283)
45 1v8f_A Pantoate-beta-alanine l 87.6 1 3.6E-05 41.8 6.7 64 225-295 28-96 (276)
46 3cr8_A Sulfate adenylyltranfer 87.2 1.5 5.2E-05 44.6 8.3 102 213-341 164-266 (552)
47 3cov_A Pantothenate synthetase 85.9 1.3 4.5E-05 41.6 6.5 63 225-295 44-113 (301)
48 3uk2_A Pantothenate synthetase 78.2 4.6 0.00016 37.5 6.9 65 214-281 23-92 (283)
49 3inn_A Pantothenate synthetase 68.8 11 0.00039 35.4 7.2 63 225-295 54-122 (314)
50 3mxt_A Pantothenate synthetase 58.2 19 0.00065 33.4 6.5 53 225-281 36-94 (285)
51 3n8h_A Pantothenate synthetase 57.4 17 0.00057 33.4 5.9 65 213-281 24-94 (264)
52 3mf7_A CIS-3-chloroacrylic aci 56.8 50 0.0017 27.3 8.4 88 66-163 9-97 (149)
53 3q12_A Pantoate--beta-alanine 50.8 28 0.00097 32.2 6.4 54 225-281 36-95 (287)
54 3mlc_A FG41 malonate semialdeh 33.2 51 0.0018 26.6 4.7 89 69-163 11-99 (136)
55 3kfl_A Methionyl-tRNA syntheta 25.7 27 0.00091 35.2 2.0 52 195-250 11-71 (564)
56 1otf_A 4-oxalocrotonate tautom 25.1 87 0.003 20.7 4.1 34 129-164 3-36 (62)
57 3ry0_A Putative tautomerase; o 23.9 94 0.0032 21.1 4.1 34 129-164 3-36 (65)
58 2opa_A Probable tautomerase YW 22.5 1.1E+02 0.0037 20.2 4.1 33 129-163 3-35 (61)
59 3n4h_A Putative tautomerase; C 21.7 2.1E+02 0.0072 22.9 6.5 88 66-163 9-97 (148)
60 3qhp_A Type 1 capsular polysac 21.1 2.9E+02 0.0099 21.3 8.3 95 213-327 2-97 (166)
61 1mww_A Hypothetical protein HI 21.1 1.1E+02 0.0037 23.9 4.4 84 70-163 11-94 (128)
62 1gyx_A YDCE, B1461, hypothetic 20.4 1.4E+02 0.0047 21.1 4.5 34 129-164 3-37 (76)
No 1
>2a9s_A Competence/damage-inducible protein CINA; APC5759, ATC1417, MCSG, protei structure initiative; 1.75A {Agrobacterium tumefaciens} SCOP: c.51.5.1
Probab=99.97 E-value=5.1e-30 Score=225.62 Aligned_cols=142 Identities=21% Similarity=0.208 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHcCCCcEeeeecccHHHHHHHhcCCCCccccccCceeecChHHHHHHhCCCCC-----CCCCHHHHHHHH
Q 018839 4 ACIRGVVEAIHASPTQAVVYIAGGASQALGMLMSIPGATNTVLEAVVPYSRMSMIQLLGQIPN-----QFCSQQTAVNMA 78 (350)
Q Consensus 4 ~~~~~~~~~i~~~~~~~~~a~tGgg~~~a~~l~~vpGaS~t~~~~~v~Ys~~~k~~llgv~~~-----g~VS~e~a~~MA 78 (350)
.+.+.+++.|.+++++|.+||++.|++++++|+++||||.+|.+|+|+|+|++|.++|||+++ |+||+|+|++||
T Consensus 12 ~l~~~v~~~L~~~~~tla~AEScTGGlla~~lt~vpGaS~~f~gG~VtYsn~~K~~lLgV~~~~L~~~GaVS~evA~~MA 91 (171)
T 2a9s_A 12 ELARRIITDFTPLGLMVSTAESCTGGLIAGALTEIAGSSAVVDRGFVTYTNDAKRDMLGVGTETLTTFGAVSRQTALQMA 91 (171)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESTTTTHHHHHHTTSTTGGGTEEEEEEECSHHHHHHHHCCCHHHHHHHCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEeHHhhHHHHHHHHHhCCCchhhcCCeEEecCHHHHHHHcCCCHHHHHhcCCCCHHHHHHHH
Confidence 356788999999999999998777777999999999999999999999999999999999876 999999999999
Q ss_pred HHHHHHHhhhcCCCCCeEEEEecCcccCC---CCCCCCcEEEEEEEeCCe-eEEEEEEe-CCchhhHHHHHHHHHHHHHH
Q 018839 79 LLAYNRALKLSRPGAPVLGVGFTGALAST---HPKLGDHRFHLSTRTSDR-LWVSTVTL-SKGLRTREQEDKVSSHLLLK 153 (350)
Q Consensus 79 ~~a~~~~~~l~~~~~~~~gia~Tg~ag~~---~~k~g~g~~~i~i~~~~~-~~~~~~~l-~~~~r~~~~~~~l~~~l~v~ 153 (350)
+++++++ .+|+|||+||++||+ .+|| +|+||+|+..+++ .++.+++| .++ |+.++++++ ...++
T Consensus 92 ~ga~~~~-------~ad~avavTGiAGP~g~~~~kp-vGtV~ia~a~~~~~~~~~~~~f~~g~-R~~ir~~a~--~~AL~ 160 (171)
T 2a9s_A 92 HGALYRS-------RANFAVAVTGIAGPGGGSAEKP-VGLVHLATKARNGNVLHHEMRYGDIG-RTEIRLATV--RTALE 160 (171)
T ss_dssp HHHHHTS-------SCSEEEEEEECCSSSCCCSSSC-TTEEEEEEEETTSCEEEEEEECCSCC-HHHHHHHHH--HHHHH
T ss_pred HhHHHHh-------CCCEEEEEeecCCCCCCCCCCC-CcEEEEEEEeCCCCEEEEEEECCCCC-HHHHHHHHH--HHHHH
Confidence 9999974 689999999999994 4577 8999999999877 78999999 776 999999887 44444
Q ss_pred HHH
Q 018839 154 AMA 156 (350)
Q Consensus 154 ~i~ 156 (350)
+|.
T Consensus 161 ~L~ 163 (171)
T 2a9s_A 161 MLI 163 (171)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 2
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.85 E-value=8.6e-22 Score=182.76 Aligned_cols=117 Identities=17% Similarity=0.275 Sum_probs=97.9
Q ss_pred CceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc--cC-CeEEEEchH----
Q 018839 212 EERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK--VG-MTVIISNQP---- 284 (350)
Q Consensus 212 ~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~--~g-~~v~is~~~---- 284 (350)
.++|+|++|||||+|+||++|++.|.++++.|+++++|+.+|++|+ .+..++++|++|++. .+ ..+.++++.
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p~K~-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~ 100 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPHRE-TPQVSAAQRLAMVERAVAGVERLTVDPRELQRD 100 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCGGGS-CTTCCHHHHHHHHHHHHTTCTTEEECCGGGGSS
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCCCCC-CCCCCHHHHHHHHHHHhcCCCeEEEeeeeecCC
Confidence 4679999999999999999999999999999999999999998884 357899999999985 23 456676644
Q ss_pred ---hHH----HHHHhC-CC--cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecC
Q 018839 285 ---YFY----KKAEFF-PG--SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRN 341 (350)
Q Consensus 285 ---~f~----~l~~~~-p~--~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~ 341 (350)
+.. .+.+.| |+ ++||+|.|++.+| ++||+++ +|++. |+|+|++|+
T Consensus 101 ~~sytvdtl~~l~~~~~p~~~~~fI~G~D~l~~l--~~W~~~~--~i~~~--------~~~vv~~R~ 155 (242)
T 1yum_A 101 KPSYTIDTLESVRAELAADDQLFMLIGWDAFCGL--PTWHRWE--ALLDH--------CHIVVLQRP 155 (242)
T ss_dssp SSCCHHHHHHHHHHHSCTTCEEEEEEEHHHHTTG--GGSTTGG--GSTTT--------CEEEEEECS
T ss_pred CCCCHHHHHHHHHHHhCCCCcEEEEEehhHhhhh--hhhcCHH--HHHhh--------CcEEEEECC
Confidence 222 244667 87 8999999999999 8999987 77763 999999998
No 3
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.85 E-value=1.3e-21 Score=174.58 Aligned_cols=120 Identities=21% Similarity=0.274 Sum_probs=98.8
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhcc---CCeEEEEchH-----
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV---GMTVIISNQP----- 284 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~---g~~v~is~~~----- 284 (350)
+++++++|||||+|+||+.|++.|.++++.|+++++|+.+|++|+..+..++++|++|++.. .+.+.|+++.
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~~~~ 81 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGG 81 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCTTSCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHHHCS
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCCCCcCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhcCCC
Confidence 47999999999999999999999999998899999999999999655678999999999841 1245555432
Q ss_pred ------hHHHHHHhCCC--cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecCCCC
Q 018839 285 ------YFYKKAEFFPG--SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRNIDG 344 (350)
Q Consensus 285 ------~f~~l~~~~p~--~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~~~~ 344 (350)
....+.+.||+ ++||+|.|++.++ ++||+++ +|++. |+++|++|.++.
T Consensus 82 ~syt~dtl~~l~~~~p~~~~~~i~G~D~~~~~--~~W~~~~--~i~~~--------~~~~v~~R~~~~ 137 (189)
T 2h29_A 82 QSYTYDTIKAFKEQHKDSELYFVIGTDQYNQL--EKWYQIE--YLKEM--------VTFVVVNRDKNS 137 (189)
T ss_dssp BCCHHHHHHHHHHHSTTEEEEEEEEHHHHTTG--GGSTTHH--HHHHH--------CEEEEECCSSSC
T ss_pred CCCHHHHHHHHHHHCCCCcEEEEEecchhhhh--ccccCHH--HHHhh--------CcEEEEECCCCc
Confidence 11234477888 8999999999999 9999986 87763 899999999754
No 4
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.85 E-value=3.8e-22 Score=176.87 Aligned_cols=112 Identities=23% Similarity=0.293 Sum_probs=86.0
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc-----cCCeEEEEchHh--
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK-----VGMTVIISNQPY-- 285 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~-----~g~~v~is~~~~-- 285 (350)
++|+||||||||||+||+.+++ +++.+ |+|++.|+..|+.|. +..++++|++|++. ....+.+++...
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~--d~v~~~p~~~~~~k~--~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~~l 76 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHF--DLVLLEPSIAHAWGK--NMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQAL 76 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTS--SEEEEEECC---------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHC--CEEEEEECCCCCCCC--CCCCHHHHHHHHHHHHhcCCCCcEEEEehhhhc
Confidence 5799999999999999999998 77765 899999998777653 56889999999974 113455544221
Q ss_pred -------H-----HHHHHhCCC--cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecC
Q 018839 286 -------F-----YKKAEFFPG--SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRN 341 (350)
Q Consensus 286 -------f-----~~l~~~~p~--~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~ 341 (350)
| ..+.+.||+ ++||||+|++..| ++||+++ +|++. |+|+|++|.
T Consensus 77 ~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l--~~W~~~~--~l~~~--------~~~vv~~r~ 134 (177)
T 3h05_A 77 YQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKF--AKFYKAE--EITER--------WTVMACPEK 134 (177)
T ss_dssp C----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTG--GGSTTHH--HHHHH--------SEEEECCCS
T ss_pred ccCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhc--ccchhHH--HHHHh--------CCEEEEcCC
Confidence 2 235577887 8999999999999 9999988 88885 899999984
No 5
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.83 E-value=2.2e-20 Score=167.14 Aligned_cols=120 Identities=23% Similarity=0.317 Sum_probs=94.4
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhcc--C-CeEEEEchH-----
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV--G-MTVIISNQP----- 284 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~--g-~~v~is~~~----- 284 (350)
+++++++|||||+|+||+.|++.|.+.++.|+++++|+..|++|+..+..++++|++|++.. + ..+.++++.
T Consensus 7 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~~ 86 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREG 86 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC---------CHHHHHHHHHHHHTTCTTEEECCGGGSTTC
T ss_pred cEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCCCcCCcCCCCHHHHHHHHHHHHcCCCCeEEeHHHhcCCC
Confidence 47999999999999999999999999998899999999999988645678999999999852 3 357776654
Q ss_pred -hH-----HHHHHhCCC--cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecCCCC
Q 018839 285 -YF-----YKKAEFFPG--SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRNIDG 344 (350)
Q Consensus 285 -~f-----~~l~~~~p~--~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~~~~ 344 (350)
.| ..+...||+ ++||+|.|++.++ ++||+++ +|++. |+++|++|.++.
T Consensus 87 ~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~~--~~W~~~e--~i~~~--------~~~~v~~R~g~~ 142 (194)
T 1kam_A 87 PSYTFDTVSLLKQRYPNDQLFFIIGADMIEYL--PKWYKLD--ELLNL--------IQFIGVKRPGFH 142 (194)
T ss_dssp CCSHHHHHHHHHHHSTTSEEEEEEETTTTTTC--CCCHHHH--HHHHH--------SEEEEEECSSCC
T ss_pred CCChHHHHHHHHHHCCCCcEEEEEecchhhhh--ccccCHH--HHHHh--------CcEEEEECCCcc
Confidence 12 235566887 7999999999999 9999986 88874 899999999764
No 6
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.81 E-value=6.5e-20 Score=166.51 Aligned_cols=118 Identities=21% Similarity=0.352 Sum_probs=98.3
Q ss_pred eE-EEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhcc--C-CeEEEEchH-----
Q 018839 214 RK-IILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV--G-MTVIISNQP----- 284 (350)
Q Consensus 214 ~i-~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~--g-~~v~is~~~----- 284 (350)
+| ++++|||||+|+||++|++.|.++++.|+++++|+.+|++|+. ...++++|++|++.. + ..+.++++.
