Query 018841
Match_columns 350
No_of_seqs 209 out of 1392
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 04:29:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018841.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018841hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 5.5E-52 1.2E-56 395.3 30.7 258 57-349 63-330 (365)
2 KOG0697 Protein phosphatase 1B 100.0 2.8E-52 6.2E-57 366.6 23.2 270 55-348 18-290 (379)
3 PTZ00224 protein phosphatase 2 100.0 4.3E-48 9.3E-53 369.7 30.8 253 54-349 17-271 (381)
4 KOG0698 Serine/threonine prote 100.0 3.6E-47 7.8E-52 360.2 30.6 254 57-350 37-305 (330)
5 PF00481 PP2C: Protein phospha 100.0 6.5E-48 1.4E-52 353.8 20.3 246 60-341 1-254 (254)
6 KOG0699 Serine/threonine prote 100.0 1.8E-45 3.9E-50 334.0 19.6 170 157-350 328-504 (542)
7 KOG0700 Protein phosphatase 2C 100.0 2.4E-44 5.3E-49 334.3 22.1 253 72-336 84-378 (390)
8 COG0631 PTC1 Serine/threonine 100.0 1.9E-43 4E-48 324.5 23.9 247 55-349 4-252 (262)
9 cd00143 PP2Cc Serine/threonine 100.0 1.4E-39 3.1E-44 296.8 31.3 251 60-348 2-254 (254)
10 smart00332 PP2Cc Serine/threon 100.0 4.3E-39 9.3E-44 294.4 32.1 251 57-346 4-255 (255)
11 PRK14559 putative protein seri 100.0 7.3E-38 1.6E-42 314.9 27.4 244 57-349 373-635 (645)
12 KOG1323 Serine/threonine phosp 100.0 3.2E-30 6.9E-35 232.6 20.4 235 87-349 144-487 (493)
13 KOG1379 Serine/threonine prote 100.0 2.6E-28 5.7E-33 220.3 21.5 205 72-348 90-330 (330)
14 KOG0618 Serine/threonine phosp 99.9 4.4E-23 9.4E-28 208.2 17.2 244 56-349 519-772 (1081)
15 PF13672 PP2C_2: Protein phosp 99.8 1.2E-20 2.5E-25 168.2 14.1 187 64-315 3-195 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 1.9E-16 4E-21 139.0 22.2 185 60-333 5-192 (193)
17 TIGR02865 spore_II_E stage II 99.7 1.8E-14 4E-19 150.1 23.4 195 67-348 561-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 2.3E-12 5E-17 112.8 22.7 177 85-348 2-192 (193)
19 COG2208 RsbU Serine phosphatas 98.5 3.3E-05 7.1E-10 74.8 22.2 189 72-349 161-366 (367)
20 COG3700 AphA Acid phosphatase 66.4 7.5 0.00016 33.5 3.5 49 288-336 71-130 (237)
21 PRK06369 nac nascent polypepti 63.9 45 0.00097 26.6 7.3 62 248-311 14-84 (115)
22 PRK10693 response regulator of 53.4 1.9E+02 0.0041 26.9 13.0 105 73-191 150-259 (303)
23 PF09436 DUF2016: Domain of un 45.6 13 0.00028 27.0 1.4 17 286-303 26-42 (72)
24 TIGR00264 alpha-NAC-related pr 30.7 2.8E+02 0.0061 22.2 7.1 45 267-311 37-86 (116)
25 cd00534 DHNA_DHNTPE Dihydroneo 27.0 2E+02 0.0043 22.6 5.7 53 293-345 42-97 (118)
26 PRK15322 invasion protein OrgB 26.0 2.6E+02 0.0057 24.6 6.5 52 282-334 142-194 (210)
27 PRK03982 heat shock protein Ht 25.9 1E+02 0.0022 28.6 4.4 32 285-317 104-135 (288)
28 TIGR00525 folB dihydroneopteri 25.0 2.8E+02 0.0061 21.6 6.3 55 293-347 41-98 (116)
29 PRK05457 heat shock protein Ht 23.4 1.4E+02 0.0031 27.7 4.8 33 284-317 112-144 (284)
30 PRK11593 folB bifunctional dih 21.7 3.4E+02 0.0075 21.3 6.2 45 292-336 41-87 (119)
31 COG4079 Uncharacterized protei 20.3 6.7E+02 0.014 22.9 8.8 55 162-218 2-56 (293)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=5.5e-52 Score=395.26 Aligned_cols=258 Identities=30% Similarity=0.489 Sum_probs=223.2
Q ss_pred CceeEEEEeccCCCCCCCceEEEeeCC----------CCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCC
Q 018841 57 AGIRWGSVSLQGLREEMEDGAVIQSDG----------LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGK 126 (350)
Q Consensus 57 ~~~~~~~~s~~G~R~~nED~~~~~~~~----------~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~ 126 (350)
..++++..+++|.|+.|||++++..+. .....||+|||||||+.+++|+++.+.+.+.+.. .
T Consensus 63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~--------~ 134 (365)
T PLN03145 63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDE--------D 134 (365)
T ss_pred CceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhh--------c
Confidence 457889999999999999998775432 1235799999999999999999999999886521 1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCceeEEEEEeCCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCC
Q 018841 127 DFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQV 206 (350)
Q Consensus 127 ~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~ 206 (350)
....++++|.++|.++|..|....... ....+|||+++++|.++.+|++|+||||+|++|+|++++||.||++.+
T Consensus 135 ~~~~~~~al~~af~~~d~~~~~~~~~~-~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~---- 209 (365)
T PLN03145 135 FPREIEKVVSSAFLQTDTAFAEACSLD-ASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMC---- 209 (365)
T ss_pred cchhHHHHHHHHHHHHhHHHHhhhccc-cCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCC----
Confidence 234678889999999999987643222 234599999999999999999999999999999999999999999987
Q ss_pred CHHHHHHHHHcCCEEeCCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecC
Q 018841 207 SLQEIRRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS 286 (350)
Q Consensus 207 ~~~E~~ri~~~gg~i~~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~ 286 (350)
+.|+.||.++||+|.++|+.|.+++||||||..+|..+. ..+..++++|++..+++.+
T Consensus 210 -~~E~~RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~---------------------~~~~~vs~ePdv~~~~l~~ 267 (365)
T PLN03145 210 -SKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKG---------------------SDGGPLSAEPELMTTQLTE 267 (365)
T ss_pred -HHHHHHHHHcCCceecceECCcccccccccccccccccc---------------------ccCCCcceEEEEEEEECCC
Confidence 899999999999999999999999999999988763210 1123467899999999999
Q ss_pred CCeEEEEEcCCCcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCcEEEEEEcC
Q 018841 287 DAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLG 349 (350)
Q Consensus 287 ~~d~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvIvv~l~ 349 (350)
+|+|||||||||||+|++++++++++..+++..+++.+|+.|++.|+++++.||+|||||.|.
T Consensus 268 ~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~ 330 (365)
T PLN03145 268 EDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQ 330 (365)
T ss_pred CCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEee
Confidence 988999999999999999999999988888888999999999999999999999999999986
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-52 Score=366.62 Aligned_cols=270 Identities=30% Similarity=0.551 Sum_probs=241.7
Q ss_pred CCCceeEEEEeccCCCCCCCceEEEe---eCCCCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHH
Q 018841 55 GVAGIRWGSVSLQGLREEMEDGAVIQ---SDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAI 131 (350)
Q Consensus 55 ~~~~~~~~~~s~~G~R~~nED~~~~~---~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~ 131 (350)
+.++++||..|+||||-+|||++.+. ++..+.|.||+|||||.|...+.+++.+|.+.+...-.-.........+..
T Consensus 18 ~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~ 97 (379)
T KOG0697|consen 18 EGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENV 97 (379)
T ss_pred cCCceeeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHH
Confidence 45789999999999999999998664 445788999999999999999999999999988754332111223455688
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCcCCCCceeEEEEEeCCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHH
Q 018841 132 KKALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEI 211 (350)
Q Consensus 132 ~~~l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~ 211 (350)
+.-|+..|.++|+.+....+......++|||++.+++....+|++|+||||++++|+|+...-|.||+|++ |.|+
T Consensus 98 ~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~-----p~Ek 172 (379)
T KOG0697|consen 98 EKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYL-----PKEK 172 (379)
T ss_pred HhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCC-----hHHH
Confidence 99999999999999888776666666799999999999999999999999999999999999999999998 9999
Q ss_pred HHHHHcCCEEeCCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEE
Q 018841 212 RRIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFV 291 (350)
Q Consensus 212 ~ri~~~gg~i~~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~l 291 (350)
+||+.+||.|.-.||+|.|+|+|||||++||.-. +.+|..+.|+++|++..+..+..|+||
T Consensus 173 eRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~-------------------~kgp~eQlVSPEPev~~~~R~eedeFi 233 (379)
T KOG0697|consen 173 ERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVP-------------------GKGPTEQLVSPEPEVYIIERSEEDEFI 233 (379)
T ss_pred HHHhcCCCeEEEEEecceeeeehhccCcccccCC-------------------CCCchhcccCCCCceEEeeccccCcEE
Confidence 9999999999999999999999999999999421 246678999999999999998888999
Q ss_pred EEEcCCCcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCcEEEEEEc
Q 018841 292 LLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADL 348 (350)
Q Consensus 292 iL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvIvv~l 348 (350)
||++||+||.|+++|+.++|+..+.-+.+...+|..+++.++-.|++||+|+|++-|
T Consensus 234 vlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcf 290 (379)
T KOG0697|consen 234 VLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCF 290 (379)
T ss_pred EEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhccCccCceEEEEec
Confidence 999999999999999999999998888999999999999999999999999999976
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=4.3e-48 Score=369.73 Aligned_cols=253 Identities=31% Similarity=0.495 Sum_probs=215.5
Q ss_pred CCCCceeEEEEeccCCCCCCCceEEEeeCCCCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHHH
Q 018841 54 SGVAGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKK 133 (350)
Q Consensus 54 ~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 133 (350)
.+...+.++..+++|.|+.|||++++... +...+|+|||||||..+|+++++.|.+.+..... ....+
T Consensus 17 ~~~~~~~~g~~s~~G~R~~nED~~~v~~~--~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~----------~~~~~ 84 (381)
T PTZ00224 17 AGNSIFRCASACVNGYRESMEDAHLLYLT--DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPE----------PMTDE 84 (381)
T ss_pred CCCccEEEEEEeCCCCCCCCCCeeEeccC--CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccc----------cccHH
Confidence 56788999999999999999999876543 3446999999999999999999999876543211 11234
Q ss_pred HHHHHHHHHHHHHHHHHHhccCcCCCCceeEEEEEe-CCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHHH
Q 018841 134 ALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIG-RDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIR 212 (350)
Q Consensus 134 ~l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~-~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~~ 212 (350)
.|.++|..+|+.++... ..+|||+++++|. +++++++|+||||+|++|+|++++||.||++.+ +.|+.
