Query 018843
Match_columns 350
No_of_seqs 129 out of 1216
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 04:30:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018843.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018843hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1444 Nucleotide-sugar trans 100.0 7.2E-38 1.6E-42 275.3 27.6 295 15-314 13-309 (314)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 9.9E-37 2.1E-41 280.4 32.8 294 15-310 3-298 (302)
3 PTZ00343 triose or hexose phos 100.0 2.2E-34 4.7E-39 268.9 34.6 292 12-306 47-349 (350)
4 KOG1441 Glucose-6-phosphate/ph 100.0 1.5E-34 3.3E-39 260.2 11.7 303 2-312 5-314 (316)
5 COG5070 VRG4 Nucleotide-sugar 100.0 1.6E-30 3.5E-35 215.8 16.5 285 17-312 9-303 (309)
6 PF08449 UAA: UAA transporter 100.0 2.4E-28 5.1E-33 224.5 32.3 282 20-311 7-303 (303)
7 PLN00411 nodulin MtN21 family 100.0 5.6E-28 1.2E-32 225.0 31.3 289 9-310 9-333 (358)
8 KOG1442 GDP-fucose transporter 100.0 7E-31 1.5E-35 224.2 3.7 298 11-314 25-336 (347)
9 KOG1443 Predicted integral mem 100.0 6E-27 1.3E-31 203.5 22.5 292 12-305 14-315 (349)
10 PRK11689 aromatic amino acid e 100.0 1.8E-25 4E-30 204.7 30.3 269 12-308 6-290 (295)
11 PRK11272 putative DMT superfam 100.0 5.8E-25 1.3E-29 201.1 32.7 261 29-308 23-288 (292)
12 PRK11453 O-acetylserine/cystei 100.0 8E-25 1.7E-29 200.9 32.7 274 15-308 9-290 (299)
13 PRK10532 threonine and homoser 99.9 8.9E-25 1.9E-29 199.9 32.2 255 28-309 26-285 (293)
14 TIGR00950 2A78 Carboxylate/Ami 99.9 2.1E-24 4.7E-29 194.2 28.8 252 31-301 6-260 (260)
15 PF06027 DUF914: Eukaryotic pr 99.9 2.4E-24 5.3E-29 196.7 28.9 271 29-311 28-311 (334)
16 PRK15430 putative chlorampheni 99.9 2E-24 4.2E-29 198.0 28.0 259 30-307 24-287 (296)
17 KOG1580 UDP-galactose transpor 99.9 3.2E-23 6.9E-28 173.8 16.9 258 39-305 49-313 (337)
18 KOG1581 UDP-galactose transpor 99.9 9.1E-22 2E-26 171.5 24.3 262 39-309 47-317 (327)
19 TIGR03340 phn_DUF6 phosphonate 99.9 1.7E-20 3.6E-25 170.8 25.5 260 26-302 13-280 (281)
20 COG0697 RhaT Permeases of the 99.9 5.5E-18 1.2E-22 154.4 32.7 259 30-306 23-288 (292)
21 TIGR00688 rarD rarD protein. T 99.8 3.7E-18 8.1E-23 153.3 27.6 231 29-280 17-255 (256)
22 COG5006 rhtA Threonine/homoser 99.8 6.8E-18 1.5E-22 143.6 27.1 252 33-310 31-287 (292)
23 KOG1582 UDP-galactose transpor 99.8 2.8E-18 6.1E-23 147.1 20.7 294 7-309 35-336 (367)
24 KOG2234 Predicted UDP-galactos 99.8 2.2E-16 4.8E-21 141.8 28.2 278 23-309 24-326 (345)
25 KOG1583 UDP-N-acetylglucosamin 99.8 1.6E-18 3.6E-23 149.0 12.0 282 17-311 7-320 (330)
26 KOG3912 Predicted integral mem 99.8 4.4E-17 9.5E-22 140.4 19.2 278 23-307 12-336 (372)
27 KOG4510 Permease of the drug/m 99.8 6.4E-20 1.4E-24 156.8 1.0 284 5-308 30-328 (346)
28 TIGR00776 RhaT RhaT L-rhamnose 99.8 1E-15 2.2E-20 139.6 27.2 245 33-305 20-288 (290)
29 PF04142 Nuc_sug_transp: Nucle 99.7 1.4E-16 2.9E-21 141.0 19.4 214 74-296 14-244 (244)
30 PF03151 TPT: Triose-phosphate 99.7 1.5E-16 3.2E-21 131.5 16.2 147 159-305 1-153 (153)
31 COG2962 RarD Predicted permeas 99.7 2.6E-14 5.6E-19 125.1 27.3 271 17-310 11-288 (293)
32 KOG2765 Predicted membrane pro 99.7 9.6E-16 2.1E-20 137.5 14.8 224 78-310 160-395 (416)
33 KOG2766 Predicted membrane pro 99.6 4.6E-16 9.9E-21 132.5 2.1 275 9-304 13-298 (336)
34 TIGR00803 nst UDP-galactose tr 99.4 8.1E-12 1.7E-16 109.7 11.8 192 101-303 2-222 (222)
35 KOG4314 Predicted carbohydrate 99.2 3.2E-11 6.9E-16 99.4 8.2 221 77-309 53-280 (290)
36 COG2510 Predicted membrane pro 99.2 1.3E-10 2.9E-15 89.1 9.0 135 160-305 5-139 (140)
37 PF00892 EamA: EamA-like trans 99.1 6.5E-10 1.4E-14 88.0 10.8 118 29-149 6-125 (126)
38 PF00892 EamA: EamA-like trans 99.0 1.2E-09 2.7E-14 86.3 8.1 124 168-304 1-125 (126)
39 PF13536 EmrE: Multidrug resis 99.0 3.4E-09 7.3E-14 82.8 9.8 105 48-154 2-110 (113)
40 COG2510 Predicted membrane pro 98.9 1.9E-08 4.1E-13 77.4 11.1 119 29-149 18-138 (140)
41 PRK15430 putative chlorampheni 98.8 3.2E-07 6.9E-12 84.2 17.3 138 156-304 6-144 (296)
42 PF06800 Sugar_transport: Suga 98.8 1.7E-06 3.8E-11 76.7 20.9 214 70-302 36-268 (269)
43 TIGR03340 phn_DUF6 phosphonate 98.7 1.7E-07 3.7E-12 85.3 12.5 130 160-305 3-135 (281)
44 TIGR00688 rarD rarD protein. T 98.7 9.7E-07 2.1E-11 79.2 16.8 140 158-304 2-141 (256)
45 TIGR00950 2A78 Carboxylate/Ami 98.5 6.6E-06 1.4E-10 73.8 17.2 119 26-146 140-260 (260)
46 PLN00411 nodulin MtN21 family 98.4 6.1E-06 1.3E-10 77.4 14.8 136 159-305 14-156 (358)
47 PF13536 EmrE: Multidrug resis 98.4 1.2E-05 2.5E-10 62.7 12.8 104 197-309 6-110 (113)
48 PRK02971 4-amino-4-deoxy-L-ara 98.3 2.7E-05 6E-10 61.8 14.4 121 158-308 2-125 (129)
49 PF05653 Mg_trans_NIPA: Magnes 98.3 5.5E-06 1.2E-10 75.7 11.5 215 86-308 59-295 (300)
50 PRK15051 4-amino-4-deoxy-L-ara 98.2 3.9E-05 8.5E-10 59.4 12.9 63 87-150 47-109 (111)
51 COG2962 RarD Predicted permeas 98.2 9.1E-05 2E-09 65.7 14.8 140 156-306 5-145 (293)
52 PRK10532 threonine and homoser 98.1 0.00026 5.6E-09 64.8 17.3 121 26-150 160-281 (293)
53 PRK11272 putative DMT superfam 98.1 0.00024 5.2E-09 65.0 16.7 108 43-151 177-286 (292)
54 PTZ00343 triose or hexose phos 98.0 0.00013 2.8E-09 68.5 13.9 134 160-305 51-186 (350)
55 PRK11689 aromatic amino acid e 98.0 0.00025 5.5E-09 65.0 15.0 77 73-150 211-287 (295)
56 PRK15051 4-amino-4-deoxy-L-ara 97.9 0.00011 2.3E-09 56.9 9.0 63 242-304 45-108 (111)
57 PF08449 UAA: UAA transporter 97.9 0.00058 1.3E-08 62.8 14.9 132 168-312 10-143 (303)
58 PRK11453 O-acetylserine/cystei 97.8 0.00054 1.2E-08 62.9 14.5 124 161-305 7-132 (299)
59 TIGR00817 tpt Tpt phosphate/ph 97.8 0.00031 6.7E-09 64.6 12.6 124 169-304 13-136 (302)
60 PF06027 DUF914: Eukaryotic pr 97.8 0.00094 2E-08 61.8 14.6 77 233-309 79-155 (334)
61 PRK10452 multidrug efflux syst 97.7 0.00026 5.7E-09 55.2 9.0 67 241-307 37-105 (120)
62 PF03151 TPT: Triose-phosphate 97.7 0.0031 6.7E-08 51.5 14.9 122 26-148 12-151 (153)
63 PRK13499 rhamnose-proton sympo 97.6 0.057 1.2E-06 50.2 25.1 226 72-306 68-342 (345)
64 TIGR00776 RhaT RhaT L-rhamnose 97.6 0.001 2.3E-08 60.7 11.9 131 159-306 2-137 (290)
65 PRK09541 emrE multidrug efflux 97.6 0.00063 1.4E-08 52.4 8.6 67 241-307 37-105 (110)
66 KOG2922 Uncharacterized conser 97.5 0.0013 2.8E-08 59.2 10.9 218 81-306 68-307 (335)
67 COG0697 RhaT Permeases of the 97.4 0.0054 1.2E-07 55.4 14.9 141 157-309 6-147 (292)
68 PF04142 Nuc_sug_transp: Nucle 97.4 0.0009 2E-08 59.4 9.2 79 231-309 15-93 (244)
69 COG2076 EmrE Membrane transpor 97.3 0.0017 3.6E-08 49.1 8.2 64 243-306 39-104 (106)
70 PRK02971 4-amino-4-deoxy-L-ara 97.3 0.0025 5.4E-08 50.7 9.1 72 80-152 50-124 (129)
71 PF04657 DUF606: Protein of un 97.2 0.019 4.2E-07 46.2 14.0 131 160-302 3-138 (138)
72 PRK10650 multidrug efflux syst 97.2 0.0026 5.5E-08 48.8 8.2 64 241-304 42-107 (109)
73 PRK10452 multidrug efflux syst 97.2 0.0034 7.4E-08 49.0 8.8 72 79-151 32-104 (120)
74 PRK11431 multidrug efflux syst 97.1 0.0032 6.9E-08 48.0 8.2 64 241-304 36-101 (105)
75 COG2076 EmrE Membrane transpor 97.1 0.01 2.2E-07 44.9 10.3 70 81-151 34-104 (106)
76 PRK11431 multidrug efflux syst 97.0 0.014 3.1E-07 44.4 10.9 68 82-150 34-102 (105)
77 PRK09541 emrE multidrug efflux 97.0 0.018 3.8E-07 44.4 11.0 68 83-151 36-104 (110)
78 COG4975 GlcU Putative glucose 96.9 0.0003 6.6E-09 60.7 0.8 217 70-305 52-285 (288)
79 PF05653 Mg_trans_NIPA: Magnes 96.9 0.0095 2.1E-07 54.6 10.2 119 156-306 5-123 (300)
80 PRK10650 multidrug efflux syst 96.8 0.035 7.6E-07 42.6 11.6 67 82-149 40-107 (109)
81 PRK13499 rhamnose-proton sympo 96.5 0.061 1.3E-06 50.0 12.6 138 157-306 6-154 (345)
82 KOG4510 Permease of the drug/m 96.5 0.0022 4.7E-08 56.2 2.9 68 240-307 104-171 (346)
83 PF00893 Multi_Drug_Res: Small 96.4 0.014 2.9E-07 43.6 6.4 54 243-296 38-93 (93)
84 PF06800 Sugar_transport: Suga 96.2 0.12 2.7E-06 46.2 12.8 71 74-146 193-267 (269)
85 PF07857 DUF1632: CEO family ( 96.2 0.024 5.1E-07 50.4 8.3 130 159-310 1-139 (254)
86 COG5006 rhtA Threonine/homoser 95.8 0.11 2.3E-06 45.6 9.9 55 92-147 225-279 (292)
87 PF04657 DUF606: Protein of un 95.8 0.77 1.7E-05 36.9 14.4 126 20-147 7-138 (138)
88 PF00893 Multi_Drug_Res: Small 95.7 0.11 2.3E-06 38.7 8.5 55 86-141 38-93 (93)
89 TIGR00803 nst UDP-galactose tr 95.6 0.31 6.8E-06 42.5 12.5 67 80-147 155-221 (222)
90 KOG2765 Predicted membrane pro 95.6 0.03 6.5E-07 51.6 6.0 78 233-310 159-236 (416)
91 KOG2234 Predicted UDP-galactos 95.4 1 2.2E-05 41.5 15.2 71 234-304 93-163 (345)
92 COG3238 Uncharacterized protei 95.2 0.94 2E-05 36.7 12.9 136 158-304 5-145 (150)
93 PF10639 UPF0546: Uncharacteri 94.0 0.17 3.8E-06 38.9 5.8 69 77-147 42-111 (113)
94 COG4975 GlcU Putative glucose 93.8 0.045 9.8E-07 47.7 2.6 132 159-308 3-139 (288)
95 COG5070 VRG4 Nucleotide-sugar 92.4 1.5 3.3E-05 37.8 9.5 128 18-147 159-293 (309)
96 KOG1581 UDP-galactose transpor 92.1 3.8 8.3E-05 37.1 12.1 135 12-147 170-310 (327)
97 PF06379 RhaT: L-rhamnose-prot 91.4 4.7 0.0001 37.3 12.2 140 157-309 6-157 (344)
98 KOG1441 Glucose-6-phosphate/ph 90.8 1 2.3E-05 41.4 7.5 132 15-149 164-306 (316)
99 COG3238 Uncharacterized protei 90.8 7.8 0.00017 31.5 14.2 130 17-149 8-145 (150)
100 KOG1580 UDP-galactose transpor 90.2 0.61 1.3E-05 40.5 5.1 67 244-310 96-162 (337)
101 KOG2922 Uncharacterized conser 89.1 0.22 4.7E-06 45.3 1.7 123 156-310 19-141 (335)
102 KOG1444 Nucleotide-sugar trans 88.9 7.7 0.00017 35.4 11.3 135 159-305 13-149 (314)
103 PF10639 UPF0546: Uncharacteri 88.2 1.3 2.8E-05 34.1 5.2 51 252-302 60-111 (113)
104 KOG4314 Predicted carbohydrate 87.2 0.68 1.5E-05 39.1 3.3 68 243-310 63-130 (290)
105 KOG3912 Predicted integral mem 82.1 28 0.00062 31.4 11.1 135 12-148 175-332 (372)
106 KOG2766 Predicted membrane pro 77.8 1.2 2.5E-05 39.4 1.3 70 239-308 84-153 (336)
107 PF05297 Herpes_LMP1: Herpesvi 75.3 0.92 2E-05 40.4 0.0 97 96-193 42-141 (381)
108 PRK02237 hypothetical protein; 70.7 12 0.00026 28.4 5.0 47 260-306 60-106 (109)
109 PF02694 UPF0060: Uncharacteri 66.4 14 0.00031 27.9 4.6 46 261-306 59-104 (107)
110 PF04342 DUF486: Protein of un 63.1 8.1 0.00017 29.2 2.8 29 274-302 77-105 (108)
111 PRK13108 prolipoprotein diacyl 59.3 1.2E+02 0.0025 29.8 10.7 25 285-309 254-278 (460)
112 PF07168 Ureide_permease: Urei 57.4 4.3 9.4E-05 36.8 0.6 70 232-304 71-145 (336)
113 PF08507 COPI_assoc: COPI asso 55.3 18 0.0004 28.8 3.9 31 272-304 73-104 (136)
114 KOG4831 Unnamed protein [Funct 53.6 20 0.00044 27.1 3.5 61 86-147 61-122 (125)
115 PF08627 CRT-like: CRT-like; 50.6 38 0.00083 26.5 4.7 53 8-60 51-104 (130)
116 PF01102 Glycophorin_A: Glycop 49.9 8.2 0.00018 30.2 1.0 10 302-311 85-94 (122)
117 PRK06638 NADH:ubiquinone oxido 49.8 1.6E+02 0.0036 25.1 10.7 21 276-296 135-155 (198)
118 PF02694 UPF0060: Uncharacteri 48.4 32 0.00069 26.1 3.9 45 106-151 60-104 (107)
119 PF15471 TMEM171: Transmembran 44.8 27 0.00058 31.1 3.4 26 287-312 161-186 (319)
120 PRK02237 hypothetical protein; 43.1 1.5E+02 0.0032 22.6 7.9 44 106-150 62-105 (109)
121 PRK10666 ammonium transporter; 43.0 3.2E+02 0.007 26.5 19.1 65 141-205 287-353 (428)
122 TIGR02865 spore_II_E stage II 40.4 4.6E+02 0.01 27.6 15.3 44 105-149 12-55 (764)
123 COG3169 Uncharacterized protei 39.8 55 0.0012 24.4 3.9 30 274-303 84-113 (116)
124 COG3162 Predicted membrane pro 39.2 1.6E+02 0.0034 22.1 6.2 55 12-66 26-86 (102)
125 COG3104 PTR2 Dipeptide/tripept 38.2 4.1E+02 0.0089 26.3 13.7 39 109-147 329-375 (498)
126 PHA03049 IMV membrane protein; 37.4 35 0.00076 23.3 2.4 23 288-310 5-27 (68)
127 PF07444 Ycf66_N: Ycf66 protei 37.3 21 0.00047 25.9 1.5 29 283-311 3-31 (84)
128 PRK15462 dipeptide/tripeptide 37.2 4.2E+02 0.0092 26.2 12.1 40 108-147 312-359 (493)
129 PF09586 YfhO: Bacterial membr 36.1 5.5E+02 0.012 27.2 12.7 18 26-44 318-335 (843)
130 COG1742 Uncharacterized conser 35.8 1.5E+02 0.0032 22.5 5.7 45 262-306 61-105 (109)
131 KOG1582 UDP-galactose transpor 35.4 3E+02 0.0065 25.0 8.4 56 98-154 281-336 (367)
132 KOG1623 Multitransmembrane pro 34.9 3.3E+02 0.007 24.2 10.4 42 262-303 163-204 (243)
133 PF15102 TMEM154: TMEM154 prot 34.8 53 0.0011 26.5 3.4 21 290-310 66-86 (146)
134 PF05961 Chordopox_A13L: Chord 33.6 21 0.00046 24.5 0.9 23 288-310 5-27 (68)
135 COG0004 AmtB Ammonia permease 33.1 4.5E+02 0.0098 25.3 16.7 84 113-200 240-325 (409)
136 COG5336 Uncharacterized protei 32.6 1.7E+02 0.0037 22.4 5.6 40 268-307 54-94 (116)
137 KOG1583 UDP-N-acetylglucosamin 32.2 55 0.0012 29.5 3.5 48 266-313 98-145 (330)
138 PF06946 Phage_holin_5: Phage 31.5 1.8E+02 0.0039 21.6 5.4 61 251-311 22-86 (93)
139 PF03806 ABG_transport: AbgT p 31.5 3.6E+02 0.0078 26.7 9.2 71 239-312 159-229 (502)
140 PF00909 Ammonium_transp: Ammo 29.8 5E+02 0.011 24.8 19.8 29 234-262 352-380 (399)
141 cd08764 Cyt_b561_CG1275_like N 29.2 3.8E+02 0.0083 23.2 14.6 23 287-309 175-197 (214)
142 PF04246 RseC_MucC: Positive r 28.6 58 0.0013 25.8 2.8 50 255-304 63-114 (135)
143 PF03729 DUF308: Short repeat 28.3 1.9E+02 0.004 19.3 6.0 24 136-159 2-25 (72)
144 TIGR00836 amt ammonium transpo 28.2 5.4E+02 0.012 24.7 18.5 28 234-261 356-383 (403)
145 PRK14774 lipoprotein signal pe 27.2 68 0.0015 27.1 3.1 7 289-295 133-139 (185)
146 TIGR00905 2A0302 transporter, 25.0 6.4E+02 0.014 24.5 13.7 23 288-310 417-439 (473)
147 COG1971 Predicted membrane pro 24.7 81 0.0018 26.7 3.0 43 260-302 41-84 (190)
148 PF04341 DUF485: Protein of un 24.3 2.1E+02 0.0046 20.9 5.0 54 12-65 18-77 (91)
149 PF05084 GRA6: Granule antigen 24.2 1.1E+02 0.0024 25.0 3.6 18 289-306 152-169 (215)
150 KOG1442 GDP-fucose transporter 23.5 24 0.00051 31.8 -0.3 53 251-303 120-172 (347)
151 PF08693 SKG6: Transmembrane a 23.2 61 0.0013 19.9 1.5 19 291-309 21-39 (40)
152 TIGR01167 LPXTG_anchor LPXTG-m 23.1 80 0.0017 18.0 2.0 17 284-300 9-25 (34)
153 PRK12437 prolipoprotein diacyl 22.8 58 0.0012 29.3 2.0 24 285-308 235-258 (269)
154 TIGR03644 marine_trans_1 proba 22.6 7E+02 0.015 24.0 18.9 88 113-204 253-341 (404)
155 PF04342 DUF486: Protein of un 21.8 3.7E+02 0.008 20.5 8.5 51 96-147 54-105 (108)
156 PF10624 TraS: Plasmid conjuga 21.4 4.2E+02 0.0091 21.0 7.6 36 94-129 61-96 (164)
157 KOG3762 Predicted transporter 21.4 7.5E+02 0.016 25.1 9.3 65 245-309 480-552 (618)
158 PF14150 YesK: YesK-like prote 20.7 3.3E+02 0.0072 19.6 9.4 40 175-215 17-56 (81)
159 PF06365 CD34_antigen: CD34/Po 20.3 1.3E+02 0.0029 25.8 3.5 17 293-309 112-128 (202)
No 1
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.2e-38 Score=275.34 Aligned_cols=295 Identities=36% Similarity=0.541 Sum_probs=268.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH--HHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHH
Q 018843 15 TSGLVVGYALCSSLLAVINKFAITKFNYPGLLTA--LQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIF 92 (350)
Q Consensus 15 ~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (350)
..+.++.|+++|+.++++||+++++++||-.+.. .|.+.+.+.+..+.+.|..+.|++++++.|+|+|.++++.++++
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~ 92 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLF 92 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHH
Confidence 3478999999999999999999998888776555 99999999999999999999999999999999999999999999
Q ss_pred HhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHH
Q 018843 93 TNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITT 172 (350)
Q Consensus 93 ~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~ 172 (350)
++..+++|+++++++++|+.+|+++++.+.+++|+| |++..|.++..+.+|......+|.+++..|+.|++.+.++.+.
T Consensus 93 t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~-~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~ 171 (314)
T KOG1444|consen 93 TGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKR-PSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAA 171 (314)
T ss_pred HccccccccCchHHHHHhhchHHHHHHhHHhhcCcC-chhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 7999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 018843 173 EMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFA 252 (350)
Q Consensus 173 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (350)
+.++.|+..+..+.+.+++++|+++.+++.++...++.||+.+. ..+.+.|..+.+|..+..+|+++++++|+.++
T Consensus 172 ~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l----~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ 247 (314)
T KOG1444|consen 172 FVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDAL----SLNFDNWSDSSVLVVMLLSCVMGFGISYTSFL 247 (314)
T ss_pred HHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHH----HhhcccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988889999999999999999999988889998822 22345677788999999999999999999999
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCCCC
Q 018843 253 ARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAP 314 (350)
Q Consensus 253 ~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~~~ 314 (350)
|.+..||++.++++......+.+.+.+++|++.++...+|..+.++|..+|++.+.++++.+
T Consensus 248 ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 248 CTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred HHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 99999999999999555555555555557799999999999999999999999987765443
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=9.9e-37 Score=280.36 Aligned_cols=294 Identities=18% Similarity=0.238 Sum_probs=233.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 018843 15 TSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTN 94 (350)
Q Consensus 15 ~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (350)
+.+.+..|+.+|+.++++||++++++++|..++++|+.++.+.+.+.+..+.++.++.++++++.+++.|++......++
T Consensus 3 ~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (302)
T TIGR00817 3 TGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTS 82 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34567777777999999999999999999999999999998887776544444555678889999999999998888899
Q ss_pred hhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHHHH
Q 018843 95 TNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEM 174 (350)
Q Consensus 95 ~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~ 174 (350)
+.+++|+++++++++++++|+++++++++++|||. +++++.+++++++|+++...+|.+++..|+++++++++++++|.