T Consensus 3 ~i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~~k~~-~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~~ 81 (213)
T 1k4m_A 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQ-PEANSVQRKHMLELAIADKPLFTLDERELKRNA 81 (213)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTSCC-CSSCHHHHHHHHHHHHTTCTTEEECCHHHHCSS
T ss_pred eEEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCCCCC-CCCCHHHHHHHHHHHhccCCCEEEeHHHhcCCC
Confidence 47 9999999999999999999999999889999999999999854 478999999999853 3 467777654
Q ss_pred -hH-H----HHHHh-CCC--cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecCCCC
Q 018839 285 -YF-Y----KKAEF-FPG--SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRNIDG 344 (350)
Q Consensus 285 -~f-~----~l~~~-~p~--~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~~~~ 344 (350)
.| . .+.+. +|+ ++||+|.|++.+| ++||+++ +|++. |+|+|++|++..
T Consensus 82 ~s~t~~~l~~l~~~~~~~~~~~~i~G~D~~~~l--~~W~~~~--~i~~~--------~~~vv~~R~~~~ 138 (213)
T 1k4m_A 82 PSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTF--PTWYEYE--TILDN--------AHLIVCRRPGYP 138 (213)
T ss_dssp CCCHHHHHHHHHHHHCTTSCEEEEEEHHHHHHG--GGSTTHH--HHHHH--------CEEEEECCTTCC
T ss_pred CCcHHHHHHHHHHHhCCCCcEEEEEehhhhhhh--hccCCHH--HHHhh--------CcEEEEECCCCc
Confidence 22 1 23333 576 7999999999999 8999987 89884 999999999764
No 7
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.81 E-value=4.6e-20 Score=163.85 Aligned_cols=119 Identities=21% Similarity=0.368 Sum_probs=99.2
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhcc--C-CeEEEEchH-----
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV--G-MTVIISNQP----- 284 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~--g-~~v~is~~~----- 284 (350)
++|+|++|||||+|+||+.|++.|.++++.|++++.|+..|++|+.....++++|++|++.. + ..+.++++.
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~~k~~~~~~~~~~R~~ml~~~~~~~~~v~v~~~e~~~~~ 81 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEELSRKG 81 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCTTCTTSCCCCHHHHHHHHHHHHTTCTTEEECCTGGGSCS
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCCCccCCCCCCHHHHHHHHHHHhCCCCCEEEehHHhcCCC
Confidence 47999999999999999999999999998899999999999998655678999999999853 4 457776654
Q ss_pred -hHH-----HHHHhCCC--cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecCCC
Q 018839 285 -YFY-----KKAEFFPG--SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRNID 343 (350)
Q Consensus 285 -~f~-----~l~~~~p~--~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~~~ 343 (350)
.|. .+...+|+ ++||+|.|++..+ ++|++++ +|++. ++++|++|.+.
T Consensus 82 ~~~~~~~l~~l~~~~p~~~~~~v~G~D~~~~~--~~w~~~~--~l~~~--------~~~~v~~r~~~ 136 (189)
T 2qtr_A 82 PSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYL--PKWYNIE--ALLDL--------VTFVGVARPGY 136 (189)
T ss_dssp CCCHHHHHHHHHHHCTTCEEEEEEEHHHHHHG--GGSTTHH--HHTTT--------CEEEEECCTTC
T ss_pred CCCHHHHHHHHHHHCCCCCEEEEEehhhhhhh--hccCCHH--HHHHh--------CCEEEEECCCC
Confidence 232 35566887 8999999999999 8999876 77663 89999999875
No 8
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.78 E-value=7.9e-20 Score=170.42 Aligned_cols=121 Identities=19% Similarity=0.222 Sum_probs=94.6
Q ss_pred CCceEEEEeecCchhhHHHHHHHHHHHhhcCCC---e---eEEEEccCCCCCCCCCCCcHHHHHHHHhc-----------
Q 018839 211 NEERKIILSGSFNPLHDGHLKLLEVATRICGNG---Y---PCFELSAVNADKPPLSVSQIKDRVKQFEK----------- 273 (350)
Q Consensus 211 ~~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d---~---v~~~~s~~n~~K~~~~~~~~~~R~~ml~~----------- 273 (350)
..++++|++|||||+|+||+.|++.|.+.++.+ . ++|.|+..|++|. ...++++|++|++.
T Consensus 4 ~~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~--~~~~~~~R~~m~~~ai~~~~~~~v~ 81 (252)
T 1nup_A 4 RIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKK--DLAASHHRVAMARLALQTSDWIRVD 81 (252)
T ss_dssp CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSS--CCCCHHHHHHHHHHHGGGCSSEEEC
T ss_pred CCceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCC--CCCCHHHHHHHHHHHhcCCCceEee
Confidence 346799999999999999999999999998765 3 4788888888875 46899999999973
Q ss_pred ------cCCeEEEEchHhHHHHHHhC-------------------C----CcEEEEchhhhhhcCCC-CccCCCcccHHH
Q 018839 274 ------VGMTVIISNQPYFYKKAEFF-------------------P----GSAFVIGADTAARLIDP-KYYDGDPGKMVE 323 (350)
Q Consensus 274 ------~g~~v~is~~~~f~~l~~~~-------------------p----~~~fviG~D~l~~l~d~-kwy~~~~~~ile 323 (350)
.++++++++..++. +.| | .++||||+|++.+|.+| +||+.+.++|++
T Consensus 82 ~~E~~~~~~syTidtL~~l~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~fiiGaD~l~~l~~p~~W~~~~~~~i~~ 158 (252)
T 1nup_A 82 PWESEQAQWMETVKVLRHHH---SKLLRSPPQMEGPDHGKALFSTPAAVPELKLLCGADVLKTFQTPNLWKDAHIQEIVE 158 (252)
T ss_dssp CHHHHSSSCCCHHHHHHHHH---HHHC--------------------CCCEEEEEEEHHHHHHTTSTTTSCHHHHHHHHH
T ss_pred hHHhcCCCCCCHHHHHHHHH---HHHhhccccccccccccccccCCCCCceEEEEEecchHhHCCCcCccCcchHHHHHh
Confidence 23455555555554 333 3 38999999999999655 899832237877
Q ss_pred hhccCCCCCeeEEEEecCCCC
Q 018839 324 VLSGCKRTGCTFIVAGRNIDG 344 (350)
Q Consensus 324 ~~~~l~~~~~~~~V~~R~~~~ 344 (350)
. |.|+|++|+++.
T Consensus 159 ~--------~~lvv~~R~g~~ 171 (252)
T 1nup_A 159 K--------FGLVCVGRVSHD 171 (252)
T ss_dssp H--------TCEEEECCTTCC
T ss_pred h--------CcEEEEECCCCC
Confidence 4 899999999875
No 9
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.77 E-value=1.3e-19 Score=171.51 Aligned_cols=123 Identities=20% Similarity=0.199 Sum_probs=94.1
Q ss_pred CCceEEEEeecCchhhHHHHHHHHHHHhhcCCCe---e---EEEEccCCCCCCCCCCCcHHHHHHHHhc-----------
Q 018839 211 NEERKIILSGSFNPLHDGHLKLLEVATRICGNGY---P---CFELSAVNADKPPLSVSQIKDRVKQFEK----------- 273 (350)
Q Consensus 211 ~~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~---v---~~~~s~~n~~K~~~~~~~~~~R~~ml~~----------- 273 (350)
..++++|++|||||+|+||+.|++.|++.++.+. + +|.|+..|++|. ...++++|++|++.
T Consensus 6 ~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K~--~l~s~~~R~~ml~~ai~~~~~~~v~ 83 (279)
T 1kqn_A 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKK--GLIPAYHRVIMAELATKNSKWVEVD 83 (279)
T ss_dssp CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCCT--TCCCHHHHHHHHHHHTTTCSSEEEC
T ss_pred CCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCcccc--CCCCHHHHHHHHHHHhcCCCcEEEe
Confidence 4568999999999999999999999999987652 5 678888888874 46899999999984
Q ss_pred ------cCCeEEEEchHhHHHHHH--------------------hC---------------CC----cEEEEchhhhhhc
Q 018839 274 ------VGMTVIISNQPYFYKKAE--------------------FF---------------PG----SAFVIGADTAARL 308 (350)
Q Consensus 274 ------~g~~v~is~~~~f~~l~~--------------------~~---------------p~----~~fviG~D~l~~l 308 (350)
.++++++++..++.+.-. .| |+ ++||||+|++.+|
T Consensus 84 ~~E~~~~~~syTidtL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~GaD~l~~~ 163 (279)
T 1kqn_A 84 TWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESF 163 (279)
T ss_dssp CTGGGCSSCCCHHHHHHHHHHHHTC--------------------------------------CCCEEEEEEEHHHHHHT
T ss_pred ccccccCCCCcHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccCCCCCccEEEEEehhhHhhC
Confidence 234566666666653220 01 43 8999999999999
Q ss_pred CCC-CccCCCcccHHHhhccCCCCCeeEEEEecCCC
Q 018839 309 IDP-KYYDGDPGKMVEVLSGCKRTGCTFIVAGRNID 343 (350)
Q Consensus 309 ~d~-kwy~~~~~~ile~~~~l~~~~~~~~V~~R~~~ 343 (350)
.+| +||+.+.++|++. |+|+|++|++.
T Consensus 164 ~~p~~W~~~~~e~il~~--------~~lvv~~R~g~ 191 (279)
T 1kqn_A 164 AVPNLWKSEDITQIVAN--------YGLICVTRAGN 191 (279)
T ss_dssp TSTTTSCHHHHHHHHHH--------TCEEEEESCHH
T ss_pred cCccccCcchHHHHHhh--------CcEEEEeCCCC
Confidence 655 8998322378774 89999999864
No 10
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.49 E-value=3.7e-14 Score=124.40 Aligned_cols=91 Identities=18% Similarity=0.256 Sum_probs=67.9
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc---cCCeEEEEchHhHH-H
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK---VGMTVIISNQPYFY-K 288 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~---~g~~v~is~~~~f~-~ 288 (350)
++|++++|||||+|+||++++++|.+++ |++++.|+. |+.|. +..+.++|++|++. .-+.+.++++..|. +
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~--d~viv~v~~-~p~K~--~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~tvd 77 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRF--DEIHVCVLK-NSKKE--GTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVD 77 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGS--SEEEEEECC--------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCHHH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhC--CEEEEEEcC-CCCCC--CCCCHHHHHHhHHHHhcCCCCEEEEEcCCCHHH
Confidence 5799999999999999999999999997 789999984 77773 57889999999985 23567777766433 3
Q ss_pred HHHhCCCcEEEEchhhhhhc
Q 018839 289 KAEFFPGSAFVIGADTAARL 308 (350)
Q Consensus 289 l~~~~p~~~fviG~D~l~~l 308 (350)
..+.+...+||+|.|++.++
T Consensus 78 ~~~~l~~~~~I~G~d~~~d~ 97 (168)
T 3f3m_A 78 YCEQVGAKTIIRGLRAVSDF 97 (168)
T ss_dssp HHHHHTCCEEEEEECTTCCH
T ss_pred HHHHcCCCEEEEcCCchhhh
Confidence 33333335699999987664
No 11
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.48 E-value=1.1e-13 Score=122.23 Aligned_cols=93 Identities=17% Similarity=0.209 Sum_probs=72.9
Q ss_pred CCceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc---cCCeEEEEchHhHH
Q 018839 211 NEERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK---VGMTVIISNQPYFY 287 (350)
Q Consensus 211 ~~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~---~g~~v~is~~~~f~ 287 (350)
.+++++|++|||||+|+||+++++.|.+.+ |++++.|+ .|++|. +..++++|++|++. .-+.+.|+++..|.