T Consensus 85 ~l~~a~~~~d~~i~~~~------~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~-----~~E~~ 153 (381)
T PTZ00224 85 RMEELCLEIDEEWMDSG------REGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNN-----PGERQ 153 (381)
T ss_pred HHHHHHHHHHHHHHhcc------cCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCC-----HHHHh
Confidence 58899999999987531 2469999988886 579999999999999999999999999999987 78999
Q ss_pred HHHHcCCEEeCCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEEE
Q 018841 213 RIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVL 292 (350)
Q Consensus 213 ri~~~gg~i~~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~li 292 (350)
||.++||.+..+|++|.+.+||||||..+|.+.. .....+.|+++||+..+++.++ |+||
T Consensus 154 RI~~~gg~v~~~Rv~G~l~vTRalGd~~~K~~~~-------------------~~~~~~~v~~~Pdi~~~~l~~~-D~ll 213 (381)
T PTZ00224 154 RIEACGGRVVSNRVDGDLAVSRAFGDRSFKVKGT-------------------GDYLEQKVIAVPDVTHLTCQSN-DFII 213 (381)
T ss_pred HHHHccCEeccccccCceeeecccCCcccccccc-------------------cccccCcceeeeEEEEEECCCC-CEEE
Confidence 9999999999999999999999999998885321 0112356789999999999988 8999
Q ss_pred EEcCCCcc-cCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCcEEEEEEcC
Q 018841 293 LASDGLWD-YMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLG 349 (350)
Q Consensus 293 L~SDGl~d-~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvIvv~l~ 349 (350)
|||||||| .++++++.+++.+.+....+++.+|+.|++.|+.+|+.||||||||+|.
T Consensus 214 LaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~ 271 (381)
T PTZ00224 214 LACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRRGSKDNISCLIVQLK 271 (381)
T ss_pred EECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCCEEEEEEEee
Confidence 99999999 8999999999987776678899999999999999999999999999985
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-47 Score=360.16 Aligned_cols=254 Identities=40% Similarity=0.592 Sum_probs=221.3
Q ss_pred Ccee-EEEEeccCCCCCCCceEEEeeCC------CC-CeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCCh
Q 018841 57 AGIR-WGSVSLQGLREEMEDGAVIQSDG------LD-GFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDF 128 (350)
Q Consensus 57 ~~~~-~~~~s~~G~R~~nED~~~~~~~~------~~-~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~ 128 (350)
..+. .+.++.+|+|..|||++....+. .. ...||||||||||..+|+|+.++|+..+.+.+... ...
T Consensus 37 ~~~~~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~-----~~~ 111 (330)
T KOG0698|consen 37 ESYRLGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFP-----KDR 111 (330)
T ss_pred ccccceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcc-----cch
Confidence 3444 44558889999999999876653 22 47899999999999999999999999998876632 222
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhccCcCCCCceeEEEEEeCC-EEEEEEeccccEEEeeCC-ceeeCCCCCCCCCCCC
Q 018841 129 DAIKKALQEAFE-NVDMKLLNRLEMNAEEDESGATATVMFIGRD-ILFISHVGDCCVVLSRTG-KADVLTNPHRPYGSGQ 205 (350)
Q Consensus 129 ~~~~~~l~~a~~-~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~-~l~vanvGDSra~l~r~g-~~~~lt~dH~~~~~~~ 205 (350)
..++.++.++|. ++|..++.. ......+|+|++++++.++ +|||||+|||||++++.| ++++||.||+|+.
T Consensus 112 ~~~~~a~~~~F~~~~D~~~~~~---~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~--- 185 (330)
T KOG0698|consen 112 QDVKDALRRAFLTKTDSEFLEK---REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDR--- 185 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh---ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCc---
Confidence 568999999999 699999875 2224678888888888755 999999999999999766 8999999999987
Q ss_pred CCHHHHHHHHHcCCEEeC----CeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEE
Q 018841 206 VSLQEIRRIREAGGWISN----GRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQ 281 (350)
Q Consensus 206 ~~~~E~~ri~~~gg~i~~----~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~ 281 (350)
++|+.||.++||+|.. .||+|.|++||||||..+|. ++|+++|++..
T Consensus 186 --~~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~---------------------------~~v~a~Pei~~ 236 (330)
T KOG0698|consen 186 --EDERERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKS---------------------------QGVIAEPEIQQ 236 (330)
T ss_pred --HHHHHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcC---------------------------CcEecCCceEE
Confidence 8999999999999984 39999999999999999883 67899999999
Q ss_pred EEecCCCeEEEEEcCCCcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCcEEEEEEcCC
Q 018841 282 VSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLGR 350 (350)
Q Consensus 282 ~~l~~~~d~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvIvv~l~~ 350 (350)
..+.+.++||||+||||||.++++|++++|+..+.....+..++..|.+.|..+++.||||||||.|..
T Consensus 237 ~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~ 305 (330)
T KOG0698|consen 237 VKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSRGSKDNITVVVVRLKS 305 (330)
T ss_pred EEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhcCCCCCeEEEEEEecC
Confidence 999998899999999999999999999999987766789999999999999999999999999999863
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=6.5e-48 Score=353.81 Aligned_cols=246 Identities=42% Similarity=0.613 Sum_probs=207.8
Q ss_pred eEEEEeccCCCCCCCceEEEeeCC-----CCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHHHH
Q 018841 60 RWGSVSLQGLREEMEDGAVIQSDG-----LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKA 134 (350)
Q Consensus 60 ~~~~~s~~G~R~~nED~~~~~~~~-----~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 134 (350)
.+++.+.+|+|+.|||++++..+. .....+|+|||||||..+++++++.+...+.+..... ....+.++
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~------~~~~~~~a 74 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFN------DGNDIEEA 74 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHH------TCHHHHHH
T ss_pred CcCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccc------cccchhhc
Confidence 368889999999999999887633 4567899999999999999999999998777665532 11278899
Q ss_pred HHHHHHH-HHHHHHHHHHhccCcCCCCceeEEEEEeCCEEEEEEeccccEEEeeCCcee-eCCCCCCCCCCCCCCHHHHH
Q 018841 135 LQEAFEN-VDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKAD-VLTNPHRPYGSGQVSLQEIR 212 (350)
Q Consensus 135 l~~a~~~-~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSra~l~r~g~~~-~lt~dH~~~~~~~~~~~E~~ 212 (350)
|..+|.+ ++..+....+.. ....+|||+++++|.+++||+||+||||+|+++.+... +||.||++.+ +.|+.