T Consensus 83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~-~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEF-PSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCC-cHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999995 89999999999999998876777777889999999999999999
Q ss_pred HHHHHHhhcCCCCcchhHHHHhHHHHH-HHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHH-HHHHHHHHHHH
Q 018843 175 VYIKHMVTNLGLNTWGFVLYNNLLSLI-ISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCV-FGLLISFFGFA 252 (350)
Q Consensus 175 v~~k~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 252 (350)
++.||..++.+.++++...|+...+.+ ++|+... .++.+............+.....+...+..+. .....+...+.
T Consensus 162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (302)
T TIGR00817 162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFI-TEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFM 240 (302)
T ss_pred HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHH-HcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998875567888899999988654 4444433 33222111110000000111122332333333 22333345557
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843 253 ARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 253 ~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
+++++||++.++.++++|++++++|++++||++|+.+++|+++++.|+++|++.|.++
T Consensus 241 ~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~ 298 (302)
T TIGR00817 241 LLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQK 298 (302)
T ss_pred HHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999765543
No 3
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=2.2e-34 Score=268.89 Aligned_cols=292 Identities=19% Similarity=0.261 Sum_probs=235.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCC--hhhhhHHHHHHHHHHH
Q 018843 12 YYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFT--FDTAKKFLPAAFVFYL 89 (350)
Q Consensus 12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 89 (350)
...+...++.|+.+|+..++.||++++.+|+|.+++.+|++++.+++.+++..+.++.++++ +++++++++.|++...
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~ 126 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLF 126 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 56666777778888999999999999999999999999999998887776665544444453 3468899999999887
Q ss_pred HHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHH
Q 018843 90 AIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVT 169 (350)
Q Consensus 90 ~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~ 169 (350)
.....+.++++++++.++++++++|+++++++++++|||+ +++++.+++++++|+.+...+|.++++.|++++++|+++
T Consensus 127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~-s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFL-NLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCc-cHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 7667789999999999999999999999999999999995 999999999999999999888888888999999999999
Q ss_pred HHHHHHHHHHHhhcCC-----CCcchhHHHHhHHHHH-HHHHHHHHhccHHHHHHHHHH---hcCCCCchhHHHHHHHHH
Q 018843 170 ITTEMVYIKHMVTNLG-----LNTWGFVLYNNLLSLI-ISPFFWFLTGEYGEVFAALVA---SAGSWFVPDVFFAVALSC 240 (350)
Q Consensus 170 ~a~~~v~~k~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 240 (350)
+++|.++.|+..++.+ .++.....++.+.+.+ ++|+.... |.......... +...+.....+..++.++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~ 283 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFF--EGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG 283 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence 9999999999887543 4454454455666544 44444323 32221111100 011111123344566677
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843 241 VFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 241 ~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~ 306 (350)
+..+..+.+.+.++++++|.++++.+++||++++++|++++||++|+.+++|.++++.|+++|++.
T Consensus 284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 778888888889999999999999999999999999999999999999999999999999999875
No 4
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=260.21 Aligned_cols=303 Identities=20% Similarity=0.305 Sum_probs=259.0
Q ss_pred CcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCCh-hhhh
Q 018843 2 SSIRFDSTKQYYTTSGLVVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTF-DTAK 78 (350)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~ 78 (350)
++.....++...........|.+++++..+.||++++ +|++|.+++..+..++.+.....+..+..+.++.+. ..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~ 84 (316)
T KOG1441|consen 5 SEPASGQLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLR 84 (316)
T ss_pred ccCcccccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchH
Confidence 3444555666677777788888889999999999999 899999999999999999999999888777666544 4699
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchH
Q 018843 79 KFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLT 158 (350)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~ 158 (350)
.+++++++...+.++.|.+++|+|+++++++|+++|+++.++++++.+|++ ++..+++++..+.|+++...+|.++|+.
T Consensus 85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~-s~~~~lsL~piv~GV~ias~~e~~fn~~ 163 (316)
T KOG1441|consen 85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTY-SSMTYLSLLPIVFGVAIASVTELSFNLF 163 (316)
T ss_pred HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCC-cceEEEEEEEeeeeEEEeeeccccccHH
Confidence 999999999999999999999999999999999999999999999999996 7888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh--cCCCCcchhHHHHhHHHHHH-H-HHHHHHhccHHHHHHHHHHhcCCCCchhHHH
Q 018843 159 AYSWAFAYLVTITTEMVYIKHMVT--NLGLNTWGFVLYNNLLSLII-S-PFFWFLTGEYGEVFAALVASAGSWFVPDVFF 234 (350)
Q Consensus 159 G~~~~l~s~~~~a~~~v~~k~~~~--~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (350)
|...++++.+..+++.++.|++.+ +++.++.+.++|+++++..+ + |......++.. . +.....| +...+.
T Consensus 164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~----~~~~~~~-~~~~~~ 237 (316)
T KOG1441|consen 164 GFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V----GFLTAPW-FVTFLI 237 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e----eeecccc-chhhHH
Confidence 999999999999999999999984 66889999999999997543 3 43333222211 0 0011223 333444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCC
Q 018843 235 AVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGA 312 (350)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~ 312 (350)
.++.. +++++.|...|++++++||++.++.+.+|.++.++.|+++|+++.|+.|..|+.+.++|+.+|++.|.++++
T Consensus 238 ~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 238 LLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 44444 999999999999999999999999999999999999999999999999999999999999999998887654
No 5
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.97 E-value=1.6e-30 Score=215.78 Aligned_cols=285 Identities=22% Similarity=0.389 Sum_probs=253.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHh
Q 018843 17 GLVVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTN 94 (350)
Q Consensus 17 ~~~~~~~~~s~~~~~~nK~~~~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (350)
..+..|+..|+.|++.||++++ +|++.+++.+.|.+.+.+.+.++.+.|..+.| .++.|+|+|.+++...+++..
T Consensus 9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIyt~ 85 (309)
T COG5070 9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIYTS 85 (309)
T ss_pred hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHHhc
Confidence 5789999999999999999997 78889999999999999988888777655433 567899999999999999999
Q ss_pred hhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc--------ccchHHHHHHHHH
Q 018843 95 TNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS--------GFTLTAYSWAFAY 166 (350)
Q Consensus 95 ~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~--------~~~~~G~~~~l~s 166 (350)
..+++|+++|.+++.|.++.+.++..+.+++++|+ +..+..+.++++........+|. ..+ .|++|+...
T Consensus 86 SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~v-tsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~N 163 (309)
T COG5070 86 SKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRV-TSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTN 163 (309)
T ss_pred ccceeeeeeeHHHHhccceeehhHhhHHHHhcCcc-chhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehh
Confidence 99999999999999999999999999999999997 77789999999999999888876 233 599999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHH
Q 018843 167 LVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLI 246 (350)
Q Consensus 167 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (350)
+++.+.+....|+..|-.+...++.++|+++++++++....+..+||....- .+..+....+.+..+|++++.+
T Consensus 164 clssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~------annl~~d~l~am~ISgl~svgi 237 (309)
T COG5070 164 CLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNL------ANNLSVDSLMAMFISGLCSVGI 237 (309)
T ss_pred hHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchh------hcCCChHHHHHHHHHHHHHhhh
Confidence 9999999999999888777788899999999999888888888888765421 1223556678899999999999
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCC
Q 018843 247 SFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGA 312 (350)
Q Consensus 247 ~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~ 312 (350)
+|+.-||++-+|+++.++++.+++....+-|.++||++.+-..+..+.+-.++..+|.+.+.++++
T Consensus 238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q 303 (309)
T COG5070 238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ 303 (309)
T ss_pred hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999988776443
No 6
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=2.4e-28 Score=224.52 Aligned_cols=282 Identities=25% Similarity=0.365 Sum_probs=236.2
Q ss_pred HHHHHHHHHHHHHHHHHHh-cC--CchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhh
Q 018843 20 VGYALCSSLLAVINKFAIT-KF--NYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTN 96 (350)
Q Consensus 20 ~~~~~~s~~~~~~nK~~~~-~~--~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (350)
..|..+.. ..++++.+.+ +. ++|.++++.|++...+.........+ .++.++..++++++.++++.++..+++.
T Consensus 7 ~i~~~~~~-~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (303)
T PF08449_consen 7 GIFGGCCS-YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNA 83 (303)
T ss_pred HHHHHHHH-HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHH
Confidence 33444333 3445555554 22 36999999999999888887665443 2233455688999999999999999999
Q ss_pred hhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcc----c------chHHHHHHHHH
Q 018843 97 LLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSG----F------TLTAYSWAFAY 166 (350)
Q Consensus 97 al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~----~------~~~G~~~~l~s 166 (350)
+++|+|.|+.+++|++.|+++++++.+++|||+ +++++.++++.++|+++...+|.. . +..|+++.+++
T Consensus 84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y-~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~s 162 (303)
T PF08449_consen 84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRY-SRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLS 162 (303)
T ss_pred HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccc-cHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHH
Confidence 999999999999999999999999999999997 899999999999999997655421 1 12399999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHH--hccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 018843 167 LVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFL--TGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGL 244 (350)
Q Consensus 167 ~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (350)
.+++++..+++|++.++++.+++++++|+++.++++..+.... .+|..+..++.. .++..+..++..++.+.
T Consensus 163 l~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~------~~p~~~~~l~~~s~~~~ 236 (303)
T PF08449_consen 163 LLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS------AHPSVLLYLLLFSLTGA 236 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH------HhHHHHHHHHHHHHHHH
Confidence 9999999999999999889999999999999988776666665 667776665543 25567788888888888
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCC
Q 018843 245 LISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPG 311 (350)
Q Consensus 245 ~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~ 311 (350)
..+...+.++++.||++.+++..+|++.++++|+++||+++++.||+|+++++.|..+|++.++|++
T Consensus 237 ~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 237 LGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 8888888999999999999999999999999999999999999999999999999999998888754
No 7
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=5.6e-28 Score=225.03 Aligned_cols=289 Identities=10% Similarity=0.042 Sum_probs=208.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcc--cCCCCChhhhhHHHHHHHH
Q 018843 9 TKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFL--HHDPFTFDTAKKFLPAAFV 86 (350)
Q Consensus 9 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 86 (350)
+|..-.-..++..... +.++..+.|..++.--.|..+.++|+.++.+++.++.+.+++ +.++.+++++..+...+++
T Consensus 9 ~~~~~~~~~~~~~q~~-~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~ 87 (358)
T PLN00411 9 RREAVFLTAMLATETS-VVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL 87 (358)
T ss_pred hhccchHHHHHHHHHH-HHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 3333333456666666 778888999999733238889999999998888876543322 2233345556666667766
Q ss_pred HHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHH------cccCCCchhhHHHHHHHHHhhhhhccc-Cc------
Q 018843 87 FYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAF------RRQPCPSRLTFLSLVIILGGAVGYVAT-DS------ 153 (350)
Q Consensus 87 ~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~------~~e~~~~~~~~~~~~l~~~G~~l~~~~-~~------ 153 (350)
......+.+.+++|++++.++++.+++|++++++++++ +|||. +++++.+++++++|+.+.... +.
T Consensus 88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~-~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~ 166 (358)
T PLN00411 88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERS-SVAKVMGTILSLIGALVVIFYHGPRVFVAS 166 (358)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccc-cHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 64344578999999999999999999999999999999 69995 999999999999999985421 11
Q ss_pred -----------------ccc-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHH-HHHHHHHHHHHhcc-H
Q 018843 154 -----------------GFT-LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLL-SLIISPFFWFLTGE-Y 213 (350)
Q Consensus 154 -----------------~~~-~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~ 213 (350)
..+ ..|+.+.++++++||+|.++.|+..++.+ +......++..+ +.++.++.....++ .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~~~~~~~ 245 (358)
T PLN00411 167 SPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLVVEKNNP 245 (358)
T ss_pred ccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 112 35999999999999999999999877532 222344455554 33333333332111 1
Q ss_pred HHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHH
Q 018843 214 GEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLIC 292 (350)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G 292 (350)
.... ..+ +.. ...+++.+++. ...|..+ +++++.+|...+++.+++|++++++|++++||++++.+++|
T Consensus 246 ~~~~-------~~~-~~~-~~~i~y~~i~t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG 315 (358)
T PLN00411 246 SVWI-------IHF-DIT-LITIVTMAIIT-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIG 315 (358)
T ss_pred ccce-------ecc-chH-HHHHHHHHHHH-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 1100 011 222 33466666654 4566555 99999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhcccccCC
Q 018843 293 LLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 293 ~~li~~g~~~~~~~~~~~ 310 (350)
+++++.|+++..+.++++
T Consensus 316 ~~LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 316 GILITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHHHHHHhhhhhh
Confidence 999999999988655444
No 8
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=7e-31 Score=224.23 Aligned_cols=298 Identities=20% Similarity=0.252 Sum_probs=262.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCchHHHHHHHHHHHHHHHHHHHHhCc-----ccCC--CCChhhhhH
Q 018843 11 QYYTTSGLVVGYALCSSLLAVINKFAIT----KFNYPGLLTALQYLTSALGVWVLGKFGF-----LHHD--PFTFDTAKK 79 (350)
Q Consensus 11 ~~~~~~~~~~~~~~~s~~~~~~nK~~~~----~~~~p~~l~~~r~~~~~~~l~~~~~~~~-----~~~~--~~~~~~~~~ 79 (350)
++..+...+..|..+|+++++.||++++ ..+.|.+++.+|++.+..++..+.+.-. .+.+ +++.+..++
T Consensus 25 n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~ 104 (347)
T KOG1442|consen 25 NAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQ 104 (347)
T ss_pred hhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHh
Confidence 3455666778889999999999999997 4567999999999999999888755211 1122 255677999
Q ss_pred HHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC---cccc
Q 018843 80 FLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD---SGFT 156 (350)
Q Consensus 80 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~---~~~~ 156 (350)
++|+++.+..++.+++.+++|++++.+.+=|+++.+|+.++.++++|+| .+.....++.+++.|..+...+| ...+
T Consensus 105 vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqk-Ts~~~~~~C~lIi~GF~lGvdqE~~~~~ls 183 (347)
T KOG1442|consen 105 VLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQK-TSFFALGCCLLIILGFGLGVDQEGSTGTLS 183 (347)
T ss_pred hcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccc-cccccceeehhheehheeccccccccCccc
Confidence 9999999999999999999999999999999999999999999999999 58888888899999999988776 4567
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843 157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAV 236 (350)
Q Consensus 157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
+.|.++++.++++-|+..+++|+...+.+...|...+|+++.+++++.+...++||......+ ++.....+|..+
T Consensus 184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~-----~~l~a~~Fw~~m 258 (347)
T KOG1442|consen 184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGF-----PHLPAIKFWILM 258 (347)
T ss_pred hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCc-----ccchHHHHHHHH
Confidence 899999999999999999999999988888999999999999988888888889999888654 333467899999
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCCCC
Q 018843 237 ALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAAP 314 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~~~ 314 (350)
.++|++++.++|...+-+|-+||.++.+.+.-|....+++++.+++|+.+..-|-|-++++.|...|.+.|.+++++.
T Consensus 259 tLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~ 336 (347)
T KOG1442|consen 259 TLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKA 336 (347)
T ss_pred HHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887765544
No 9
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.96 E-value=6e-27 Score=203.50 Aligned_cols=292 Identities=16% Similarity=0.202 Sum_probs=239.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCccc----CCCCChhh-hhHHHHHHHH
Q 018843 12 YYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLH----HDPFTFDT-AKKFLPAAFV 86 (350)
Q Consensus 12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~ 86 (350)
+......+..|+++|+++.+.+|+.-.+|++|.+++..|+++-.+.....++..+.+ +..+++++ .|+..|.++.
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala 93 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA 93 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence 344556668888889999999999988999999999999999988888766643322 23566654 6667799999
Q ss_pred HHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHH
Q 018843 87 FYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAY 166 (350)
Q Consensus 87 ~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s 166 (350)
...++.+.|++++|++.+.+++.|++.++|+.+++.++.-||. ++.-.+.+.++.+|+.+....+.+++..|..+...+
T Consensus 94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~-~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~a 172 (349)
T KOG1443|consen 94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKF-RWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAA 172 (349)
T ss_pred hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHH-HHHHHHHHHHHhhheeEEEecccceeehhHHHHHHH
Confidence 9999999999999999999999999999999999999999995 888889999999999999999889999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCC---CCcchhHHHHhHH-HHHHHHHHHHHhccHHHHH-HHHHHhcCCCCchhHHHHHHHHHH
Q 018843 167 LVTITTEMVYIKHMVTNLG---LNTWGFVLYNNLL-SLIISPFFWFLTGEYGEVF-AALVASAGSWFVPDVFFAVALSCV 241 (350)
Q Consensus 167 ~~~~a~~~v~~k~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 241 (350)
+++.+++..+++.++++.+ .+|.+++++..+. ++.++|....+-|...... +..+...+. ........+...|.
T Consensus 173 S~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~-~~~rv~g~i~l~g~ 251 (349)
T KOG1443|consen 173 SLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTG-LILRVIGLISLGGL 251 (349)
T ss_pred HHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCcc-HHHHHHHHHHHHHH
Confidence 9999999999999998653 5788888877766 5667777766533222211 111111111 11223455666777
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 242 FGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 242 ~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
.+++..++.+..+.+++..+.++.+..|.+.+.+++.++.++.++..+|.|..+...|+..+..
T Consensus 252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 8888888889999999999999999999999999999999999999999999999999999843
No 10
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.95 E-value=1.8e-25 Score=204.68 Aligned_cols=269 Identities=14% Similarity=0.084 Sum_probs=191.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHH
Q 018843 12 YYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAI 91 (350)
Q Consensus 12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (350)
.......+..|.. + ....|...++++ |..+.+.|+..+.+++.+... . ++.+++.++..+..++......
T Consensus 6 ~l~~l~a~~~Wg~-~---~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~ 75 (295)
T PRK11689 6 TLIGLIAILLWST-M---VGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTVG--F---PRLRQFPKRYLLAGGLLFVSYE 75 (295)
T ss_pred hHHHHHHHHHHHH-H---HHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHcc--c---cccccccHHHHHHHhHHHHHHH
Confidence 3334445555554 2 345699888887 999999999999888776531 1 1222222334444344344445
Q ss_pred HHhhhhhh----ccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc-----------ccc
Q 018843 92 FTNTNLLR----HANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS-----------GFT 156 (350)
Q Consensus 92 ~~~~~al~----~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~-----------~~~ 156 (350)
.+.+.+++ +.++..+.++.++.|+++.+++++++||| ++++++.+++++++|++++..++. ..+
T Consensus 76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~-~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 154 (295)
T PRK11689 76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQK-ANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASN 154 (295)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCC-ccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccC
Confidence 55666664 46778889999999999999999999999 599999999999999998764432 123
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843 157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAV 236 (350)
Q Consensus 157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
..|+.++++++++||+|.++.||..++ .++... +....+..+.+.. ...++.. .. .+...|..+
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~~--~~~~~~~~l~~~~-~~~~~~~----------~~-~~~~~~~~l 218 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARG--KNGITL--FFILTALALWIKY-FLSPQPA----------MV-FSLPAIIKL 218 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCC--CCchhH--HHHHHHHHHHHHH-HHhcCcc----------cc-CCHHHHHHH
Confidence 469999999999999999999998653 344332 2222222222222 2222111 01 144556666
Q ss_pred HHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843 237 ALSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVT 308 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~ 308 (350)
++.++ ...+.|..+ +++|+.+|...+...+++|+++++++++++||++++.+++|+++++.|+++....++
T Consensus 219 ~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 219 LLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 67775 456666555 999999999999999999999999999999999999999999999999988765544
No 11
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=5.8e-25 Score=201.10 Aligned_cols=261 Identities=13% Similarity=0.061 Sum_probs=201.8
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHH-HHHHHhhhhh-hccchhHH
Q 018843 29 LAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFY-LAIFTNTNLL-RHANVDTF 106 (350)
Q Consensus 29 ~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al-~~~s~s~~ 106 (350)
.....|...++.+ |..++++|++++.+++.+..+.++++. .+++++++....+.+.. ....+.+.+. ++++++.+
T Consensus 23 ~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a 99 (292)
T PRK11272 23 TYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHPL--PTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIA 99 (292)
T ss_pred HHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence 4567798887776 999999999999888877655443322 24556777667776653 4456677787 99999999
Q ss_pred HHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc-CcccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 018843 107 IVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT-DSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLG 185 (350)
Q Consensus 107 ~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~ 185 (350)
+++.++.|+++++++.+ +||| ++++++.+++++++|+.+...+ +.+.+..|+.++++++++||++.+..||..++
T Consensus 100 ~~l~~~~Pl~~~lla~~-~~e~-~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-- 175 (292)
T PRK11272 100 AVVVATVPLFTLCFSRL-FGIR-TRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRLPLP-- 175 (292)
T ss_pred HHHHHHHHHHHHHHHHH-hccc-CchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhcCCC--
Confidence 99999999999999986 6999 5999999999999999987543 33445679999999999999999999987542
Q ss_pred CCcchhHHHHhHHHH-HHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHH
Q 018843 186 LNTWGFVLYNNLLSL-IISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFT 263 (350)
Q Consensus 186 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s 263 (350)
++.....++...+. ++.+... ..++... ...+...|..+.+.+++++...|..+ +++|+.++.+.+
T Consensus 176 -~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s 243 (292)
T PRK11272 176 -VGMMAGAAEMLAAGVVLLIASL-LSGERLT----------ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALAT 243 (292)
T ss_pred -cchHHHHHHHHHHHHHHHHHHH-HcCCccc----------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH
Confidence 22334455655543 3333322 2221110 11144567888888999888888776 899999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843 264 VTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVT 308 (350)
Q Consensus 264 ~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~ 308 (350)
+..+++|+.+.+++++++||++|+.+++|+++++.|+++.++.++
T Consensus 244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998876544
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.95 E-value=8e-25 Score=200.87 Aligned_cols=274 Identities=8% Similarity=0.085 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHH-HHHH
Q 018843 15 TSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYL-AIFT 93 (350)
Q Consensus 15 ~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 93 (350)
..+.++.|... ....|..+++.+ |..+.++|+.++.+.+.+..+ ++ + +.++.++..+++... ...+
T Consensus 9 ~l~~~~~Wg~~----~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~---~---~~~~~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 9 ALLVVVVWGLN----FVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RP---K---VPLNLLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHhhh----HHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CC---C---CchHHHHHHHHHHHHHHHHH
Confidence 33444455443 344598888777 999999999887665544332 11 1 123345555554333 3345
Q ss_pred hhhhhhc-cchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC---cccchHHHHHHHHHHHH
Q 018843 94 NTNLLRH-ANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD---SGFTLTAYSWAFAYLVT 169 (350)
Q Consensus 94 ~~~al~~-~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~---~~~~~~G~~~~l~s~~~ 169 (350)
.+.+++| .+++.+.++.++.|+++.+++++++||| ++++++.+++++++|+.+...++ .+.+..|+.++++++++
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~-~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~ 154 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGER-LQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFS 154 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCc-CcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHH
Confidence 6778887 6889999999999999999999999999 59999999999999999876432 22345799999999999
Q ss_pred HHHHHHHHHHHhhcCC-CCcchhHHHHhHHHHH-HHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 018843 170 ITTEMVYIKHMVTNLG-LNTWGFVLYNNLLSLI-ISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLIS 247 (350)
Q Consensus 170 ~a~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (350)
++.|.++.|+..++.+ ........++...+.+ +....... ++....... ... .+...|..+++.+++++++.