T Consensus 19 ~~mki~i~~GsFDPiH~GHl~ii~~A~~~~--D~Viv~v~-~np~K~--~~~s~eeR~~mv~~a~~~~~~v~V~~~e~l~ 93 (177)
T 3nbk_A 19 SHMTGAVCPGSFDPVTLGHVDIFERAAAQF--DEVVVAIL-VNPAKT--GMFDLDERIAMVKESTTHLPNLRVQVGHGLV 93 (177)
T ss_dssp -CCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEC-CCTTSC--CSSCHHHHHHHHHHHCTTCTTEEEEECCSCH
T ss_pred CCCEEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEEc-CCCCCC--CCCCHHHHHHHHHHHhCCCCCEEEEecCchH
Confidence 678899999999999999999999999997 78999998 567774 57899999999985 23568888876543
Q ss_pred -HHHHhCCCcEEEEchhhhhhc
Q 018839 288 -KKAEFFPGSAFVIGADTAARL 308 (350)
Q Consensus 288 -~l~~~~p~~~fviG~D~l~~l 308 (350)
+..+.+.--+||.|.+++.++
T Consensus 94 vd~~~~~~a~~ivrGlr~~~Df 115 (177)
T 3nbk_A 94 VDFVRSCGMTAIVKGLRTGTDF 115 (177)
T ss_dssp HHHHHHTTCCEEEEEECTTCCH
T ss_pred HHHHHHcCCCEEEECCCchhHH
Confidence 344444445788998775555
No 12
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.45 E-value=1.7e-13 Score=120.54 Aligned_cols=91 Identities=16% Similarity=0.307 Sum_probs=65.3
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc---cCCeEEE-EchHhHH-
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK---VGMTVII-SNQPYFY- 287 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~---~g~~v~i-s~~~~f~- 287 (350)
++|++++|||||+|+||+++++.|.+.+ |++++.++ .|+.|. +..++++|++|++. ..+.+.+ +.+..+.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~--D~viv~v~-~~~~K~--~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~tv 76 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLF--DEVIIGVF-INTSKQ--TLFTPEEKKYLIEEATKEMPNVRVIMQETQLTV 76 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEE-C--------CCCHHHHHHHHHHHHTTCTTEEEEEECSSCHH
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHC--CCeEEEEe-cCCCCC--CCCCHHHHHHHHHHHHccCCCEEEeeCCCCcHH
Confidence 5799999999999999999999999997 78988885 577774 57899999999984 2356777 6654322
Q ss_pred HHHHhCCCcEEEEchhhhhhc
Q 018839 288 KKAEFFPGSAFVIGADTAARL 308 (350)
Q Consensus 288 ~l~~~~p~~~fviG~D~l~~l 308 (350)
+..+.+..-+||+|.|++.++
T Consensus 77 d~~~~l~~~~~i~G~~~~~d~ 97 (171)
T 3nd5_A 77 ESAKSLGANFLIRGIRNVKDY 97 (171)
T ss_dssp HHHHHHTCCEEEEEECSHHHH
T ss_pred HHHHHCCCCEEEECCCchhhh
Confidence 322222223799999887775
No 13
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.44 E-value=3e-13 Score=116.21 Aligned_cols=89 Identities=18% Similarity=0.337 Sum_probs=67.1
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc--cC-CeEEEEchHhHH-H
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK--VG-MTVIISNQPYFY-K 288 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~--~g-~~v~is~~~~f~-~ 288 (350)
|++++++|||||+|+||+.|++.|.+++ |++++.|+. |++|. +..++++|++|++. .+ ..+.++++..|. +
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~--d~v~v~~~~-~p~k~--~~~~~~~R~~ml~~a~~~~~~v~v~~~~~~~~~ 75 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMF--DHVILAIAA-SPSKK--PMFTLEERVALAQQATAHLGNVEVVGFSDLMAN 75 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEES-CCSSC--CSSCHHHHHHHHHHHTTTCTTEEEEEECSCHHH
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhC--CEEEEEECC-CCCCC--CCCCHHHHHHHHHHHHhcCCCeEEcccchHHHH
Confidence 4789999999999999999999999987 688999986 57763 57899999999986 44 356666654333 3
Q ss_pred HHHhCCCcEEEEchhhhh
Q 018839 289 KAEFFPGSAFVIGADTAA 306 (350)
Q Consensus 289 l~~~~p~~~fviG~D~l~ 306 (350)
..+.+..-+|++|.|.+.
T Consensus 76 ~l~~l~~~~~v~G~d~~~ 93 (158)
T 1qjc_A 76 FARNQHATVLIRGLRAVA 93 (158)
T ss_dssp HHHHTTCCEEEEECCTTC
T ss_pred HHHHcCCCEEEEeccchh
Confidence 333333348999988643
No 14
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.42 E-value=4.6e-13 Score=115.45 Aligned_cols=86 Identities=20% Similarity=0.287 Sum_probs=63.8
Q ss_pred EEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc--cC-CeEEEEchHhHH-HHHH
Q 018839 216 IILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK--VG-MTVIISNQPYFY-KKAE 291 (350)
Q Consensus 216 ~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~--~g-~~v~is~~~~f~-~l~~ 291 (350)
++++|||||+|+||+.|++.|.+++ |++++.|+ .|++|+..+..++++|++|++. .+ ..+.++++..|. +..+
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~~~-~~p~k~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~~~l~ 79 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLF--EKVTVAVL-ENPSKRGQYLFSAEERLAIIREATAHLANVEAATFSGLLVDFVR 79 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEE-CC-----CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHHHHHH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHC--CEEEEEEc-CCCCCCCCCCCCHHHHHHHHHHHhcCCCCEEEEecCchHHHHHH
Confidence 8999999999999999999999997 67899998 6777754357899999999986 24 457777765443 3334
Q ss_pred hCCCcEEEEchhh
Q 018839 292 FFPGSAFVIGADT 304 (350)
Q Consensus 292 ~~p~~~fviG~D~ 304 (350)
.+..-+|++|.|.
T Consensus 80 ~l~~~~~v~G~d~ 92 (160)
T 1od6_A 80 RVGAQAIVKGLRA 92 (160)
T ss_dssp HTTCSEEEEEECT
T ss_pred HcCCCEEEEeCCc
Confidence 4444579999874
No 15
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.40 E-value=4.2e-13 Score=117.00 Aligned_cols=91 Identities=18% Similarity=0.260 Sum_probs=67.3
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhcc--CCeEEEEchHhH-HHH
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV--GMTVIISNQPYF-YKK 289 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~--g~~v~is~~~~f-~~l 289 (350)
+++++++|||||+|+||++++++|.+.+ |++++.++ .|+.|. +..+.++|++|++.. ...+.++.+..+ .+.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~--d~viv~v~-~~~~K~--~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~~~ 79 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLF--NKIIVACA-PTSRKD--PHLKLEERVNLIADVLTDERVEVLPLTGLLVDF 79 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGC--SEEEEEEC-CC--------CCHHHHHHHHHHHCCCTTEEEEECCSCHHHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHC--CcEEEEEe-cCCccC--CCCCHHHHHHHHHHhhCCCCEEEEeccchHHHH
Confidence 5799999999999999999999999997 78999998 577773 568899999999852 256777765532 233
Q ss_pred HHhCCCcEEEEchhhhhhc
Q 018839 290 AEFFPGSAFVIGADTAARL 308 (350)
Q Consensus 290 ~~~~p~~~fviG~D~l~~l 308 (350)
.+.+.--+||.|.|++.++
T Consensus 80 ~~~~~~~~~v~G~r~~~Df 98 (162)
T 4f3r_A 80 AKTHQANFILRGLRAVSDF 98 (162)
T ss_dssp HHHTTCCEEEEEECSHHHH
T ss_pred HHHcCCCEEEECCCchhhh
Confidence 3333235799998888877
No 16
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.39 E-value=1.4e-12 Score=113.74 Aligned_cols=91 Identities=15% Similarity=0.249 Sum_probs=70.2
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc--cC-CeEEEEchHhHH-H
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK--VG-MTVIISNQPYFY-K 288 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~--~g-~~v~is~~~~f~-~ 288 (350)
++|++++|||||+|+||+.+++.|.+.+ |++++.++ .||.| .+..+.++|++|++. .+ ..+.++.+..|. +
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~--d~v~v~~~-~~p~k--~~l~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~~ 76 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIF--EQVYVCVL-NNSSK--KPLFSVEERCELLREVTKDIPNITVETSQGLLID 76 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEC-CCCSS--CCSSCHHHHHHHHHHHHTTCTTEEEEECSSCHHH
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhC--CEEEEEEC-CCCcc--CCCCCHHHHHHHHHHHHhcCCCEEEcccchHHHH
Confidence 4799999999999999999999999997 67888888 56776 356899999999986 33 456776665443 3
Q ss_pred HHHhCCCcEEEEchhhhhhc
Q 018839 289 KAEFFPGSAFVIGADTAARL 308 (350)
Q Consensus 289 l~~~~p~~~fviG~D~l~~l 308 (350)
..+.+..-+|++|.|.+.++
T Consensus 77 ~l~~l~~~~~i~G~d~~~~~ 96 (169)
T 1o6b_A 77 YARRKNAKAILRGLRAVSDF 96 (169)
T ss_dssp HHHHTTCSEEEEEECSGGGH
T ss_pred HHHHcCCCEEEEcCccccch
Confidence 33434345899999987654
No 17
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.30 E-value=4.6e-12 Score=111.38 Aligned_cols=94 Identities=19% Similarity=0.217 Sum_probs=66.0
Q ss_pred CCceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc-c--CCeEEEEchHh-H
Q 018839 211 NEERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK-V--GMTVIISNQPY-F 286 (350)
Q Consensus 211 ~~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~-~--g~~v~is~~~~-f 286 (350)
...-|++++|||||+|+||+.+++.|++++ |++++.|+.++..| +..++++|++|++. . -..+.++++.. .
T Consensus 10 ~~~~i~i~~GsFdP~H~GHl~l~~~A~~~~--D~viv~v~~~~~kk---~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 84 (173)
T 1vlh_A 10 HHHMKAVYPGSFDPITLGHVDIIKRALSIF--DELVVLVTENPRKK---CMFTLEERKKLIEEVLSDLDGVKVDVHHGLL 84 (173)
T ss_dssp ---CEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEECCTTCC---CSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred ccceEEEEEEEECcCcHHHHHHHHHHHHHC--CEEEEEEeCCCCCC---CCCCHHHHHHHHHHHhcCCCCEEEecCcchH
Confidence 344589999999999999999999999997 78999999854333 56889999999984 2 23577766553 2
Q ss_pred HHHHHhCCCcEEEEchhhhhhcCCCCccCCC
Q 018839 287 YKKAEFFPGSAFVIGADTAARLIDPKYYDGD 317 (350)
Q Consensus 287 ~~l~~~~p~~~fviG~D~l~~l~d~kwy~~~ 317 (350)
.+..+.+..-+|+.| + ++|++++
T Consensus 85 vd~l~~l~~~~~i~g------l--~~w~d~~ 107 (173)
T 1vlh_A 85 VDYLKKHGIKVLVRG------L--RAVTDYE 107 (173)
T ss_dssp HHHHHHHTCCEEEEE------E--CTTSCHH
T ss_pred HHHHHHhCCCeEEeC------C--Ccccchh
Confidence 232232222335544 4 6788876
No 18
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.30 E-value=7.9e-12 Score=104.00 Aligned_cols=89 Identities=28% Similarity=0.352 Sum_probs=65.7
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCC--CCCCCCCCCcHHHHHHHHhccC-C-eEEE-EchHhHH
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVN--ADKPPLSVSQIKDRVKQFEKVG-M-TVII-SNQPYFY 287 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n--~~K~~~~~~~~~~R~~ml~~~g-~-~v~i-s~~~~f~ 287 (350)
|++++++|+|||+|+||+.++++|.+.+ +++++.++..+ +.|++.+..+.++|++|++..+ . .+.+ .++..|.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLG--DYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKK 78 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTS--SEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEECCSTTHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHHHHH
Confidence 4689999999999999999999999986 67888888752 2233345789999999999876 3 3333 3344454
Q ss_pred H-HHHhCCCcEEEEchhh
Q 018839 288 K-KAEFFPGSAFVIGADT 304 (350)
Q Consensus 288 ~-l~~~~p~~~fviG~D~ 304 (350)
+ +.++.++ ++++|.|.
T Consensus 79 ~~l~~~~~~-~iv~G~D~ 95 (129)
T 1coz_A 79 QDIIDHNID-VFVMGDDW 95 (129)
T ss_dssp HHHHHTTCS-EEEEEGGG
T ss_pred HHHHHhCCc-EEEECCCC
Confidence 4 3344455 78999995
No 19
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.29 E-value=3.1e-12 Score=123.27 Aligned_cols=107 Identities=14% Similarity=0.101 Sum_probs=76.2
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhccCCeEEEEchHhHHHHHH-
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVGMTVIISNQPYFYKKAE- 291 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~~- 291 (350)
++++||+|||||+|+||+++++.|++++ |++++.++.+++.+.+....++.+|++|++.. ++.
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~~~~~v~~~~~~~~~~~~~~~~~R~~m~~~~--------------~~~~ 70 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNS--KKVIINIGSCFNTPNIKNPFSFEQRKQMIESD--------------LQVA 70 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSE--EEEEEEEEEESCCCCSSSCSCHHHHHHHHHHH--------------HHHT
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhC--CcEEEEECCCCCCcccCCCCCHHHHHHHHHHH--------------hccc
Confidence 5799999999999999999999999996 57888888877766555678999999999751 111
Q ss_pred hCC--CcEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecC
Q 018839 292 FFP--GSAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRN 341 (350)
Q Consensus 292 ~~p--~~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~ 341 (350)
.+| ++.+++|.|.+... +.|.+.....+ ...+.....+.+.+|.
T Consensus 71 ~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~ig~~ 116 (352)
T 2qjt_B 71 GIDLDTVVIEPLADYFYQE--QKWQDELRKNV----YKHAKNNNSIAIVGHI 116 (352)
T ss_dssp TCCGGGEEEEEEECCTTCH--HHHHHHHHHHH----TTTSCSSCCEEECCBS
T ss_pred cCccceEEEEEcCCCcCCh--HHHHHHHHHHH----HHhcccCCeEEEEcCC
Confidence 123 37788888877666 67776521122 2233344566666654
No 20
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.27 E-value=2.4e-12 Score=123.21 Aligned_cols=108 Identities=18% Similarity=0.122 Sum_probs=79.1
Q ss_pred CceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEE-EEccCCCCCCCCCCCcHHHHHHHHhccCCeEEEEchHhHHHHH
Q 018839 212 EERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCF-ELSAVNADKPPLSVSQIKDRVKQFEKVGMTVIISNQPYFYKKA 290 (350)
Q Consensus 212 ~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~-~~s~~n~~K~~~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~ 290 (350)
.+++++++|||||+|+||+.|++.|++.+ |++++ +++..++.+.. ...++.+|++|++...... +
T Consensus 6 ~~~~~i~~G~FdP~H~GH~~li~~a~~~~--d~v~v~v~~~~~p~~~~-~~~~~~~R~~m~~~~~~~~-----~------ 71 (341)
T 2qjo_A 6 KYQYGIYIGRFQPFHLGHLRTLNLALEKA--EQVIIILGSHRVAADTR-NPWRSPERMAMIEACLSPQ-----I------ 71 (341)
T ss_dssp SEEEEEEEECCTTCCHHHHHHHHHHHHHE--EEEEEEEEEETCCCCSS-SCSCHHHHHHHHHTTSCHH-----H------
T ss_pred eeeEEEEEEEeCCCCHHHHHHHHHHHHhC--CeEEEEECCcccCCCCC-CCCCHHHHHHHHHHHhhhc-----c------
Confidence 35899999999999999999999999998 66775 66655666543 3578999999998643211 0
Q ss_pred HhCCCcEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecC
Q 018839 291 EFFPGSAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRN 341 (350)
Q Consensus 291 ~~~p~~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~ 341 (350)
..+++|++|.|.+..+ ++|++.. .++++.+. +..+++++++++
T Consensus 72 --~~~~~~i~~~d~~~~~--~~w~~~~-~~l~~~l~---r~~~~~~~~g~~ 114 (341)
T 2qjo_A 72 --LKRVHFLTVRDWLYSD--NLWLAAV-QQQVLKIT---GGSNSVVVLGHR 114 (341)
T ss_dssp --HTTEEEEEEECCTTCH--HHHHHHH-HHHHHHHH---TTCSCEEEEECC
T ss_pred --CCeEEEEECCCCcCCh--HHHHHHH-HHHhHHhc---CCCceEEEEcCC
Confidence 1357899999998888 8899863 14666433 233567777654
No 21
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.25 E-value=1.9e-12 Score=114.43 Aligned_cols=57 Identities=21% Similarity=0.254 Sum_probs=47.9
Q ss_pred eEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEE-ccCCCCCCCCCCCcHHHHHHHHhc
Q 018839 214 RKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFEL-SAVNADKPPLSVSQIKDRVKQFEK 273 (350)
Q Consensus 214 ~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~-s~~n~~K~~~~~~~~~~R~~ml~~ 273 (350)
++++++|||||+|+||+.+++.|.+. .|++++.+ +..+++|+. ...+.++|++|++.