T Consensus 75 l~~a~~~~~~~~~~~~~~~~-~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~-----~~E~~ 148 (254)
T PF00481_consen 75 LRQAFLAFTDESLYSDSENN-ESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSN-----PDERE 148 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-THTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTS-----HHHHH
T ss_pred ccceeeeccccccccccccc-ccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccch-----hhccc
Confidence 9999999 888888744333 66789999999999999999999999999999999888 9999999987 89999
Q ss_pred HHHHcCCEEe-CCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEE
Q 018841 213 RIREAGGWIS-NGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFV 291 (350)
Q Consensus 213 ri~~~gg~i~-~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~l 291 (350)
||+++||.+. .+|+.|.|++||||||..+|++. +++|+++|++..+++.++++||
T Consensus 149 RI~~~gg~v~~~~rv~g~l~~sRalGd~~~k~~~------------------------~~~v~~~P~i~~~~l~~~d~fl 204 (254)
T PF00481_consen 149 RIRKAGGRVSENGRVNGVLAVSRALGDFDLKPPG------------------------KPGVIAEPDISEVDLTPDDEFL 204 (254)
T ss_dssp HHHHTT-GEEETEEETTTBSSSB-EE-GGGTTCT------------------------SSSSB---EEEEEEEBTTEEEE
T ss_pred eeeccccccccchhhhhccccccccccccccccc------------------------cceeeeecccccccccccceEE
Confidence 9999999999 89999999999999999998522 3689999999999999997799
Q ss_pred EEEcCCCcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCc
Q 018841 292 LLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNI 341 (350)
Q Consensus 292 iL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNi 341 (350)
|||||||||++++++++++++........++.+|+.|++.|+++|+.|||
T Consensus 205 vlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 205 VLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp EEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTTHHSHE
T ss_pred EEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999988776668999999999999999999997
No 6
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-45 Score=333.99 Aligned_cols=170 Identities=37% Similarity=0.684 Sum_probs=159.1
Q ss_pred CCCCceeEEEEEeCCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHHHHHHHcCCEEe-CCeeecccccccc
Q 018841 157 DESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWIS-NGRICGDIAVSRA 235 (350)
Q Consensus 157 ~~~GsT~~~~~i~~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~~ri~~~gg~i~-~~rv~G~l~~tra 235 (350)
..+|||++||++.+.+|||||.||||+++.|+|+++-++.||.|.+ ..|..||.++||.|. +|||+|.|+++||
T Consensus 328 ~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPED-----evE~~RI~~AGG~vtlDGRVNGGLNLSRA 402 (542)
T KOG0699|consen 328 EDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPED-----EVETNRIHAAGGQVTLDGRVNGGLNLSRA 402 (542)
T ss_pred CCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCccc-----HHHHHHHHhcCCeEeecceecCccchhhh
Confidence 4689999999999999999999999999999999999999999987 799999999999998 8999999999999
Q ss_pred ccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEEEEEcCCCcccCChHHHHHHHHHHH
Q 018841 236 FGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQL 315 (350)
Q Consensus 236 lGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~liL~SDGl~d~l~~~ei~~~v~~~~ 315 (350)
|||+.||++.+ +++..++|++-|||....|++.++|+||++||+|++|+.+++++||+..|
T Consensus 403 ~GDHaYK~N~~-------------------Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l 463 (542)
T KOG0699|consen 403 FGDHAYKKNQE-------------------LPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLL 463 (542)
T ss_pred hhhhhhhcccC-------------------CChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHH
Confidence 99999997654 45566889999999999999999999999999999999999999999999
Q ss_pred HccCCHHHHHHHHHHHHHHcC------CCCCcEEEEEEcCC
Q 018841 316 QQHGDVQLACEALAQAALDQH------SQDNISIVIADLGR 350 (350)
Q Consensus 316 ~~~~~~~~~a~~L~~~A~~~~------~~DNiTvIvv~l~~ 350 (350)
.++.....+|+.|++.++... +.||+|+|++.|.|
T Consensus 464 ~~n~~ls~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkr 504 (542)
T KOG0699|consen 464 AKNSSLSEICEELCDACLAPSTDGDGTGCDNMTVIITTFKR 504 (542)
T ss_pred hcCchHHHHHHHHHHhhcCCCCCCCCcCCCcceEEEEEecc
Confidence 999999999999999998753 57999999999875
No 7
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-44 Score=334.32 Aligned_cols=253 Identities=30% Similarity=0.434 Sum_probs=210.4
Q ss_pred CCCceEEEeeCCCCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCC-------------------------
Q 018841 72 EMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGK------------------------- 126 (350)
Q Consensus 72 ~nED~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~------------------------- 126 (350)
..||++-+.....+++.|+||||||||.++++|++++|+.++...++......+.
T Consensus 84 ~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~ 163 (390)
T KOG0700|consen 84 AEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSAD 163 (390)
T ss_pred cccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccC
Confidence 4689886666657888999999999999999999999999999777753222211
Q ss_pred C-hHHHHHHHHHHHHHHHHHHHHHHHhc----cCcCCCCceeEEEEEeCCEEEEEEeccccEEEee---CC---ceeeCC
Q 018841 127 D-FDAIKKALQEAFENVDMKLLNRLEMN----AEEDESGATATVMFIGRDILFISHVGDCCVVLSR---TG---KADVLT 195 (350)
Q Consensus 127 ~-~~~~~~~l~~a~~~~~~~l~~~~~~~----~~~~~~GsT~~~~~i~~~~l~vanvGDSra~l~r---~g---~~~~lt 195 (350)
. ...+.++|.+||++++++++...... +....+||||++.++.+..|||||+|||||+|.+ +| .++|||
T Consensus 164 ~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS 243 (390)
T KOG0700|consen 164 QRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLS 243 (390)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecC
Confidence 1 46789999999999999998766443 5667899999999999999999999999999963 33 589999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHcCC----EEeC--CeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccC
Q 018841 196 NPHRPYGSGQVSLQEIRRIREAGG----WISN--GRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLN 269 (350)
Q Consensus 196 ~dH~~~~~~~~~~~E~~ri~~~gg----~i~~--~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~ 269 (350)
.||+.++ ++|+.||+..|. .|.. +||+|.|+|||||||.++|.++-.. .+-.++|+.+...+
T Consensus 244 ~dHn~~n-----e~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~-------e~l~~~fr~~~~~t 311 (390)
T KOG0700|consen 244 TDHNASN-----EDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQ-------EPLLEKFRIPYIGT 311 (390)
T ss_pred hhhcccc-----HHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhcc-------chhHhhcCCCCCCC
Confidence 9999988 999999999884 4444 5999999999999999999654221 11224788889999
Q ss_pred CCceeccceEEEEEecCCCeEEEEEcCCCcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcC
Q 018841 270 KDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQH 336 (350)
Q Consensus 270 ~~~v~~~p~~~~~~l~~~~d~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~ 336 (350)
+|+++++|+++.++|.+.|.||||+||||||+|+++|++.+|..++....+-+.+|+.|++.|+.+.
T Consensus 312 ~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 312 PPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred CCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999887654444677888888886643
No 8
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-43 Score=324.51 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=208.8
Q ss_pred CCCceeEEEEeccCC-CCCCCceEEEeeCCCCC-eEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHH
Q 018841 55 GVAGIRWGSVSLQGL-REEMEDGAVIQSDGLDG-FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIK 132 (350)
Q Consensus 55 ~~~~~~~~~~s~~G~-R~~nED~~~~~~~~~~~-~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~ 132 (350)
....+.++..+..|. |..|||++++..+.... ..||+|||||||+.+++++++.+.+.+.+.+.......... ...
T Consensus 4 ~~~~~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~--~~~ 81 (262)
T COG0631 4 GILSLKVAGLSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNE--SLE 81 (262)
T ss_pred ccceeeeeeeccCCCccCCCCcceeeccccCCcceeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccch--hHH
Confidence 346677788888886 88899999887643111 46999999999999999999999999999887532221111 178
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcCCCCceeEEEEEeCCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHHH
Q 018841 133 KALQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIR 212 (350)
Q Consensus 133 ~~l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~~ 212 (350)
+.|.+++..++..+............||||++++++.++++|+||+||||+|++|+|++++||.||++.+ ..+..
T Consensus 82 ~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~-----~~~~~ 156 (262)
T COG0631 82 ELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVN-----RLEQR 156 (262)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHH-----HHHHh
Confidence 9999999999999998766556778899999999999999999999999999999999999999999975 56666
Q ss_pred HHHHcCCEEeCCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEEE
Q 018841 213 RIREAGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVL 292 (350)
Q Consensus 213 ri~~~gg~i~~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~li 292 (350)
++...++....+|.+ .+|||||+..+ +.|++....+.++ ++||
T Consensus 157 ~~~~~~~~~~~~~~~---~ltralG~~~~---------------------------------~~p~~~~~~~~~~-d~ll 199 (262)
T COG0631 157 GIITPEEARSHPRRN---ALTRALGDFDL---------------------------------LEPDITELELEPG-DFLL 199 (262)
T ss_pred cCCCHHHHHhCccch---hhhhhcCCCcc---------------------------------cceeEEEEEcCCC-CEEE
Confidence 665555555555655 89999998662 5699999999999 9999
Q ss_pred EEcCCCcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCcEEEEEEcC
Q 018841 293 LASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLG 349 (350)
Q Consensus 293 L~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvIvv~l~ 349 (350)
||||||||.++++++.+++. ...+++++++.|++.|++.++.||+|+|+|++.
T Consensus 200 L~SDGl~d~v~~~~i~~il~----~~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~ 252 (262)
T COG0631 200 LCSDGLWDVVSDDEIVDILK----NSETPQEAADKLIELALEGGGPDNITVVLVRLN 252 (262)
T ss_pred EECCCCccCcCHHHHHHHHh----cCCCHHHHHHHHHHHHHhcCCCCceEEEEEEee
Confidence 99999999999999999995 468999999999999999999999999999874
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.4e-39 Score=296.83 Aligned_cols=251 Identities=38% Similarity=0.588 Sum_probs=217.4
Q ss_pred eEEEEeccCCCCCCCceEEEeeCCC-CCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHHHHHHHH
Q 018841 60 RWGSVSLQGLREEMEDGAVIQSDGL-DGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEA 138 (350)
Q Consensus 60 ~~~~~s~~G~R~~nED~~~~~~~~~-~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~a 138 (350)
.++..+.+|.|+.|||++.+..... .++.+|+|||||||+..++++++.+.+.+.+.+..... .....+...|.++
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~---~~~~~~~~~l~~~ 78 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLT---LSEEDIEEALRKA 78 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccc---cchHHHHHHHHHH
Confidence 4677788889999999998866421 25679999999999999999999999999887764321 2356788899999
Q ss_pred HHHHHHHHHHHHHhccCcCCCCceeEEEEEeCCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHHHHHHHcC
Q 018841 139 FENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAG 218 (350)
Q Consensus 139 ~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~~ri~~~g 218 (350)
|+.+++.+............+|||++++++.++.++++|+||||+|++|+++++++|.||++.+ +.|..||...+
T Consensus 79 ~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~-----~~~~~~i~~~~ 153 (254)
T cd00143 79 FLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVN-----EEERERIEKAG 153 (254)
T ss_pred HHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcC-----hHHHHHHHHcC
Confidence 9999999988765555667899999999999999999999999999999999999999999976 78999999999
Q ss_pred CEEeCCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEe-cCCCeEEEEEcCC
Q 018841 219 GWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSL-GSDAEFVLLASDG 297 (350)
Q Consensus 219 g~i~~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l-~~~~d~liL~SDG 297 (350)
|++...+..+...+||+||+..+| +++..+|++..+++ +++ ++|||||||
T Consensus 154 ~~~~~~~~~~~~~~t~~lG~~~~~----------------------------~~~~~~~~~~~~~l~~~~-d~ill~SDG 204 (254)
T cd00143 154 GRVSNGRVPGVLAVTRALGDFDLK----------------------------PGVSAEPDVTVVKLTEDD-DFLILASDG 204 (254)
T ss_pred CcEEeCEEcCceeeccccCCcccc----------------------------CCEEcCCeEEEEEeCCCC-cEEEEECCC
Confidence 998888888999999999998776 34578899999999 777 999999999
Q ss_pred CcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCcEEEEEEc
Q 018841 298 LWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADL 348 (350)
Q Consensus 298 l~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvIvv~l 348 (350)
|||+++++++.+++.....+ .+++++|+.|++.|..+++.||+|+|++++
T Consensus 205 ~~~~l~~~~i~~~~~~~~~~-~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 205 LWDVLSNQEAVDIVRSELAK-EDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred CeeccChHHHHHHHHHHhcc-cCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 99999999999998642111 279999999999999999999999999975
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=4.3e-39 Score=294.44 Aligned_cols=251 Identities=41% Similarity=0.657 Sum_probs=216.7
Q ss_pred CceeEEEEeccCCCCCCCceEEEeeCCCCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHHHHHH
Q 018841 57 AGIRWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQ 136 (350)
Q Consensus 57 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~ 136 (350)
..+.++..+.+|.|..|||++.+......+..+|+|||||||..+++++++.+.+.+.+..... ......+.+.|.