T Consensus 155 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~-~~~~~~~~l~~l~i~~t~~~ 228 (299)
T PRK11453 155 WACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLIL-DGSATMIHS----LVT-IDMTTILSLMYLAFVATIVG 228 (299)
T ss_pred HHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHh-cCchhhhhh----hcc-CCHHHHHHHHHHHHHHHHHH
Confidence 9999999999765322 1222233334433221 22221122 111111000 011 24567899999999999999
Q ss_pred HHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843 248 FFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVT 308 (350)
Q Consensus 248 ~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~ 308 (350)
|..+ +++++.++.+.+...+++|++++++|++++||++++.+++|++++++|+++..+.++
T Consensus 229 ~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 229 YGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 9887 899999999999999999999999999999999999999999999999998766554
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=8.9e-25 Score=199.93 Aligned_cols=255 Identities=13% Similarity=0.031 Sum_probs=194.0
Q ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHH
Q 018843 28 LLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFI 107 (350)
Q Consensus 28 ~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~ 107 (350)
......|+.+++++ |..+.++|+.++.+++.+..+.++ ++.++++++..+..+++......+.+.+++|+|++.++
T Consensus 26 ~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~ 101 (293)
T PRK10532 26 SGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAV 101 (293)
T ss_pred hhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 44557899998877 888999999999888877653221 13456677777788887777777888999999999999
Q ss_pred HHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc---CcccchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 018843 108 VFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT---DSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNL 184 (350)
Q Consensus 108 il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~---~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~ 184 (350)
++.++.|+++.+++ +|| +.+ +..+.++++|+.++... +.+.+..|++++++++++|+.|.+..|+..++
T Consensus 102 ~l~~t~Pi~~~ll~----~~~-~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~- 173 (293)
T PRK10532 102 ALEFTGPLAVALFS----SRR-PVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRAGAE- 173 (293)
T ss_pred HHHHHHHHHHHHHh----cCC-hHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 99999999999886 355 444 34566778998876422 22345679999999999999999999998764
Q ss_pred CCCcchhHHHHhHH-HHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHH
Q 018843 185 GLNTWGFVLYNNLL-SLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAF 262 (350)
Q Consensus 185 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~ 262 (350)
.++... .+.... ++++.+.... .++ . .. .+...|...++.++++++++|..+ +++++.+|...
T Consensus 174 -~~~~~~-~~~~~~~~~~l~~~~~~-~~~-~----------~~-~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~a 238 (293)
T PRK10532 174 -HGPATV-AIGSLIAALIFVPIGAL-QAG-E----------AL-WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTF 238 (293)
T ss_pred -CCchHH-HHHHHHHHHHHHHHHHH-ccC-c----------cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHH
Confidence 344444 344444 3334443322 111 0 01 133455666789999999999776 99999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843 263 TVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 263 s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
+++.+++|++++++|++++||++++.+++|.+++++|.+.+.+..++
T Consensus 239 s~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 239 GTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999998765433
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.94 E-value=2.1e-24 Score=194.16 Aligned_cols=252 Identities=15% Similarity=0.126 Sum_probs=196.2
Q ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHH-HHHHHHHhhhhhhccchhHHHHH
Q 018843 31 VINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFV-FYLAIFTNTNLLRHANVDTFIVF 109 (350)
Q Consensus 31 ~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~s~s~~~il 109 (350)
+..|+.+++...|..+.++|++.+.+++.+..+.+ .++++++..+..+.+ ......+.+.+++|++++..+++
T Consensus 6 ~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii 79 (260)
T TIGR00950 6 VVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALL 79 (260)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHH
Confidence 45698887655588899999999988877765443 134445555566555 45556788999999999999999
Q ss_pred HhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC-cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 018843 110 RSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD-SGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNT 188 (350)
Q Consensus 110 ~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~ 188 (350)
.++.|+++++++.+++|||. +++++.++.++++|+.+...++ .+.+..|+.++++++++++.+.++.|+..++.+.++
T Consensus 80 ~~~~P~~~~~~~~l~~~e~~-~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~ 158 (260)
T TIGR00950 80 LYLAPLYVTLLSDLMGKERP-RKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPEL 158 (260)
T ss_pred HhhhHHHHHHHHHHHccCCC-cHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchH
Confidence 99999999999999999995 9999999999999999875433 345568999999999999999999999887544444
Q ss_pred chhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHH
Q 018843 189 WGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFTVTGV 267 (350)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~ 267 (350)
.....+....+.+++.+.....++.. .. +...|..+++.++++....|..+ +++++.++.+.+...+
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~ 226 (260)
T TIGR00950 159 LQFTGWVLLLGALLLLPFAWFLGPNP-----------QA-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL 226 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCC-----------Cc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 33333445554433333322222211 11 33456778888888888777766 8999999999999999
Q ss_pred HHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhh
Q 018843 268 VNKFLTVVINVLIWDKHASPFGLICLLVTIAGGV 301 (350)
Q Consensus 268 l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~ 301 (350)
++|+++.+++++++||++++.+++|..+++.|++
T Consensus 227 ~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 227 AEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999863
No 15
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.94 E-value=2.4e-24 Score=196.69 Aligned_cols=271 Identities=15% Similarity=0.142 Sum_probs=197.8
Q ss_pred HHHHHHHHHh-cCCchHHHHHHHHHHHHHHHHHHHHhCcc--cCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhH
Q 018843 29 LAVINKFAIT-KFNYPGLLTALQYLTSALGVWVLGKFGFL--HHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDT 105 (350)
Q Consensus 29 ~~~~nK~~~~-~~~~p~~l~~~r~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~ 105 (350)
....+..+-+ +.+.|.+-+++-.+.-.++.......|+. +..+.-++++.+.+.++++.....++.+.|++|++++.
T Consensus 28 t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS 107 (334)
T PF06027_consen 28 TGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTS 107 (334)
T ss_pred HHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhH
Confidence 3344454444 56778875555554444444333333221 11222345677778889999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc---------ccchHHHHHHHHHHHHHHHHHHH
Q 018843 106 FIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS---------GFTLTAYSWAFAYLVTITTEMVY 176 (350)
Q Consensus 106 ~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~v~ 176 (350)
++++.++..+++++++++++|+|+ ++.++.|++++++|++++...|. +....|++++++++++||+++++
T Consensus 108 ~~lL~~~~i~~~~~LS~~fL~~ry-~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~ 186 (334)
T PF06027_consen 108 VQLLDCTSIPFVMILSFIFLKRRY-SWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVL 186 (334)
T ss_pred HHhhhhhhhHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 99999999999999998765442 23358999999999999999999
Q ss_pred HHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhh
Q 018843 177 IKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARK 255 (350)
Q Consensus 177 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~ 255 (350)
.|+..|+. +..+......+.+.++..+.... -|..+..+. +| +...+..++.. .++....|... ..++
T Consensus 187 ~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~i-le~~~i~~~------~w-~~~~~~~~v~~-~~~lf~~y~l~p~~l~ 255 (334)
T PF06027_consen 187 EEKLVKKA--PRVEFLGMLGLFGFIISGIQLAI-LERSGIESI------HW-TSQVIGLLVGY-ALCLFLFYSLVPIVLR 255 (334)
T ss_pred HHHhcccC--CHHHHHHHHHHHHHHHHHHHHHh-eehhhhhcc------CC-ChhhHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 99999854 45555555555544433333222 255544332 34 23333333333 33444455555 7899
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCC
Q 018843 256 AISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPG 311 (350)
Q Consensus 256 ~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~ 311 (350)
..||+...+.....++.+++++++++|++++|..++|.++++.|.++|+..+.+.+
T Consensus 256 ~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~ 311 (334)
T PF06027_consen 256 MSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEE 311 (334)
T ss_pred hCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccc
Confidence 99999999999999999999999999999999999999999999999997766543
No 16
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.94 E-value=2e-24 Score=197.96 Aligned_cols=259 Identities=8% Similarity=-0.001 Sum_probs=176.3
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCccc-C--CCC-ChhhhhHHHHHHHHHHHHHHHhhhhhhccchhH
Q 018843 30 AVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLH-H--DPF-TFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDT 105 (350)
Q Consensus 30 ~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~ 105 (350)
....|.. .+.+ |..+.++|++++.+++.+....++++ . ++. +++++......++.......+++++++++|++.
T Consensus 24 ~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 101 (296)
T PRK15430 24 PAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLE 101 (296)
T ss_pred HHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 3445875 4566 88999999999987666554332211 0 011 122222222333445556788999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 018843 106 FIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLG 185 (350)
Q Consensus 106 ~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~ 185 (350)
++++.++.|+++++++++++|||. +++++.+++++++|++++..++.+. ..++++++++||+|.++.|+..++..
T Consensus 102 a~~l~~~~Pi~v~l~~~~~l~E~~-~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~ 176 (296)
T PRK15430 102 ASLGYFINPLVNIVLGMIFLGERF-RRMQWLAVILAICGVLVQLWTFGSL----PIIALGLAFSFAFYGLVRKKIAVEAQ 176 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC-cHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999999995 9999999999999999876433222 14688899999999999988654221
Q ss_pred CCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchh-HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 018843 186 LNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPD-VFFAVALSCVFGLLISFFGFAARKAISATAFTV 264 (350)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~ 264 (350)
.+......+....+.+. ......+.... .. .++. .+..+...++.+....++.++++++.+|.+.++
T Consensus 177 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------~~-~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~ 244 (296)
T PRK15430 177 TGMLIETMWLLPVAAIY---LFAIADSSTSH--------MG-QNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGF 244 (296)
T ss_pred hhHHHHHHHHHHHHHHH---HHHHccCCccc--------cc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 12222222223232211 11111110000 00 1222 234444455554444444459999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccc
Q 018843 265 TGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV 307 (350)
Q Consensus 265 ~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~ 307 (350)
+.+++|++++++|++++||++++.+++|+++++.|+.+.....
T Consensus 245 ~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 245 FQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988888766543
No 17
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.2e-23 Score=173.82 Aligned_cols=258 Identities=16% Similarity=0.174 Sum_probs=221.9
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHH
Q 018843 39 KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVA 118 (350)
Q Consensus 39 ~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ 118 (350)
.|.+...+.++|+.+..+..-++...+ +..+.++..-+....+++-+.+.+.-.|.++||+|.|+..+-|++.|+.++
T Consensus 49 ~FTfalaLVf~qC~~N~vfAkvl~~ir--~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVM 126 (337)
T KOG1580|consen 49 KFTFALALVFFQCTANTVFAKVLFLIR--KKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM 126 (337)
T ss_pred eehHHHHHHHHHHHHHHHHHHhheeec--ccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence 366777899999999988876655443 323445555667778888899999999999999999999999999999999
Q ss_pred HHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc-------ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchh
Q 018843 119 LADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS-------GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGF 191 (350)
Q Consensus 119 ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~ 191 (350)
++++++.||++ +++++..+++++.|+++.-+.+. .....|-++.+.|.-..++....++|+...+..+.-.+
T Consensus 127 ilGVl~~~KsY-~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~M 205 (337)
T KOG1580|consen 127 ILGVLFAHKSY-HWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSM 205 (337)
T ss_pred eeehhhhcccc-cHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhh
Confidence 99999999998 79999999999999999765422 12237999999999999999999999877666667779
Q ss_pred HHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 018843 192 VLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKF 271 (350)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v 271 (350)
|.|+++.+.+.+....+++||..+...+.. .+|..|+.+...++.+...+++.|.-+...+|.+-|++...+..
T Consensus 206 M~~~NlwStL~Lg~g~lfTGElweF~yF~~------RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKf 279 (337)
T KOG1580|consen 206 MFYTNLWSTLYLGAGLLFTGELWEFFYFVQ------RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKF 279 (337)
T ss_pred HHHHHHHHHHHhhhhheehhhHHHHHHHHH------hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHH
Confidence 999999999999888889999877765532 37788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 272 LTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 272 ~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
++++.|+++|+++++..||+|.++++.|...-..
T Consensus 280 FTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 280 FTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 9999999999999999999999999999876543
No 18
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.90 E-value=9.1e-22 Score=171.54 Aligned_cols=262 Identities=16% Similarity=0.162 Sum_probs=225.8
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHH
Q 018843 39 KFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVA 118 (350)
Q Consensus 39 ~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ 118 (350)
+|..|.++.+.|-+.+.+.-..+...++.+ .-.++.+.+....++......++++.|++|+|.|+.++.|++.-+.|+
T Consensus 47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~--~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm 124 (327)
T KOG1581|consen 47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKE--LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM 124 (327)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccccc--CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence 467799999999999988887766554333 223557888888999999999999999999999999999999999999
Q ss_pred HHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc---------ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 018843 119 LADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS---------GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189 (350)
Q Consensus 119 ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~ 189 (350)
+.+.++.|+|+ +..+++..++..+|+.+....+. ..++.|+.++..+.+++++.+..++++.++.+.+++
T Consensus 125 lmg~Lvy~~ky-~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~ 203 (327)
T KOG1581|consen 125 LMGTLVYGRKY-SSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSL 203 (327)
T ss_pred HHHHHHhcCcc-CcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHh
Confidence 99999999998 78889999999999998654321 245789999999999999999999999999999999
Q ss_pred hhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 018843 190 GFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVN 269 (350)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~ 269 (350)
++|++.++.+++......+..+.+.+..++.. .++.++..++..+.++.+.+.+.++-+++.++.+.+.++..|
T Consensus 204 ~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~------~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttR 277 (327)
T KOG1581|consen 204 HMMFGVNLFSAILNGTYLILQGHLLPAVSFIK------EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTR 277 (327)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH------cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHH
Confidence 99999999987766666655555555544432 277889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843 270 KFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 270 ~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
..++++++.+.+|+++++.||.|..+++.|..+-.+.+.+
T Consensus 278 k~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 278 KMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999999999999999999886666555
No 19
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.88 E-value=1.7e-20 Score=170.76 Aligned_cols=260 Identities=15% Similarity=0.108 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhC--cccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccch
Q 018843 26 SSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFG--FLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANV 103 (350)
Q Consensus 26 s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~ 103 (350)
.......+|...++ ..+ ...++.....+++.+....+ ..+.++.+++.+......+........+.+.++++.|+
T Consensus 13 ~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 89 (281)
T TIGR03340 13 HAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADV 89 (281)
T ss_pred HHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 44555667755544 223 24555556665665544432 11122222333333344444556667788999999999
Q ss_pred hHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC-cccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 018843 104 DTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD-SGFTLTAYSWAFAYLVTITTEMVYIKHMVT 182 (350)
Q Consensus 104 s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~ 182 (350)
+..+.+.++.|+++.+++++++||| ++++++.++.++++|+.+...++ ...+..|+.++++++++++.|.++.|+..+
T Consensus 90 ~~~~~l~~~~p~~~~l~~~~~~~e~-~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~ 168 (281)
T TIGR03340 90 GLVYPLARSSPLLVAIWATLTLGET-LSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAAL 168 (281)
T ss_pred hhhhhHHhhhHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcccccc
Confidence 9999999999999999999999999 59999999999999999875433 234457888999999999999999887643
Q ss_pred cCCCCcc-hhHHHHhHHHHHH-HHHHHHH--hccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhcc
Q 018843 183 NLGLNTW-GFVLYNNLLSLII-SPFFWFL--TGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAI 257 (350)
Q Consensus 183 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~ 257 (350)
+. ++. ....+........ .|..... .++.. .. .....+....+.+.+.....|..+ +++++.
T Consensus 169 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~ 235 (281)
T TIGR03340 169 GV--PAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS-MF----------PYARQILPSATLGGLMIGGAYALVLWAMTRL 235 (281)
T ss_pred ch--hcccccHHHHHHHHHHHHHHHHHHHHHHhccc-hh----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 22 221 1222222111111 1222111 11110 00 011233455556666666666555 999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhh
Q 018843 258 SATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVL 302 (350)
Q Consensus 258 sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~ 302 (350)
++...+...+++|++++++|++++||++++.+++|++++++|+.+
T Consensus 236 ~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 236 PVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred CceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 999999999999999999999999999999999999999999875
No 20
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.85 E-value=5.5e-18 Score=154.38 Aligned_cols=259 Identities=17% Similarity=0.206 Sum_probs=182.9
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHH-HHHHHHHHHHHhhhhhhccchhHHHH
Q 018843 30 AVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLP-AAFVFYLAIFTNTNLLRHANVDTFIV 108 (350)
Q Consensus 30 ~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~al~~~s~s~~~i 108 (350)
....|...++...+....+.|.....+........+..+.++ .++.++..+. ..+.......+++.++++++++.++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (292)
T COG0697 23 FIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRP-ALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASL 101 (292)
T ss_pred HHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccc-cccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH
Confidence 334454454422244466668888877744333322111111 1111233343 44445555778899999999999999
Q ss_pred HHhHHHHHHHHHHH-HHcccCCCchhhHHHHHHHHHhhhhhcccCcccc---hHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 018843 109 FRSLTPLLVALADT-AFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFT---LTAYSWAFAYLVTITTEMVYIKHMVTNL 184 (350)
Q Consensus 109 l~~~~pi~v~ll~~-l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~---~~G~~~~l~s~~~~a~~~v~~k~~~~~~ 184 (350)
+.++.|+++.+++. +++|||. +++++.++++.+.|+.++..++...+ ..|+.+++.++++++++.++.|+.. +
T Consensus 102 l~~~~p~~~~~~~~~~~~~e~~-~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~- 178 (292)
T COG0697 102 IIGLLPLFTALLAVLLLLGERL-SLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R- 178 (292)
T ss_pred HHHHHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-
Confidence 99999999999997 7779995 99999999999999999887655433 5899999999999999999999886 2
Q ss_pred CCCcchhHH-HHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHH
Q 018843 185 GLNTWGFVL-YNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAF 262 (350)
Q Consensus 185 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~ 262 (350)
.++..... +... ...+....... .+.. . ......|....+.++++....+..+ +++++.++...
T Consensus 179 -~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~--~---------~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 244 (292)
T COG0697 179 -LGPVTLALLLQLL-LALLLLLLFFL-SGFG--A---------PILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLV 244 (292)
T ss_pred -CChHHHHHHHHHH-HHHHHHHHHHh-cccc--c---------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH
Confidence 23333333 2222 11111111111 1111 0 0133567788888888887555554 89999999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843 263 TVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 263 s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~ 306 (350)
+...+++|+.+.+++++++||+++..+++|+.+++.|+.+...+
T Consensus 245 ~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 245 ALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999998766
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.84 E-value=3.7e-18 Score=153.29 Aligned_cols=231 Identities=10% Similarity=0.135 Sum_probs=155.2
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH-hCccc-----CCCCChhh-hhHHHHHHHHHHHHHHHhhhhhhcc
Q 018843 29 LAVINKFAITKFNYPGLLTALQYLTSALGVWVLGK-FGFLH-----HDPFTFDT-AKKFLPAAFVFYLAIFTNTNLLRHA 101 (350)
Q Consensus 29 ~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~-~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~al~~~ 101 (350)
.....|. ..+.+ |..+.++|++++.+++.+... .++++ .++.++++ +......+++......+++.+++++
T Consensus 17 ~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~ 94 (256)
T TIGR00688 17 MYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNG 94 (256)
T ss_pred HHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3455697 44565 899999999998877665432 22211 11111221 2234455666667788899999999
Q ss_pred chhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 018843 102 NVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITTEMVYIKHMV 181 (350)
Q Consensus 102 s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~k~~~ 181 (350)
++++++++.++.|+++++++++++|||+ +++++.+++++++|++++..++.+.. .++++++++++.|.+..|+..
T Consensus 95 ~~~~a~~l~~~~Pi~~~lla~~~l~Ek~-~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~~~ 169 (256)
T TIGR00688 95 SSLEVSLGYLINPLVMVALGRVFLKERI-SRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKALK 169 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999995 99999999999999998754332222 357889999999999998865
Q ss_pred hcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchh
Q 018843 182 TNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISAT 260 (350)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~ 260 (350)
++ + ..+... ..+...+......... ++... +.+.....|..++..++++ .+.|..+ .++|+.+|.
T Consensus 170 ~~-~--~~~~~~-~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~l~~~g~~t-~i~~~l~~~a~~~~~a~ 235 (256)
T TIGR00688 170 NT-D--LAGFCL-ETLSLMPVAIYYLLQT-DFATV--------QQTNPFPIWLLLVLAGLIT-GTPLLAFVIAANRLPLN 235 (256)
T ss_pred CC-C--cchHHH-HHHHHHHHHHHHHHHh-ccCcc--------cccCchhHHHHHHHHHHHH-HHHHHHHHHHHHcCChH
Confidence 42 2 222211 1111111111111111 11100 0011112567777777774 4555554 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHc
Q 018843 261 AFTVTGVVNKFLTVVINVLI 280 (350)
Q Consensus 261 ~~s~~~~l~~v~~~~ls~~~ 280 (350)
+.+++.+++|+++++++++.
T Consensus 236 ~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 236 LLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999764
No 22
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.84 E-value=6.8e-18 Score=143.61 Aligned_cols=252 Identities=13% Similarity=0.041 Sum_probs=196.9
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhH
Q 018843 33 NKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSL 112 (350)
Q Consensus 33 nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~ 112 (350)
.|.++...+ |.-.+..|..++.+++..+++-.+ +++++++++.++..|....+++.++|.+++.+|.+++..+.++
T Consensus 31 Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~ 106 (292)
T COG5006 31 AKSLFPLVG-AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFT 106 (292)
T ss_pred HHHHccccC-hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhc
Confidence 366665555 777999999999888888765221 3567788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC---cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Q 018843 113 TPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD---SGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTW 189 (350)
Q Consensus 113 ~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~ 189 (350)
.|+.+.+++ .| +.++..-+.+.+.|..+..... ...|+.|..+.+++..||+.|++..||.-+. .+.-
T Consensus 107 GPL~vA~~~-----sR--r~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g~ 177 (292)
T COG5006 107 GPLAVALLS-----SR--RLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA--EHGT 177 (292)
T ss_pred cHHHHHHHh-----cc--chhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCCc
Confidence 999988763 22 2445666777888888765332 3567899999999999999999999998762 2333
Q ss_pred hhHHHHhHH-HHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHH
Q 018843 190 GFVLYNNLL-SLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFTVTGV 267 (350)
Q Consensus 190 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~ 267 (350)
+.+.+-+.+ +.+.+|+..-..+ + ...++.....-+..++++.++.|..= .++++.++.+.++...
T Consensus 178 ~g~a~gm~vAaviv~Pig~~~ag--~-----------~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlS 244 (292)
T COG5006 178 AGVAVGMLVAALIVLPIGAAQAG--P-----------ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLS 244 (292)
T ss_pred hHHHHHHHHHHHHHhhhhhhhcc--h-----------hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHH
Confidence 334445555 3444455432211 1 12266677788888999999999875 8999999999999999
Q ss_pred HHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843 268 VNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 268 l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
++|.++.+.|++++||++|+.||+|++.++.++.-..+..+|+
T Consensus 245 LePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~ 287 (292)
T COG5006 245 LEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP 287 (292)
T ss_pred hhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence 9999999999999999999999999999999998776655544
No 23
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.82 E-value=2.8e-18 Score=147.07 Aligned_cols=294 Identities=15% Similarity=0.097 Sum_probs=228.3
Q ss_pred cCCcchHHH-HHHHHHHHHHHHHHHHHHHHHHh--cC-CchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHH
Q 018843 7 DSTKQYYTT-SGLVVGYALCSSLLAVINKFAIT--KF-NYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLP 82 (350)
Q Consensus 7 ~~~~~~~~~-~~~~~~~~~~s~~~~~~nK~~~~--~~-~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 82 (350)
.++|+.|.= .+.....++.......+..++++ +| |+.+.+++.|++.-..+-.+-... . +++-....||....
T Consensus 35 ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~--~-~~k~r~iP~rtY~~ 111 (367)
T KOG1582|consen 35 LSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL--I-QTKRRVIPWRTYVI 111 (367)
T ss_pred cccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe--e-cccceecchhHhhh
Confidence 345554332 23333444446666777787776 55 478899999987764443332211 1 11111235788999
Q ss_pred HHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc----ccchH
Q 018843 83 AAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS----GFTLT 158 (350)
Q Consensus 83 ~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~----~~~~~ 158 (350)
++.+..+.+.+.+.++.|++.|+-.+.|++..+.+++.+.++-++|+ ...++.+..++.+|.++....|. +++..