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~--~d~v~v~v~~~~~p~~~~-~~~~~~~R~~~~~~ 61 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEE--VDELIICIGSAQLSHSIR-DPFTAGERVMMLTK 61 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTT--CSEEEEEECSTTCCSSSS-SCSCHHHHHHHHHH
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHh--CCeeEEEECCCCCCcCCC-CCCCHHHHHHHHHH
Confidence 58999999999999999999999998 46787765 777777643 46799999999975
No 22
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.19 E-value=1.7e-11 Score=106.28 Aligned_cols=86 Identities=15% Similarity=0.233 Sum_probs=62.5
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc---cCCeEEEEchHh-HHH
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK---VGMTVIISNQPY-FYK 288 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~---~g~~v~is~~~~-f~~ 288 (350)
+++++++|||||+|+||++++++|.+++ |++++.++ .|++| .+..+.++|++|++. .-..+.++.+.. ..+
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~--D~viv~v~-~~~~K--~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~l~~~ 76 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELF--EKLIVAVA-HSSAK--NPMFSLDERLKMIQLATKSFKNVECVAFEGLLAY 76 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEE-CCGGG--CCSSCHHHHHHHHHHHHTTSTTEEEEEECSCHHH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhC--CceEEEEc-cCCCC--CCCCCHHHHHHHHHHHhcCCCcEEEEecCchHHH
Confidence 4799999999999999999999999997 67877765 56666 357889999999985 234666665543 223
Q ss_pred HHH-hCCCcEEEEchhh
Q 018839 289 KAE-FFPGSAFVIGADT 304 (350)
Q Consensus 289 l~~-~~p~~~fviG~D~ 304 (350)
..+ ..|+ .+|.|.++
T Consensus 77 ~~~~~~~~-~ivrG~r~ 92 (157)
T 3nv7_A 77 LAKEYHCK-VLVRGLRV 92 (157)
T ss_dssp HHHHTTCC-CBCCCCSC
T ss_pred HHHHcCCC-EEEECCcc
Confidence 333 3343 57888544
No 23
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.18 E-value=4.7e-11 Score=106.37 Aligned_cols=93 Identities=17% Similarity=0.222 Sum_probs=69.8
Q ss_pred CCceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhcc--C-CeEEEEchHhHH
Q 018839 211 NEERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKV--G-MTVIISNQPYFY 287 (350)
Q Consensus 211 ~~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~--g-~~v~is~~~~f~ 287 (350)
..+++++++|||||+|+||++++++|.+.+ |++++.++. |+.|. +..+.++|++|++.. + ..+.+..+..|.
T Consensus 20 ~~mki~v~~GsFDpiH~GHl~li~~A~~~~--d~viv~v~~-~p~K~--~l~s~eeR~~ml~~~~~~v~~v~v~~f~~~~ 94 (187)
T 3k9w_A 20 GSMVVAVYPGTFDPLTRGHEDLVRRASSIF--DTLVVGVAD-SRAKK--PFFSLEERLKIANEVLGHYPNVKVMGFTGLL 94 (187)
T ss_dssp CCCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEEC-CGGGC--CSSCHHHHHHHHHHHHTTCTTEEEEEESSCH
T ss_pred CCcEEEEEEEeCCcCcHHHHHHHHHHHHHC--CcEEEEEec-CCccC--CCCCHHHHHHHHHHHhccCCcEEEEechhhH
Confidence 346899999999999999999999999996 678888874 55553 578899999999873 3 456666655433
Q ss_pred -HHHHhCCCcEEEEchhhhhhc
Q 018839 288 -KKAEFFPGSAFVIGADTAARL 308 (350)
Q Consensus 288 -~l~~~~p~~~fviG~D~l~~l 308 (350)
+..+.+.-.+||+|.|++.++
T Consensus 95 ~d~l~~l~~~~iv~G~r~~~Df 116 (187)
T 3k9w_A 95 KDFVRANDARVIVRGLRAVSDF 116 (187)
T ss_dssp HHHHHHTTCSEEEEECCTTSCH
T ss_pred HHHHHHcCCCEEEECCCccccc
Confidence 233333335799998876665
No 24
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.17 E-value=1.7e-11 Score=107.01 Aligned_cols=56 Identities=18% Similarity=0.319 Sum_probs=47.4
Q ss_pred EEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEE-ccCCCCCCCCCCCcHHHHHHHHhc
Q 018839 215 KIILSGSFNPLHDGHLKLLEVATRICGNGYPCFEL-SAVNADKPPLSVSQIKDRVKQFEK 273 (350)
Q Consensus 215 i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~-s~~n~~K~~~~~~~~~~R~~ml~~ 273 (350)
+++++|||||+|+||+.+++.|.+.+ |++++.+ +..+++|+. ...+.++|++|++.
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~v~~~~~p~~~~-~~~~~~~R~~m~~~ 58 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEV--DEIIIGIGSAQKSHTLE-NPFTAGERILMITQ 58 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTCCSSSS-CCSCHHHHHHHHHH
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhC--CeEEEEEcCCCCCCCCC-CCCCHHHHHHHHHH
Confidence 78999999999999999999999984 6788865 877777643 35689999999984
No 25
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.16 E-value=1.3e-10 Score=97.02 Aligned_cols=89 Identities=26% Similarity=0.304 Sum_probs=65.6
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCC--CCCCCCCCcHHHHHHHHhccC-C-eEEE-EchHhHH
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNA--DKPPLSVSQIKDRVKQFEKVG-M-TVII-SNQPYFY 287 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~--~K~~~~~~~~~~R~~ml~~~g-~-~v~i-s~~~~f~ 287 (350)
|++++++|+|||+|+||+.++++|.+.+ +++++.++..+. .+.+.+..+.++|++|++..+ . .+.+ .++..|.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMG--DYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKE 78 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTBTTCCEEEEECCGGGHH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhC--CcEEEEEECCHHHhccCCCCCCCHHHHHHHHHhcCCCCEEEECCChHHHH
Confidence 4689999999999999999999999986 467788876531 122235789999999999766 3 4445 3344555
Q ss_pred H-HHHhCCCcEEEEchhh
Q 018839 288 K-KAEFFPGSAFVIGADT 304 (350)
Q Consensus 288 ~-l~~~~p~~~fviG~D~ 304 (350)
+ +.+..|+ .+++|.|.
T Consensus 79 ~~~~~~~~~-~iv~G~D~ 95 (132)
T 2b7l_A 79 DDVEKFDVD-VFVMGHDW 95 (132)
T ss_dssp HHHHHTTCC-EEEECGGG
T ss_pred HHHHHcCCC-EEEECCCC
Confidence 4 4445565 58999997
No 26
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.11 E-value=2.1e-11 Score=104.61 Aligned_cols=58 Identities=29% Similarity=0.495 Sum_probs=49.8
Q ss_pred EEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCC-CCCCCCCcHHHHHHHHhc
Q 018839 215 KIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNAD-KPPLSVSQIKDRVKQFEK 273 (350)
Q Consensus 215 i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~-K~~~~~~~~~~R~~ml~~ 273 (350)
.++|+|||||+|+||+.+++.|.++ ..|++++.|+.+++. |...+..++++|++|++.
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~-~~d~viv~v~~~~~~~k~~~~~~~~~~R~~ml~~ 60 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKL-GGRDITIGVTSDRMARARIRSVLPFAIRAENVKR 60 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHH-HTTCEEEEEECHHHHHHHSCCCSCHHHHHHHHHH
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHh-CCCEEEEEECCCccccccCCCCCCHHHHHHHHHH
Confidence 4799999999999999999999998 468999999998876 333457889999999874
No 27
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=99.07 E-value=4.5e-10 Score=110.64 Aligned_cols=117 Identities=15% Similarity=0.128 Sum_probs=85.5
Q ss_pred eEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc------cCCeEEEEc-----
Q 018839 214 RKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK------VGMTVIISN----- 282 (350)
Q Consensus 214 ~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~------~g~~v~is~----- 282 (350)
+|.. +|||||+|+||..|++.|++.++.|.+++.|+..+ .|+ +..+...|++|++. ...++.++-
T Consensus 194 ~Vva-fqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~-~K~--~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p~~m 269 (396)
T 1jhd_A 194 KVVA-FQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK-LKK--GDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGFDM 269 (396)
T ss_dssp SEEE-EEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC-CCT--TCCCHHHHHHHHHHHHHHHSCTTCEEEEEEECCC
T ss_pred eEEE-eccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC-CCC--CCCCHHHHHHHHHHHHHhcCCCcceEEEechHHh
Confidence 4544 99999999999999999999998899999999864 663 45789999999874 233333322
Q ss_pred ------hHhHHH-HHHhCCCcEEEEchhhh--hhcCCCCccCCCcccHHHhhccCCC---CCeeEEEEecC
Q 018839 283 ------QPYFYK-KAEFFPGSAFVIGADTA--ARLIDPKYYDGDPGKMVEVLSGCKR---TGCTFIVAGRN 341 (350)
Q Consensus 283 ------~~~f~~-l~~~~p~~~fviG~D~l--~~l~d~kwy~~~~~~ile~~~~l~~---~~~~~~V~~R~ 341 (350)
...++. .++.|....||||.|.+ ..+ .+||+.+ +|++.+ .. .+++++++.|.
T Consensus 270 ~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~--y~~~~aq--~il~~~---~~~~~l~i~iv~~~~~ 333 (396)
T 1jhd_A 270 LYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDY--YGAFDAQ--TIFDDE---VPEGAMEIEIFRADHT 333 (396)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTC--SCTTHHH--HHHHHT---SCTTSCSCEEEECCCE
T ss_pred hcCCchHHHHHHHHHHcCCCcEEEECCCCCCcccc--CCcchHH--HHHHhc---ccccccceeEEecccc
Confidence 112333 23445447999999997 667 7788877 888743 22 45899999885
No 28
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=98.97 E-value=2.1e-10 Score=111.42 Aligned_cols=59 Identities=15% Similarity=0.302 Sum_probs=50.2
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCC-----CCC--CCCCcHHHHHHHHhc
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNAD-----KPP--LSVSQIKDRVKQFEK 273 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~-----K~~--~~~~~~~~R~~ml~~ 273 (350)
+++++++|||||+|+||+++++.|.+++ |+|++.|+.++++ |.. +...++++|++|++.
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~ 67 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKV--DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQ 67 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTC--SEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHH
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEECCCCccccccccccccCCCCCHHHHHHHHHH
Confidence 5799999999999999999999999986 8999999988763 211 234889999999984
No 29
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=98.95 E-value=1e-09 Score=93.32 Aligned_cols=90 Identities=14% Similarity=0.251 Sum_probs=66.7
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCC-CC-CCCCCCCcHHHHHHHHhccC-C-eEEEEchHhHHH
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVN-AD-KPPLSVSQIKDRVKQFEKVG-M-TVIISNQPYFYK 288 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n-~~-K~~~~~~~~~~R~~ml~~~g-~-~v~is~~~~f~~ 288 (350)
|+++++.|+|||+|.||+.++++|.+.. +++++.++..+ +. |......+.++|++|++..+ . .+.+.+...|.+
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~--~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~~~f~~ 79 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLG--DELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHEGDMMK 79 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTS--SEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCTTCHHH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhC--CCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCchhHHH
Confidence 6789999999999999999999999975 45666565432 22 33456789999999999877 3 455556666776
Q ss_pred HHHhCCCcEEEEchhh
Q 018839 289 KAEFFPGSAFVIGADT 304 (350)
Q Consensus 289 l~~~~p~~~fviG~D~ 304 (350)
+.+.+.--.+++|.|.