T Consensus 4 ~~~~~~~~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~ 79 (255)
T smart00332 4 LGLRYGLSSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKH----KDELEDVEEALR 79 (255)
T ss_pred CceeEEEecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhc----ccchhHHHHHHH
Confidence 3466777788889999999998876433567899999999999999999999998877654321 112246888999
Q ss_pred HHHHHHHHHHHHHHHhccCcCCCCceeEEEEEeCCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHHHHHHH
Q 018841 137 EAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIRE 216 (350)
Q Consensus 137 ~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~~ri~~ 216 (350)
+++..++..+............+|||++++++.++.++++|+||||+|++|++++.++|.||++.+ ..|..||..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~-----~~~~~~i~~ 154 (255)
T smart00332 80 KAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSN-----EDERARIEA 154 (255)
T ss_pred HHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcC-----HHHHHHHHH
Confidence 999999999988766555567799999999999999999999999999999999999999999976 789999999
Q ss_pred cCCEEeCCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEe-cCCCeEEEEEc
Q 018841 217 AGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSL-GSDAEFVLLAS 295 (350)
Q Consensus 217 ~gg~i~~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l-~~~~d~liL~S 295 (350)
.++.+..++..+...+||++|+..+| +.+..+|++...++ .++ ++|||||
T Consensus 155 ~~~~~~~~~~~~~~~lt~~~g~~~~~----------------------------~~i~~~p~~~~~~~~~~~-d~ill~S 205 (255)
T smart00332 155 AGGFVINGRVNGVLALSRAIGDFFLK----------------------------PYVSAEPDVTVVELTEKD-DFLILAS 205 (255)
T ss_pred cCCEEECCeECCeEecccccCCHhhc----------------------------CCeEeeeEEEEEEecCCC-cEEEEEC
Confidence 99999999999999999999987776 56788999999996 777 9999999
Q ss_pred CCCcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCcEEEEE
Q 018841 296 DGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIA 346 (350)
Q Consensus 296 DGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvIvv 346 (350)
|||||+++++++.+++.+.... .++..+|+.|++.|..++..||+|+||+
T Consensus 206 DGv~~~l~~~~i~~~~~~~~~~-~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 206 DGLWDVLSNQEVVDIVRKHLSK-SDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred CccccCCCHHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 9999999999999999754322 3689999999999999999999999985
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=7.3e-38 Score=314.95 Aligned_cols=244 Identities=20% Similarity=0.235 Sum_probs=186.4
Q ss_pred CceeEEEEeccCC-CCCCCceEEEeeCC----------CCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCC
Q 018841 57 AGIRWGSVSLQGL-REEMEDGAVIQSDG----------LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSG 125 (350)
Q Consensus 57 ~~~~~~~~s~~G~-R~~nED~~~~~~~~----------~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~ 125 (350)
..+.++..+++|. |+.|||++.+.... ..+..+|+|||||||+.+++.+++.+++.+.+.+.... .
T Consensus 373 ~~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~---~ 449 (645)
T PRK14559 373 VSLEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHW---Q 449 (645)
T ss_pred eeEEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhh---c
Confidence 3577889999997 99999998664321 11346899999999999888888887777776654321 0
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhcc--CcCCCCceeEEEEEeCCEEEEEEeccccEEEe-eCCceeeCCCCCCCCC
Q 018841 126 KDFDAIKKALQEAFENVDMKLLNRLEMNA--EEDESGATATVMFIGRDILFISHVGDCCVVLS-RTGKADVLTNPHRPYG 202 (350)
Q Consensus 126 ~~~~~~~~~l~~a~~~~~~~l~~~~~~~~--~~~~~GsT~~~~~i~~~~l~vanvGDSra~l~-r~g~~~~lt~dH~~~~ 202 (350)
.. ....+.|.++|..+|..|........ ....||||++++++.++++|++||||||+|++ |+|++++||.||++.
T Consensus 450 ~~-~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~- 527 (645)
T PRK14559 450 DE-LPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVG- 527 (645)
T ss_pred cc-ccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHH-
Confidence 11 12356799999999999987654433 44569999999999999999999999999988 578999999999983
Q ss_pred CCCCCHHHHHHHHHcCCEEe----CCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccce
Q 018841 203 SGQVSLQEIRRIREAGGWIS----NGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPD 278 (350)
Q Consensus 203 ~~~~~~~E~~ri~~~gg~i~----~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~ 278 (350)
..++ +.| +. .+|. +...+|||||+...+ ..+|+
T Consensus 528 -----~~lv----~~G--i~~~~a~~~p-~~~~LTrALG~~~~~-------------------------------~l~Pd 564 (645)
T PRK14559 528 -----QREI----QRG--VEPQIAYARP-DAYQLTQALGPRDNS-------------------------------AIQPD 564 (645)
T ss_pred -----HHHH----HhC--CCHHHHhcCc-ccceeeeccCCCCCC-------------------------------cccce
Confidence 2222 223 21 1232 346799999985543 35699
Q ss_pred EEEEEecCCCeEEEEEcCCCccc-CChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCcEEEEEEcC
Q 018841 279 IFQVSLGSDAEFVLLASDGLWDY-MNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLG 349 (350)
Q Consensus 279 ~~~~~l~~~~d~liL~SDGl~d~-l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvIvv~l~ 349 (350)
+..+.+.++ ++||||||||||+ +.+..+.+.+...+....+++++|+.|++.|+++|++||+|+|||++.
T Consensus 565 i~~~~L~~g-D~lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~ 635 (645)
T PRK14559 565 IQFLEIEED-TLLLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQYNGHDNITAILVRLK 635 (645)
T ss_pred EEEEEcCCC-CEEEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCcEEEEEEEec
Confidence 999999988 9999999999995 333344444455556677899999999999999999999999999985
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-30 Score=232.58 Aligned_cols=235 Identities=26% Similarity=0.386 Sum_probs=185.6
Q ss_pred eEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcc--------------------------------cCCCChHHHHHH
Q 018841 87 FSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLL--------------------------------LSGKDFDAIKKA 134 (350)
Q Consensus 87 ~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~--------------------------------~~~~~~~~~~~~ 134 (350)
..+|.+||||.|..++-.+++.+.+.+.+.+.+-.- ..-....-+..+
T Consensus 144 ~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LViGA 223 (493)
T KOG1323|consen 144 GALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVIGA 223 (493)
T ss_pred ceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhHHH
Confidence 579999999999999888888888777766552000 000012346789
Q ss_pred HHHHHHHHHHHHHHHHHhccCcCCCCceeEEEEEeCCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHHHHH
Q 018841 135 LQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRI 214 (350)
Q Consensus 135 l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~~ri 214 (350)
|+.||+.+|++|.+ +.......+|||+++++.--++||++|.||||++++|++++++|+.+.+| +.|++|+
T Consensus 224 lEsAFqemDeqiar--er~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTP-------etERqRl 294 (493)
T KOG1323|consen 224 LESAFQEMDEQIAR--ERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTP-------ETERQRL 294 (493)
T ss_pred HHHHHHHHHHHHHH--HHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCc-------HHHHHHH
Confidence 99999999999987 44556677999999999999999999999999999999999999999999 7999999
Q ss_pred HHcC-------------------------------------CEEe------------------CCeeeccccccccccCc
Q 018841 215 REAG-------------------------------------GWIS------------------NGRICGDIAVSRAFGDI 239 (350)
Q Consensus 215 ~~~g-------------------------------------g~i~------------------~~rv~G~l~~tralGd~ 239 (350)
+..+ ||-. +.|+.+.+.|||.|||+
T Consensus 295 Q~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH 374 (493)
T KOG1323|consen 295 QELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDH 374 (493)
T ss_pred HHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcc
Confidence 8753 1211 12667789999999999
Q ss_pred ccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecC----CCeEEEEEcCCCcccCChHHHHHHHHHHH
Q 018841 240 RFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGS----DAEFVLLASDGLWDYMNSSDAVKFVRNQL 315 (350)
Q Consensus 240 ~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~----~~d~liL~SDGl~d~l~~~ei~~~v~~~~ 315 (350)
.+|.. .++.+-+|++++.|+++.++|.. .||++||+||||||.++++|+..+|+.++
T Consensus 375 ~Lkv~-------------------dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L 435 (493)
T KOG1323|consen 375 HLKVV-------------------DSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFL 435 (493)
T ss_pred eeeee-------------------cCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhc
Confidence 98843 23344467888999999998764 25899999999999999999999999988
Q ss_pred HccC--CHH---HHHHHHHHHHHHc-------------CCCCCcEEEEEEcC
Q 018841 316 QQHG--DVQ---LACEALAQAALDQ-------------HSQDNISIVIADLG 349 (350)
Q Consensus 316 ~~~~--~~~---~~a~~L~~~A~~~-------------~~~DNiTvIvv~l~ 349 (350)
.... ||. .+|+.|+..|... ++.|||||.||.|.