T Consensus 112 la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY-~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~ 190 (367)
T KOG1582|consen 112 LAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRY-GVHDYIAAMLMSLGLIWFTLADSQTSPNFNLI 190 (367)
T ss_pred hHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccc-cHHHHHHHHHHHHHHHhhhhcccccCCCccee
Confidence 99999999999999999999999999999999999999999999998 79999999999999999876654 67789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHH
Q 018843 159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVAL 238 (350)
Q Consensus 159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
|+.++-++.++.|+-..++++.++..+-+..++.+|...++.+.+......+||..+.+.+-. ++ +.......++
T Consensus 191 Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fca----eh-p~~tyGy~~~ 265 (367)
T KOG1582|consen 191 GVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCA----EH-PVRTYGYAFL 265 (367)
T ss_pred eHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHH----hC-cHhHHHHHHH
Confidence 999999999999999999999998777788899999988888777777778888877765422 11 2224444444
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843 239 SCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
.+..+....-.....++-.+|.+.+.++..++.+++++|+++|..++|....-|..+++.|+++-.+.++.
T Consensus 266 ~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 266 FSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 44555555555556789999999999999999999999999999999999999999999999987777643
No 24
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.79 E-value=2.2e-16 Score=141.78 Aligned_cols=278 Identities=17% Similarity=0.159 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHHHHHh--cCCc-hHHHHHHHHHHHHHHHHHHHHhCc-----ccCCCC------ChhhhhHHHHHHHHHH
Q 018843 23 ALCSSLLAVINKFAIT--KFNY-PGLLTALQYLTSALGVWVLGKFGF-----LHHDPF------TFDTAKKFLPAAFVFY 88 (350)
Q Consensus 23 ~~~s~~~~~~nK~~~~--~~~~-p~~l~~~r~~~~~~~l~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~~ 88 (350)
-+.+..+..+.|+.-. +.+| |.+..+.-=++-.+++....+.+. +..+.+ ++++..++...++++.
T Consensus 24 t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYa 103 (345)
T KOG2234|consen 24 TAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYA 103 (345)
T ss_pred HHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHH
Confidence 3335566677777654 2233 566555544555555555444332 111222 2345667778888998
Q ss_pred HHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC-----------cccch
Q 018843 89 LAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD-----------SGFTL 157 (350)
Q Consensus 89 ~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~-----------~~~~~ 157 (350)
....+.+.++.+.+++++++..++..+.++++..++++||. ++.+|.++++.++|+.+++.+. ....+
T Consensus 104 lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkL-s~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~ 182 (345)
T KOG2234|consen 104 LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKL-SRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPF 182 (345)
T ss_pred HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchh
Confidence 88878999999999999999999999999999999999996 9999999999999999987221 12235
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843 158 TAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA 237 (350)
Q Consensus 158 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
.|....+.++++.++..++.++++|+.+.+.|-+..-...+++++..+.... .|..... + ...+.+| +...|..++
T Consensus 183 ~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~-~d~~~i~-~-~gff~G~-s~~vw~vVl 258 (345)
T KOG2234|consen 183 LGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILL-QDGEAIN-E-YGFFYGY-SSIVWLVVL 258 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhh-ccccccc-c-CCccccc-cHHHHHHHH
Confidence 8999999999999999999999999777777765444445555444444332 2443332 0 1112344 556778887
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843 238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
..++-|...+.. +|+.+-..-.....+..+++.+.|+.+||.++|....+|..+++.++.+|.....+
T Consensus 259 ~~a~gGLlvs~v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 259 LNAVGGLLVSLV----MKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred HHhccchhHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 777777776654 79999999999999999999999999999999999999999999999999944333
No 25
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.78 E-value=1.6e-18 Score=148.98 Aligned_cols=282 Identities=17% Similarity=0.257 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHHHHHHHHHhCcccCCCCChh-hhhHHHHHHHHHHHHHHHh
Q 018843 17 GLVVGYALCSSLLAVINKFAITKFN-YPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFD-TAKKFLPAAFVFYLAIFTN 94 (350)
Q Consensus 17 ~~~~~~~~~s~~~~~~nK~~~~~~~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 94 (350)
.....+..|.....++. .+.++.| .-..+++.|+++...-=++.- .|....+++ ..|++...-.+++....++
T Consensus 7 ai~~vf~GCcsnvv~lE-~L~~~~pgsgNLITFaqFlFia~eGlif~----skf~~~k~kiplk~Y~i~V~mFF~vnv~N 81 (330)
T KOG1583|consen 7 AISLVFGGCCSNVVFLE-LLVRNEPGSGNLITFAQFLFIATEGLIFT----SKFFTVKPKIPLKDYAITVAMFFIVNVTN 81 (330)
T ss_pred HHHHHHHhhhchHHHHH-HHHHhCCCCeeehHHHHHHHHHHhceeee----ccccccCCCCchhhhheehheeeeeeeec
Confidence 34444555454444443 3444443 345789999876544333321 122222233 4667776666666667889
Q ss_pred hhhhhc-cchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc---cCcc--------------c-
Q 018843 95 TNLLRH-ANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA---TDSG--------------F- 155 (350)
Q Consensus 95 ~~al~~-~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~---~~~~--------------~- 155 (350)
|.++++ +|.|...++|+..++.+++++++++|+|+ +.+++.+++...+|+++... .|.. +
T Consensus 82 N~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Y-s~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~ 160 (330)
T KOG1583|consen 82 NYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRY-SLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFF 160 (330)
T ss_pred cceeeecccceEEEEEecCcHHHHHHHHHHhcccee-ehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccch
Confidence 999997 89999999999999999999999999998 89999999999999998432 1111 1
Q ss_pred c-hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhc----CC--CC
Q 018843 156 T-LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASA----GS--WF 228 (350)
Q Consensus 156 ~-~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~ 228 (350)
. ..|+.+...+.+..|...++++...|+++-++-+.++|++++++ |.+.+..+|..+-+..+.... +. ..
T Consensus 161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsL---P~Flf~~~div~~~~~~~~se~~~~p~~g~~ 237 (330)
T KOG1583|consen 161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSL---PLFLFMGDDIVSHWRLAFKSESYLIPLLGFK 237 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhcc---chHHHhcchHHHHHHHHhcCcceeccccCcc
Confidence 1 25899999999999999999999999999899999999999998 666666666555443322110 11 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHH----HHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 229 VPDVFFAVALSCVFGLLISFFG----FAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
-|..|..++.. ...+|.. +..-.++++.+++++-.+|+.++.++|++.|+.++|+++|+|..+++.|.++|.
T Consensus 238 vP~~~~yLl~n----~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 238 VPSMWVYLLFN----VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred ccHHHHHHHHH----HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 22334444443 3333333 234468899999999999999999999999999999999999999999999998
Q ss_pred ccccCCC
Q 018843 305 QSVTGPG 311 (350)
Q Consensus 305 ~~~~~~~ 311 (350)
....+.+
T Consensus 314 ~~~~~~~ 320 (330)
T KOG1583|consen 314 NVWNHPK 320 (330)
T ss_pred HHHcCcc
Confidence 7666544
No 26
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.77 E-value=4.4e-17 Score=140.44 Aligned_cols=278 Identities=19% Similarity=0.240 Sum_probs=201.9
Q ss_pred HHHHHHHHHHHHHHHh-------cCCchHHHHHHHHHHHHHHHHHHHHhCccc-CC-------CC---Chh--hhhHHHH
Q 018843 23 ALCSSLLAVINKFAIT-------KFNYPGLLTALQYLTSALGVWVLGKFGFLH-HD-------PF---TFD--TAKKFLP 82 (350)
Q Consensus 23 ~~~s~~~~~~nK~~~~-------~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~-~~-------~~---~~~--~~~~~~~ 82 (350)
.++.+..+++.||.=+ +|++|.+-+..-++--..+++.+...|.+. .+ +. .++ ..+..++
T Consensus 12 vvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~ 91 (372)
T KOG3912|consen 12 VVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLP 91 (372)
T ss_pred hhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecC
Confidence 3446667778898753 477788765555554445555543332221 00 00 111 2345678
Q ss_pred HHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc---------
Q 018843 83 AAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS--------- 153 (350)
Q Consensus 83 ~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~--------- 153 (350)
.++|-..+..+.+.++.+++++.+|+++....+|+.+++..++++++ +.++|+++....+|++.+...|.
T Consensus 92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti-~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d 170 (372)
T KOG3912|consen 92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTI-TGRQWLGILFVSLGLVIVGSLDVHLVTDPYTD 170 (372)
T ss_pred hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhccc-chhhHHHHHHHHhhhheeeeeecccccCCccc
Confidence 89998888888999999999999999999999999999999999997 89999999999999998765432
Q ss_pred -ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHH-----Hhc------------cHHH
Q 018843 154 -GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWF-----LTG------------EYGE 215 (350)
Q Consensus 154 -~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~------------~~~~ 215 (350)
+.-..|+++.+++.+.-|..+++.+|..++.+.+|.+...|..+.+.+++..... ..+ |+..
T Consensus 171 ~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~ 250 (372)
T KOG3912|consen 171 YSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGD 250 (372)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHH
Confidence 2235799999999999999999999999999999999988888877543333322 112 1222
Q ss_pred HHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHH
Q 018843 216 VFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLV 295 (350)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~l 295 (350)
.+... . ..+..........+.-.+.|+.-....|..|+++-.+...++..+..+++...+.|.++..|+.|.++
T Consensus 251 ~~~~~----~--e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFli 324 (372)
T KOG3912|consen 251 AFAAL----Q--ESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLI 324 (372)
T ss_pred HHHHh----c--CCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHH
Confidence 22111 0 12222222222222223345555677899999999999999999999999999999999999999999
Q ss_pred Hhhhhhhhcccc
Q 018843 296 TIAGGVLYQQSV 307 (350)
Q Consensus 296 i~~g~~~~~~~~ 307 (350)
.+.|.++|+..-
T Consensus 325 Li~Gi~lY~~il 336 (372)
T KOG3912|consen 325 LIMGIILYNQIL 336 (372)
T ss_pred HHHHHHHHHHHH
Confidence 999999998653
No 27
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.77 E-value=6.4e-20 Score=156.84 Aligned_cols=284 Identities=14% Similarity=0.133 Sum_probs=211.2
Q ss_pred cccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHH-HH
Q 018843 5 RFDSTKQYYTTSGLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFL-PA 83 (350)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~ 83 (350)
|-.++|....+.+....|++ +..+.+..|-.. . .|-...-.|++.-.++..++...++. +-+-++..|+|+ +.
T Consensus 30 ri~~d~p~~gl~l~~vs~ff-~~~~vv~t~~~e--~-~p~e~a~~r~l~~mlit~pcliy~~~--~v~gp~g~R~~LiLR 103 (346)
T KOG4510|consen 30 RISKDKPNLGLLLLTVSYFF-NSCMVVSTKVLE--N-DPMELASFRLLVRMLITYPCLIYYMQ--PVIGPEGKRKWLILR 103 (346)
T ss_pred HhhcCCCccCceehhhHHHH-hhHHHhhhhhhc--c-ChhHhhhhhhhhehhhhheEEEEEee--eeecCCCcEEEEEee
Confidence 34456778878778888666 778877777433 2 26777777766555555554332211 111233334444 56
Q ss_pred HHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccC-----------
Q 018843 84 AFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATD----------- 152 (350)
Q Consensus 84 ~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~----------- 152 (350)
|++...+....+++++|+|.+.+.++..++|+++.++++.++|||+ ++.+.++....+.|++++..+.
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~-t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~ 182 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPF-TKFEALGSLITLLGVVLIVRPPFLFGDTTEGED 182 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCC-cHHHHHHHHHhhheEEEEecCCcccCCCccccc
Confidence 7778888888999999999999999999999999999999999997 8999999999999999964321
Q ss_pred ---cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCc
Q 018843 153 ---SGFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFV 229 (350)
Q Consensus 153 ---~~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (350)
.+.+..|.+.++.+++.-|-..++.|++-| +.+..-.+.|.+++.++...+.....+++.- + +.
T Consensus 183 ~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk--~~h~~msvsyf~~i~lV~s~I~~~~ig~~~l---------P--~c 249 (346)
T KOG4510|consen 183 SSQVEYDIPGTVAAISSVLFGASVYIILRYIGK--NAHAIMSVSYFSLITLVVSLIGCASIGAVQL---------P--HC 249 (346)
T ss_pred cccccccCCchHHHHHhHhhhhhHHHHHHHhhc--cccEEEEehHHHHHHHHHHHHHHhhccceec---------C--cc
Confidence 123457888889999988888888888877 3444444555556555433333333333321 1 14
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843 230 PDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVT 308 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~ 308 (350)
..-|+.++..|++++..+.....++|.-.|...++..+..-+++.++-+++|||.||++.|.|+++++.+..+....|.
T Consensus 250 gkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kw 328 (346)
T KOG4510|consen 250 GKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKW 328 (346)
T ss_pred ccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHH
Confidence 4567888899999999999999999999999999999999999999999999999999999999999988887665444
No 28
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.76 E-value=1e-15 Score=139.62 Aligned_cols=245 Identities=11% Similarity=0.057 Sum_probs=171.7
Q ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCC-hhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHh
Q 018843 33 NKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFT-FDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRS 111 (350)
Q Consensus 33 nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~ 111 (350)
.|.+. +.+.+... |+.++.+++.......+ + ++.+ ++.+..-+..|++......++..+.++++++.+..+.+
T Consensus 20 ~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~-~-~~~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~ 93 (290)
T TIGR00776 20 NVKIG-GGPYSQTL---GTTFGALILSIAIAIFV-L-PEFWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPIST 93 (290)
T ss_pred HhccC-CCHHHHHH---HHHHHHHHHHHHHHHHh-C-CcccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHH
Confidence 36544 44433333 66666666665443311 1 1111 12222223334445556688999999999999999988
Q ss_pred -HHHHHHHHHHHHHcccCCCchhh----HHHHHHHHHhhhhhcccCcc-------cc-hHHHHHHHHHHHHHHHHHHHHH
Q 018843 112 -LTPLLVALADTAFRRQPCPSRLT----FLSLVIILGGAVGYVATDSG-------FT-LTAYSWAFAYLVTITTEMVYIK 178 (350)
Q Consensus 112 -~~pi~v~ll~~l~~~e~~~~~~~----~~~~~l~~~G~~l~~~~~~~-------~~-~~G~~~~l~s~~~~a~~~v~~k 178 (350)
+.++++.+++.+++||| +++++ +.++++.++|+.+....+.+ .+ ..|+++++.+.++|++|.+..|
T Consensus 94 ~~~~v~~~l~~~~~f~e~-~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~ 172 (290)
T TIGR00776 94 GFQLVGGTLFGVIVFGEW-STSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAK 172 (290)
T ss_pred HHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999 58999 99999999999997543211 33 6899999999999999999999
Q ss_pred HHhhcCCCCcchhHHHHhH---H-HHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HH
Q 018843 179 HMVTNLGLNTWGFVLYNNL---L-SLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AA 253 (350)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 253 (350)
+. +.++++..+.+.. . +.++.+.. . +..+ +.+...|..++ .|++ ..+.+..+ .+
T Consensus 173 ~~----~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~~~~-----------~~~~~~~~~~~-~Gi~-~~ia~~~y~~~ 231 (290)
T TIGR00776 173 AF----GVDGLSVLLPQAIGMVIGGIIFNLGH---I-LAKP-----------LKKYAILLNIL-PGLM-WGIGNFFYLFS 231 (290)
T ss_pred Hc----CCCcceehhHHHHHHHHHHHHHHHHH---h-cccc-----------hHHHHHHHHHH-HHHH-HHHHHHHHHHH
Confidence 75 3566666443333 2 22222211 0 0000 11223344444 7787 46666666 88
Q ss_pred hh-ccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhH----HHHHHHhhhhhhhcc
Q 018843 254 RK-AISATAFTVTGVVNKFLTVVINVLIWDKHASPFGL----ICLLVTIAGGVLYQQ 305 (350)
Q Consensus 254 i~-~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~----~G~~li~~g~~~~~~ 305 (350)
.+ +.++.+.++.+.++|+.+++++++++||+.+..|+ +|.++++.|+.+...
T Consensus 232 ~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 232 AQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 88 99999999999999999999999999999999999 999999999987654
No 29
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.75 E-value=1.4e-16 Score=140.99 Aligned_cols=214 Identities=18% Similarity=0.176 Sum_probs=167.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc
Q 018843 74 FDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS 153 (350)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~ 153 (350)
+++..++..+++++.....+.+.++++++++++++++++..+++++++++++|||. ++++|.++.+.++|+++...++.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~l-s~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRL-SRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHccc-chhhHHHHHHHHHHHheeecCCc
Confidence 45666777889999999999999999999999999999999999999999999997 89999999999999999654211
Q ss_pred -----------------ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHH
Q 018843 154 -----------------GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEV 216 (350)
Q Consensus 154 -----------------~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (350)
.....|++..++++++.++..++.++.+|+.+.+.|.+.......++++..+.... .|..+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~-~~~~~~ 171 (244)
T PF04142_consen 93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLL-SDGSAI 171 (244)
T ss_pred cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhc-cccccc
Confidence 11247999999999999999999999999877777766655556665444444332 233222
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHH
Q 018843 217 FAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVT 296 (350)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li 296 (350)
.+. ..++++ +...|..++..++.|...++ .+|+.+...-.....+..+++.++++.+||.++|....+|..++
T Consensus 172 ~~~--g~f~G~-~~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 172 SES--GFFHGY-SWWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred ccC--Cchhhc-chHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 110 001233 34456666666565555554 58999999999999999999999999999999999999998753
No 30
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.73 E-value=1.5e-16 Score=131.45 Aligned_cols=147 Identities=22% Similarity=0.322 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCC-chhH
Q 018843 159 AYSWAFAYLVTITTEMVYIKHMVTN-----LGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWF-VPDV 232 (350)
Q Consensus 159 G~~~~l~s~~~~a~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 232 (350)
|.++++.+.++.+++.++.|+..++ .+.+++++++|+++.+++++.+..+..++.............+.. ++..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7889999999999999999999987 588999999999999876666655555444322221111111121 4467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 233 FFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
+..++..|+++++.+++.+++++++||++.++.+.+|.+..+++|+++|||++|+.+++|+++.+.|+++|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999975
No 31
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.71 E-value=2.6e-14 Score=125.12 Aligned_cols=271 Identities=14% Similarity=0.091 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCc--ccCCCC--ChhhhhHHHHHHHHHHHHHH
Q 018843 17 GLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGF--LHHDPF--TFDTAKKFLPAAFVFYLAIF 92 (350)
Q Consensus 17 ~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~ 92 (350)
..+..|.... .+-+..|.+- ..+ +..+...|.+.+...+.......+ +..+.. +++.+......+++...+..
T Consensus 11 ~~l~Ay~lwG-~lp~y~kll~-~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~ 87 (293)
T COG2962 11 LALLAYLLWG-LLPLYFKLLE-PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWW 87 (293)
T ss_pred HHHHHHHHHH-HHHHHHHHHc-cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 4445555544 4456678544 444 677999999888777776544221 111111 12223334455666666777
Q ss_pred HhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchHHHHHHHHHHHHHHH
Q 018843 93 TNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLTAYSWAFAYLVTITT 172 (350)
Q Consensus 93 ~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~G~~~~l~s~~~~a~ 172 (350)
.+.+|.+.-..-.++.=...+|++.++++.+++|||+ ++.++++++++.+|+..-.....++++....+ ++++++
T Consensus 88 lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErl-s~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~sf~~ 162 (293)
T COG2962 88 LFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERL-SRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALSFGL 162 (293)
T ss_pred HhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHHHHH
Confidence 8889988777777888889999999999999999996 99999999999999999877777787765444 678899
Q ss_pred HHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHH---HhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH
Q 018843 173 EMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWF---LTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFF 249 (350)
Q Consensus 173 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (350)
|...-|++ +.++.+-.....+. +.|+... ..+|-+. +.. . .+...+..++..|..+..--.+
T Consensus 163 Ygl~RK~~----~v~a~~g~~lE~l~---l~p~al~yl~~l~~~~~---~~~----~-~~~~~~~LLv~aG~vTavpL~l 227 (293)
T COG2962 163 YGLLRKKL----KVDALTGLTLETLL---LLPVALIYLLFLADSGQ---FLQ----Q-NANSLWLLLVLAGLVTAVPLLL 227 (293)
T ss_pred HHHHHHhc----CCchHHhHHHHHHH---HhHHHHHHHHHHhcCch---hhh----c-CCchHHHHHHHhhHHHHHHHHH
Confidence 98776654 45554443333333 2333332 2223222 100 0 1334566666666665554333
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843 250 GFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 250 ~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
-..+-|+.+=.+.++..+++|....+++++++||+++..++...+.+-+|..+|.....++
T Consensus 228 f~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~ 288 (293)
T COG2962 228 FAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYT 288 (293)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3378899999999999999999999999999999999999999999999999999876543
No 32
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.68 E-value=9.6e-16 Score=137.54 Aligned_cols=224 Identities=18% Similarity=0.181 Sum_probs=171.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc----
Q 018843 78 KKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS---- 153 (350)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~---- 153 (350)
|.-+..+.+.+...++++.||.|++++..+++.+++-+|+.+++.++..||+ +..+.+++++.++|++++.-+|.
T Consensus 160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~f-t~sKllav~~si~GViiVt~~~s~~~~ 238 (416)
T KOG2765|consen 160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERF-TLSKLLAVFVSIAGVIIVTMGDSKQNS 238 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchh-hHHHHHHHHHhhccEEEEEeccccccc
Confidence 3345566677777888999999999999999999999999999999999997 99999999999999999876633
Q ss_pred ----ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCcchhH-HHHhHHHHH-HHHHHHHHhccHHHHHHHHHHhcCC
Q 018843 154 ----GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLG-LNTWGFV-LYNNLLSLI-ISPFFWFLTGEYGEVFAALVASAGS 226 (350)
Q Consensus 154 ----~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~-~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (350)
+....|.++++.+++.||+|.++.||...+++ --..++. .|..++..+ +.|...+. +.... +.-.
T Consensus 239 ~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL--~~~~~------e~F~ 310 (416)
T KOG2765|consen 239 DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL--DFFGE------ERFE 310 (416)
T ss_pred cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH--HHhcc------Cccc
Confidence 23468999999999999999999999887663 1222222 244444332 33333332 11111 1011
Q ss_pred CCchhHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 227 WFVPDVFFAVALSCVFGLLIS-FFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
.++......++..+.++++.+ |.+.++.-.++|++.++-..+...++.+...++=+.++|+.+++|..-+++|....++
T Consensus 311 lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 311 LPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred CCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence 223334455566666666655 7777999999999999999999999999999998999999999999999999999887
Q ss_pred cccCC
Q 018843 306 SVTGP 310 (350)
Q Consensus 306 ~~~~~ 310 (350)
..+..
T Consensus 391 ~~~~~ 395 (416)
T KOG2765|consen 391 SSENS 395 (416)
T ss_pred ccccc
Confidence 76543
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.58 E-value=4.6e-16 Score=132.53 Aligned_cols=275 Identities=17% Similarity=0.143 Sum_probs=193.0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHH
Q 018843 9 TKQYYTTSGLVVGYALCSSLLAVINKFAITK-FNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVF 87 (350)
Q Consensus 9 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~-~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (350)
.|+.+....+-=.-..++...++.+.++-.+ .+.|..-++.-...-.++.-++..+|. +.-+-.|++.+++++.-
T Consensus 13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~D 88 (336)
T KOG2766|consen 13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVD 88 (336)
T ss_pred chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEe
Confidence 4444443333222233344556667776663 677776665555555555555444432 22233577788888877
Q ss_pred HHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc-------ccc-hHH
Q 018843 88 YLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS-------GFT-LTA 159 (350)
Q Consensus 88 ~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~-------~~~-~~G 159 (350)
+-..++-..|.||++....+.+.+-..+.+++++|+++|.|+ +..++.++++++.|++++..+|. ..+ ..|
T Consensus 89 VEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrY-rlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~G 167 (336)
T KOG2766|consen 89 VEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRY-RLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKG 167 (336)
T ss_pred ecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHH-hhheeeeEEeEecceEEEEEeeeccccccCCCCCccC
Confidence 777788889999999999999999999999999999999998 78899999999999998655442 223 479
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 018843 160 YSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALS 239 (350)
Q Consensus 160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
+++++.++=+||..++..+.+.| +.+..+.+....+.+.++..+-.+. |...... -+| + |-...+.