T Consensus 80 ~~~~l~~~~iv~G~d~ 95 (143)
T 3glv_A 80 TVIEVKPDIITLGYDQ 95 (143)
T ss_dssp HHHHHCCSEEEECTTC
T ss_pred HHHhcCCCEEEECCCC
Confidence 5444433678999996
No 30
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=98.88 E-value=4.8e-09 Score=101.79 Aligned_cols=117 Identities=15% Similarity=0.195 Sum_probs=83.1
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc------cCCeEEEEc----
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK------VGMTVIISN---- 282 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~------~g~~v~is~---- 282 (350)
++|.. .|||||+|+||..|++.|++. .|.+++.|+..+ .|+ +..+.+.|++|++. ...++.+.-
T Consensus 156 ~~Vva-fqTrNPiHrgH~~l~~~ale~--~d~vll~P~~g~-~K~--~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~ 229 (349)
T 1v47_A 156 RKVVA-FQTRNAPHRAHEYLIRLGLEL--ADGVLVHPILGA-KKP--DDFPTEVIVEAYQALIRDFLPQERVAFFGLATP 229 (349)
T ss_dssp CSEEE-EEESSCCCHHHHHHHHHHHHH--SSEEEEEEBCSC-CCT--TSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSC
T ss_pred CeEEE-eecCCCCchHHHHHHHHHHHh--CCcEEEEECCCC-CCC--CCCCHHHHHHHHHHHHhhcCCCcceEEEechHH
Confidence 34555 699999999999999999997 678999999755 563 45789999999974 222333322
Q ss_pred -------hHhHHHH-HHhCCCcEEEEchhhh--hhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecCC
Q 018839 283 -------QPYFYKK-AEFFPGSAFVIGADTA--ARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRNI 342 (350)
Q Consensus 283 -------~~~f~~l-~~~~p~~~fviG~D~l--~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~~ 342 (350)
...+..+ ++.|....||+|.|.+ .++ ..||+.+ +|++.+ ...++++++++|..
T Consensus 230 m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~--y~~~~aq--~i~~~~---~~l~i~~v~~~~~~ 292 (349)
T 1v47_A 230 MRYAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDF--YDPYAAH--RIFDRL---PPLGIEIVKVGAVF 292 (349)
T ss_dssp CCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTC--SCTTHHH--HGGGGS---CCCSSEEEECCCEE
T ss_pred hhcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccc--cCcccHH--HHHHhh---hhcCceEEeccccE
Confidence 1123333 3445448999999997 777 6788776 777743 24567898888863
No 31
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=98.55 E-value=1.4e-07 Score=86.29 Aligned_cols=64 Identities=19% Similarity=0.296 Sum_probs=52.1
Q ss_pred CCceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCC---CCCCCCCCCcHHHHHHHHhccC
Q 018839 211 NEERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVN---ADKPPLSVSQIKDRVKQFEKVG 275 (350)
Q Consensus 211 ~~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n---~~K~~~~~~~~~~R~~ml~~~g 275 (350)
.++.++++.|+|||+|.||++++++|.+.++.|.+++.++.+. ..|+ .+..+.++|++|++..+
T Consensus 74 ~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg-~pi~s~eER~e~v~~~k 140 (236)
T 3hl4_A 74 ERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKG-FTVMNENERYDAVQHCR 140 (236)
T ss_dssp TSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTC-CCSSCHHHHHHHHHTBT
T ss_pred CCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCC-CCCCCHHHHHHHHHHhC
Confidence 4567899999999999999999999999987677877777543 1343 35789999999999865
No 32
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.41 E-value=4e-07 Score=87.95 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=66.4
Q ss_pred CCceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccC---CCCCCC-CCCCcHHHHHHHHhccCC--eEEEEch-
Q 018839 211 NEERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAV---NADKPP-LSVSQIKDRVKQFEKVGM--TVIISNQ- 283 (350)
Q Consensus 211 ~~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~---n~~K~~-~~~~~~~~R~~ml~~~g~--~v~is~~- 283 (350)
..+++++++|||||+|+||++++++|.+.++.-++++-+..+ |..|++ .+..+.++|+++++...+ .|.+...
T Consensus 196 ~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~v~~~~ 275 (341)
T 3elb_A 196 PGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPY 275 (341)
T ss_dssp TTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTBTTCCEEEEEECS
T ss_pred CCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHcCCCCCEEECCCC
Confidence 456799999999999999999999999986421566666544 234543 578899999999987543 5666432
Q ss_pred HhHHHHHHhCCCcEEEEchhhh
Q 018839 284 PYFYKKAEFFPGSAFVIGADTA 305 (350)
Q Consensus 284 ~~f~~l~~~~p~~~fviG~D~l 305 (350)
....+..+.+.--.++-|.|..
T Consensus 276 ~l~~~~~~~~~~~~iv~G~d~~ 297 (341)
T 3elb_A 276 AVTAELLSHFKVDLVCHGKTEI 297 (341)
T ss_dssp SCCHHHHHHTTCSEEEECSSCC
T ss_pred cchHHHHHhcCCcEEEECCCCc
Confidence 2223333444335688888753
No 33
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.19 E-value=2.8e-06 Score=82.06 Aligned_cols=89 Identities=17% Similarity=0.222 Sum_probs=63.2
Q ss_pred CCceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCC---CCCCCCCCCcHHHHHHHHhccC-Ce-EEEEc---
Q 018839 211 NEERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVN---ADKPPLSVSQIKDRVKQFEKVG-MT-VIISN--- 282 (350)
Q Consensus 211 ~~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n---~~K~~~~~~~~~~R~~ml~~~g-~~-v~is~--- 282 (350)
.++++++..|+|||+|.||++++++|.+.+ |++++.++.+. ..|+ .+..+.++|+++++..+ .. |.+.+
T Consensus 5 ~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~--d~LiVgV~~d~~v~~~K~-~pi~s~eER~~~l~~l~~VD~Vv~f~~~~ 81 (341)
T 3elb_A 5 RRAVRVWCDGCYDMVHYGHSNQLRQARAMG--DYLIVGVHTDEEIAKHKG-PPVFTQEERYKMVQAIKWVDEVVPAAPYV 81 (341)
T ss_dssp CCCCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEECCHHHHHHHSS-CCSSCHHHHHHHHHHBTTCCEEEETCCSS
T ss_pred CCceEEEEEeeCCCCCHHHHHHHHHHHHhC--CcCEEEeecCHHHhccCC-CCCCCHHHHHHHHHHcCCCCEEEecCCCC
Confidence 456789999999999999999999999986 55666666543 1243 36789999999999873 43 33322
Q ss_pred -hHhHHHHHHhCCCcEEEEchhhh
Q 018839 283 -QPYFYKKAEFFPGSAFVIGADTA 305 (350)
Q Consensus 283 -~~~f~~l~~~~p~~~fviG~D~l 305 (350)
...|. +.+.--++|.|.|.-
T Consensus 82 ~~~efi---~~~~~d~vV~G~D~~ 102 (341)
T 3elb_A 82 TTLETL---DKYNCDFCVHGNDIT 102 (341)
T ss_dssp CCHHHH---HHTTCSEEEECSCCC
T ss_pred CHHHHH---HHhCCCEEEECCCCC
Confidence 22333 344335689998863
No 34
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=97.93 E-value=1.4e-05 Score=77.22 Aligned_cols=121 Identities=16% Similarity=0.244 Sum_probs=76.1
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCC-CeeEEEEccCC-------CCCCCCCCCcHHHHHHHHhccCCeEEE-E--
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGN-GYPCFELSAVN-------ADKPPLSVSQIKDRVKQFEKVGMTVII-S-- 281 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~-d~v~~~~s~~n-------~~K~~~~~~~~~~R~~ml~~~g~~v~i-s-- 281 (350)
..+++..|+||++|.||..++++|.+.... +...+.+|..+ +++....+.+..+|+++++..|..+.+ .
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~gVD~v~v~~F 94 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFGIDGVLVIDF 94 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTTCSEEEEECT
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcCCCEEEEccc
Confidence 457888999999999999999999987532 12233333321 233223478999999999998865443 2
Q ss_pred -------chHhHHHH--HHhCCCcEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecC
Q 018839 282 -------NQPYFYKK--AEFFPGSAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRN 341 (350)
Q Consensus 282 -------~~~~f~~l--~~~~p~~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~ 341 (350)
+...|.+. .+.+.--.+++|.|.---- .+|++. +.|+.++ .+ |+++.+.++.
T Consensus 95 ~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~--~r~g~~---~~L~~~~--~~-g~~V~~v~~~ 155 (338)
T 2x0k_A 95 TRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGE--NAAGTA---DSLRQIC--QS-RLTVDVIDLL 155 (338)
T ss_dssp TTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESG--GGCEEH---HHHHHHT--TT-TSEEEEECCC
T ss_pred cHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCC--CCCCCH---HHHHHHh--cC-CeEEEEECcE
Confidence 23445531 1112116789999874333 445554 3444333 24 7899998874
No 35
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=97.65 E-value=5.3e-05 Score=71.67 Aligned_cols=111 Identities=17% Similarity=0.177 Sum_probs=68.6
Q ss_pred EEeecCchhhHHHHHHHHHHHhhcCC---CeeEE--EEcc--CCCCCCCCCCCcHHHHHHHHhccCCeEEEEch------
Q 018839 217 ILSGSFNPLHDGHLKLLEVATRICGN---GYPCF--ELSA--VNADKPPLSVSQIKDRVKQFEKVGMTVIISNQ------ 283 (350)
Q Consensus 217 i~~GSFnP~H~gHl~m~~~a~~~~~~---d~v~~--~~s~--~n~~K~~~~~~~~~~R~~ml~~~g~~v~is~~------ 283 (350)
+--|+||++|.||..++++|.+.... ..+++ .+.+ ..++ ......+..+|+++++..| .+.+-.+
T Consensus 3 vtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~-~~~~l~~~~eR~~ll~~lg-~~~v~~F~~~a~l 80 (293)
T 1mrz_A 3 VSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPD-FPGLLMTVESRVEMLSRYA-RTVVLDFFRIKDL 80 (293)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTT-CCCBSSCHHHHHHHHTTTS-CEEEECHHHHTTC
T ss_pred EEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCC-CCCCCCCHHHHHHHHHhCC-CEEEEEhHHhhcC
Confidence 55799999999999999999976532 21222 2222 1122 1245789999999999988 5555443
Q ss_pred --HhHHHHHHhCCCcEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecC
Q 018839 284 --PYFYKKAEFFPGSAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRN 341 (350)
Q Consensus 284 --~~f~~l~~~~p~~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~ 341 (350)
..|.+... +.--.+++|.|.---- .+|.+. +.|+. .|+++.+.|..
T Consensus 81 s~~~Fi~~il-l~~~~iVvG~Df~fG~--~~~g~~---~~L~~------~G~~V~~v~~~ 128 (293)
T 1mrz_A 81 TPEGFVERYL-SGVSAVVVGRDFRFGK--NASGNA---SFLRK------KGVEVYEIEDV 128 (293)
T ss_dssp CHHHHHHHHC-TTCCEEEEETTCCBSG--GGCBCH---HHHHH------TTCEEEEECCC
T ss_pred CHHHHHHHHh-cCCCEEEECCCCCCCC--CCCCCH---HHHHh------CCCEEEEECCE
Confidence 34442111 2225799999984332 345443 23332 46788888864
No 36
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=97.56 E-value=0.00015 Score=70.30 Aligned_cols=66 Identities=18% Similarity=0.211 Sum_probs=51.8
Q ss_pred CceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCC--CCCCCCCCCcHHHHHHHHhccCCeEEE
Q 018839 212 EERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVN--ADKPPLSVSQIKDRVKQFEKVGMTVII 280 (350)
Q Consensus 212 ~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n--~~K~~~~~~~~~~R~~ml~~~g~~v~i 280 (350)
.+++++.-|.|||+|+||..+++++.+ .+.++..+|... ..++.....+..+|.+++...|..+.+
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~---~~~~~~Vms~~~~~vqrg~~~l~~~~~R~~~~~~~GvD~vi 118 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE---HGIFISVLPGPLERSGRGIPYFLNRYIRAEMAIRAGADIVV 118 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT---SSEEEEEECCTTSBCTTSSBCSSCHHHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH---cCCeEEEEcCchHHhcCCCCcCCCHHHHHHHHHHCCCCEEE
Confidence 346788899999999999999999999 456667777543 444445678999999999988876554
No 37
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=96.84 E-value=0.0049 Score=58.55 Aligned_cols=118 Identities=14% Similarity=0.253 Sum_probs=73.7
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCC-eeEEEEccCC-------C-C-CCCCCCCcHHHHHHHHhccCCeEEEE-
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNG-YPCFELSAVN-------A-D-KPPLSVSQIKDRVKQFEKVGMTVIIS- 281 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d-~v~~~~s~~n-------~-~-K~~~~~~~~~~R~~ml~~~g~~v~is- 281 (350)
...++--|.||-+|.||..+++++.+..... .....+|..+ + + +....+.+..+|+++++..|....+.
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lGVD~v~~~ 99 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREGVEELYLL 99 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHTCCEEEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcCCCEEEEe
Confidence 4578899999999999999999999876432 1233333332 1 1 12234788999999999988765542
Q ss_pred ---------chHhHHH-HHHhCCCcEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecC
Q 018839 282 ---------NQPYFYK-KAEFFPGSAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRN 341 (350)
Q Consensus 282 ---------~~~~f~~-l~~~~p~~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~ 341 (350)
+...|.+ +.+.+.--.+++|.|. ++ .+ -.++ .+.|+.++. . ++.+.++.