T Consensus 436 ~~~dp~Dp~RYt~aaqdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~ 487 (493)
T KOG1323|consen 436 PSTDPADPSRYTQAAQDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLK 487 (493)
T ss_pred CCCCCCChhHHHHHHHHHHHHhcCccCCCceeccCCCcCCCCceEEEEEecc
Confidence 6553 443 5678888777321 45699999999875
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-28 Score=220.27 Aligned_cols=205 Identities=20% Similarity=0.310 Sum_probs=161.4
Q ss_pred CCCceEEEeeCCCCCeEEEEEEcCCCChh-----HHHHHHHHHHHHHHHHHhcCcccCCCChHHHHHHHHHHHHHHHHHH
Q 018841 72 EMEDGAVIQSDGLDGFSFAAVFDGHGGVS-----TVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKL 146 (350)
Q Consensus 72 ~nED~~~~~~~~~~~~~~~~V~DG~GG~~-----~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~l 146 (350)
..||+|++..+ ....+.|||||+|||. .+.| +++|++.+.+..+. ....+.++...|.+|+.++
T Consensus 90 ~GEDa~Fvss~--~~~~v~GVADGVGGWa~~GiDpg~f-S~eLM~~ce~~v~~----~~~~~~~P~~lL~~ay~~l---- 158 (330)
T KOG1379|consen 90 GGEDAWFVSSN--PHAIVMGVADGVGGWAEYGIDPGAF-SRELMSNCERLVQN----SDFNPSDPVNLLEKAYAEL---- 158 (330)
T ss_pred CCCcceeeccC--cccceEEEccccchHhhcCcCHHHH-HHHHHHHHHHHhcc----cccCCCChHHHHHHHHHHH----
Confidence 58999999775 3445899999999997 4444 77888888888775 3555668899999999887
Q ss_pred HHHHHhccCcCCCCceeEEEEEe--CCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHHHHHHHcCCEEeCC
Q 018841 147 LNRLEMNAEEDESGATATVMFIG--RDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~GsT~~~~~i~--~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~~ri~~~gg~i~~~ 224 (350)
...+...-++||+|++.++ +++||++|+|||.+.++|+|+++.-|..+.++.|
T Consensus 159 ----~~~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN--------------------- 213 (330)
T KOG1379|consen 159 ----KSQKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFN--------------------- 213 (330)
T ss_pred ----hhcCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccC---------------------
Confidence 4445556688999999998 8899999999999999999999999999888653
Q ss_pred eeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCC--Ccee---ccceEEEEEecCCCeEEEEEcCCCc
Q 018841 225 RICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNK--DLVI---ASPDIFQVSLGSDAEFVLLASDGLW 299 (350)
Q Consensus 225 rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~v~---~~p~~~~~~l~~~~d~liL~SDGl~ 299 (350)
.+|+...+|.+ .++. -..+.+.+++++| |+|||+|||||
T Consensus 214 -----------------------------------~PyQLs~~p~~~~~~~~d~p~~ad~~~~~v~~G-DvIilATDGlf 257 (330)
T KOG1379|consen 214 -----------------------------------TPYQLSSPPEGYSSYISDVPDSADVTSFDVQKG-DVIILATDGLF 257 (330)
T ss_pred -----------------------------------CceeeccCCccccccccCCccccceEEEeccCC-CEEEEeccccc
Confidence 11111111110 0111 1357889999999 99999999999
Q ss_pred ccCChHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHc-----------------------CCCCCcEEEEEEc
Q 018841 300 DYMNSSDAVKFVRNQLQ-QHGDVQLACEALAQAALDQ-----------------------HSQDNISIVIADL 348 (350)
Q Consensus 300 d~l~~~ei~~~v~~~~~-~~~~~~~~a~~L~~~A~~~-----------------------~~~DNiTvIvv~l 348 (350)
|++.+++|..++..... ...+++..|+.|++.|... |+.||||+||..+
T Consensus 258 DNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 258 DNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred ccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 99999999999987766 5669999999999999654 4579999999753
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.90 E-value=4.4e-23 Score=208.18 Aligned_cols=244 Identities=24% Similarity=0.357 Sum_probs=202.6
Q ss_pred CCceeEEEEeccCCCCCCCceEEEeeCC-CCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHHHH
Q 018841 56 VAGIRWGSVSLQGLREEMEDGAVIQSDG-LDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKA 134 (350)
Q Consensus 56 ~~~~~~~~~s~~G~R~~nED~~~~~~~~-~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 134 (350)
..-+++|++...|.|..+--+.....++ .+.-+.|+++||-+......++.+.+.+++.+.++.. .+-.+.
T Consensus 519 ~~~~t~Gv~~~~gqrnk~c~~~~~v~nf~~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~--------~~et~~ 590 (1081)
T KOG0618|consen 519 AFLWTYGVAGVSGQRNKVCSRAVWVENFFLNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLY--------GNETEQ 590 (1081)
T ss_pred eeheeeccchhcccccchhhhhhhhhhcccCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhc--------cChHHH
Confidence 4567789999999988876554333222 2333689999999999999999999999998887742 112334
Q ss_pred HHHHHHHHHHHHHHHHHhccCcCCCCceeEEEEEeC--------CEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCC
Q 018841 135 LQEAFENVDMKLLNRLEMNAEEDESGATATVMFIGR--------DILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQV 206 (350)
Q Consensus 135 l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~~~~i~~--------~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~ 206 (350)
|+.+|...++++-. .....|..++.+.|.. .++++||+|+|.++++++|+..++|+..... .
T Consensus 591 mr~~fl~~~rklg~------~g~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~----v 660 (1081)
T KOG0618|consen 591 MRNTFLRLNRKLGE------EGQVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLE----V 660 (1081)
T ss_pred HHHHHHHHhhhhhh------hhccccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCccccccccc----C
Confidence 99999999998843 2234556666666653 3789999999999999999999988776443 1
Q ss_pred CHHHHHHHHHcCCEEe-CCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEec
Q 018841 207 SLQEIRRIREAGGWIS-NGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLG 285 (350)
Q Consensus 207 ~~~E~~ri~~~gg~i~-~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~ 285 (350)
.++|.+||+..+|+|. +++++|+...||++|..... |+|.+.|++..+.|.
T Consensus 661 ~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~----------------------------P~v~p~Phv~~~~Lt 712 (1081)
T KOG0618|consen 661 DREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLF----------------------------PHVLPDPHVSVVILT 712 (1081)
T ss_pred CHHHHHHHHHhcCeecCCCeeeceeeeeeeccccccc----------------------------ccccCCCceeeEecc
Confidence 2899999999999999 89999999999999988876 678899999999999
Q ss_pred CCCeEEEEEcCCCcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcCCCCCcEEEEEEcC
Q 018841 286 SDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQHSQDNISIVIADLG 349 (350)
Q Consensus 286 ~~~d~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvIvv~l~ 349 (350)
+.|++|||++-+||++|+-+++++.++ ...+|-.+|.+|++.|...|..||++|+|++|.