T Consensus 168 D~lvi~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~--~~~~~~t------l~w-~---~~i~~yl 233 (336)
T KOG2766|consen 168 DFLVIAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIF--ERHHVST------LHW-D---SAIFLYL 233 (336)
T ss_pred cEEEEecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhh--hccceee------Eee-h---HHHHHHH
Confidence 99999999999999999999988 5566677666666665544444322 2211110 122 1 2222222
Q ss_pred -HHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 240 -CVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 240 -~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
..+..+.-|... ..+|..|++...+.-...+..++++ ..||-+.+|...+..+.+..|.++|.
T Consensus 234 ~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 234 RFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS 298 (336)
T ss_pred HHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence 233444455555 6789999999988888888888877 56777899999999999999999994
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.35 E-value=8.1e-12 Score=109.72 Aligned_cols=192 Identities=14% Similarity=0.141 Sum_probs=131.1
Q ss_pred cchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc---------------------------
Q 018843 101 ANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS--------------------------- 153 (350)
Q Consensus 101 ~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~--------------------------- 153 (350)
+++|.....++..++++++.++.+.+||+ ...++++..++..|++....+|.
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~-~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~ 80 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQV-TQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMF 80 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceee-ehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccc
Confidence 57788999999999999999999999998 58889999999999875221111
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhc--CCCCchh
Q 018843 154 GFTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASA--GSWFVPD 231 (350)
Q Consensus 154 ~~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 231 (350)
...+.|....+.++.+.++..++.++..|+++.. +|....++.+........++.....+..+... .++ +..
T Consensus 81 g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 154 (222)
T TIGR00803 81 GNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGY-PTA 154 (222)
T ss_pred ccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCC-chH
Confidence 1235677778888888899999999887654332 44433333221111111111111111111000 111 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhh
Q 018843 232 VFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLY 303 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~ 303 (350)
.|..+ +.....+.+..+++|+.++.+.++...++++++.++|+++|||+++..++.|+.+++.|+.+|
T Consensus 155 ~~~~~----~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 155 VWIVG----LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHH----HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 33333 223333344557899999999999999999999999999999999999999999999998876
No 35
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.23 E-value=3.2e-11 Score=99.38 Aligned_cols=221 Identities=10% Similarity=0.058 Sum_probs=168.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCc--c
Q 018843 77 AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDS--G 154 (350)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~--~ 154 (350)
.++.-|.+++..+..+.+..+++.++++.++.+..+.--++.+++++.++.|+ ...++++.++.+.|+++..+-|. .
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~-~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRF-MGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccch-hhhhHHHHHHHhCcEEEEEeccchhh
Confidence 55667888888889999999999999999999999999999999999999997 88899999999999999886554 5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHH-----HHHHHHHHHhccHHHHHHHHHHhcCCCCc
Q 018843 155 FTLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSL-----IISPFFWFLTGEYGEVFAALVASAGSWFV 229 (350)
Q Consensus 155 ~~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (350)
.++.|+..+++|+...|+|-++.|+...+.+.+. ...+++-++. .-+|...+.......+..+ .
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gd--aa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsF---------A 200 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGD--AAHFMSCLGFFNLCFISFPALILAFTGVEHLQSF---------A 200 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchh--HHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHH---------h
Confidence 6789999999999999999999999987655543 2222322221 1222222221112211111 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843 230 PDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
...|..++..+.+..+.++....++..+.|...|+-.......-.....++=+-..+....+|..++..|.++......+
T Consensus 201 ~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~ 280 (290)
T KOG4314|consen 201 AAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK 280 (290)
T ss_pred hCCchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence 23466777777777888887778888889988888777777777777777766677888999999999999887655443
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.19 E-value=1.3e-10 Score=89.11 Aligned_cols=135 Identities=17% Similarity=0.177 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 018843 160 YSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALS 239 (350)
Q Consensus 160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
.++++.+++++++..++.|--.+ +.||.-.+..-+...+..+....+..+++... .-.++..|..++.+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~---------~~~~~k~~lflilS 73 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG---------GEIGPKSWLFLILS 73 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc---------cccCcceehhhhHH
Confidence 58999999999999999998777 45555455555555444444444555655432 11266788999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 240 CVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
|+.+...-++.|+++|+-.++.+....-..+++++++|+.+++|++|..+|+|++++.+|.++...
T Consensus 74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 976666667777999999999999999999999999999999999999999999999999987543
No 37
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.12 E-value=6.5e-10 Score=87.97 Aligned_cols=118 Identities=17% Similarity=0.191 Sum_probs=94.9
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCccc-CCCCChhhhhHHHHHHHH-HHHHHHHhhhhhhccchhHH
Q 018843 29 LAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLH-HDPFTFDTAKKFLPAAFV-FYLAIFTNTNLLRHANVDTF 106 (350)
Q Consensus 29 ~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~s~s~~ 106 (350)
....+|...++.+ |....++|+..+.+ +........++ .++.+++.+......+++ ......+.+.++++.+++..
T Consensus 6 ~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 83 (126)
T PF00892_consen 6 YSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV 83 (126)
T ss_pred HHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence 3566788888876 88999999999987 44433322222 244556666677777777 46668889999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhc
Q 018843 107 IVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV 149 (350)
Q Consensus 107 ~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~ 149 (350)
+.+.++.|+++.+++++++||+ ++++++.++++.+.|+.++.
T Consensus 84 ~~~~~~~pv~~~i~~~~~~~e~-~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 84 SILQYLSPVFAAILGWLFLGER-PSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 59999999999999998753
No 38
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.01 E-value=1.2e-09 Score=86.34 Aligned_cols=124 Identities=16% Similarity=0.280 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Q 018843 168 VTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLIS 247 (350)
Q Consensus 168 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (350)
++++.+.++.|+..++ .++.....+....+.+ ..+.....+..+ . .. .+...+......++++....
T Consensus 1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~--------~~-~~~~~~~~~~~~~~~~~~~~ 67 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP-F--------KN-LSPRQWLWLLFLGLLGTALA 67 (126)
T ss_pred ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc-c--------cC-CChhhhhhhhHhhccceehH
Confidence 4678899999998884 6788888888888665 333332222221 1 11 14445666677777765555
Q ss_pred H-HHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 248 F-FGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 248 ~-~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
+ ..++++++.++...+...+++|+++.++++++++|++++.+++|+++++.|+.+..
T Consensus 68 ~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 68 YLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4 44599999999999999999999999999999999999999999999999988753
No 39
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.00 E-value=3.4e-09 Score=82.78 Aligned_cols=105 Identities=20% Similarity=0.165 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHhCccc---CCCCChhhhhHHHHHHHHHH-HHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHH
Q 018843 48 ALQYLTSALGVWVLGKFGFLH---HDPFTFDTAKKFLPAAFVFY-LAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTA 123 (350)
Q Consensus 48 ~~r~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l 123 (350)
.+|+..+.+.+......+++. .+.++++++..++..+++.. ....+++.++++.+ +....+.+++|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 467777777777654443211 11222333444455566665 66788999999999 58889999999999999999
Q ss_pred HcccCCCchhhHHHHHHHHHhhhhhcccCcc
Q 018843 124 FRRQPCPSRLTFLSLVIILGGAVGYVATDSG 154 (350)
Q Consensus 124 ~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~ 154 (350)
++|||+ +++++.++.++++|+++...+|.+
T Consensus 81 ~~~er~-~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERL-SPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCC-CHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999996 899999999999999999887754
No 40
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.92 E-value=1.9e-08 Score=77.43 Aligned_cols=119 Identities=12% Similarity=0.112 Sum_probs=98.1
Q ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCccc--CCCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHH
Q 018843 29 LAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLH--HDPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTF 106 (350)
Q Consensus 29 ~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~ 106 (350)
-.+..|..+++.+ |.+-+..|.++....+........+. ....+++.+..+..-|+.......+++.|++--.+|..
T Consensus 18 ~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~V 96 (140)
T COG2510 18 TPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRV 96 (140)
T ss_pred HHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceE
Confidence 3566798888777 99999999998888887765533322 22356666666667777677778899999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhc
Q 018843 107 IVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV 149 (350)
Q Consensus 107 ~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~ 149 (350)
.-+..++|+++.++++++++|| ++.++|+++.+.++|+++++
T Consensus 97 vPldk~svvl~~lls~lfL~E~-ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 97 VPLDKTSVVLAVLLSILFLGER-LSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred EEcccccHHHHHHHHHHHhcCC-CCHHHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999 59999999999999998865
No 41
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.81 E-value=3.2e-07 Score=84.16 Aligned_cols=138 Identities=10% Similarity=0.077 Sum_probs=101.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHH
Q 018843 156 TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFA 235 (350)
Q Consensus 156 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (350)
...|..+.+.++++++...+..|.. . +.++.+...+...++.+++.+.....++....... ..+...+..
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~ 75 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-------IQTPQKIFM 75 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-------HcCHHHHHH
Confidence 4579999999999999999999764 3 57888899998888765333333333332221110 002223333
Q ss_pred HHHHHHHHHHH-HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 236 VALSCVFGLLI-SFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 236 ~~~~~~~~~~~-~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
.. .+.+.... ..+.++++++.++...++..+..|++..++++++++|+++..+++|+++.++|+.+..
T Consensus 76 ~~-~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 76 LA-VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HH-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 33 33444444 4455599999999999999999999999999999999999999999999999998754
No 42
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.80 E-value=1.7e-06 Score=76.71 Aligned_cols=214 Identities=13% Similarity=0.120 Sum_probs=149.6
Q ss_pred CCCCh--hhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhH----HHHHHHH
Q 018843 70 DPFTF--DTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTF----LSLVIIL 142 (350)
Q Consensus 70 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~----~~~~l~~ 142 (350)
+.++. +.+.--+..|++.......++.+.++..+|.+.=+ ...+.+.+.+.++++++|- ++..++ .++++.+
T Consensus 36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW-~~~~~~~~G~~Al~lii 114 (269)
T PF06800_consen 36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEW-TTTTQKIIGFLALVLII 114 (269)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCC-CCcchHHHHHHHHHHHH
Confidence 34443 55555667788888889999999999888776544 3677888999999999995 454444 4788888
Q ss_pred HhhhhhcccCccc--------chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHH
Q 018843 143 GGAVGYVATDSGF--------TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYG 214 (350)
Q Consensus 143 ~G~~l~~~~~~~~--------~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (350)
+|+.+.+..|.+. ...|+...+++.+.|..|.+..|.. +.++++..+=+++-..+...+..... + .
T Consensus 115 iGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqaiGm~i~a~i~~~~~-~-~ 188 (269)
T PF06800_consen 115 IGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQAIGMLIGAFIFNLFS-K-K 188 (269)
T ss_pred HHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHHHHHHHHHHHHhhcc-c-c
Confidence 9999977654322 2359999999999999999998763 55676665544433221112221211 1 1
Q ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchh----hH
Q 018843 215 EVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPF----GL 290 (350)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~----~~ 290 (350)
.. .+...| .=...|++-...+.+.+.+.++.+..+.=..+-+..+.+.+.|.+++||.=+.. .+
T Consensus 189 ~~-----------~~k~~~-~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~ 256 (269)
T PF06800_consen 189 PF-----------FEKKSW-KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL 256 (269)
T ss_pred cc-----------cccchH-HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence 00 011222 224455666666777778889999999999999999999999999999998866 45
Q ss_pred HHHHHHhhhhhh
Q 018843 291 ICLLVTIAGGVL 302 (350)
Q Consensus 291 ~G~~li~~g~~~ 302 (350)
+|.++++.|..+
T Consensus 257 ~G~~Liv~G~il 268 (269)
T PF06800_consen 257 IGLILIVIGAIL 268 (269)
T ss_pred HHHHHHHHhhhc
Confidence 688888887654
No 43
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.72 E-value=1.7e-07 Score=85.29 Aligned_cols=130 Identities=11% Similarity=0.111 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHH-HHHHHHHHHh--ccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843 160 YSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSL-IISPFFWFLT--GEYGEVFAALVASAGSWFVPDVFFAV 236 (350)
Q Consensus 160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
.++.+.+++++|.+.+++|+..+++ ++ ...+...... ++.|...... .++. ..+...|...
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~--~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~~~~~~ 66 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE--PD--FLWWALLAHSVLLTPYGLWYLAQVGWS------------RLPATFWLLL 66 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch--hH--HHHHHHHHHHHHHHHHHHHhcccCCCC------------CcchhhHHHH
Confidence 5678999999999999999887642 22 2344444433 3334332210 0111 0122344555
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 237 ALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
+..++......++.+.+.++.++...++..+..|+++.++++++++|+++..+++|+.+++.|+.+...
T Consensus 67 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 67 AISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 566666666777777999999999999999999999999999999999999999999999999987654
No 44
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.71 E-value=9.7e-07 Score=79.19 Aligned_cols=140 Identities=11% Similarity=0.056 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843 158 TAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA 237 (350)
Q Consensus 158 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
.|..++++++++++...+..|. .. +.++.+..++-.+++.+++.+.....++.....+..+ .......+....
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 74 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LK--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLK----RIQKRPLILSLL 74 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hc--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHh----CcccchHHHHHH
Confidence 3889999999999999999997 44 5789999999888876554333322233221111110 000112244555
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
..+++......+.+++++++++...++..+..|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus 75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 6666655555555689999999999999999999999999999999999999999999999988653
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.54 E-value=6.6e-06 Score=73.80 Aligned_cols=119 Identities=16% Similarity=0.019 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHH-HHHHHHhhhhhhccch
Q 018843 26 SSLLAVINKFAITKFNY-PGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVF-YLAIFTNTNLLRHANV 103 (350)
Q Consensus 26 s~~~~~~nK~~~~~~~~-p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~s~ 103 (350)
-....+..|...++.+. +.....+++.++.+++.+.......+ +..+.+++...+..+++. .....+++.++++.++
T Consensus 140 ~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 218 (260)
T TIGR00950 140 FALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN-PQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDP 218 (260)
T ss_pred HHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 44445667877765542 33455578888888877765543222 222444455555566664 4456779999999999
Q ss_pred hHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhh
Q 018843 104 DTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAV 146 (350)
Q Consensus 104 s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~ 146 (350)
+..+.+.++.|++.+++++++++|+ ++..++.+..+.++|+.
T Consensus 219 ~~~s~~~~~~pv~~~ll~~~~~~E~-~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 219 SAASILALAEPLVALLLGLLILGET-LSLPQLIGGALIIAAVL 260 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999 58999999999999863
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.44 E-value=6.1e-06 Score=77.43 Aligned_cols=136 Identities=14% Similarity=0.255 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHH-HHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843 159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSL-IISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA 237 (350)
Q Consensus 159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
=+..++...++|+.+.++.|..++ .+.++.....|-..++. +++++......+. .. +. .+...|..+.
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~~--------~~-~~~~~~~~l~ 82 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-SL--------PP-LSVSILSKIG 82 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-cc--------Cc-chHHHHHHHH
Confidence 456777888999999999999886 48888888888777754 3444433221100 00 00 0223455666
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHc------cCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLI------WDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~------~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
..|++++..+...+.++++++|...++..++.|+++.++++++ ++|+++..+++|+++.++|+.+...
T Consensus 83 l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 83 LLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 6777774444455689999999999999999999999999999 6999999999999999999987653
No 47
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.38 E-value=1.2e-05 Score=62.67 Aligned_cols=104 Identities=18% Similarity=0.303 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHH
Q 018843 197 LLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVV 275 (350)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ 275 (350)
..+.+.++......++..+..+.+. . ..+...+..|+++...++..+ ++.++.++ ..+....+.|+++.+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~l 76 (113)
T PF13536_consen 6 LFSVLFLLIILLIRGRLRDLFRALR-------R-KPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTAL 76 (113)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHH-------h-CcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHH
Confidence 3444444444444455555443322 1 223445555666664445554 88999995 777999999999999
Q ss_pred HHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843 276 INVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 276 ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
+++++++|+++..+++|..++++|+.+..+.+.+
T Consensus 77 l~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 77 LSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999999998876554
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.35 E-value=2.7e-05 Score=61.83 Aligned_cols=121 Identities=13% Similarity=0.142 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843 158 TAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA 237 (350)
Q Consensus 158 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
.|+++.+.+.++.+.-.++.|+-.++.+. .+... ... ....... ++ ...+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~----~~~---~~~~~~~------------------~p---~~~i 51 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAW----DFI---AALLAFG------------------LA---LRAV 51 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchh----HHH---HHHHHHh------------------cc---HHHH
Confidence 47888999999998888888876664332 11100 000 0000000 11 1234
Q ss_pred HHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHH--ccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843 238 LSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVL--IWDKHASPFGLICLLVTIAGGVLYQQSVT 308 (350)
Q Consensus 238 ~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~--~~~e~~t~~~~~G~~li~~g~~~~~~~~~ 308 (350)
+.|+...+.++..+ .++++.+...........++...+.++. +|||++|+.+++|++++++|+++.+..++
T Consensus 52 ~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 52 LLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 55666777776666 8999999999999888888888777875 89999999999999999999999875433
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.33 E-value=5.5e-06 Score=75.74 Aligned_cols=215 Identities=15% Similarity=0.180 Sum_probs=115.7
Q ss_pred HHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc---Ccc-cch----
Q 018843 86 VFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT---DSG-FTL---- 157 (350)
Q Consensus 86 ~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~---~~~-~~~---- 157 (350)
++..+...+..|+.+.|.+..+-+..+..++..+++..++|||+ +++++.+..++++|..++... +.+ .+.
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~-~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~ 137 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKL-TRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI 137 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccc-hHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence 34555678889999999999999999999999999999999996 899999999999999875421 111 110
Q ss_pred -----HHH-HHHHH-HHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCch
Q 018843 158 -----TAY-SWAFA-YLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVP 230 (350)
Q Consensus 158 -----~G~-~~~l~-s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (350)
.+. .+... ..++..+.....+|..+ . + ...|...++.+ .....+.........+..-.......++
T Consensus 138 ~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g~-~--~---i~vyi~i~sl~-Gs~tvl~~K~i~~~i~~~~~g~~~f~~~ 210 (300)
T PF05653_consen 138 ALLSQPGFLVYFILVLVLILILIFFIKPRYGR-R--N---ILVYISICSLI-GSFTVLSAKAISILIKLTFSGDNQFTYP 210 (300)
T ss_pred HHhcCcceehhHHHHHHHHHHHHHhhcchhcc-c--c---eEEEEEEeccc-cchhhhHHHHHHHHHHHHhcCchhhhhh
Confidence 111 11111 11111111111111111 1 1 12222222210 0000000000000000000000011244
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH-HHHHHHHHHHccCC--CCchh----hHHHHHHHhhhhhhh
Q 018843 231 DVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVN-KFLTVVINVLIWDK--HASPF----GLICLLVTIAGGVLY 303 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~-~v~~~~ls~~~~~e--~~t~~----~~~G~~li~~g~~~~ 303 (350)
..|..++...+....-.+....++++.+++......+.- ...+++-|.++|+| ..++. ...|..+++.|+.+.
T Consensus 211 ~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL 290 (300)
T PF05653_consen 211 LTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLL 290 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhee
Confidence 455555444444444445666899988886655444433 34556667778885 44553 455788889998887
Q ss_pred ccccc
Q 018843 304 QQSVT 308 (350)
Q Consensus 304 ~~~~~ 308 (350)
+..|.
T Consensus 291 ~~~~~ 295 (300)
T PF05653_consen 291 SSSKD 295 (300)
T ss_pred eccCc
Confidence 64443
No 50
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.25 E-value=3.9e-05 Score=59.40 Aligned_cols=63 Identities=24% Similarity=0.251 Sum_probs=56.9
Q ss_pred HHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc
Q 018843 87 FYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA 150 (350)
Q Consensus 87 ~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~ 150 (350)
+....++...+++..|.+.+..+.++.++++.+++++++|||+ +.+++.++.+.++|++++..
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~l-s~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPV-SPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHhc
Confidence 4445677889999999999999999999999999999999995 99999999999999988653
No 51
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.16 E-value=9.1e-05 Score=65.67 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=110.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHH
Q 018843 156 TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFA 235 (350)
Q Consensus 156 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (350)
+..|+++.+.+-+.++..-.+.|-+ + +.++.++..+-.+.+.+...+......++.+..+.. .++..+..
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~--~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~-------~~p~~~~~ 74 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-E--PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLL-------KQPKTLLM 74 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-c--cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-------hCcHHHHH
Confidence 4579999999999999999888755 4 567778888888888766665555555666665432 25555555
Q ss_pred HHHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843 236 VALSCVFGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 236 ~~~~~~~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~ 306 (350)
+... ..-...|...| |+..+-.....|.--+++|++.+++|.++++|+++..|++...+..+|+..-.+.
T Consensus 75 ~~l~-a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 75 LALT-ALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHH-HHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 5444 34455677777 9999999999999999999999999999999999999999999999999986554
No 52
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.10 E-value=0.00026 Score=64.83 Aligned_cols=121 Identities=17% Similarity=0.159 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCChhhhhHHHHHHHHHHHH-HHHhhhhhhccchh
Q 018843 26 SSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFTFDTAKKFLPAAFVFYLA-IFTNTNLLRHANVD 104 (350)
Q Consensus 26 s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~al~~~s~s 104 (350)
.....++.|...++.+ |.... +..+.+.+.+.+....... ....+...+...+..+++.... ..++++++++.+++
T Consensus 160 ~a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~ 236 (293)
T PRK10532 160 WAIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTR 236 (293)
T ss_pred HHHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 3344455566655444 55554 4445555555544333211 1122333333334555554433 55789999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc
Q 018843 105 TFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA 150 (350)
Q Consensus 105 ~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~ 150 (350)
.++++..+.|++..++++++++|+ ++..++.+..+.++|++....
T Consensus 237 ~as~~~~l~Pv~a~l~~~l~lgE~-~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 237 TFGTLMSMEPALAAVSGMIFLGET-LTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999 599999999999999988653
No 53
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.08 E-value=0.00024 Score=64.99 Aligned_cols=108 Identities=16% Similarity=0.078 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCcccCC-CCChhhhhHHHHHHHHHH-HHHHHhhhhhhccchhHHHHHHhHHHHHHHHH
Q 018843 43 PGLLTALQYLTSALGVWVLGKFGFLHHD-PFTFDTAKKFLPAAFVFY-LAIFTNTNLLRHANVDTFIVFRSLTPLLVALA 120 (350)
Q Consensus 43 p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll 120 (350)
+...+.+++.++..++.+.......... ..+.+.+..+...+++.. ....+++.++++.+++..+++..+.|++.+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~ 256 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLL 256 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 5556778888887776665433211111 113344555555566533 44567999999999999999999999999999
Q ss_pred HHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843 121 DTAFRRQPCPSRLTFLSLVIILGGAVGYVAT 151 (350)
Q Consensus 121 ~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~ 151 (350)
++++++|+ ++..++.+.++.+.|+.+....
T Consensus 257 ~~~~l~E~-~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 257 GTGLGGET-LSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHcCCC-CcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 5999999999999999887644
No 54
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.02 E-value=0.00013 Score=68.54 Aligned_cols=134 Identities=10% Similarity=0.167 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCC-cchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCC-chhHHHHHH
Q 018843 160 YSWAFAYLVTITTEMVYIKHMVTNLGLN-TWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWF-VPDVFFAVA 237 (350)
Q Consensus 160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 237 (350)
..+.+.--.+...+.+..|...+. .+ |+.+..++..++.++..+.... + .... +... ....|..++
T Consensus 51 ~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~-~-~~~~--------~~~~~~~~~~~~ll 118 (350)
T PTZ00343 51 ALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT-G-FRKI--------PRIKSLKLFLKNFL 118 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh-C-CCCC--------CCCCCHHHHHHHHH
Confidence 344444444445667788888874 45 8888888888765433332221 1 1000 0111 112456777
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
..|+++....+..+.++++++++..++...+.|++++++++++++|+++..+++|++++++|+.+...