T Consensus 100 ~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~Df--rF--G~-r~G~-~~~L~~~~~---~--~V~~v~~~ 158 (308)
T 3op1_A 100 DFSSQFASLTAQEFFATYIKAMNAKIIVAGFDY--TF--GS-DKKT-AEDLKNYFD---G--EVIIVPPV 158 (308)
T ss_dssp CCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTC--CB--TT-TTBC-STTHHHHCS---S--EEEEECCC
T ss_pred cCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCC--CC--CC-cCCC-HHHHHHhCC---C--CEEEeCCE
Confidence 2455554 2222222578999994 44 44 3222 244554332 2 67787764
No 38
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=95.78 E-value=0.014 Score=54.62 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=51.6
Q ss_pred CceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCC--CCC---CCCCCcHHHHHHHHhccCCeEEEEchHhH
Q 018839 212 EERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNA--DKP---PLSVSQIKDRVKQFEKVGMTVIISNQPYF 286 (350)
Q Consensus 212 ~k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~--~K~---~~~~~~~~~R~~ml~~~g~~v~is~~~~f 286 (350)
.++|+.. |+|+-+|.||+.++++|.+.. |.+++-+..++. .++ ..-+.+.++|+++|+..|..+.+. +.+
T Consensus 21 g~~V~~v-gtfdgLH~GH~sLI~~A~~~a--d~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~GVD~vf~--p~~ 95 (280)
T 2ejc_A 21 KKTIGFV-PTMGYLHEGHLSLVRRARAEN--DVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKENVDCIFH--PSV 95 (280)
T ss_dssp TCCEEEE-EECSCCCHHHHHHHHHHHHHS--SEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTTTCSEEEC--CCH
T ss_pred CCEEEEE-cCCccccHHHHHHHHHHHHhC--CEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHCCCCEEEe--CCH
Confidence 3456666 899999999999999999985 444444433321 111 112567899999999999776665 233
Q ss_pred HHHHHhCCC
Q 018839 287 YKKAEFFPG 295 (350)
Q Consensus 287 ~~l~~~~p~ 295 (350)
. +.||.
T Consensus 96 ~---~m~p~ 101 (280)
T 2ejc_A 96 E---EMYPP 101 (280)
T ss_dssp H---HHSCT
T ss_pred H---HCCCc
Confidence 3 66776
No 39
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=94.61 E-value=0.065 Score=52.46 Aligned_cols=54 Identities=20% Similarity=0.247 Sum_probs=35.4
Q ss_pred eEEEEeecCchhhHHH-HHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc
Q 018839 214 RKIILSGSFNPLHDGH-LKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK 273 (350)
Q Consensus 214 ~i~i~~GSFnP~H~gH-l~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~ 273 (350)
+|.- -.++||+|.|| ..|.+.+++. .+.+++-|... ..|+ +-.+..-|++..+.
T Consensus 189 ~Vva-fqtrNP~HraH~e~~~r~a~e~--~~~lllhPlvG-~tK~--~Dip~~vR~~~~~~ 243 (395)
T 1r6x_A 189 RVVA-FQTRNPMHRAHRELTVRAAREA--NAKVLIHPVVG-LTKP--GDIDHHTRVRVYQE 243 (395)
T ss_dssp CEEE-ECCSSCCCHHHHHHHHHHHHHT--TCEEEECCBCS-BCCT--TCCCHHHHHHHHHH
T ss_pred cEEE-eccCCCcchhhHHHHHHHHHHc--CCcEEEEECCC-CCCC--CCCCHHHHHHHHHH
Confidence 4444 55899999999 5556666653 34555555544 4443 34678999998763
No 40
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=94.46 E-value=0.036 Score=56.53 Aligned_cols=104 Identities=15% Similarity=0.198 Sum_probs=60.5
Q ss_pred eEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhccCCeEEEEchHhHHHHHHhC
Q 018839 214 RKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVGMTVIISNQPYFYKKAEFF 293 (350)
Q Consensus 214 ~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~~~~ 293 (350)
+|.- -=++||+|.||..|++.|+... .+.+++.|.... .|+ +..+...|++.++. + +..||
T Consensus 165 ~v~a-fqtrnP~Hr~H~~l~~~a~~~~-~~~llv~p~~g~-~k~--~di~~~~R~~~~~~------------~--~~~~~ 225 (546)
T 2gks_A 165 KIVA-FQTRNPMHRVHEELTKRAMEKV-GGGLLLHPVVGL-TKP--GDVDVYTRMRIYKV------------L--YEKYY 225 (546)
T ss_dssp CEEE-ECCSSCCCHHHHHHHHHHHHHH-TSEEEECCBCSB-CCT--TSCCHHHHHHHHHH------------H--HHHHS
T ss_pred cEEE-EecCCCCcHHHHHHHHHHHHhc-CCcEEEEeCcCC-CCC--CCCCHHHHHHHHHH------------H--HHhcC
Confidence 3433 3469999999999999988743 244555444333 333 34678999998753 1 22556
Q ss_pred CC-cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecCCC
Q 018839 294 PG-SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRNID 343 (350)
Q Consensus 294 p~-~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~~~ 343 (350)
|. -.++...+...+ |-.+. +.++.++-+ ...||+-++++|..-
T Consensus 226 p~~~v~~~~~p~~m~-----~agpr-ea~~ha~ir-~n~G~th~ivgrdha 269 (546)
T 2gks_A 226 DKKKTILAFLPLAMR-----MAGPR-EALWHGIIR-RNYGATHFIVGRDHA 269 (546)
T ss_dssp CTTTEEECBBCCBCC-----CCTHH-HHHHHHHHH-HHTTCSEEEECTTTT
T ss_pred CCCcEEEeecCchhh-----ccCch-HHHHHHHHH-HhCCCCeEEECCCCC
Confidence 76 445555554222 22222 344554221 244677777788743
No 41
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=93.85 E-value=0.13 Score=52.02 Aligned_cols=54 Identities=20% Similarity=0.247 Sum_probs=36.6
Q ss_pred eEEEEeecCchhhHHH-HHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhc
Q 018839 214 RKIILSGSFNPLHDGH-LKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEK 273 (350)
Q Consensus 214 ~i~i~~GSFnP~H~gH-l~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~ 273 (350)
+|.- -.++||+|.|| ..|.+.+++. .+.+++.|... ..|+ +-.+..-|++..+.
T Consensus 190 ~v~a-fqtrnP~HraH~e~~~~~a~e~--~~~lll~pl~g-~~k~--~di~~~~r~~~~~~ 244 (511)
T 1g8f_A 190 RVVA-FQTRNPMHRAHRELTVRAAREA--NAKVLIHPVVG-LTKP--GDIDHHTRVRVYQE 244 (511)
T ss_dssp CEEE-EEESSCCCHHHHHHHHHHHHHH--TCEEEEEEBCS-BCST--TCCCHHHHHHHHHH
T ss_pred cEEE-EecCCCCchHHHHHHHHHHHHc--CCcEEEEECCC-CCCC--CCCCHHHHHHHHHH
Confidence 4444 55899999999 5566666664 34566766655 4443 33678999998764
No 42
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=93.42 E-value=0.095 Score=53.71 Aligned_cols=102 Identities=20% Similarity=0.188 Sum_probs=56.7
Q ss_pred eEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhccCCeEEEEchHhHHHHHHhC
Q 018839 214 RKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVGMTVIISNQPYFYKKAEFF 293 (350)
Q Consensus 214 ~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~~~~ 293 (350)
+|.. -=++||+|.||..|++.|++... +.+++.|... ..|+ +..+...|++.++. +.+.|
T Consensus 192 ~v~a-fqtrnP~Hr~H~~l~~~a~~~~~-~~llv~pl~g-~~k~--~di~~~~R~~~~~~---------------~~~~~ 251 (573)
T 1m8p_A 192 RVVA-FQTRNPMHRAHRELTVRAARSRQ-ANVLIHPVVG-LTKP--GDIDHFTRVRAYQA---------------LLPRY 251 (573)
T ss_dssp SEEE-ECCSSCCCHHHHHHHHHHHHHTT-CEEEECCBCC-CCCT--TCHHHHHHHHHHHH---------------HGGGS
T ss_pred eEEE-EeeCCCcchhhHHHHHHHHHhcC-CcEEEEeCCC-CCCC--CCCCHHHHHHHHHH---------------HHHhC
Confidence 3434 44699999999999999887743 3444433322 3333 34578888888653 22446
Q ss_pred CC-cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecCC
Q 018839 294 PG-SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRNI 342 (350)
Q Consensus 294 p~-~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~~ 342 (350)
|. ..++...+.. -+|-.+. +.++.++.+ ...||+.++++|..
T Consensus 252 p~~~v~l~~~p~~-----m~~agpr-ea~~ha~ir-~n~G~th~ivgrdh 294 (573)
T 1m8p_A 252 PNGMAVLGLLGLA-----MRMGGPR-EAIWHAIIR-KNHGATHFIVGRDH 294 (573)
T ss_dssp STTSEEECBBCCC-----CCCCHHH-HHHHHHHHH-HHHTCSEEEECTTT
T ss_pred CCCcEEEEecCch-----hhccCch-HHHHHHHHH-HHCCCCeEEECCCC
Confidence 66 3444444431 1222222 334444221 23467777778863
No 43
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=89.90 E-value=0.63 Score=48.18 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=62.0
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhc-C----CCeeEEEEccCCCCCCCCCCCcHHHHHHHHhccCCeEEEEchHhHH
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRIC-G----NGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVGMTVIISNQPYFY 287 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~-~----~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~g~~v~is~~~~f~ 287 (350)
++|.-|- +-||+|.||-.|.+.|++.. . .+-+++-|-. -..|+ +-.+..-|++..+.
T Consensus 413 ~~Vvafq-trNP~HraHe~l~~~a~~~~~d~g~~~~~lll~pl~-G~tk~--~di~~~~r~~~~~~-------------- 474 (630)
T 1x6v_B 413 DAVSAFQ-LRNPVHNGHALLMQDTHKQLLERGYRRPVLLLHPLG-GWTKD--DDVPLMWRMKQHAA-------------- 474 (630)
T ss_dssp SEEEEEE-ESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEEEEBC-SCCCT--TSCCHHHHHHHHHH--------------
T ss_pred CeEEEEe-cCCCccHHHHHHHHHHHHHHHhhccCCCcEEEEeCc-CCCCC--CCCCHHHHHHHHHH--------------
Confidence 5666664 79999999999999998752 2 1124444443 34443 34578889887542
Q ss_pred HHHH--hCCC-cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecCC
Q 018839 288 KKAE--FFPG-SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRNI 342 (350)
Q Consensus 288 ~l~~--~~p~-~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~~ 342 (350)
+.+ |||. -.++.+..+.. -|.+-.+.++.++.+ .+.||+.++++|..
T Consensus 475 -~~~~~y~p~~~~~l~~~p~~m------ryaGPrEa~~hai~r-kN~Gcth~IVGrdh 524 (630)
T 1x6v_B 475 -VLEEGVLNPETTVVAIFPSPM------MYAGPTEVQWHCRAR-MVAGANFYIVGRDP 524 (630)
T ss_dssp -HHHTTSSCGGGEEECCBCCCC------CCCHHHHHHHHHHHH-HHTTCSEEEECSST
T ss_pred -HHHcCCCCCcceEEeeccchh------hhcCcHHHHHHHHHH-HhCCCCeEEECCCC
Confidence 223 5665 55555555522 233233455555332 34478888888873
No 44
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=89.89 E-value=0.57 Score=43.73 Aligned_cols=64 Identities=20% Similarity=0.378 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHHhhcCCCeeEEEEccCCC--CCC---CCCCCcHHHHHHHHhccCCeEEEEchHhHHHHHHhCCC
Q 018839 225 LHDGHLKLLEVATRICGNGYPCFELSAVNA--DKP---PLSVSQIKDRVKQFEKVGMTVIISNQPYFYKKAEFFPG 295 (350)
Q Consensus 225 ~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~--~K~---~~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~~~~p~ 295 (350)
+|.||+.|+++|.+.. +.+++-+-.++. ..+ ..-+.++++++++|+..|..+.+. +.|. +.||+
T Consensus 34 lH~GH~~LI~~a~~~a--~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~GvD~vf~--p~~~---~myp~ 102 (283)
T 3ag6_A 34 LHDGHLTMVRESVSTN--DITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVGADIVFH--PAVE---DMYPG 102 (283)
T ss_dssp CCHHHHHHHHHHHTTS--SEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHHTCSEEEC--CCHH---HHSCS
T ss_pred ccHHHHHHHHHHHHhC--CEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhCCCCEEEe--CCHH---HCCCC
Confidence 9999999999999874 444444433321 111 122678999999999999877766 3443 77886
No 45
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=87.57 E-value=1 Score=41.76 Aligned_cols=64 Identities=20% Similarity=0.322 Sum_probs=44.4
Q ss_pred hhHHHHHHHHHHHhhcCCCeeEEEEccCCC--CCC---CCCCCcHHHHHHHHhccCCeEEEEchHhHHHHHHhCCC
Q 018839 225 LHDGHLKLLEVATRICGNGYPCFELSAVNA--DKP---PLSVSQIKDRVKQFEKVGMTVIISNQPYFYKKAEFFPG 295 (350)
Q Consensus 225 ~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~--~K~---~~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~~~~p~ 295 (350)
+|.||+.|+++|.+.. +.+++-+..++. .++ ..-+.+.++|+++|+..|..+.+. +.|. +.||+
T Consensus 28 lH~GH~~Li~~A~~~a--~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~GvD~vf~--p~f~---~m~p~ 96 (276)
T 1v8f_A 28 LHRGHLALVERARREN--PFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAGVDLLFA--PGVE---EMYPE 96 (276)
T ss_dssp CCHHHHHHHHHHHHHC--SEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTTCSEEEC--CCHH---HHSCT
T ss_pred ccHHHHHHHHHHHHhC--CEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhCCCCEEEe--CChH---hCCCc
Confidence 9999999999999985 555555544321 111 123678999999999999877663 3344 66776
No 46
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=87.20 E-value=1.5 Score=44.56 Aligned_cols=102 Identities=14% Similarity=0.214 Sum_probs=58.9
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhccCCeEEEEchHhHHHHHHh
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVGMTVIISNQPYFYKKAEF 292 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~~~ 292 (350)
++|.-| =+-||+|.+|..+++.+..... +.+++-|-.. ..|+ +-.+..-|++..+. +.+.