T Consensus 713 ~qdE~LIvgn~~lW~~Lsid~a~~~vR----n~~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~ 772 (1081)
T KOG0618|consen 713 EQDEFLIVGNKQLWSVLSIDTAVDAVR----NVEDPLLAAKKLCDLAQSYGCAENVSVLVVRLN 772 (1081)
T ss_pred cCceEEEEcchHHhhhccHHHHHHHHh----cCCchHHHHHHHHHHHHhcccccCeeEEEEEee
Confidence 999999999999999999999999996 568999999999999999999999999999985
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.85 E-value=1.2e-20 Score=168.25 Aligned_cols=187 Identities=21% Similarity=0.290 Sum_probs=107.9
Q ss_pred EeccCCCCCCCceEEEeeCCCCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHH-HHHHHHHHHHHH
Q 018841 64 VSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDA-IKKALQEAFENV 142 (350)
Q Consensus 64 ~s~~G~R~~nED~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~-~~~~l~~a~~~~ 142 (350)
.+++|.++.|||++.+... .+..+++|+||+||...++.++..+++.+.+.+.... ...... .+..++.+..++
T Consensus 3 ~sh~~~~~~nqD~~~~~~~--~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~ 77 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD--DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLL---SQESPSSIEALIRAIKKEI 77 (212)
T ss_dssp ----TTSSS--EEEEEE-T--CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSC---CCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC--CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcc---cccchHHHHHHHHHHHHHH
Confidence 4678999999999986554 3335779999999999888888888888887777532 111111 233333333333
Q ss_pred HHHH---HHHHHhccCcCCCCceeEEEEEeCCEEEEEEeccccEEE-eeCCceeeCCCCCCCCCCCCCCHHHHHHHHHcC
Q 018841 143 DMKL---LNRLEMNAEEDESGATATVMFIGRDILFISHVGDCCVVL-SRTGKADVLTNPHRPYGSGQVSLQEIRRIREAG 218 (350)
Q Consensus 143 ~~~l---~~~~~~~~~~~~~GsT~~~~~i~~~~l~vanvGDSra~l-~r~g~~~~lt~dH~~~~~~~~~~~E~~ri~~~g 218 (350)
...+ .............+||++++++.++.++++|+||||+|+ .++|++.+++.+|+.. ..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~---------~~~----- 143 (212)
T PF13672_consen 78 LSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGE---------YPN----- 143 (212)
T ss_dssp HHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHH---------HHH-----
T ss_pred HHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccch---------hhh-----
Confidence 3222 011122446677899999999999999999999999964 5899999999999731 111
Q ss_pred CEEeCCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEEEEEcCCC
Q 018841 219 GWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGL 298 (350)
Q Consensus 219 g~i~~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~liL~SDGl 298 (350)
.++.+..... ....++..+++.++ +.|+||||||
T Consensus 144 -------------~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~-d~ilL~SDG~ 177 (212)
T PF13672_consen 144 -------------QTRSLTGDDP--------------------------------EPDVQYGSIPLEEG-DVILLCSDGV 177 (212)
T ss_dssp -------------CTTSCCHHCC--------------------------------CTETEEEEEE--TT--EEEEE-HHH
T ss_pred -------------hhhccCcccc--------------------------------ccCCeEEEEEcCCC-CEEEEECcCc
Confidence 1222111100 12236777888888 9999999999
Q ss_pred cccCChHH-HHHHHHHHH
Q 018841 299 WDYMNSSD-AVKFVRNQL 315 (350)
Q Consensus 299 ~d~l~~~e-i~~~v~~~~ 315 (350)
|+.+...+ +..++...+
T Consensus 178 ~~~l~~~~~~~~~l~~~~ 195 (212)
T PF13672_consen 178 WDNLRSYEDLEQFLKDLW 195 (212)
T ss_dssp HTTS-HHHHHHHH-----
T ss_pred cccCCCHHHHHHHhhhcc
Confidence 99998655 666665543
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.76 E-value=1.9e-16 Score=139.05 Aligned_cols=185 Identities=15% Similarity=0.086 Sum_probs=131.7
Q ss_pred eEEEEeccCCCCCCCceEEEeeCCCCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHHHHHHHHH
Q 018841 60 RWGSVSLQGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAF 139 (350)
Q Consensus 60 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~ 139 (350)
.++.....+. ....|.+.+... .++..+++|+||||+...|.+++..+...+.+.+... ..+.+.+
T Consensus 5 ~~~~~~~p~~-~~~GD~~~~~~~-~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~------------~~~~~~l 70 (193)
T smart00331 5 LIAQYYEDAT-QVGGDFYDVVKL-PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEG------------ISLSQIL 70 (193)
T ss_pred EEEEEEcchH-hcCccEEEEEEe-CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcC------------CCHHHHH
Confidence 3444443333 457888876654 3456799999999988888888888888877665421 1244455
Q ss_pred HHHHHHHHHHHHhccCcCCCCceeEEEEE--eCCEEEEEEeccccEEEee-CCceeeCCCCCCCCCCCCCCHHHHHHHHH
Q 018841 140 ENVDMKLLNRLEMNAEEDESGATATVMFI--GRDILFISHVGDCCVVLSR-TGKADVLTNPHRPYGSGQVSLQEIRRIRE 216 (350)
Q Consensus 140 ~~~~~~l~~~~~~~~~~~~~GsT~~~~~i--~~~~l~vanvGDSra~l~r-~g~~~~lt~dH~~~~~~~~~~~E~~ri~~ 216 (350)
..+|+.+... ....+|+|++++++ ..++++++|+||+|+|+++ ++...+++.+.++
T Consensus 71 ~~~n~~l~~~-----~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~~---------------- 129 (193)
T smart00331 71 ERLNRAIYEN-----GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLGA---------------- 129 (193)
T ss_pred HHHHHHHHhc-----CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCCc----------------
Confidence 6666666542 24568999999998 6789999999999999998 6655555544322
Q ss_pred cCCEEeCCeeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEEEEEcC
Q 018841 217 AGGWISNGRICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASD 296 (350)
Q Consensus 217 ~gg~i~~~rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~liL~SD 296 (350)
.+|... ...++...++++++ |.|+|+||
T Consensus 130 ------------------~lG~~~---------------------------------~~~~~~~~~~l~~g-d~l~l~TD 157 (193)
T smart00331 130 ------------------PLGLEP---------------------------------DVEVDVRELTLEPG-DLLLLYTD 157 (193)
T ss_pred ------------------eeeeCC---------------------------------CCcceeEEEeeCCC-CEEEEECC
Confidence 223211 12366778899999 99999999
Q ss_pred CCcccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Q 018841 297 GLWDYMNSSDAVKFVRNQLQQHGDVQLACEALAQAAL 333 (350)
Q Consensus 297 Gl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~ 333 (350)
||||.++.+++.+++.+. ...+++++++.+.+.+.
T Consensus 158 Gl~e~~~~~~l~~~l~~~--~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 158 GLTEARNPERLEELLEEL--LGSPPAEIAQRILEELL 192 (193)
T ss_pred CccccCChHHHHHHHHHh--cCCCHHHHHHHHHHHHh
Confidence 999999999988888753 13468888888887764
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.65 E-value=1.8e-14 Score=150.09 Aligned_cols=195 Identities=18% Similarity=0.225 Sum_probs=138.1
Q ss_pred cCCCCCCCceEEEeeCCCCCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHHHHHHHHHHHHHHHH
Q 018841 67 QGLREEMEDGAVIQSDGLDGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKL 146 (350)
Q Consensus 67 ~G~R~~nED~~~~~~~~~~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~l 146 (350)
++.+..+.|.+.+... .++...++|+||+|....|..++..+.+.+.+.+..+ .+ ...++..+|..+
T Consensus 561 k~g~~vsGD~y~~~~l-~~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g-----~~-------~~~ai~~lN~~L 627 (764)
T TIGR02865 561 KDGELVSGDSYSFGKL-SAGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESG-----FD-------REVAIKTVNSIL 627 (764)
T ss_pred CCCCcccCceEEEEEE-CCCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcC-----CC-------HHHHHHHHHHHH
Confidence 3446678999877654 3555689999999966666666766666655544422 11 245667777766
Q ss_pred HHHHHhccCcCCCCceeEEEEEe--CCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHHHHHHHcCCEEeCC
Q 018841 147 LNRLEMNAEEDESGATATVMFIG--RDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNG 224 (350)
Q Consensus 147 ~~~~~~~~~~~~~GsT~~~~~i~--~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~~ri~~~gg~i~~~ 224 (350)
... ....+.+|+.+++++ .+++.++|+|+++.|+.|++++++++..+-|-
T Consensus 628 ~~~-----~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lPl----------------------- 679 (764)
T TIGR02865 628 SLR-----STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLPI----------------------- 679 (764)
T ss_pred HhC-----CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCcee-----------------------
Confidence 432 233468999998885 68999999999999999999988887655441
Q ss_pred eeeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEEEEEcCCCcccCCh
Q 018841 225 RICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNS 304 (350)
Q Consensus 225 rv~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~liL~SDGl~d~l~~ 304 (350)
|.+. ..+++....++.+| |+|+|+|||++|..++
T Consensus 680 ---Gil~------------------------------------------~~~~~~~~~~L~~G-D~Lll~SDGv~E~~~~ 713 (764)
T TIGR02865 680 ---GILD------------------------------------------EVDVELVRKKLKNG-DLIVMVSDGVLEGEKE 713 (764)
T ss_pred ---Eecc------------------------------------------CCccceEEEEeCCC-CEEEEECCCCCcCCcc
Confidence 1110 12466778899999 9999999999998765
Q ss_pred HH-HHHHHHHHHHc--cCCHHHHHHHHHHHHHHcC---CCCCcEEEEEEc
Q 018841 305 SD-AVKFVRNQLQQ--HGDVQLACEALAQAALDQH---SQDNISIVIADL 348 (350)
Q Consensus 305 ~e-i~~~v~~~~~~--~~~~~~~a~~L~~~A~~~~---~~DNiTvIvv~l 348 (350)
.+ -.+.+.+.+++ ..+|+++++.|++++.+.. ..||+|++++++
T Consensus 714 ~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 714 VEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred cccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 32 11223333333 4589999999999998753 379999999985
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.55 E-value=2.3e-12 Score=112.77 Aligned_cols=177 Identities=23% Similarity=0.265 Sum_probs=116.0
Q ss_pred CCeEEEEEEcCCCChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCceeE
Q 018841 85 DGFSFAAVFDGHGGVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRLEMNAEEDESGATAT 164 (350)
Q Consensus 85 ~~~~~~~V~DG~GG~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~GsT~~ 164 (350)
++..+++|+|+.|.--.|.+.+..+...+....... .+ ..+.+..+|+.+..... .....+|++
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~-----~~-------p~~~l~~ln~~l~~~~~----~~~~~~t~~ 65 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEG-----LD-------PEELLEALNRRLYRDLK----GDNRYATAC 65 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTT-----TS-------HHHHHHHHHHHHHHHTT----TTSTTEEEE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcC-----CC-------HHHHHHHHHHHHHHHhh----hccccceEE
Confidence 355689999999966666666666766666665432 12 34455555555543221 113678888
Q ss_pred EEEEe--CCEEEEEEeccccEEEeeC--CceeeCCCCCCCCCCCCCCHHHHHHHHHcCCEEeCCeeeccccccccccCcc
Q 018841 165 VMFIG--RDILFISHVGDCCVVLSRT--GKADVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGRICGDIAVSRAFGDIR 240 (350)
Q Consensus 165 ~~~i~--~~~l~vanvGDSra~l~r~--g~~~~lt~dH~~~~~~~~~~~E~~ri~~~gg~i~~~rv~G~l~~tralGd~~ 240 (350)
++.+. .+.++++|+|+++++++++ +....+.....+ +|-..