T Consensus 119 p~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 119 PQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 77888877766666899999999999999999999999999999999999999999999999998653
No 55
>PRK11689 aromatic amino acid exporter; Provisional
Probab=97.99 E-value=0.00025 Score=64.96 Aligned_cols=77 Identities=17% Similarity=0.138 Sum_probs=63.0
Q ss_pred ChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc
Q 018843 73 TFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA 150 (350)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~ 150 (350)
+.+.+...+..++......++++.++++.+++..+.+.++.|++..++++++++|+ ++..++++.++++.|+.+...
T Consensus 211 ~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~-~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 211 SLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTP-LSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCC-CcHHHHHHHHHHHHhHHHHhh
Confidence 44444444444444444467799999999999999999999999999999999999 599999999999999987653
No 56
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.88 E-value=0.00011 Score=56.94 Aligned_cols=63 Identities=14% Similarity=0.120 Sum_probs=54.5
Q ss_pred HHHHHHHHHH-HHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 242 FGLLISFFGF-AARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 242 ~~~~~~~~~~-~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
+....++..+ .++++.+.........+.++.+.++|+++|||++|+.+++|+.++++|+.+..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4444444444 88999999999988889999999999999999999999999999999998754
No 57
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.85 E-value=0.00058 Score=62.84 Aligned_cols=132 Identities=15% Similarity=0.065 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHhhcCCCC--cchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHH
Q 018843 168 VTITTEMVYIKHMVTNLGLN--TWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLL 245 (350)
Q Consensus 168 ~~~a~~~v~~k~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (350)
.++..+.++++++.++.... ++-+++.|.....+.......... .. . .+...+.-....+++-..
T Consensus 10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-~~-----------~-~~~~~~~~~~~~~~~~~~ 76 (303)
T PF08449_consen 10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-FP-----------K-SRKIPLKKYAILSFLFFL 76 (303)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-cc-----------C-CCcChHHHHHHHHHHHHH
Confidence 34456778888888765545 555555555554332222222211 00 0 011223444455566667
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCC
Q 018843 246 ISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGA 312 (350)
Q Consensus 246 ~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~ 312 (350)
.....+.++++.+-.+..+....+++...+++.++++++.+..++++..++.+|+.+....+.++++
T Consensus 77 ~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~ 143 (303)
T PF08449_consen 77 ASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS 143 (303)
T ss_pred HHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence 7777788999999999999999999999999999999999999999999999999999877665443
No 58
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.84 E-value=0.00054 Score=62.89 Aligned_cols=124 Identities=15% Similarity=0.090 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHH
Q 018843 161 SWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSC 240 (350)
Q Consensus 161 ~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
.+.++++++|+...+..|...+ +.++.....+-..++.+.+.. +...+. . + +......|
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~--~~~~~~-------------~-~---~~~~~~~g 65 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIF--FVARPK-------------V-P---LNLLLGYG 65 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHH--HhcCCC-------------C-c---hHHHHHHH
Confidence 5678899999999999998776 578888877766664322211 111110 0 1 11222333
Q ss_pred HHHHHHHHH-HHHHhhc-cchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 241 VFGLLISFF-GFAARKA-ISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 241 ~~~~~~~~~-~~~~i~~-~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
+.....++. .+.+.++ .++...++.....|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 66 LTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence 433333332 3356666 5778889899999999999999999999999999999999999987764
No 59
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.82 E-value=0.00031 Score=64.57 Aligned_cols=124 Identities=10% Similarity=0.045 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Q 018843 169 TITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALSCVFGLLISF 248 (350)
Q Consensus 169 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (350)
+...++++.|...++ -..|+.+...+...+.+...+.... +.... +.. +...|..++..|++......
T Consensus 13 ~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~-~~~~~~~~~~~g~~~~~~~~ 80 (302)
T TIGR00817 13 LNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCLLSWSS-GLPKR---------LKI-SSALLKLLLPVAIVHTIGHV 80 (302)
T ss_pred HHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHHHHHHh-CCCCC---------CCC-CHHHHHHHHHHHHHHHHHHH
Confidence 333445667877763 2456666666655554332222110 10000 011 23345666667777655555
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 249 FGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 249 ~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
..+.+++++++...++...+.|+++.++++++++|+++..+++|..++++|+.+..
T Consensus 81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 55699999999999999999999999999999999999999999999999998643
No 60
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.77 E-value=0.00094 Score=61.78 Aligned_cols=77 Identities=17% Similarity=0.219 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843 233 FFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
|+--+..+++=...+|....+.++++.+..++......+++.++|+++++++.++.|++|+.+.++|+.+.......
T Consensus 79 ~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~ 155 (334)
T PF06027_consen 79 WWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL 155 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence 44444457888899999999999999999999999999999999999999999999999999999999987766543
No 61
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.74 E-value=0.00026 Score=55.24 Aligned_cols=67 Identities=21% Similarity=0.290 Sum_probs=53.7
Q ss_pred HHHHHHHHHHH-HHhhccchh-HHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccc
Q 018843 241 VFGLLISFFGF-AARKAISAT-AFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV 307 (350)
Q Consensus 241 ~~~~~~~~~~~-~~i~~~sa~-~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~ 307 (350)
+.....++..+ .++|+.+.. ..++..-+..+.+++.|+++|||++|+.+++|+.++++|++..+...
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 44445554444 778888764 45677788999999999999999999999999999999999875443
No 62
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.66 E-value=0.0031 Score=51.52 Aligned_cols=122 Identities=19% Similarity=0.170 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHhc-----C-CchHHHHHHHHHHHHHHHHHHHHh-CcccCC----CC-------ChhhhhHHHHHHHHH
Q 018843 26 SSLLAVINKFAITK-----F-NYPGLLTALQYLTSALGVWVLGKF-GFLHHD----PF-------TFDTAKKFLPAAFVF 87 (350)
Q Consensus 26 s~~~~~~nK~~~~~-----~-~~p~~l~~~r~~~~~~~l~~~~~~-~~~~~~----~~-------~~~~~~~~~~~~~~~ 87 (350)
+..-.+..|..+++ . ..|..+..+....+.+++.+.... +..+.. .. +.+.+..++..+++.
T Consensus 12 ~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T PF03151_consen 12 SALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLA 91 (153)
T ss_pred HHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHH
Confidence 44444555666654 2 236677777777777777765442 222110 01 112233344455556
Q ss_pred HHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhh
Q 018843 88 YLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGY 148 (350)
Q Consensus 88 ~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~ 148 (350)
....+..+..++++++-+++++.....+.+.++++++++|++ +..++.|+.+.++|+.+-
T Consensus 92 ~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~-t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 92 FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPI-TPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcC-CHHHHHHHHHHHHHHhee
Confidence 666777889999999999999999999999999999999995 999999999999998764
No 63
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.62 E-value=0.057 Score=50.20 Aligned_cols=226 Identities=12% Similarity=0.018 Sum_probs=132.0
Q ss_pred CChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCC-------chhhHHHHHHHHH
Q 018843 72 FTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCP-------SRLTFLSLVIILG 143 (350)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~-------~~~~~~~~~l~~~ 143 (350)
.+.+.+.--+..|++......++..+.+|+.++...-+ ..++.+...++..++++| .+ ......++++.++
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~ge-w~~~~~t~~g~~~~~gv~lili 146 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGN-FDVLLATNGGRMTLLGVLVALI 146 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccc-cccccccchHHHHHHHHHHHHH
Confidence 34445555566777788888889999999998887655 577788888888888886 22 1335688888999
Q ss_pred hhhhhcc----cCc--------ccc-hHHHHHHHHHHHHHHHHHH-------HHHHHhhcCCCCcchhHHHHhH---HHH
Q 018843 144 GAVGYVA----TDS--------GFT-LTAYSWAFAYLVTITTEMV-------YIKHMVTNLGLNTWGFVLYNNL---LSL 200 (350)
Q Consensus 144 G~~l~~~----~~~--------~~~-~~G~~~~l~s~~~~a~~~v-------~~k~~~~~~~~~~~~~~~~~~~---~~~ 200 (350)
|+++... .|. +++ ..|+.+.+++.+.++.|.. ..+.. ...+.+++....-+.. .+.
T Consensus 147 Gi~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a-~~~g~~~~~~~lp~~~~~~~G~ 225 (345)
T PRK13499 147 GVAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAA-AALGVDPLYAALPSYVVIMGGG 225 (345)
T ss_pred HHHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhh-hhcCCCchHHHHHHHHHHHHHH
Confidence 9999765 332 122 3799999999999999993 33322 1124444333222222 111
Q ss_pred HHHHHH-HHH---h-ccHHHHHHHHHHhcCCCCc---hhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH----HHHHH
Q 018843 201 IISPFF-WFL---T-GEYGEVFAALVASAGSWFV---PDVFFAVALSCVFGLLISFFGFAARKAISATAFT----VTGVV 268 (350)
Q Consensus 201 ~~~~~~-~~~---~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s----~~~~l 268 (350)
.+.-+. ... . .+.....+. .. .. ..........|+.-...++....+-++.+..... +...+
T Consensus 226 ~~~n~~~~~~~~~k~~~~~~~~~~-----~~-~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~ 299 (345)
T PRK13499 226 AITNLGFCFIRLAKNKDLSLKADF-----SL-AKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSF 299 (345)
T ss_pred HHHHHHHHHHHHhhCCCcccchhc-----cc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccH
Confidence 111100 010 1 111000000 00 00 1223333444454444444444555555433222 33356
Q ss_pred HHHHHHHHHHHccCCCCc------hhhHHHHHHHhhhhhhhccc
Q 018843 269 NKFLTVVINVLIWDKHAS------PFGLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 269 ~~v~~~~ls~~~~~e~~t------~~~~~G~~li~~g~~~~~~~ 306 (350)
.-+++.+.|. +++|.=+ ...++|.++++.|..+....
T Consensus 300 ~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 300 YVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 6688888888 4888766 56789999999998876543
No 64
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.57 E-value=0.001 Score=60.74 Aligned_cols=131 Identities=12% Similarity=0.091 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHH
Q 018843 159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVAL 238 (350)
Q Consensus 159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
|+++.++++++|+...+..|+.. +.++.+.. -..++..+.........+. ....+..+..-..
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~~------------~~~~~~~~~~g~l 64 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVLP------------EFWALSIFLVGLL 64 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhCC------------cccccHHHHHHHH
Confidence 67889999999999999998764 33332222 1222332222222211110 0112345555566
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHH-HHHHHHHHHHHHccCCCCchhh----HHHHHHHhhhhhhhccc
Q 018843 239 SCVFGLLISFFGFAARKAISATAFTVTGV-VNKFLTVVINVLIWDKHASPFG----LICLLVTIAGGVLYQQS 306 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~i~~~sa~~~s~~~~-l~~v~~~~ls~~~~~e~~t~~~----~~G~~li~~g~~~~~~~ 306 (350)
.|++-...+++.+.++++.+....-...+ +.++...+++.+++||..+..+ ++|.+++++|+.+....
T Consensus 65 ~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~ 137 (290)
T TIGR00776 65 SGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRS 137 (290)
T ss_pred HHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEec
Confidence 66666667777789999999988877777 8888999999999999999999 99999999999887544
No 65
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.55 E-value=0.00063 Score=52.38 Aligned_cols=67 Identities=13% Similarity=0.168 Sum_probs=54.3
Q ss_pred HHHHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccc
Q 018843 241 VFGLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV 307 (350)
Q Consensus 241 ~~~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~ 307 (350)
+.....++..+ .++|+.+- ...++..-+..+.+++.|+++|||++|+.+++|+.+++.|++..+...
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 44455555444 77888876 456777889999999999999999999999999999999999986543
No 66
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.49 E-value=0.0013 Score=59.20 Aligned_cols=218 Identities=11% Similarity=0.159 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcc---c-c
Q 018843 81 LPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSG---F-T 156 (350)
Q Consensus 81 ~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~---~-~ 156 (350)
+..-+.+..+-..++.|..+.|.+..+-+.++..+...+++..++|||+ +....++..++++|..+.....+. . +
T Consensus 68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl-~~~g~lGc~l~v~Gst~iV~haP~e~~i~t 146 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKL-NLLGILGCVLCVVGSTTIVIHAPKEQEIES 146 (335)
T ss_pred HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHH-HHhhhhheeEEecccEEEEEecCccccccc
Confidence 3333345555677899999999999999999999999999999999997 899999999999999886543221 1 0
Q ss_pred ---------hHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHH-HHHHhcC
Q 018843 157 ---------LTAYS-WAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFA-ALVASAG 225 (350)
Q Consensus 157 ---------~~G~~-~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 225 (350)
-.+++ +...-.+...+-..+.| ++++. ..++.|..+++++- ....+..-......+ .++. ..
T Consensus 147 ~~el~~~~~~~~Fliy~~~iil~~~il~~~~~---p~~g~--tnilvyi~i~s~iG-S~tV~svKalg~aiklt~~g-~~ 219 (335)
T KOG2922|consen 147 VEEVWELATEPGFLVYVIIIILIVLILIFFYA---PRYGQ--TNILVYIGICSLIG-SLTVMSVKALGIAIKLTFSG-NN 219 (335)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHheeec---ccccc--cceeehhhHhhhhc-ceeeeeHHHHHHHHHHHhcC-Cc
Confidence 01211 11111111111111111 11121 12344555554320 000000000111111 1110 01
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH-HHHHHHHHHHHccCC--CCchh----hHHHHHHHhh
Q 018843 226 SWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVV-NKFLTVVINVLIWDK--HASPF----GLICLLVTIA 298 (350)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l-~~v~~~~ls~~~~~e--~~t~~----~~~G~~li~~ 298 (350)
+...+..|..++....+...-......+++..++..++...++ =..+++.-|.++|.| ..+.. ...|...++.
T Consensus 220 ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~ 299 (335)
T KOG2922|consen 220 QLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFL 299 (335)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhh
Confidence 1223344444444433333333344578887777666655554 345556667777763 44544 4568888899
Q ss_pred hhhhhccc
Q 018843 299 GGVLYQQS 306 (350)
Q Consensus 299 g~~~~~~~ 306 (350)
|+.+....
T Consensus 300 G~flL~~~ 307 (335)
T KOG2922|consen 300 GIFLLHRT 307 (335)
T ss_pred eeeEeeee
Confidence 98887533
No 67
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.44 E-value=0.0054 Score=55.41 Aligned_cols=141 Identities=16% Similarity=0.082 Sum_probs=89.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843 157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAV 236 (350)
Q Consensus 157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
..+....+...+.++......|...++ ..+......+.......+ ....... +..... +. ....+...
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~-------~~--~~~~~~~~ 73 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALL-LLPLLLL-EPRGLR-------PA--LRPWLLLL 73 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHH-HHHHHHh-hccccc-------cc--ccchHHHH
Confidence 356777777888888888888877663 233333333333333322 1111110 110000 00 11122333
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH-HccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843 237 ALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINV-LIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~-~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
+..++......+..+.+++++++...+......|++..++++ ++++|++++.++.|..+.+.|+.+.......
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~ 147 (292)
T COG0697 74 LLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG 147 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence 333333444445555889999999999999999999999997 6679999999999999999999988765544
No 68
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.42 E-value=0.0009 Score=59.41 Aligned_cols=79 Identities=20% Similarity=0.277 Sum_probs=68.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccC
Q 018843 231 DVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
........-+++..+-+...+.++++.+|.+..+....|.+++.++++++++++++..||++..+..+|+.+.......
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 3445556666777888888889999999999999999999999999999999999999999999999999987655444
No 69
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.33 E-value=0.0017 Score=49.13 Aligned_cols=64 Identities=23% Similarity=0.319 Sum_probs=54.2
Q ss_pred HHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843 243 GLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 243 ~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~ 306 (350)
+...+|... .++|+.+- +..++.+-+..+.+++.|+++|+|++|+.+++|+.++++|+...+..
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 444555444 77888876 56799999999999999999999999999999999999999987654
No 70
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.26 E-value=0.0025 Score=50.65 Aligned_cols=72 Identities=18% Similarity=0.097 Sum_probs=60.0
Q ss_pred HHHHHHH-HHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHH--HcccCCCchhhHHHHHHHHHhhhhhcccC
Q 018843 80 FLPAAFV-FYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTA--FRRQPCPSRLTFLSLVIILGGAVGYVATD 152 (350)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l--~~~e~~~~~~~~~~~~l~~~G~~l~~~~~ 152 (350)
++..++. +....++.+.+++..|.+.+.-+.+..++.+.+.++. +++|++ +..+++++++.++|+.++..++
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~l-s~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETF-SLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHHHHHhccCC
Confidence 3444444 4555778999999999999999999999989888885 899996 9999999999999999987543
No 71
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.22 E-value=0.019 Score=46.17 Aligned_cols=131 Identities=14% Similarity=0.137 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHHH
Q 018843 160 YSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVALS 239 (350)
Q Consensus 160 ~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
.++++.+-.+-++...+..++.++.+ +++...+.+...+.+......+..++. +..+ ..+.++ +..+ .
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~--------~~~~p~-w~~l-G 70 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLAS--------LSSVPW-WAYL-G 70 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccch--------hccCCh-HHhc-c
Confidence 45667777777788888877777443 577777777777766555555554443 2211 112223 3332 7
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHc--c---CCCCchhhHHHHHHHhhhhhh
Q 018843 240 CVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLI--W---DKHASPFGLICLLVTIAGGVL 302 (350)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~--~---~e~~t~~~~~G~~li~~g~~~ 302 (350)
|+++...-++....+++.++...........+...++=--+ | .+++++...+|..+++.|+.+
T Consensus 71 G~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 71 GLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 88888888888889999999999888888776665533332 3 378899999999999999863
No 72
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.20 E-value=0.0026 Score=48.84 Aligned_cols=64 Identities=22% Similarity=0.326 Sum_probs=53.2
Q ss_pred HHHHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 241 VFGLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 241 ~~~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
+.....+|... .++|+.+. ...++..-+..+.+++.|+++|+|++|+.+++|+.+++.|+...+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 34444554444 77888886 567899999999999999999999999999999999999998754
No 73
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.17 E-value=0.0034 Score=49.03 Aligned_cols=72 Identities=11% Similarity=0.138 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccchhHHHHHH-hHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843 79 KFLPAAFVFYLAIFTNTNLLRHANVDTFIVFR-SLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT 151 (350)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~ 151 (350)
......+++....++...+++++|.+.+..+- ...-+.+.+.++++++|++ +..+++++.+.++|++.....
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~-s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESL-SLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHhhcC
Confidence 34455556667788899999999999988774 6899999999999999996 999999999999999987654
No 74
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.15 E-value=0.0032 Score=48.03 Aligned_cols=64 Identities=22% Similarity=0.306 Sum_probs=53.3
Q ss_pred HHHHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 241 VFGLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 241 ~~~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
+.+...+|... .++|+.+. ...++..-+..+.+++.|+++|+|++|+.+++|+.+++.|+...+
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 33444454444 77888876 567999999999999999999999999999999999999998764
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.10 E-value=0.01 Score=44.92 Aligned_cols=70 Identities=16% Similarity=0.215 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843 81 LPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT 151 (350)
Q Consensus 81 ~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~ 151 (350)
...-+++....++...+++++|.+++-.+ .....+.+.+.++++++|+. +..+++++.+.++|++.....
T Consensus 34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l-~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESL-SLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcC-CHHHHHHHHHHHHHHHHhhhc
Confidence 33444455567778899999999987665 57788899999999999996 899999999999999987544
No 76
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.05 E-value=0.014 Score=44.44 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhhhhhhccchhHHHHHH-hHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc
Q 018843 82 PAAFVFYLAIFTNTNLLRHANVDTFIVFR-SLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA 150 (350)
Q Consensus 82 ~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~ 150 (350)
..-+++....++-..+++.+|.+++-.+- ....+.+.+.+++++||+. +..+++++.+.++|++....
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~-~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESA-SPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHhhhc
Confidence 34445566677888999999999977665 5889999999999999995 99999999999999998753
No 77
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.97 E-value=0.018 Score=44.39 Aligned_cols=68 Identities=10% Similarity=0.119 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHhhhhhhccchhHHHHHH-hHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843 83 AAFVFYLAIFTNTNLLRHANVDTFIVFR-SLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT 151 (350)
Q Consensus 83 ~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~ 151 (350)
.-+++....++...+++++|.+.+..+. ...-+.+.+.++++++|+. +..++.++.+.++|+++....
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~-~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRL-DLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHhcC
Confidence 3444555567788999999999988885 5789999999999999995 999999999999999998654
No 78
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.91 E-value=0.0003 Score=60.75 Aligned_cols=217 Identities=9% Similarity=0.070 Sum_probs=139.7
Q ss_pred CCCChhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhh----HHHHHHHHHh
Q 018843 70 DPFTFDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLT----FLSLVIILGG 144 (350)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~----~~~~~l~~~G 144 (350)
|..+.+.+---+.-+++.......++.+.++..+|.+.=+ .....+-+.+++++.++|= ++..+ ..++++.+.|
T Consensus 52 p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW-~t~~~~IlG~iAliliviG 130 (288)
T COG4975 52 PELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEW-TTPTQIILGFIALILIVIG 130 (288)
T ss_pred CccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEecc-CcchhHHHHHHHHHHHHHh
Confidence 3445555555556677788888889999999988876644 4567788899999999994 34333 3677788889
Q ss_pred hhhhcccCcc----c----chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHH
Q 018843 145 AVGYVATDSG----F----TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEV 216 (350)
Q Consensus 145 ~~l~~~~~~~----~----~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (350)
+.+.+.+|.+ . .-.|+...+.|.+.|..|.++.+.. +.+.++...-|+.-..+..........|. ..
T Consensus 131 ~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqAiGMv~~ali~~~~~~~~-~~ 205 (288)
T COG4975 131 IYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQAIGMVIGALILGFFKMEK-RF 205 (288)
T ss_pred heEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHHHHHHHHHHHHhhccccc-ch
Confidence 9988776531 1 1268888889999999999988755 33444443334333222222222222221 11
Q ss_pred HHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhH----HH
Q 018843 217 FAALVASAGSWFVPDVFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGL----IC 292 (350)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~----~G 292 (350)
.+ .. +.=...|+.-...+...+.+-++.+-.+.=..+-+.-+.+++-|.++++|+-|..++ +|
T Consensus 206 ~K------------~t-~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iG 272 (288)
T COG4975 206 NK------------YT-WLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIG 272 (288)
T ss_pred HH------------HH-HHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhh
Confidence 11 11 222233445455555555556666655555556677788889999999999988754 58
Q ss_pred HHHHhhhhhhhcc
Q 018843 293 LLVTIAGGVLYQQ 305 (350)
Q Consensus 293 ~~li~~g~~~~~~ 305 (350)
+++++.|..+...
T Consensus 273 iilivvgai~lg~ 285 (288)
T COG4975 273 IILIVVGAILLGI 285 (288)
T ss_pred HHHHHHHhhhhhe
Confidence 8888888776544
No 79
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.86 E-value=0.0095 Score=54.58 Aligned_cols=119 Identities=15% Similarity=0.107 Sum_probs=85.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHH
Q 018843 156 TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFA 235 (350)
Q Consensus 156 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (350)
...|..+++.++++.+...+++|+-.++.+.+..+. ++. ..++ +.++.+|..
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~-------------------~~~--~~~~-------l~~~~W~~G 56 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA-------------------GSG--GRSY-------LRRPLWWIG 56 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------------cch--hhHH-------HhhHHHHHH
Confidence 457999999999999999999998665432211110 000 0000 113345555
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843 236 VALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~ 306 (350)
++.. +.+...++ .++...+++..+..+.+.-++..+++-.+++|+++...+.|..+++.|..+....