T Consensus 164 ~~v~af-qtrnp~Hrah~~~~~~~~~~~~-~~lll~pl~g-~~k~--~d~~~~~r~~~~~~---------------~~~~ 223 (552)
T 3cr8_A 164 RRIIAW-QARQPMHRAQYEFCLKSAIENE-ANLLLHPQVG-GDIT--EAPAYFGLVRSFLA---------------IRDR 223 (552)
T ss_dssp CSEEEE-CCSSCCCHHHHHHHHHHHHHTT-CEEEECCBCC-CCTT--TCTTHHHHHHHHHH---------------HGGG
T ss_pred CceEEE-ecCCCCchHHHHHHHHHHHhcC-CeEEEEeccC-CCCC--CCCCHHHHHHHHHH---------------HHHh
Confidence 456666 7799999999999988885432 3344433322 3333 34567888887543 3355
Q ss_pred CCC-cEEEEchhhhhhcCCCCccCCCcccHHHhhccCCCCCeeEEEEecC
Q 018839 293 FPG-SAFVIGADTAARLIDPKYYDGDPGKMVEVLSGCKRTGCTFIVAGRN 341 (350)
Q Consensus 293 ~p~-~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~l~~~~~~~~V~~R~ 341 (350)
||. ..++.+.... -+ |.+-.+.++.++.+ .+.||+.++++|.
T Consensus 224 ~p~~~~~l~~~p~~-----m~-~agprea~~ha~~r-~n~G~th~ivGrd 266 (552)
T 3cr8_A 224 FPAATTQLSLLPAP-----PP-EASGRALLLRAIVA-RNFGCSLLIAGGE 266 (552)
T ss_dssp SCGGGEEECBBCSC-----CC-CSCSHHHHHHHHHH-HHHTCSEEEC---
T ss_pred CCCccEEEeecchh-----hc-ccCcHHHHHHHHHH-HhCCCCeeeeCCC
Confidence 665 4554444432 22 33344666766432 3448888888997
No 47
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=85.86 E-value=1.3 Score=41.58 Aligned_cols=63 Identities=21% Similarity=0.314 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHHh-hcCCCeeEEEEccCCCCC---CC---CCCCcHHHHHHHHhccCCeEEEEchHhHHHHHHhCCC
Q 018839 225 LHDGHLKLLEVATR-ICGNGYPCFELSAVNADK---PP---LSVSQIKDRVKQFEKVGMTVIISNQPYFYKKAEFFPG 295 (350)
Q Consensus 225 ~H~gHl~m~~~a~~-~~~~d~v~~~~s~~n~~K---~~---~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~~~~p~ 295 (350)
+|.||+.|+++|.+ .. +.+++-+-.+ |.. +. .-+.++++++++|+..|..+.+. +.|. +.||+
T Consensus 44 LH~GH~sLI~~A~~~~a--~~vVvSffvn-P~qF~~~ed~~~yprtle~d~~lL~~~GVD~vf~--p~~~---~myP~ 113 (301)
T 3cov_A 44 LHEGHLALVRAAKRVPG--SVVVVSIFVN-PMQFGAGGDLDAYPRTPDDDLAQLRAEGVEIAFT--PTTA---AMYPD 113 (301)
T ss_dssp CCHHHHHHHHHHHTSTT--EEEEEEECCC-GGGCCSSSHHHHSCCCHHHHHHHHHHTTCCEEEC--CCHH---HHCTT
T ss_pred ccHHHHHHHHHHHHhcC--CEEEEEEcCC-hhhcCCccccccCCCCHHHHHHHHHhCCCCEEEe--CCHH---HCCCC
Confidence 99999999999998 64 4454444433 321 11 12578999999999999877766 4454 67776
No 48
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=78.17 E-value=4.6 Score=37.55 Aligned_cols=65 Identities=17% Similarity=0.307 Sum_probs=43.4
Q ss_pred eEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCC-CC----CCCCCcHHHHHHHHhccCCeEEEE
Q 018839 214 RKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNAD-KP----PLSVSQIKDRVKQFEKVGMTVIIS 281 (350)
Q Consensus 214 ~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~-K~----~~~~~~~~~R~~ml~~~g~~v~is 281 (350)
+|++ =.+..=+|.||+.|++.|.+.. |.+++-+-.++.. .+ ..-+.+.++++++|+..|..+.+.
T Consensus 23 ~ig~-VPTMG~LH~GH~sLi~~A~~~~--d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~GvD~vF~ 92 (283)
T 3uk2_A 23 RTAF-VPTMGNLHEGHLSLMRLARQHG--DPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKENVYVLFA 92 (283)
T ss_dssp SCEE-EEECSSCCHHHHHHHHHHHTTC--SSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTTTCSEEEC
T ss_pred eEEE-ECCCCcccHHHHHHHHHHHHhC--CEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHcCCCEEEe
Confidence 3443 3456679999999999999975 4555555443211 11 122568999999999888776643
No 49
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=68.75 E-value=11 Score=35.35 Aligned_cols=63 Identities=14% Similarity=0.238 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHHhhcCCCeeEEEEccCCCCC--CC----CCCCcHHHHHHHHhccCCeEEEEchHhHHHHHHhCCC
Q 018839 225 LHDGHLKLLEVATRICGNGYPCFELSAVNADK--PP----LSVSQIKDRVKQFEKVGMTVIISNQPYFYKKAEFFPG 295 (350)
Q Consensus 225 ~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K--~~----~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~~~~p~ 295 (350)
+|.||+.|+++|.+.. |.|++-+=. ||.. ++ .=+.+++..+++|+..|..+...--. .+.||+
T Consensus 54 LH~GHlsLi~~A~~~~--d~vVVSIFV-NP~QF~~~EDl~~YPRtle~D~~ll~~~GvD~vF~P~~-----~emYP~ 122 (314)
T 3inn_A 54 LHKGHLELVRRARVEN--DVTLVSIFV-NPLQFGANEDLGRYPRDLERDAGLLHDAQVDYLFAPTV-----SDMYPR 122 (314)
T ss_dssp CCHHHHHHHHHHHHHC--SEEEEEECC-CGGGSCTTSSTTTCCCCHHHHHHHHHHTTCSEEECCCH-----HHHCSS
T ss_pred cCHHHHHHHHHHHHhC--CEEEEEECC-ChhhcCCCccccccCCCHHHHHHHHHhCCCCEEECCCH-----HHcCCC
Confidence 9999999999999984 556555543 3321 11 11468999999999988776643222 266775
No 50
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=58.22 E-value=19 Score=33.37 Aligned_cols=53 Identities=23% Similarity=0.384 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHhhcCCCeeEEEEccCCCCC--CCCC----CCcHHHHHHHHhccCCeEEEE
Q 018839 225 LHDGHLKLLEVATRICGNGYPCFELSAVNADK--PPLS----VSQIKDRVKQFEKVGMTVIIS 281 (350)
Q Consensus 225 ~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K--~~~~----~~~~~~R~~ml~~~g~~v~is 281 (350)
+|.||+.|+++|.+ .|.|++-+=. ||.. +.-| +.+++.=+++|+..|..+.+.
T Consensus 36 LH~GHlsLv~~Ar~---~d~VVVSIFV-NP~QF~~~EDl~~YPRtle~D~~ll~~~gvD~vF~ 94 (285)
T 3mxt_A 36 LHDGHLSLVKHAKT---QDKVIVSIFV-NPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFI 94 (285)
T ss_dssp CCHHHHHHHHHHTT---SSEEEEEECC-CGGGCCTTSCTTTSCCCHHHHHHHHHHTTCSEEEC
T ss_pred ccHHHHHHHHHHHh---CCEEEEEecc-CccccCCchhhhcCCCCHHHHHHHHHHCCCCEEEC
Confidence 89999999999998 4566555544 3321 1111 357888888998888766543
No 51
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=57.39 E-value=17 Score=33.37 Aligned_cols=65 Identities=14% Similarity=0.296 Sum_probs=41.2
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCC-CC-CC----CCcHHHHHHHHhccCCeEEEE
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADK-PP-LS----VSQIKDRVKQFEKVGMTVIIS 281 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K-~~-~~----~~~~~~R~~ml~~~g~~v~is 281 (350)
++|++.+ +--=+|.||+.|+++|.+.. |.|++-+=. ||.. ++ -| +.+++.=+++|+..|..+...
T Consensus 24 ~~ig~VP-TMGaLH~GHlsLv~~Ar~~~--d~vVVSIFV-NP~QF~~~EDl~~YPRtle~D~~ll~~~gvD~vF~ 94 (264)
T 3n8h_A 24 QKIGFVP-TMGALHNGHISLIKKAKSEN--DVVIVSIFV-NPTQFNNPNDYQTYPNQLQQDIQILASLDVDVLFN 94 (264)
T ss_dssp SCEEEEE-ECSSCCHHHHHHHHHHHHHC--SEEEEEECC-CGGGCSCHHHHHHSCCCHHHHHHHHHHTTCSEEEC
T ss_pred CcEEEEC-CCcchhHHHHHHHHHHHHhC--CEEEEEEcc-CcccCCCcchhhcCCCCHHHHHHHHHHCCCCEEEC
Confidence 3455443 22358999999999999984 556555543 4432 11 11 356777788888888766543
No 52
>3mf7_A CIS-3-chloroacrylic acid dehalogenase; beta-alpha-beta motif, tautomerase, CIS-3-CHLO acid dehalogenase, isomerase, hydrolase; HET: PR4; 1.65A {Coryneform bacterium} PDB: 3mf8_A 2flt_A 2flz_A
Probab=56.76 E-value=50 Score=27.31 Aligned_cols=88 Identities=9% Similarity=0.093 Sum_probs=62.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhcCCCCCeEEEEecCcccCCCCCCCCcEEEE-EEEeCCeeEEEEEEeCCchhhHHHHH
Q 018839 66 NQFCSQQTAVNMALLAYNRALKLSRPGAPVLGVGFTGALASTHPKLGDHRFHL-STRTSDRLWVSTVTLSKGLRTREQED 144 (350)
Q Consensus 66 ~g~VS~e~a~~MA~~a~~~~~~l~~~~~~~~gia~Tg~ag~~~~k~g~g~~~i-~i~~~~~~~~~~~~l~~~~r~~~~~~ 144 (350)
++.-|+|--+++|+...+...+..+....++.+-++-. ++ +..|+ |.........+++.+..+ |+..|.+
T Consensus 9 ~~~~t~eqK~aLa~~It~a~~e~~~vP~~~v~Vif~e~------~~--~~~~~gG~~rsd~~v~I~i~~~~G-Rt~eqK~ 79 (149)
T 3mf7_A 9 QDRLTPSAKHAVAKAITDAHRGLTGTQHFLAQVNFQEQ------PA--GNVFLGGVQQGGDTIFVHGLHREG-RSADLKG 79 (149)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHTCCTTCCCCEEEEEEE------CT--TCCEETTEECCSCCEEEEEEEESC-CCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCcChHHEEEEEEEc------Cc--cceEECCEEcCCCEEEEEEEecCC-CCHHHHH
Confidence 46778899999999998877664333234556656422 12 34577 666566667778888777 9999988
Q ss_pred HHHHHHHHHHHHhccCCCc
Q 018839 145 KVSSHLLLKAMASACKVPA 163 (350)
Q Consensus 145 ~l~~~l~v~~i~~~~~~~~ 163 (350)
++ ..-+.+++.++++.+.
T Consensus 80 ~L-~~~I~~~l~~~~g~~~ 97 (149)
T 3mf7_A 80 QL-AQRIVDDVSVAAEIDR 97 (149)
T ss_dssp HH-HHHHHHHHHHHTTCCG
T ss_pred HH-HHHHHHHHHHHcCCCh
Confidence 88 6777888999999765
No 53
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=50.79 E-value=28 Score=32.24 Aligned_cols=54 Identities=17% Similarity=0.343 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHHhhcCCCeeEEEEccCCCCC-CC-CC----CCcHHHHHHHHhccCCeEEEE
Q 018839 225 LHDGHLKLLEVATRICGNGYPCFELSAVNADK-PP-LS----VSQIKDRVKQFEKVGMTVIIS 281 (350)
Q Consensus 225 ~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K-~~-~~----~~~~~~R~~ml~~~g~~v~is 281 (350)
+|.||+.|+++|.+.. |.+++-+= .||.. ++ -| +.+++.=+++|+..|..+...
T Consensus 36 LH~GHlsLv~~Ar~~~--d~vVVSIF-VNP~QF~~~EDl~~YPRtle~D~~~l~~~gvd~vF~ 95 (287)
T 3q12_A 36 LHEGHMTLVDEAKTRA--DVVVVTIF-VNPLQFERPDDLAHYPRTLQEDCEKLTRHGADLVFA 95 (287)
T ss_dssp CCHHHHHHHHHHHTTS--SEEEEEEC-CCGGGCSSHHHHHHSCCCHHHHHHHHHHHTCSEEEC
T ss_pred ccHHHHHHHHHHHHhC--CEEEEEec-cCcccCCCcchhhcCCCCHHHHHHHHHHCCCCEEEC
Confidence 9999999999999874 55655543 34432 11 11 356777788888878766543
No 54
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=33.16 E-value=51 Score=26.60 Aligned_cols=89 Identities=16% Similarity=0.034 Sum_probs=55.4
Q ss_pred CCHHHHHHHHHHHHHHHhhhcCCCCCeEEEEecCcccCCCCCCCCcEEEEEEEeCCeeEEEEEEeCCchhhHHHHHHHHH
Q 018839 69 CSQQTAVNMALLAYNRALKLSRPGAPVLGVGFTGALASTHPKLGDHRFHLSTRTSDRLWVSTVTLSKGLRTREQEDKVSS 148 (350)
Q Consensus 69 VS~e~a~~MA~~a~~~~~~l~~~~~~~~gia~Tg~ag~~~~k~g~g~~~i~i~~~~~~~~~~~~l~~~~r~~~~~~~l~~ 148 (350)
-|+|.-+++++...+...+..+....++.+-++-....+.-- +..|+|....+....+++.+..+ |+..|.+++ .