T Consensus 66 ~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~~-----------------------------------lG~~~ 110 (193)
T PF07228_consen 66 YAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLESEGPP-----------------------------------LGIFE 110 (193)
T ss_dssp EEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETCSSBB-----------------------------------CSSSC
T ss_pred EEEecccceEEEEeCCCCCCEEEEeccccceeecccCccc-----------------------------------eeeec
Confidence 88875 6689999999999999998 344444333222 12100
Q ss_pred cccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEEEEEcCCCcccCChHH-------HHHHHHH
Q 018841 241 FKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWDYMNSSD-------AVKFVRN 313 (350)
Q Consensus 241 ~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~liL~SDGl~d~l~~~e-------i~~~v~~ 313 (350)
...+....+++.+| |.|+|+||||+|....+. +.+++.+
T Consensus 111 ---------------------------------~~~~~~~~~~l~~g-d~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~ 156 (193)
T PF07228_consen 111 ---------------------------------DIDYQEQEIQLEPG-DRLLLYTDGLFEALNEDGEFFGEERLLELLDE 156 (193)
T ss_dssp ---------------------------------TTCEEEEEEE--TT-EEEEEECHHHCTTTCHHCHHCCCHHHHHHHHC
T ss_pred ---------------------------------cccccceEEEeccc-cEEEEeCCChhhccCCccchhHHHHHHHHHhh
Confidence 12355668899999 999999999999985443 2333332
Q ss_pred HHHccCCHHHHHHHHHHHHHHc---CCCCCcEEEEEEc
Q 018841 314 QLQQHGDVQLACEALAQAALDQ---HSQDNISIVIADL 348 (350)
Q Consensus 314 ~~~~~~~~~~~a~~L~~~A~~~---~~~DNiTvIvv~l 348 (350)
. ...+++++++.|++.+.+. ...||+|++++++
T Consensus 157 ~--~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~ 192 (193)
T PF07228_consen 157 N--RGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRR 192 (193)
T ss_dssp H--TTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE
T ss_pred c--cCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEE
Confidence 1 3467999999999999874 4679999999986
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.50 E-value=3.3e-05 Score=74.75 Aligned_cols=189 Identities=15% Similarity=0.109 Sum_probs=117.3
Q ss_pred CCCceEEEeeCCCCCeEEEEEEcCCC-ChhHHHHHHHHHHHHHHHHHhcCcccCCCChHHHHHHHHHHHHHHHHHHHHHH
Q 018841 72 EMEDGAVIQSDGLDGFSFAAVFDGHG-GVSTVKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNRL 150 (350)
Q Consensus 72 ~nED~~~~~~~~~~~~~~~~V~DG~G-G~~~a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~ 150 (350)
-.-|.+-+..... ...+++|.|..| |-.++ +....... ..+.+... ...++..+ ++.+|+.+...
T Consensus 161 vGGD~yd~~~~~~-~~~~i~I~DvsG~Gv~aa-l~m~~~~~-~~~~~~~~---~~~~p~~~-------l~~~n~~~~~~- 226 (367)
T COG2208 161 VGGDYYDFIQLGE-KRLRIGIGDVSGKGVPAA-LLMLMPKL-ALRLLLES---GPLDPADV-------LETLNRVLKQN- 226 (367)
T ss_pred cCCceEEEEEECC-cEEEEEEEeccCCCHHHH-HHHHHHHH-HHHHhhhc---ccCCHHHH-------HHHHHHHHHhc-
Confidence 4567775544433 445889999999 54444 33333332 23332211 12233333 33333333321
Q ss_pred HhccCcCCCCceeEEEEEe--CCEEEEEEeccccEEEeeCCce---eeCCCCCCCCCCCCCCHHHHHHHHHcCCEEeCCe
Q 018841 151 EMNAEEDESGATATVMFIG--RDILFISHVGDCCVVLSRTGKA---DVLTNPHRPYGSGQVSLQEIRRIREAGGWISNGR 225 (350)
Q Consensus 151 ~~~~~~~~~GsT~~~~~i~--~~~l~vanvGDSra~l~r~g~~---~~lt~dH~~~~~~~~~~~E~~ri~~~gg~i~~~r 225 (350)
....+-+|+...+++ .+.+..+|+|=--.++.+.++. ..+...
T Consensus 227 ----~~~~~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~~---------------------------- 274 (367)
T COG2208 227 ----LEEDMFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTAL---------------------------- 274 (367)
T ss_pred ----ccCCcEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccCC----------------------------
Confidence 122277888888885 6799999999999998886542 222221
Q ss_pred eeccccccccccCcccccchhhhhhcccCCCccccchhhccccCCCceeccceEEEEEecCCCeEEEEEcCCCcc-----
Q 018841 226 ICGDIAVSRAFGDIRFKTKKNEMLKKGVNEGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWD----- 300 (350)
Q Consensus 226 v~G~l~~tralGd~~~k~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~liL~SDGl~d----- 300 (350)
..++|..+ ...+.+....+.+| |.|++.|||+.|
T Consensus 275 -------g~piG~~~---------------------------------~~~~~~~~~~l~~g-d~lvl~tDGv~Ea~~~~ 313 (367)
T COG2208 275 -------GLPIGLLP---------------------------------DYQYEVASLQLEPG-DLLVLYTDGVTEARNSD 313 (367)
T ss_pred -------CceeeecC---------------------------------CccchheeEEecCC-CEEEEEcCCeeeeecCC
Confidence 12223211 23456778889998 999999999998
Q ss_pred --cCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHc----CCCCCcEEEEEEcC
Q 018841 301 --YMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQ----HSQDNISIVIADLG 349 (350)
Q Consensus 301 --~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~----~~~DNiTvIvv~l~ 349 (350)
.+..+...+.+.+ ....+++++++.+.+..... .-.||+|++++++.
T Consensus 314 ~~~~~~~~~~~~~~~--~~~~~~~e~~~~i~~~l~~~~~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 314 GEFFGLERLLKILGR--LLGQPAEEILEAILESLEELQGDQIQDDDITLLVLKVK 366 (367)
T ss_pred ccEecHHHHHHHHHH--HhCCCHHHHHHHHHHHHHHhhCCccccCceEEEEEEec
Confidence 5666777777654 24468888988888888663 33588999999975
No 20
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=66.39 E-value=7.5 Score=33.50 Aligned_cols=49 Identities=20% Similarity=0.312 Sum_probs=39.3
Q ss_pred CeEEEEEcCCCc-----------ccCChHHHHHHHHHHHHccCCHHHHHHHHHHHHHHcC
Q 018841 288 AEFVLLASDGLW-----------DYMNSSDAVKFVRNQLQQHGDVQLACEALAQAALDQH 336 (350)
Q Consensus 288 ~d~liL~SDGl~-----------d~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~~ 336 (350)
||-++..|.|+| |+|.++...+.|..-..+..=|++.|.+|+++-.++|
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 488899999998 6788888888886544455568999999999988886
No 21
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=63.94 E-value=45 Score=26.60 Aligned_cols=62 Identities=15% Similarity=0.239 Sum_probs=41.1
Q ss_pred hhhcccC--CCccccchhhccccCCCceeccceEEEEEecCCCeEEEEEcCCCcc-------cCChHHHHHHH
Q 018841 248 MLKKGVN--EGRWSEKFVSRVQLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWD-------YMNSSDAVKFV 311 (350)
Q Consensus 248 ~~~~g~~--~~~~~~~~~~~~~~~~~~v~~~p~~~~~~l~~~~d~liL~SDGl~d-------~l~~~ei~~~v 311 (350)
|.++|++ +- ...+.+.+... ..+|+..|+++.+.....+-|.|++..-.-| .+++++|.-++
T Consensus 14 mkkmGik~e~i-~v~~V~Ir~~~-~~~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~lv~ 84 (115)
T PRK06369 14 MKQMGIDVEEL-DVEEVIIRLKD-KEIVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIELVA 84 (115)
T ss_pred HHHcCCcchhc-CeEEEEEEeCC-EEEEEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHHHH
Confidence 4445655 33 33455555554 7888999999998887775688888877765 35666654433
No 22
>PRK10693 response regulator of RpoS; Provisional
Probab=53.44 E-value=1.9e+02 Score=26.87 Aligned_cols=105 Identities=11% Similarity=0.033 Sum_probs=52.6
Q ss_pred CCceEEEeeCCCCCeEEEEEEc--CCCChhH-HHHHHHHHHHHHHHHHhcCcccCCCChHHHHHHHHHHHHHHHHHHHHH
Q 018841 73 MEDGAVIQSDGLDGFSFAAVFD--GHGGVST-VKFLRDELYKECVAALQGGLLLSGKDFDAIKKALQEAFENVDMKLLNR 149 (350)
Q Consensus 73 nED~~~~~~~~~~~~~~~~V~D--G~GG~~~-a~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~ 149 (350)
.-|.+-+..-.... ..|.++| ||||+.+ +.++...+...+.+..... ....... ..+.+..+|+.+...
T Consensus 150 ~GD~~d~~~l~~~~-~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~---~~~~~~~----p~~~l~~lN~~l~~~ 221 (303)
T PRK10693 150 PGLVLDIAALSDND-LAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAH---QNQRLPE----LGALLKQVNHLLRQA 221 (303)
T ss_pred CccEEeeeecCCCc-EEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcc---cccccCC----HHHHHHHHHHHHHhc
Confidence 56776555433333 3444544 7776653 3333444333333221100 0000011 234455566665542
Q ss_pred HHhccCcCCCCceeEEEEEe--CCEEEEEEeccccEEEeeCCce
Q 018841 150 LEMNAEEDESGATATVMFIG--RDILFISHVGDCCVVLSRTGKA 191 (350)
Q Consensus 150 ~~~~~~~~~~GsT~~~~~i~--~~~l~vanvGDSra~l~r~g~~ 191 (350)
.. . .-.|+++.+++ .+.+.++|.|-...++..++++
T Consensus 222 ---~~--~-~~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 222 ---NL--P-GQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred ---CC--C-ceeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 11 1 12577777775 5689999999999885444444
No 23
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=45.63 E-value=13 Score=27.03 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=14.0
Q ss_pred CCCeEEEEEcCCCcccCC
Q 018841 286 SDAEFVLLASDGLWDYMN 303 (350)
Q Consensus 286 ~~~d~liL~SDGl~d~l~ 303 (350)
+| +.+++++||+|=-+.