T Consensus 57 ~~~~-~~g~~~~~---~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~ 123 (300)
T PF05653_consen 57 LLLM-VLGEILNF---VALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF 123 (300)
T ss_pred HHHH-hcchHHHH---HHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence 5433 34444443 4678899999999999999999999999999999999999999999999876543
No 80
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.84 E-value=0.035 Score=42.59 Aligned_cols=67 Identities=13% Similarity=0.092 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhhhhhhccchhHHHHHH-hHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhc
Q 018843 82 PAAFVFYLAIFTNTNLLRHANVDTFIVFR-SLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV 149 (350)
Q Consensus 82 ~~~~~~~~~~~~~~~al~~~s~s~~~il~-~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~ 149 (350)
..-+++....++...+++++|.+++-.+- ...-+.+.+.+++++||+. +..++.++.+.+.|++...
T Consensus 40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~-~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRL-NRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHHHHHhc
Confidence 33444555677888999999999977664 5788999999999999995 9999999999999998753
No 81
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.47 E-value=0.061 Score=50.01 Aligned_cols=138 Identities=12% Similarity=0.176 Sum_probs=94.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHH-HhHHHHHHHHHHH--HHhccHHHHHHHHHHhcCCCCchhHH
Q 018843 157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLY-NNLLSLIISPFFW--FLTGEYGEVFAALVASAGSWFVPDVF 233 (350)
Q Consensus 157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
..|+++.+++++|++.+.+-.|+ .| .-+||...- ..+++-++.|... +..++..+..+. .++..+
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k---~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~--------~~~~~~ 73 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VK---KWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSS--------FSGSTL 73 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cC---CCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh--------cCHHHH
Confidence 47999999999999999998887 33 234554421 1223334444222 122233332221 156677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHccCCCC---c----hhhHHHHHHHhhhhhhhcc
Q 018843 234 FAVALSCVFGLLISFFGFAARKAISAT-AFTVTGVVNKFLTVVINVLIWDKHA---S----PFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~sa~-~~s~~~~l~~v~~~~ls~~~~~e~~---t----~~~~~G~~li~~g~~~~~~ 305 (350)
......|++-...+...+..+|+.+-+ .+.+..-+..+..++++.+++||=. + ..-++|.+++++|+.+..+
T Consensus 74 ~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 74 LPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 788888888888888888888888864 5566667888999999999998533 2 2367799999999999887
Q ss_pred c
Q 018843 306 S 306 (350)
Q Consensus 306 ~ 306 (350)
.
T Consensus 154 A 154 (345)
T PRK13499 154 A 154 (345)
T ss_pred h
Confidence 4
No 82
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.46 E-value=0.0022 Score=56.24 Aligned_cols=68 Identities=16% Similarity=0.171 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccc
Q 018843 240 CVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSV 307 (350)
Q Consensus 240 ~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~ 307 (350)
|+.|+...+..|++.++.+-.-+.+.....|+++++++|.+++|+.|.+..+|..+.+.|+.+..+..
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 45555555556667888888888888899999999999999999999999999999999999977543
No 83
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.37 E-value=0.014 Score=43.63 Aligned_cols=54 Identities=15% Similarity=0.138 Sum_probs=30.9
Q ss_pred HHHHHHHHH-HHhhccchhHH-HHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHH
Q 018843 243 GLLISFFGF-AARKAISATAF-TVTGVVNKFLTVVINVLIWDKHASPFGLICLLVT 296 (350)
Q Consensus 243 ~~~~~~~~~-~~i~~~sa~~~-s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li 296 (350)
....++..+ .++|+.+.... .+..-+..+..++.|.++|||++|+.+++|+.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 444554444 78899887655 7778899999999999999999999999999875
No 84
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.25 E-value=0.12 Score=46.17 Aligned_cols=71 Identities=13% Similarity=0.211 Sum_probs=54.3
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHH----HHHHHHHhhh
Q 018843 74 FDTAKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFL----SLVIILGGAV 146 (350)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~----~~~l~~~G~~ 146 (350)
++.++. +..|+++.....++..+.+....++.-.+.++.++...+.+.+++||+ .+++++. ++++.++|.+
T Consensus 193 k~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~-Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 193 KKSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEK-KTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred cchHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEec-CchhhHHHHHHHHHHHHHhhh
Confidence 344555 445777777777788999999999999999999999999999999998 4777553 4444444443
No 85
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.24 E-value=0.024 Score=50.36 Aligned_cols=130 Identities=12% Similarity=0.118 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHH--hccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843 159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFL--TGEYGEVFAALVASAGSWFVPDVFFAV 236 (350)
Q Consensus 159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
|++.+++|+++++...+=.|+.-. + +. +++|...+..++...... ..+ .+.++...
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~--g-Dg---~~fQw~~~~~i~~~g~~v~~~~~----------------~p~f~p~a 58 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT--G-DG---FFFQWVMCSGIFLVGLVVNLILG----------------FPPFYPWA 58 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC--C-Cc---HHHHHHHHHHHHHHHHHHHHhcC----------------CCcceeHH
Confidence 566778888888888777765432 1 23 444555543333333221 111 11233333
Q ss_pred HHHHHHHHHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHH-ccCCC---C--chhhHHHHHHHhhhhhhhcccccC
Q 018843 237 ALSCVFGLLISFFGFAARKAISA-TAFTVTGVVNKFLTVVINVL-IWDKH---A--SPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~i~~~sa-~~~s~~~~l~~v~~~~ls~~-~~~e~---~--t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
.+.|.+-...+.+..-++|..+- .-..+.+..+-+.+...|-+ +||+. + .+.+++|++++++|..+|...|.+
T Consensus 59 mlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 59 MLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred HhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence 34445544455555555666553 33445555566666665543 45532 2 567999999999999999877665
Q ss_pred C
Q 018843 310 P 310 (350)
Q Consensus 310 ~ 310 (350)
.
T Consensus 139 ~ 139 (254)
T PF07857_consen 139 E 139 (254)
T ss_pred C
Confidence 4
No 86
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.77 E-value=0.11 Score=45.56 Aligned_cols=55 Identities=24% Similarity=0.347 Sum_probs=50.3
Q ss_pred HHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843 92 FTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 92 ~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l 147 (350)
.+...++++.|...+.++.++.|.+-.+.++++++|. ++..+|.++...+.+.+=
T Consensus 225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~-ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGET-LTLIQWLAIAAVIAASAG 279 (292)
T ss_pred HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHhc
Confidence 4588999999999999999999999999999999999 599999999988887663
No 87
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.76 E-value=0.77 Score=36.89 Aligned_cols=126 Identities=10% Similarity=0.027 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcc-cCCCCChhhhhHHHHHHHHHHHHHHHhhhhh
Q 018843 20 VGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFL-HHDPFTFDTAKKFLPAAFVFYLAIFTNTNLL 98 (350)
Q Consensus 20 ~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 98 (350)
+...........+|-.+-++...|..-++.-+..+.+.+.++....+. +.+.....++. .+..|++......+.....
T Consensus 7 ~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~v 85 (138)
T PF04657_consen 7 LLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILV 85 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHh
Confidence 333444444455565555455558887777788887777776554433 22222222233 3346777777788888888
Q ss_pred hccchhHHHHHH-hHHHHHHHHHHHH----HcccCCCchhhHHHHHHHHHhhhh
Q 018843 99 RHANVDTFIVFR-SLTPLLVALADTA----FRRQPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 99 ~~~s~s~~~il~-~~~pi~v~ll~~l----~~~e~~~~~~~~~~~~l~~~G~~l 147 (350)
..+.++..+.+. .-+.+...+++.+ .-|+++ +..+..++.++++|+.+
T Consensus 86 p~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~-~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 86 PRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPF-SLRRILGLALMIAGVIL 138 (138)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCC-CHHHHHHHHHHHHHHhC
Confidence 888888777664 5666777777775 344564 78899999999999864
No 88
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.68 E-value=0.11 Score=38.74 Aligned_cols=55 Identities=16% Similarity=0.155 Sum_probs=32.9
Q ss_pred HHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhHHHHHHH
Q 018843 86 VFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTFLSLVII 141 (350)
Q Consensus 86 ~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~ 141 (350)
++....++...+++++|.+.+-.+ .....+.+.+.+..+++|++ +..++.++.+.
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~-s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESL-SLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH---------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCC-CHHHHhheeeC
Confidence 556667889999999999998655 56999999999999999996 89999988763
No 89
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.58 E-value=0.31 Score=42.45 Aligned_cols=67 Identities=13% Similarity=0.074 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843 80 FLPAAFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 80 ~~~~~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l 147 (350)
.+...++......+..+.++|.+..+..+...+.++++.+++.++++|+ ++..++.+..+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~-ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAK-ISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccHHHHHHHHHHHeeeEe
Confidence 3344444555556678889999999999999999999999999999999 599999999999988653
No 90
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=95.55 E-value=0.03 Score=51.61 Aligned_cols=78 Identities=17% Similarity=0.176 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843 233 FFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
-..-++.|.+-++.+|....++++++....++++...-+++..++.++.+|++|+...++..+.+.|+++.+....++
T Consensus 159 ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 159 AKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 345556677788888888899999999999999999999999999999999999999999999999999987655443
No 91
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.36 E-value=1 Score=41.52 Aligned_cols=71 Identities=23% Similarity=0.328 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhc
Q 018843 234 FAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~ 304 (350)
+-+..-+.+...-|...+.+..+.+|.+.++...+|.+.+.++++++++++++..||...++...|+.+..
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 44444445666666666688999999999999999999999999999999999999999999999999866
No 92
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.19 E-value=0.94 Score=36.74 Aligned_cols=136 Identities=10% Similarity=0.107 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHH
Q 018843 158 TAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVA 237 (350)
Q Consensus 158 ~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
...+..+.+-.+-....-...++.+..+ ++..-...+...++..+.......+..+... . .....|+..
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a-~--------~~~~pwW~~- 73 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLA-A--------VASAPWWAW- 73 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-h--------ccCCchHHH-
Confidence 4456667777777777777777777433 4555555566665544444433332222211 1 122233333
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHc--cC---CCCchhhHHHHHHHhhhhhhhc
Q 018843 238 LSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLI--WD---KHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 238 ~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~--~~---e~~t~~~~~G~~li~~g~~~~~ 304 (350)
..|+++..+-+.......+.++.+.............++--.| +| .++++..++|+.++++|+++..
T Consensus 74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 3347777777777778889998877766666665555443333 22 6889999999999999955443
No 93
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.99 E-value=0.17 Score=38.92 Aligned_cols=69 Identities=23% Similarity=0.224 Sum_probs=53.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843 77 AKKFLPAAFVFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l 147 (350)
++.+.|..+ +..+...++..+...+.|.+.-+ ++++-+++++.++++.+|. .+++++.++.+.++|+.+
T Consensus 42 ~~y~ipf~l-Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~-~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 42 PKYIIPFLL-NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEV-ISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcc-cchhHHHHHHHHHcCeee
Confidence 445555544 44444557788889999988877 5899999999998887776 478899999999999876
No 94
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=93.83 E-value=0.045 Score=47.66 Aligned_cols=132 Identities=14% Similarity=0.137 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHHHHH
Q 018843 159 AYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFAVAL 238 (350)
Q Consensus 159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
+++.+++=++.|+..-....+. +-+|.+++.=+++-+++.....+++..+. .+...+..-..
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~----GG~p~qQ~lGtT~GALifaiiv~~~~~p~--------------~T~~~~iv~~i 64 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKF----GGKPYQQTLGTTLGALIFAIIVFLFVSPE--------------LTLTIFIVGFI 64 (288)
T ss_pred hHHHHHHHHHHhcccceeeeec----CCChhHhhhhccHHHHHHHHHHheeecCc--------------cchhhHHHHHH
Confidence 4566677777777665544433 44566555434444433222222221111 14456677777
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHHHccCCCCchhhHH----HHHHHhhhhhhhccccc
Q 018843 239 SCVFGLLISFFGFAARKAISATAFTVT-GVVNKFLTVVINVLIWDKHASPFGLI----CLLVTIAGGVLYQQSVT 308 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~i~~~sa~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~----G~~li~~g~~~~~~~~~ 308 (350)
+|++-...+...+.+++..+.+..... +-++.+-+.++|++.|||=.+..+.+ ..++++.|..+-.+.++
T Consensus 65 sG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 65 SGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 888888888888888888777655543 45677888899999999988887654 56777888877665554
No 95
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=92.39 E-value=1.5 Score=37.84 Aligned_cols=128 Identities=15% Similarity=0.098 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--cCCchHHHHHHHHHHHHHHHHHHHHhCcccCC-----CCChhhhhHHHHHHHHHHHH
Q 018843 18 LVVGYALCSSLLAVINKFAIT--KFNYPGLLTALQYLTSALGVWVLGKFGFLHHD-----PFTFDTAKKFLPAAFVFYLA 90 (350)
Q Consensus 18 ~~~~~~~~s~~~~~~nK~~~~--~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 90 (350)
++...+..+...++..|.-.. +|. -+.-.++.-+.+..++..+..+-.-+.+ .++.+....+++-|++.++.
T Consensus 159 Wm~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgi 237 (309)
T COG5070 159 WMFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGI 237 (309)
T ss_pred EEehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhh
Confidence 445567777777777776664 332 3445666667777777666543222211 12233333455566666777
Q ss_pred HHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843 91 IFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 91 ~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l 147 (350)
.++.-|.++-++.+++.++..++-....+.+.+++.++. ++..+.++.++....++
T Consensus 238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~-nf~si~sillGflsg~i 293 (309)
T COG5070 238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPV-NFLSIFSILLGFLSGAI 293 (309)
T ss_pred hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCch-hHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999999985 77777776666554443
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=92.07 E-value=3.8 Score=37.11 Aligned_cols=135 Identities=14% Similarity=0.013 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHHHHHHHHHhCcccCC-----CCChhhhhHHHHHHH
Q 018843 12 YYTTSGLVVGYALCSSLLAVINKFAITKFNY-PGLLTALQYLTSALGVWVLGKFGFLHHD-----PFTFDTAKKFLPAAF 85 (350)
Q Consensus 12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~~~~~-p~~l~~~r~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 85 (350)
.....++...|..+=-..+...+.++.++.. +..+.+.--+...+...........-.+ +..++-++|++..+.
T Consensus 170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~ 249 (327)
T KOG1581|consen 170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST 249 (327)
T ss_pred chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence 3334445555555443444455556654432 3333333223333333322221111111 234567899999999
Q ss_pred HHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843 86 VFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 86 ~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l 147 (350)
+...+..+-+.-++.-..=+.+++..+.=++...++.+++++++ +..+|.++.+.+.|..+
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~-s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPL-SSEQWLGVLIVFGGIFL 310 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCcc-chhhccCeeeehHHHHH
Confidence 99999777666666544455566677788899999999999997 89999999998888876
No 97
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.42 E-value=4.7 Score=37.30 Aligned_cols=140 Identities=12% Similarity=0.132 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHH-HHhHHHHHHHHHHHH--HhccHHHHHHHHHHhcCCCCchhHH
Q 018843 157 LTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVL-YNNLLSLIISPFFWF--LTGEYGEVFAALVASAGSWFVPDVF 233 (350)
Q Consensus 157 ~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (350)
..|+++..++.++.+.+.+=.||.. .=.||... .+.+++-++.|...- ..+|+.+.... . +...+
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk----~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~-------~-~~~~l 73 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVK----GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSA-------T-PASTL 73 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcC----CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHh-------C-ChhHH
Confidence 4799999999999999998887762 23466544 355667666665543 33455555432 1 22233
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhhccch-hHHHHHHHHHHHHHHHHHHHccC-------CCCchhhHHHHHHHhhhhhhhc
Q 018843 234 FAVALSCVFGLLISFFGF-AARKAISA-TAFTVTGVVNKFLTVVINVLIWD-------KHASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~-~~i~~~sa-~~~s~~~~l~~v~~~~ls~~~~~-------e~~t~~~~~G~~li~~g~~~~~ 304 (350)
....+.|++--..+. .| ..+|+.+- ...++..-+..++.+++--++-+ ++-....++|.++.++|+.+..
T Consensus 74 ~~~~l~G~lWGIGgl-tfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g 152 (344)
T PF06379_consen 74 FWTFLFGVLWGIGGL-TFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICG 152 (344)
T ss_pred HHHHHHHHHHhcchh-hHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHh
Confidence 333334343222222 22 45666664 34455555555666665555432 2223457889999999999987
Q ss_pred ccccC
Q 018843 305 QSVTG 309 (350)
Q Consensus 305 ~~~~~ 309 (350)
+.-..
T Consensus 153 ~AG~~ 157 (344)
T PF06379_consen 153 KAGSM 157 (344)
T ss_pred HHHHh
Confidence 66433
No 98
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=90.76 E-value=1 Score=41.39 Aligned_cols=132 Identities=14% Similarity=0.077 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--c--CCchHHHHHHHHHHHHHHHH-HHHHhCcccC------CCCChhhhhHHHHH
Q 018843 15 TSGLVVGYALCSSLLAVINKFAIT--K--FNYPGLLTALQYLTSALGVW-VLGKFGFLHH------DPFTFDTAKKFLPA 83 (350)
Q Consensus 15 ~~~~~~~~~~~s~~~~~~nK~~~~--~--~~~p~~l~~~r~~~~~~~l~-~~~~~~~~~~------~~~~~~~~~~~~~~ 83 (350)
....+....+....-.+..|.++. + .+ +..+..++.-++...+. +......... .+.+.+ ...+...
T Consensus 164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 241 (316)
T KOG1441|consen 164 GFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLN 241 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHH
Confidence 334444444445566667777774 2 33 66677777777777776 5443221111 122222 2233344
Q ss_pred HHHHHHHHHHhhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhc
Q 018843 84 AFVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV 149 (350)
Q Consensus 84 ~~~~~~~~~~~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~ 149 (350)
+++........+..+..+++-++++.....=+++...+++++++++ +....+|..+.++|+.+-.
T Consensus 242 sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pv-t~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 242 SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPV-TFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCC-chhhHHHHHHHHHHHHHHH
Confidence 4444444556777788899999999988888889999999999986 8999999999999998854
No 99
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.76 E-value=7.8 Score=31.47 Aligned_cols=130 Identities=14% Similarity=0.064 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCcccCCCCC--hh-hhhHHHHHHHHHHHHHHH
Q 018843 17 GLVVGYALCSSLLAVINKFAITKFNYPGLLTALQYLTSALGVWVLGKFGFLHHDPFT--FD-TAKKFLPAAFVFYLAIFT 93 (350)
Q Consensus 17 ~~~~~~~~~s~~~~~~nK~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~ 93 (350)
+..+....+....+-+|-.+-+.-+.|..-.+.-+..+.+++..+... +.++++.. ++ .|..|+. |++.......
T Consensus 8 l~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~~~~~pwW~~~G-G~lGa~~vt~ 85 (150)
T COG3238 8 LFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLI-KQGHPGLAAVASAPWWAWIG-GLLGAIFVTS 85 (150)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhhccCCchHHHHc-cchhhhhhhh
Confidence 445555566666677777776666678888888888877777766555 33333323 33 3333333 4444444444
Q ss_pred hhhhhhccchhHHHH-HHhHHHHHHHHHHHHHcc----cCCCchhhHHHHHHHHHhhhhhc
Q 018843 94 NTNLLRHANVDTFIV-FRSLTPLLVALADTAFRR----QPCPSRLTFLSLVIILGGAVGYV 149 (350)
Q Consensus 94 ~~~al~~~s~s~~~i-l~~~~pi~v~ll~~l~~~----e~~~~~~~~~~~~l~~~G~~l~~ 149 (350)
+......+.+++.+. +-..+-+.-++++.+=.. ++ ++..++.+++++++|+.+..
T Consensus 86 s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~-~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 86 SILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRP-LNLPRILGILLVLAGILLAR 145 (150)
T ss_pred hHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCC-CCHHHHHHHHHHHHHHHHhc
Confidence 555555555555444 345555666665554333 34 58889999999999965554
No 100
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.18 E-value=0.61 Score=40.48 Aligned_cols=67 Identities=15% Similarity=0.136 Sum_probs=55.9
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843 244 LLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 244 ~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
.....+...+++..+=-+.-+--.-||+...++|+.+.+...+|.......+|++|+.++.+.+.|.
T Consensus 96 LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv 162 (337)
T KOG1580|consen 96 LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV 162 (337)
T ss_pred HHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence 3334445578888887777777788999999999999999999999999999999999998876554
No 101
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.12 E-value=0.22 Score=45.26 Aligned_cols=123 Identities=13% Similarity=0.216 Sum_probs=84.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHHHHHHHHHhcCCCCchhHHHH
Q 018843 156 TLTAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGEVFAALVASAGSWFVPDVFFA 235 (350)
Q Consensus 156 ~~~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (350)
+..|..+.+.+.+..+...++.|+-.++.+.... -.+|.+.. + .....|+.
T Consensus 19 ~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~-------------------ra~~gg~~--y--------l~~~~Ww~ 69 (335)
T KOG2922|consen 19 NIIGLVLAISSSIFIGSSFILKKKGLKRAGASGL-------------------RAGEGGYG--Y--------LKEPLWWA 69 (335)
T ss_pred ceeeeeehhhccEEEeeehhhhHHHHHHHhhhcc-------------------cccCCCcc--h--------hhhHHHHH
Confidence 4568888888888888888888876553221110 00111000 0 01123444
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843 236 VALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
-.+.-..|=..+|+. ....+++..+..+.+.-+.+.+++..+++|.+++...+|+++.++|..+......++
T Consensus 70 G~ltm~vGei~NFaA---YaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 70 GMLTMIVGEIANFAA---YAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred HHHHHHHHhHhhHHH---HhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 444446666666665 467788999999999999999999999999999999999999999999876554443
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=88.93 E-value=7.7 Score=35.44 Aligned_cols=135 Identities=19% Similarity=0.186 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCC-cchhHHHHhHHHHHHHHHHHHHh-ccHHHHHHHHHHhcCCCCchhHHHHH
Q 018843 159 AYSWAFAYLVTITTEMVYIKHMVTNLGLN-TWGFVLYNNLLSLIISPFFWFLT-GEYGEVFAALVASAGSWFVPDVFFAV 236 (350)
Q Consensus 159 G~~~~l~s~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (350)
...-++..+++..+..+..|....+.+.+ ...++.+|.+.+++...+.-... -+.++. +|.....|+-+
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l---------~~~~~kk~~P~ 83 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL---------DLRTAKKWFPV 83 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc---------ChHHHHHHccH
Confidence 34555666666667777778777765554 33445578887654333332210 011111 12122223211
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcc
Q 018843 237 ALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQ 305 (350)
Q Consensus 237 ~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~ 305 (350)
.++-.+.-++....+|+.+-....+.....++...+....+++..++...+......++|...+..
T Consensus 84 ---~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~ 149 (314)
T KOG1444|consen 84 ---SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAF 149 (314)
T ss_pred ---HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcc
Confidence 112222334445678999999999999999999999999999999999999999999999887653
No 103
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=88.22 E-value=1.3 Score=34.14 Aligned_cols=51 Identities=12% Similarity=0.049 Sum_probs=41.3
Q ss_pred HHhhccchhHHHHH-HHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhh
Q 018843 252 AARKAISATAFTVT-GVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVL 302 (350)
Q Consensus 252 ~~i~~~sa~~~s~~-~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~ 302 (350)
..+++.+-+..... +.+.-+++++.++++.+|..+...++|+.+++.|+.+
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34666666555555 5788899999999999999999999999999999875
No 104
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=87.19 E-value=0.68 Score=39.10 Aligned_cols=68 Identities=15% Similarity=0.182 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCC
Q 018843 243 GLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 243 ~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
-+..+|....++++.+|+.++-...-+..+.-+++++.++++.....++..++.+.|+.+..+.....