T Consensus 11 rs~e~k~~L~~~it~al~e~~~vP~~dv~vii~e~~~~~~~~---~~~ylg~~rs~~~v~I~I~~~~g-Rt~EqK~~L-~ 85 (136)
T 3mlc_A 11 RSREQRRAIADAVHDALVEVLAIPARDRFQILTAHDPSDIIA---EDAGLGFQRSPSVVIIHVFTQAG-RTIETKQRV-F 85 (136)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHCCCTTCCEEEEEEECGGGEEE---CCTTSSCCCCSCCEEEEEEEETT-CCHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcChhHEEEEEEEcCHHHccc---cccccCcCCCCCeEEEEEEECCC-CCHHHHHHH-H
Confidence 477888888888888766633322456666665332211000 00122333344567888887656 899999998 6
Q ss_pred HHHHHHHHhccCCCc
Q 018839 149 HLLLKAMASACKVPA 163 (350)
Q Consensus 149 ~l~v~~i~~~~~~~~ 163 (350)
.-+.++| ..++.+.
T Consensus 86 ~~it~~l-~~lg~~~ 99 (136)
T 3mlc_A 86 AAITESL-APIGVAG 99 (136)
T ss_dssp HHHHHHH-TTTTCCG
T ss_pred HHHHHHH-HHcCCCc
Confidence 7778888 9898766
No 55
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major}
Probab=25.73 E-value=27 Score=35.24 Aligned_cols=52 Identities=12% Similarity=0.022 Sum_probs=24.3
Q ss_pred cceeEEecCCCccccCCCceEEEEeecCc---hhhHHHHH------HHHHHHhhcCCCeeEEEEc
Q 018839 195 EICFKVYPFLNETQVFNEERKIILSGSFN---PLHDGHLK------LLEVATRICGNGYPCFELS 250 (350)
Q Consensus 195 ~~~~~~f~~~~~~~~~~~k~i~i~~GSFn---P~H~gHl~------m~~~a~~~~~~d~v~~~~s 250 (350)
.+.+..|++.... .++++.|.+.+.+ |+|+||+. ++...+++.+. .|.++.-
T Consensus 11 ~~~~~~~~~~~~~---~~~~~~i~~~~py~ng~lHiGH~r~~v~~D~laR~~r~~G~-~V~~~~g 71 (564)
T 3kfl_A 11 TLEAQTQGPGSMK---KQKVFFATTPIYYVNASPHIGHVYSTLIVDVLGRYHRVKGE-EVFVMTG 71 (564)
T ss_dssp ----------------CCCCEEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHHHTC-CEEEEEE
T ss_pred hhhhhhcCCcccc---CCCCEEEeCCCCCCCCCCCcchhHHHHHHHHHHHHHHHcCC-cEEEecC
Confidence 3345667665432 4567888877776 99999984 23333444455 3545443
No 56
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=25.14 E-value=87 Score=20.69 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=27.0
Q ss_pred EEEEeCCchhhHHHHHHHHHHHHHHHHHhccCCCcc
Q 018839 129 STVTLSKGLRTREQEDKVSSHLLLKAMASACKVPAT 164 (350)
Q Consensus 129 ~~~~l~~~~r~~~~~~~l~~~l~v~~i~~~~~~~~~ 164 (350)
.++.+.++ |+..|.+++ +.-+.+++.+.++.|.+
T Consensus 3 i~I~~~~g-rs~e~k~~l-~~~i~~~l~~~lg~p~~ 36 (62)
T 1otf_A 3 AQLYIIEG-RTDEQKETL-IRQVSEAMANSLDAPLE 36 (62)
T ss_dssp EEEEEESC-CCHHHHHHH-HHHHHHHHHHHHTCCGG
T ss_pred EEEEEcCC-CCHHHHHHH-HHHHHHHHHHHhCcCcc
Confidence 45666666 788888888 88889999999998763
No 57
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=23.93 E-value=94 Score=21.12 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=27.5
Q ss_pred EEEEeCCchhhHHHHHHHHHHHHHHHHHhccCCCcc
Q 018839 129 STVTLSKGLRTREQEDKVSSHLLLKAMASACKVPAT 164 (350)
Q Consensus 129 ~~~~l~~~~r~~~~~~~l~~~l~v~~i~~~~~~~~~ 164 (350)
+++.+..+ |+..|.++| ..-+.+++.+.++.|.+
T Consensus 3 i~I~~~~G-rs~eqk~~L-~~~it~~~~~~lg~p~~ 36 (65)
T 3ry0_A 3 IRVTLLEG-RSPQEVAAL-GEALTAAAHETLGTPVE 36 (65)
T ss_dssp EEEEEESC-CCHHHHHHH-HHHHHHHHHHHHCCCGG
T ss_pred EEEEEcCC-CCHHHHHHH-HHHHHHHHHHHhCcCcc
Confidence 45666666 899999998 88889999999998764
No 58
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=22.45 E-value=1.1e+02 Score=20.18 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=26.4
Q ss_pred EEEEeCCchhhHHHHHHHHHHHHHHHHHhccCCCc
Q 018839 129 STVTLSKGLRTREQEDKVSSHLLLKAMASACKVPA 163 (350)
Q Consensus 129 ~~~~l~~~~r~~~~~~~l~~~l~v~~i~~~~~~~~ 163 (350)
.++.+.++ |+..|.+++ +.-+.+++.+.++.+.
T Consensus 3 i~i~~~~g-rs~eqk~~l-~~~i~~~l~~~lg~~~ 35 (61)
T 2opa_A 3 VTVKMLEG-RTDEQKRNL-VEKVTEAVKETTGASE 35 (61)
T ss_dssp EEEEEESC-CCHHHHHHH-HHHHHHHHHHHHCCCG
T ss_pred EEEEEcCC-CCHHHHHHH-HHHHHHHHHHHhCcCc
Confidence 45666666 788888888 8888999999999876
No 59
>3n4h_A Putative tautomerase; CG10062, CIS-3-chloroacrylic acid dehalogenase, tautomerase superfamily, beta-alpha-beta motif, hydrolase; HET: PR7; 2.02A {Corynebacterium glutamicum} PDB: 3n4d_A* 3n4g_A
Probab=21.68 E-value=2.1e+02 Score=22.86 Aligned_cols=88 Identities=16% Similarity=0.178 Sum_probs=55.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhhcCCCCCeEEEEecCcccCCCCCCCCcEEEE-EEEeCCeeEEEEEEeCCchhhHHHHH
Q 018839 66 NQFCSQQTAVNMALLAYNRALKLSRPGAPVLGVGFTGALASTHPKLGDHRFHL-STRTSDRLWVSTVTLSKGLRTREQED 144 (350)
Q Consensus 66 ~g~VS~e~a~~MA~~a~~~~~~l~~~~~~~~gia~Tg~ag~~~~k~g~g~~~i-~i~~~~~~~~~~~~l~~~~r~~~~~~ 144 (350)
+|..|+|.-+++++...+...+..+....++.+-+.-.. + +..++ |..........++.+.++ |+..|.+
T Consensus 9 ~g~~s~e~k~~L~~~it~al~~~lg~p~~~v~V~i~e~~------~--~~~~~gG~~~s~~~~~I~i~~~~G-rt~eqk~ 79 (148)
T 3n4h_A 9 RIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVE------P--DSYFIAAQSASENHIWVQATIRSG-RTEKQKE 79 (148)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEC------G--GGCEETTEECCTTCEEEEEEEESC-CCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCcCcccEEEEEEEEC------h--HHeEECCEEccCcEEEEEEEEECC-CCHHHHH
Confidence 366788988999988888776633322345556554221 1 11111 222222335666676666 7888888
Q ss_pred HHHHHHHHHHHHhccCCCc
Q 018839 145 KVSSHLLLKAMASACKVPA 163 (350)
Q Consensus 145 ~l~~~l~v~~i~~~~~~~~ 163 (350)
++ ..-+.+++...++.+.
T Consensus 80 ~l-~~~l~~~l~~~lgi~~ 97 (148)
T 3n4h_A 80 EL-LLRLTQEIALILGIPN 97 (148)
T ss_dssp HH-HHHHHHHHHHHHTCCG
T ss_pred HH-HHHHHHHHHHHhCcCc
Confidence 88 8888999999999765
No 60
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=21.07 E-value=2.9e+02 Score=21.32 Aligned_cols=95 Identities=15% Similarity=0.113 Sum_probs=52.0
Q ss_pred ceEEEEeecCchhhHHHHHHHHHHHhhcCCCeeEEEEccCCCCCCCCCCCcHHHHHHHHhccCCeEEEEchHhHHHHHHh
Q 018839 213 ERKIILSGSFNPLHDGHLKLLEVATRICGNGYPCFELSAVNADKPPLSVSQIKDRVKQFEKVGMTVIISNQPYFYKKAEF 292 (350)
Q Consensus 213 k~i~i~~GSFnP~H~gHl~m~~~a~~~~~~d~v~~~~s~~n~~K~~~~~~~~~~R~~ml~~~g~~v~is~~~~f~~l~~~ 292 (350)
+.+.++-|+++| ++|+-.+++.+.+.-....+.+.+....+. ...+.+ +++..+..+.+ .+-...++.++
T Consensus 2 ~~~i~~~G~~~~-~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~-----~~~~~~---~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSN-EKNQSVLIKAVALSKYKQDIVLLLKGKGPD-----EKKIKL---LAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCST-TTTHHHHHHHHHTCTTGGGEEEEEECCSTT-----HHHHHH---HHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccch-hcCHHHHHHHHHHhccCCCeEEEEEeCCcc-----HHHHHH---HHHHcCCeEEE-eecCHHHHHHH
Confidence 357889999998 688888888776642222455555543221 112222 33333446665 33223455566
Q ss_pred CCC-cEEEEchhhhhhcCCCCccCCCcccHHHhhcc
Q 018839 293 FPG-SAFVIGADTAARLIDPKYYDGDPGKMVEVLSG 327 (350)
Q Consensus 293 ~p~-~~fviG~D~l~~l~d~kwy~~~~~~ile~~~~ 327 (350)
|.. -.+|+ |.++.+-+-.++|++..
T Consensus 72 ~~~adv~v~----------ps~~e~~~~~~~Eama~ 97 (166)
T 3qhp_A 72 LKTCTLYVH----------AANVESEAIACLEAISV 97 (166)
T ss_dssp HTTCSEEEE----------CCCSCCCCHHHHHHHHT
T ss_pred HHhCCEEEE----------CCcccCccHHHHHHHhc
Confidence 655 23332 44455554578887654
No 61
>1mww_A Hypothetical protein HI1388.1; structural genomics, structure 2 function project, S2F, unknown function; HET: GLU; 2.08A {Haemophilus influenzae} SCOP: d.80.1.4
Probab=21.07 E-value=1.1e+02 Score=23.92 Aligned_cols=84 Identities=15% Similarity=0.122 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHHHHhhhcCCCCCeEEEEecCcccCCCCCCCCcEEEEEEEeCCeeEEEEEEeCCchhhHHHHHHHHHH
Q 018839 70 SQQTAVNMALLAYNRALKLSRPGAPVLGVGFTGALASTHPKLGDHRFHLSTRTSDRLWVSTVTLSKGLRTREQEDKVSSH 149 (350)
Q Consensus 70 S~e~a~~MA~~a~~~~~~l~~~~~~~~gia~Tg~ag~~~~k~g~g~~~i~i~~~~~~~~~~~~l~~~~r~~~~~~~l~~~ 149 (350)
|.|..+++++...+.+.+..+....++.+-++-.-. .+.++|=.........++.+.++ |+..|.+++ ..
T Consensus 11 s~e~~~~l~~~i~~al~~~lg~p~~~~~v~i~~~~~--------~~~~~gg~~~~~~~~i~i~~~~g-rt~eqK~~l-~~ 80 (128)
T 1mww_A 11 LAPRREKLAEVIYNSLHLGLDIPKGKHAIRFLCLEK--------EDFYYPFDRSDDYTVIEINLMAG-RMEGTKKRL-IK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCTTSSCEEEEEECG--------GGEECCTTSCTTCEEEEEEEETT-CCHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHHHHHHHCcChHHEEEEEEEeCh--------HHeecCCCCCCCcEEEEEEECCC-CCHHHHHHH-HH
Confidence 667777788887776666333323444444442211 11111111112245667776666 899999999 78
Q ss_pred HHHHHHHhccCCCc
Q 018839 150 LLLKAMASACKVPA 163 (350)
Q Consensus 150 l~v~~i~~~~~~~~ 163 (350)
-+.++|.+.++.+.
T Consensus 81 ~l~~~l~~~lg~~~ 94 (128)
T 1mww_A 81 MLFSELEYKLGIRA 94 (128)
T ss_dssp HHHHHHHHHHCCCG
T ss_pred HHHHHHHHHhCcCh
Confidence 88899999999766
No 62
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=20.35 E-value=1.4e+02 Score=21.06 Aligned_cols=34 Identities=3% Similarity=0.012 Sum_probs=27.8
Q ss_pred EEEEeCCchh-hHHHHHHHHHHHHHHHHHhccCCCcc
Q 018839 129 STVTLSKGLR-TREQEDKVSSHLLLKAMASACKVPAT 164 (350)
Q Consensus 129 ~~~~l~~~~r-~~~~~~~l~~~l~v~~i~~~~~~~~~ 164 (350)
.++++..+ | +..|.+++ +.-+.+++.+.++.+.+
T Consensus 3 I~I~l~~G-rls~eqk~~L-~~~l~~~l~~~lgip~~ 37 (76)
T 1gyx_A 3 IDIKCFPR-ELDEQQKAAL-AADITDVIIRHLNSKDS 37 (76)
T ss_dssp EEEEESCC-CCCHHHHHHH-HHHHHHHHHHHHTCCGG
T ss_pred EEEEECCC-CCCHHHHHHH-HHHHHHHHHHHhCcCCc
Confidence 46677767 8 88888888 88889999999998763
Done!