T Consensus 26 ~G-~Rllva~nGv~lEv~ 42 (72)
T PF09436_consen 26 PG-HRLLVASNGVFLEVR 42 (72)
T ss_pred CC-cEEEEecCcEEEEEe
Confidence 56 999999999996543
No 24
>TIGR00264 alpha-NAC-related protein. This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.
Probab=30.75 E-value=2.8e+02 Score=22.16 Aligned_cols=45 Identities=4% Similarity=0.069 Sum_probs=32.3
Q ss_pred ccCCCceeccceEEEEEecCCCeEEEEEcCCCcc-----cCChHHHHHHH
Q 018841 267 QLNKDLVIASPDIFQVSLGSDAEFVLLASDGLWD-----YMNSSDAVKFV 311 (350)
Q Consensus 267 ~~~~~~v~~~p~~~~~~l~~~~d~liL~SDGl~d-----~l~~~ei~~~v 311 (350)
.+++.+|+..|.+..+......-|-|+++.-.-+ .++.++|.-++
T Consensus 37 ~~~k~ivf~~p~V~~m~~~G~~tYqI~G~~~~~~~~~~~~i~~eDI~lV~ 86 (116)
T TIGR00264 37 FDDEEWIFENPKVQVMDILGVKTYQITGKPKKEKVEEEEEITEDDIELVM 86 (116)
T ss_pred eCCceEEEecCeeEEEecCCcEEEEEecccEEeecccccCCCHHHHHHHH
Confidence 3457888999999999998776677887776544 36666655444
No 25
>cd00534 DHNA_DHNTPE Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenoty
Probab=27.03 E-value=2e+02 Score=22.55 Aligned_cols=53 Identities=19% Similarity=0.291 Sum_probs=39.1
Q ss_pred EEcCCCcccCChHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHc-CCCCCcEEEE
Q 018841 293 LASDGLWDYMNSSDAVKFVRNQLQQH--GDVQLACEALAQAALDQ-HSQDNISIVI 345 (350)
Q Consensus 293 L~SDGl~d~l~~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~-~~~DNiTvIv 345 (350)
-.||-+-+.++...+.+.+...+.+. ...+.+|+.+++..... ..-..+++-|
T Consensus 42 ~~~D~l~~tidY~~l~~~i~~~~~~~~~~llE~La~~ia~~i~~~~~~v~~v~v~v 97 (118)
T cd00534 42 GESDDLADTLNYAEVAKLIKKIVEGSPFKLIETLAEEIADILLEDYPKVSAIKVKV 97 (118)
T ss_pred hccCChhhccCHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHhCCCceEEEEEE
Confidence 46888989999999999998877643 46777888888888776 3334444444
No 26
>PRK15322 invasion protein OrgB; Provisional
Probab=26.03 E-value=2.6e+02 Score=24.65 Aligned_cols=52 Identities=10% Similarity=0.256 Sum_probs=40.1
Q ss_pred EEecCCCeEEEEEcCCCcccCChHHHHHHHHHHHHccCC-HHHHHHHHHHHHHH
Q 018841 282 VSLGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQHGD-VQLACEALAQAALD 334 (350)
Q Consensus 282 ~~l~~~~d~liL~SDGl~d~l~~~ei~~~v~~~~~~~~~-~~~~a~~L~~~A~~ 334 (350)
+....+ ..+|++||---=.+++++.++.....+....+ ....|+.|-+.++.
T Consensus 142 i~yhd~-~rFV~~~g~qIaEFsPq~~v~~a~~~l~~~~d~~~~~~r~ls~~~l~ 194 (210)
T PRK15322 142 LKYHQE-QRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAIN 194 (210)
T ss_pred EEEcCC-CceEEEeCCchhccCHHHHHHHHHHHHHhCccchHHHHHHHhHHHHH
Confidence 344444 77888888888888999999998888877665 77888888777754
No 27
>PRK03982 heat shock protein HtpX; Provisional
Probab=25.88 E-value=1e+02 Score=28.64 Aligned_cols=32 Identities=13% Similarity=0.364 Sum_probs=26.3
Q ss_pred cCCCeEEEEEcCCCcccCChHHHHHHHHHHHHc
Q 018841 285 GSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQ 317 (350)
Q Consensus 285 ~~~~d~liL~SDGl~d~l~~~ei~~~v~~~~~~ 317 (350)
.+. +.+|+-|||+.+.++++|+..++...+.+
T Consensus 104 ~~~-~~~V~vt~gLl~~l~~~El~AVlAHElgH 135 (288)
T PRK03982 104 DPK-HAVVAVTEGILNLLNEDELEGVIAHELTH 135 (288)
T ss_pred CCC-CeEEEeehHHHhhCCHHHHHHHHHHHHHH
Confidence 343 56788899999999999999999877743
No 28
>TIGR00525 folB dihydroneopterin aldolase. This model describes a bacterial dihydroneopterin aldolase, shown to form homo-octamers in E. coli. The equivalent activity is catalyzed by domains of larger folate biosynthesis proteins in other systems. The closely related parologous enzyme in E. coli, dihydroneopterin triphosphate epimerase, which is also homo-octameric, and dihydroneopterin aldolase domains of larger proteins, score below the trusted cutoff but may score well above the noise cutoff.
Probab=25.02 E-value=2.8e+02 Score=21.63 Aligned_cols=55 Identities=11% Similarity=0.187 Sum_probs=40.3
Q ss_pred EEcCCCcccCChHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHcCC-CCCcEEEEEE
Q 018841 293 LASDGLWDYMNSSDAVKFVRNQLQQH--GDVQLACEALAQAALDQHS-QDNISIVIAD 347 (350)
Q Consensus 293 L~SDGl~d~l~~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~~~-~DNiTvIvv~ 347 (350)
-.+|.+-+.++..++.+.+...+.+. .-.+.+|+.+++....... -+-+++-+-+
T Consensus 41 ~~~D~l~~tidY~~v~~~i~~~~~~~~~~llE~la~~Ia~~i~~~~~~v~~v~v~i~K 98 (116)
T TIGR00525 41 AESDDLGDTVNYAELYSAIEEIVAEKPRDLIETVAYRIADRLFADFPQVQRVKVRVSK 98 (116)
T ss_pred hccCCchhccCHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHCCCceEEEEEEEe
Confidence 45889999999999999998877643 3667788888888877633 4555555544
No 29
>PRK05457 heat shock protein HtpX; Provisional
Probab=23.40 E-value=1.4e+02 Score=27.67 Aligned_cols=33 Identities=12% Similarity=0.285 Sum_probs=27.5
Q ss_pred ecCCCeEEEEEcCCCcccCChHHHHHHHHHHHHc
Q 018841 284 LGSDAEFVLLASDGLWDYMNSSDAVKFVRNQLQQ 317 (350)
Q Consensus 284 l~~~~d~liL~SDGl~d~l~~~ei~~~v~~~~~~ 317 (350)
..+. ..+|+.|+|+.+.++++|+..++...+.+
T Consensus 112 ~~~~-~~~V~vt~gLl~~L~~~El~aVlAHElgH 144 (284)
T PRK05457 112 ASKN-NSLVAVSTGLLQNMSRDEVEAVLAHEISH 144 (284)
T ss_pred CCCC-CeEEEeehHHhhhCCHHHHHHHHHHHHHH
Confidence 3344 68899999999999999999999877743
No 30
>PRK11593 folB bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; Provisional
Probab=21.70 E-value=3.4e+02 Score=21.29 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=35.8
Q ss_pred EEEcCCCcccCChHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHcC
Q 018841 292 LLASDGLWDYMNSSDAVKFVRNQLQQH--GDVQLACEALAQAALDQH 336 (350)
Q Consensus 292 iL~SDGl~d~l~~~ei~~~v~~~~~~~--~~~~~~a~~L~~~A~~~~ 336 (350)
.-.||-+-+.++...+.+.+.....+. .-.+.+|+.+++.....-
T Consensus 41 a~~~Ddl~~tidY~~v~~~I~~~~~~~~~~LlE~la~~ia~~i~~~~ 87 (119)
T PRK11593 41 AAKSDDVADCLSYADIAETVISHVEGARFALVERVAEEVAELLLARF 87 (119)
T ss_pred cccccCHhhccCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHhhC
Confidence 355889999999999999998887644 367788899888887653
No 31
>COG4079 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.29 E-value=6.7e+02 Score=22.90 Aligned_cols=55 Identities=22% Similarity=0.254 Sum_probs=32.2
Q ss_pred eeEEEEEeCCEEEEEEeccccEEEeeCCceeeCCCCCCCCCCCCCCHHHHHHHHHcC
Q 018841 162 TATVMFIGRDILFISHVGDCCVVLSRTGKADVLTNPHRPYGSGQVSLQEIRRIREAG 218 (350)
Q Consensus 162 T~~~~~i~~~~l~vanvGDSra~l~r~g~~~~lt~dH~~~~~~~~~~~E~~ri~~~g 218 (350)
|++++++..+-..+| ||-|-+.+|..+...--..-.+|+....+.+|+.|..+.-
T Consensus 2 tLviay~gknGavia--GDrR~i~frgdee~re~lEekLYsGeIkteEEL~r~aeel 56 (293)
T COG4079 2 TLVIAYIGKNGAVIA--GDRREITFRGDEEDREKLEEKLYSGEIKTEEELARKAEEL 56 (293)
T ss_pred eEEEEEecCCCcEEe--ccceEEEEecChhHHHHHHHHhhcCccccHHHHHHHHHHc
Confidence 567777766665554 8999888886643222222223333333478888876643
Done!