T Consensus 63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~ 130 (290)
T KOG4314|consen 63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH 130 (290)
T ss_pred EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence 34567766789999999999999999999999999999999999999999999999999888765543
No 105
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=82.05 E-value=28 Score=31.40 Aligned_cols=135 Identities=14% Similarity=0.168 Sum_probs=86.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCchHHHHHHHHHHHHHHHHHHHH-hCcc-cCCCCC------hhhhhHHH-
Q 018843 12 YYTTSGLVVGYALCSSLLAVINKFAIT-KFNYPGLLTALQYLTSALGVWVLGK-FGFL-HHDPFT------FDTAKKFL- 81 (350)
Q Consensus 12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~-~~~~p~~l~~~r~~~~~~~l~~~~~-~~~~-~~~~~~------~~~~~~~~- 81 (350)
-..-.+.++...+..+.++.=.|++.. +.+ |.....++-+.+.+++..+.. .... ..++++ ++++.+.+
T Consensus 175 itGdllIiiaqiivaiQ~v~Eek~l~~~nV~-pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~ 253 (372)
T KOG3912|consen 175 ITGDLLIIIAQIIVAIQMVCEEKQLKKSNVA-PLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA 253 (372)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhccCC-HHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence 444556677777878888877776554 333 888899988888555544322 1111 111111 22333321
Q ss_pred --------HHHHH-HHHHHHH-hhhh---hhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhh
Q 018843 82 --------PAAFV-FYLAIFT-NTNL---LRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGY 148 (350)
Q Consensus 82 --------~~~~~-~~~~~~~-~~~a---l~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~ 148 (350)
..++. ....+.+ ++.+ -++.|+++-.++.++...++=+++.....|++ ...+..+.++...|+.+-
T Consensus 254 ~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f-~llqilGFliLi~Gi~lY 332 (372)
T KOG3912|consen 254 ALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYF-HLLQILGFLILIMGIILY 332 (372)
T ss_pred HhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 11111 2223333 3333 45788899999999998888899999999996 899999999999999874
No 106
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=77.80 E-value=1.2 Score=39.37 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccccc
Q 018843 239 SCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVT 308 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~ 308 (350)
.+++-.-.||....+.++++-+......+-..+...+++|++++.+..+.++.|.++.+.|+.....+.-
T Consensus 84 la~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV 153 (336)
T KOG2766|consen 84 LAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDV 153 (336)
T ss_pred eeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeee
Confidence 3444555666666788999999999999999999999999999999999999999999999987665543
No 107
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=75.30 E-value=0.92 Score=40.38 Aligned_cols=97 Identities=11% Similarity=0.167 Sum_probs=0.0
Q ss_pred hhhhccchhHHHHHHhHHHHHHHHHHHH-HcccCCCchhhHHHHHHHHHhhhhhcccCc--ccchHHHHHHHHHHHHHHH
Q 018843 96 NLLRHANVDTFIVFRSLTPLLVALADTA-FRRQPCPSRLTFLSLVIILGGAVGYVATDS--GFTLTAYSWAFAYLVTITT 172 (350)
Q Consensus 96 ~al~~~s~s~~~il~~~~pi~v~ll~~l-~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~--~~~~~G~~~~l~s~~~~a~ 172 (350)
.-++-.+-+-.+++.+...+.+.++-.+ ++|+|..-..-.++++++.+-..++..... +.-..|+++.+...+..-.
T Consensus 42 iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~ 121 (381)
T PF05297_consen 42 IIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALG 121 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 3344455556667777766655554443 445554222223333333333333332221 1113565544443333222
Q ss_pred HHHHHHHHhhcCCCCcchhHH
Q 018843 173 EMVYIKHMVTNLGLNTWGFVL 193 (350)
Q Consensus 173 ~~v~~k~~~~~~~~~~~~~~~ 193 (350)
-.+|. .++++.+-+-|++..
T Consensus 122 vW~Ym-~lLr~~GAs~WtiLa 141 (381)
T PF05297_consen 122 VWFYM-WLLRELGASFWTILA 141 (381)
T ss_dssp ---------------------
T ss_pred HHHHH-HHHHHhhhHHHHHHH
Confidence 22233 366767778887654
No 108
>PRK02237 hypothetical protein; Provisional
Probab=70.71 E-value=12 Score=28.42 Aligned_cols=47 Identities=9% Similarity=0.058 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843 260 TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 260 ~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~ 306 (350)
-..+.++-+=.+.+.++++.+-+++|+.+.++|..+.++|+.+..+.
T Consensus 60 RvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 60 RVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 34566666777888899999999999999999999999999876543
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=66.44 E-value=14 Score=27.92 Aligned_cols=46 Identities=11% Similarity=0.124 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843 261 AFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 261 ~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~ 306 (350)
..+.++-+=.+.+.++++.+=+++|+.+.++|..+.+.|+.+..+.
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 4455666677888999999999999999999999999999887654
No 110
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=63.11 E-value=8.1 Score=29.18 Aligned_cols=29 Identities=10% Similarity=0.011 Sum_probs=25.2
Q ss_pred HHHHHHccCCCCchhhHHHHHHHhhhhhh
Q 018843 274 VVINVLIWDKHASPFGLICLLVTIAGGVL 302 (350)
Q Consensus 274 ~~ls~~~~~e~~t~~~~~G~~li~~g~~~ 302 (350)
+.+++++++|+++|.+..|..+++.|++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 45788899999999999999999888764
No 111
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=59.32 E-value=1.2e+02 Score=29.76 Aligned_cols=25 Identities=16% Similarity=0.056 Sum_probs=20.1
Q ss_pred CchhhHHHHHHHhhhhhhhcccccC
Q 018843 285 ASPFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 285 ~t~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
++..|++.+.++++|++++.+.+++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~~ 278 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPKG 278 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhcc
Confidence 6888999999999998877655443
No 112
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=57.43 E-value=4.3 Score=36.79 Aligned_cols=70 Identities=13% Similarity=-0.050 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHc---cCCCCc--hhhHHHHHHHhhhhhhhc
Q 018843 232 VFFAVALSCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLI---WDKHAS--PFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~---~~e~~t--~~~~~G~~li~~g~~~~~ 304 (350)
.+......|++-.+.+..+.+++...+-+..-++ ..=+++++|..+ .+.+.+ ..-+.|..++++++++-.
T Consensus 71 sv~~A~aGGvvfnlgNillq~aia~aGmSVafpv---g~glalVlGv~~NYfld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 71 SVLFAMAGGVVFNLGNILLQAAIAFAGMSVAFPV---GIGLALVLGVTLNYFLDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred HHHHHHHhhHhhhhHHHHHHHHHHHhcceeeeee---ecceEEEEeeeeeeeccCCCCCceEEEccHHHHHHHHHHHH
Confidence 3444555555555555555555544443332221 122233344433 244444 355668888888887644
No 113
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=55.30 E-value=18 Score=28.77 Aligned_cols=31 Identities=19% Similarity=0.286 Sum_probs=14.8
Q ss_pred HHHHHHHHccCCCCchh-hHHHHHHHhhhhhhhc
Q 018843 272 LTVVINVLIWDKHASPF-GLICLLVTIAGGVLYQ 304 (350)
Q Consensus 272 ~~~~ls~~~~~e~~t~~-~~~G~~li~~g~~~~~ 304 (350)
+-+++|.+.+++ ++. .++|..+...|++...
T Consensus 73 fyif~G~l~~~~--~~~~~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 73 FYIFLGTLCLGQ--SILSIIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHH
Confidence 333444444444 222 3446666666665433
No 114
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=53.61 E-value=20 Score=27.06 Aligned_cols=61 Identities=18% Similarity=0.075 Sum_probs=46.1
Q ss_pred HHHHHHHHhhhhhhccchhHHHHH-HhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843 86 VFYLAIFTNTNLLRHANVDTFIVF-RSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 86 ~~~~~~~~~~~al~~~s~s~~~il-~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l 147 (350)
+.-....++++-++..+.+.+.=+ .+++-.++.+.+..+..| .+.++.+.+..+.++|+.+
T Consensus 61 lNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~-~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 61 LNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEE-TQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccc-cccceeehhhhHHhhhhhh
Confidence 344445667778888888876644 567888899999888544 5788888999999999876
No 115
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=50.63 E-value=38 Score=26.51 Aligned_cols=53 Identities=21% Similarity=0.234 Sum_probs=35.6
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHH
Q 018843 8 STKQYYTTSGLVVGYALCSSLLAVINKFAITKF-NYPGLLTALQYLTSALGVWV 60 (350)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~s~~~~~~nK~~~~~~-~~p~~l~~~r~~~~~~~l~~ 60 (350)
..|+...+...++.+.++++...++-|-++..+ +||+++.-.-...-..+.+.
T Consensus 51 ~~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffa 104 (130)
T PF08627_consen 51 YSKENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFA 104 (130)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHH
Confidence 456677787888888888888888888777654 57776655444333344443
No 116
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=49.86 E-value=8.2 Score=30.19 Aligned_cols=10 Identities=10% Similarity=-0.157 Sum_probs=3.4
Q ss_pred hhcccccCCC
Q 018843 302 LYQQSVTGPG 311 (350)
Q Consensus 302 ~~~~~~~~~~ 311 (350)
.|..+|++++
T Consensus 85 ~y~irR~~Kk 94 (122)
T PF01102_consen 85 SYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHS--
T ss_pred HHHHHHHhcc
Confidence 3444444433
No 117
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=49.77 E-value=1.6e+02 Score=25.05 Aligned_cols=21 Identities=29% Similarity=0.577 Sum_probs=13.2
Q ss_pred HHHHccCCCCchhhHHHHHHH
Q 018843 276 INVLIWDKHASPFGLICLLVT 296 (350)
Q Consensus 276 ls~~~~~e~~t~~~~~G~~li 296 (350)
+|..++++..=+...+|..+.
T Consensus 135 iG~~L~t~y~l~fe~~silLL 155 (198)
T PRK06638 135 IGILLFTDYLLPFELASVLLL 155 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 466666666666666666653
No 118
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=48.45 E-value=32 Score=26.10 Aligned_cols=45 Identities=13% Similarity=0.147 Sum_probs=35.7
Q ss_pred HHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhccc
Q 018843 106 FIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVAT 151 (350)
Q Consensus 106 ~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~ 151 (350)
+..-.....+...+..+.+-++| |.+.++.+..++++|+.++...
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~-Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVR-PDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcC-CChHHHHhHHHHHHhHHheEec
Confidence 33444556677788888998998 8999999999999999987543
No 119
>PF15471 TMEM171: Transmembrane protein family 171
Probab=44.77 E-value=27 Score=31.11 Aligned_cols=26 Identities=8% Similarity=0.192 Sum_probs=20.8
Q ss_pred hhhHHHHHHHhhhhhhhcccccCCCC
Q 018843 287 PFGLICLLVTIAGGVLYQQSVTGPGA 312 (350)
Q Consensus 287 ~~~~~G~~li~~g~~~~~~~~~~~~~ 312 (350)
..|+.|-.+++.|...+....-|++.
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKKr~ 186 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKKRN 186 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeeecc
Confidence 46899999999999998877655443
No 120
>PRK02237 hypothetical protein; Provisional
Probab=43.09 E-value=1.5e+02 Score=22.64 Aligned_cols=44 Identities=14% Similarity=0.089 Sum_probs=34.4
Q ss_pred HHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcc
Q 018843 106 FIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVA 150 (350)
Q Consensus 106 ~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~ 150 (350)
+..-.....+...+..+.+-++| |.+.++.+..++++|+.++..
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~-Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVR-PDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcC-CChhHHHhHHHHHHhHHHhee
Confidence 33334455666678888898998 799999999999999987643
No 121
>PRK10666 ammonium transporter; Provisional
Probab=43.01 E-value=3.2e+02 Score=26.49 Aligned_cols=65 Identities=11% Similarity=0.044 Sum_probs=28.3
Q ss_pred HHHhhhhhcccCcccc-hHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcchhHHHHhHHHHHHHHH
Q 018843 141 ILGGAVGYVATDSGFT-LTAYSWAFAYLVTITTEMVYIKHMVT-NLGLNTWGFVLYNNLLSLIISPF 205 (350)
Q Consensus 141 ~~~G~~l~~~~~~~~~-~~G~~~~l~s~~~~a~~~v~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 205 (350)
.++|.+-+...-.-.+ +...+.++++.+.+-+...+.|+..| +...+.........+.+.+...+
T Consensus 287 ~LaGLVaITa~a~~v~p~~A~iiG~vag~v~~~~~~~l~~~~~iDD~~~a~~vHgv~Gi~G~l~~gl 353 (428)
T PRK10666 287 AIAGLVGVTPACGYVGVGGALIIGVVAGLAGLWGVTMLKRWLRVDDPCDVFGVHGVCGIVGCILTGI 353 (428)
T ss_pred HhhhhhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCccHhhhHhHHHHHHHHHH
Confidence 3355554443322233 34566666666655444334444333 22334444433344444433333
No 122
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=40.44 E-value=4.6e+02 Score=27.59 Aligned_cols=44 Identities=16% Similarity=0.279 Sum_probs=31.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhc
Q 018843 105 TFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYV 149 (350)
Q Consensus 105 ~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~ 149 (350)
-+.++..+.|.-++.++.....+| +....+.+.+..++|.+.+.
T Consensus 12 Ra~il~~l~PFg~af~~a~~~~~~-~~~~~~~~~~~~~~G~~t~~ 55 (764)
T TIGR02865 12 RAVIVSPMAPFGIAFLAAVLLAKK-GGDKAFFSALGVLLGAISIQ 55 (764)
T ss_pred HHHHhcCCCchHHHHHHHHHHhhc-ccchHHHHHHHHHHHHHHhC
Confidence 446678889999999988887666 33444677777777877553
No 123
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.83 E-value=55 Score=24.39 Aligned_cols=30 Identities=13% Similarity=0.060 Sum_probs=25.8
Q ss_pred HHHHHHccCCCCchhhHHHHHHHhhhhhhh
Q 018843 274 VVINVLIWDKHASPFGLICLLVTIAGGVLY 303 (350)
Q Consensus 274 ~~ls~~~~~e~~t~~~~~G~~li~~g~~~~ 303 (350)
+-+|++.++|++.|.++.|..++..|+.+.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 347888999999999999999998887754
No 124
>COG3162 Predicted membrane protein [Function unknown]
Probab=39.22 E-value=1.6e+02 Score=22.08 Aligned_cols=55 Identities=4% Similarity=-0.186 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh-----c-CCchHHHHHHHHHHHHHHHHHHHHhCc
Q 018843 12 YYTTSGLVVGYALCSSLLAVINKFAIT-----K-FNYPGLLTALQYLTSALGVWVLGKFGF 66 (350)
Q Consensus 12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~-----~-~~~p~~l~~~r~~~~~~~l~~~~~~~~ 66 (350)
.+...+....+++....+.-.+|-.+. + ....+.+...+++.++++..++.++-.
T Consensus 26 a~~ltl~flv~Y~~filLiaf~~~~l~tp~~~~~Vt~Gip~gvg~fv~tfVlt~IYv~rAn 86 (102)
T COG3162 26 AVPLTLIFLVVYFGFILLIAFAPGWLATPLFGASVTRGIPFGVGVFVMTFVLTGIYVRRAN 86 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHhcCcccCCceehhHhHHHHHHHHHHHHHHHHhhHhh
Confidence 445555555666667777788885553 1 223445788888999888888776543
No 125
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=38.19 E-value=4.1e+02 Score=26.31 Aligned_cols=39 Identities=28% Similarity=0.427 Sum_probs=22.9
Q ss_pred HHhHHHHHHHHHH----HHHcc----cCCCchhhHHHHHHHHHhhhh
Q 018843 109 FRSLTPLLVALAD----TAFRR----QPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 109 l~~~~pi~v~ll~----~l~~~----e~~~~~~~~~~~~l~~~G~~l 147 (350)
.++++|+++++++ +++.+ +|-|+.+.-+++.+.++|...
T Consensus 329 fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~f 375 (498)
T COG3104 329 FQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGF 375 (498)
T ss_pred HHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHH
Confidence 4556777776665 33333 232566666777777766654
No 126
>PHA03049 IMV membrane protein; Provisional
Probab=37.40 E-value=35 Score=23.32 Aligned_cols=23 Identities=22% Similarity=0.254 Sum_probs=16.9
Q ss_pred hhHHHHHHHhhhhhhhcccccCC
Q 018843 288 FGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 288 ~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
..++++.+++.|.++|..-+++.
T Consensus 5 ~~l~iICVaIi~lIvYgiYnkk~ 27 (68)
T PHA03049 5 IILVIICVVIIGLIVYGIYNKKT 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 34678888899999888655544
No 127
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=37.34 E-value=21 Score=25.86 Aligned_cols=29 Identities=17% Similarity=0.246 Sum_probs=23.1
Q ss_pred CCCchhhHHHHHHHhhhhhhhcccccCCC
Q 018843 283 KHASPFGLICLLVTIAGGVLYQQSVTGPG 311 (350)
Q Consensus 283 e~~t~~~~~G~~li~~g~~~~~~~~~~~~ 311 (350)
-..++..++|+.++++|..+|..+..+++
T Consensus 3 ~~~~~~~iLgi~l~~~~~~Ly~lr~~~Pe 31 (84)
T PF07444_consen 3 FGFGPSYILGIILILGGLALYFLRFFRPE 31 (84)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 45688999999999999999986555443
No 128
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=37.16 E-value=4.2e+02 Score=26.18 Aligned_cols=40 Identities=18% Similarity=0.119 Sum_probs=21.7
Q ss_pred HHHhHHHHHHHHHHH----HHcc----cCCCchhhHHHHHHHHHhhhh
Q 018843 108 VFRSLTPLLVALADT----AFRR----QPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 108 il~~~~pi~v~ll~~----l~~~----e~~~~~~~~~~~~l~~~G~~l 147 (350)
-.++.+|+++.+++. ++.+ +|-|+.....++.+.+.|...
T Consensus 312 ~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f 359 (493)
T PRK15462 312 MFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGF 359 (493)
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 345677777775553 3222 222455555666666666553
No 129
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=36.15 E-value=5.5e+02 Score=27.16 Aligned_cols=18 Identities=28% Similarity=0.554 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHhcCCchH
Q 018843 26 SSLLAVINKFAITKFNYPG 44 (350)
Q Consensus 26 s~~~~~~nK~~~~~~~~p~ 44 (350)
+..+..++. +.+++++|.
T Consensus 318 ~~~~p~~~~-i~~gf~~p~ 335 (843)
T PF09586_consen 318 SFFIPPLNS-IWNGFSYPN 335 (843)
T ss_pred HHHHHHHHH-HHhCCcccc
Confidence 334444433 445554443
No 130
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=35.79 E-value=1.5e+02 Score=22.46 Aligned_cols=45 Identities=11% Similarity=0.082 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhccc
Q 018843 262 FTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 262 ~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~ 306 (350)
.+-++-+=.+.+.++.+..=+.+|+.+.++|.++.++|+.+..+.
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 444555666777888888888999999999999999998876655
No 131
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=35.45 E-value=3e+02 Score=25.00 Aligned_cols=56 Identities=7% Similarity=0.010 Sum_probs=42.8
Q ss_pred hhccchhHHHHHHhHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcc
Q 018843 98 LRHANVDTFIVFRSLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSG 154 (350)
Q Consensus 98 l~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~ 154 (350)
.+.-.+.++..+....--.+.+++++++.|++ +-...-+..+...|+.+=.+++.+
T Consensus 281 I~~fGA~~aatvTTaRKavTi~lSfllFsKPf-T~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 281 IKLFGALIAATVTTARKAVTILLSFLLFSKPF-TEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HHHhchhHHHHHHHhHhHHHHHHHHHHHcCch-HHHHhhhhHHHHHHHHhhcccCCC
Confidence 33445666666777777788999999999996 788888889999999986655533
No 132
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=34.93 E-value=3.3e+02 Score=24.19 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhh
Q 018843 262 FTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLY 303 (350)
Q Consensus 262 ~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~ 303 (350)
.+....+....=.+.|.++.|.-+-..+.+|..+.+.=..+|
T Consensus 163 Ls~a~fl~a~~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly 204 (243)
T KOG1623|consen 163 LSFALFLVAVQWLLYGLLIKDFFIAIPNVLGFLLGLIQLILY 204 (243)
T ss_pred HHHHHHHHHHHHHHHHHHhcCeEEEcccHHHHHHHHHHHHHh
Confidence 355445544444455666655555567889999999888888
No 133
>PF15102 TMEM154: TMEM154 protein family
Probab=34.85 E-value=53 Score=26.52 Aligned_cols=21 Identities=10% Similarity=0.006 Sum_probs=10.9
Q ss_pred HHHHHHHhhhhhhhcccccCC
Q 018843 290 LICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 290 ~~G~~li~~g~~~~~~~~~~~ 310 (350)
+++.++++..++++.+.|+|+
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr 86 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKR 86 (146)
T ss_pred HHHHHHHHHHHHheeEEeecc
Confidence 445555555566555554443
No 134
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=33.57 E-value=21 Score=24.46 Aligned_cols=23 Identities=35% Similarity=0.379 Sum_probs=17.1
Q ss_pred hhHHHHHHHhhhhhhhcccccCC
Q 018843 288 FGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 288 ~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
.-++++.+++.|.++|..-++++
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~~ 27 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRKK 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 35678889999999988655443
No 135
>COG0004 AmtB Ammonia permease [Inorganic ion transport and metabolism]
Probab=33.10 E-value=4.5e+02 Score=25.28 Aligned_cols=84 Identities=13% Similarity=0.015 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccchH-HHHHHHHHHHHHHHHHHHHHHHhh-cCCCCcch
Q 018843 113 TPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTLT-AYSWAFAYLVTITTEMVYIKHMVT-NLGLNTWG 190 (350)
Q Consensus 113 ~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~~-G~~~~l~s~~~~a~~~v~~k~~~~-~~~~~~~~ 190 (350)
.-+--++.+++. ++| |+. ...+-..++|.+-+...-.-.+++ ..+.++++.+..-+..-..|+..| |+.++.+.
T Consensus 240 g~l~w~~~e~~~-~~K-p~~--lg~~sG~vAGLVaITpaag~V~p~~A~iiGii~g~i~~~a~~~lk~~l~~DD~ld~f~ 315 (409)
T COG0004 240 GALGWMLIEWLR-NGK-PSL--LGAASGAVAGLVAITPAAGFVSPWGALIIGLIAGVICYFAVKLLKKKLGVDDALDVFG 315 (409)
T ss_pred HHHHHHHHHHHH-cCC-Cch--hhhhhHHHhHHHhcCCcccccCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccee
Confidence 334455566666 455 444 445555666776665443333443 455555554443333333444333 33455555
Q ss_pred hHHHHhHHHH
Q 018843 191 FVLYNNLLSL 200 (350)
Q Consensus 191 ~~~~~~~~~~ 200 (350)
........+.
T Consensus 316 vHGvgGi~G~ 325 (409)
T COG0004 316 VHGVGGIVGA 325 (409)
T ss_pred ccchhhHHHH
Confidence 5444444444
No 136
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.60 E-value=1.7e+02 Score=22.36 Aligned_cols=40 Identities=23% Similarity=0.234 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHccC-CCCchhhHHHHHHHhhhhhhhcccc
Q 018843 268 VNKFLTVVINVLIWD-KHASPFGLICLLVTIAGGVLYQQSV 307 (350)
Q Consensus 268 l~~v~~~~ls~~~~~-e~~t~~~~~G~~li~~g~~~~~~~~ 307 (350)
-..++.+.+||+.=+ -.-++|.++...++=.+.-+.+..|
T Consensus 54 sGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv~R 94 (116)
T COG5336 54 SGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVLR 94 (116)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 344566667776521 1123354444444333333344333
No 137
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=32.18 E-value=55 Score=29.55 Aligned_cols=48 Identities=10% Similarity=0.106 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCCC
Q 018843 266 GVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGAA 313 (350)
Q Consensus 266 ~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~~ 313 (350)
..-.++....+||++.+.+.+..|+....++-+|+++.+..+.++-+.
T Consensus 98 Rsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 98 RSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred ecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 334456677899999999999999999999999999998887765443
No 138
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=31.50 E-value=1.8e+02 Score=21.56 Aligned_cols=61 Identities=10% Similarity=0.047 Sum_probs=35.1
Q ss_pred HHHhhccchhHHHHHHHHHHHHHHHHHHHc---cCCC-CchhhHHHHHHHhhhhhhhcccccCCC
Q 018843 251 FAARKAISATAFTVTGVVNKFLTVVINVLI---WDKH-ASPFGLICLLVTIAGGVLYQQSVTGPG 311 (350)
Q Consensus 251 ~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~---~~e~-~t~~~~~G~~li~~g~~~~~~~~~~~~ 311 (350)
..++|++.-.-.-..-.+.-+..+++|.+. .++. +-...|.|.+.-+.+.-++....+|++
T Consensus 22 Vq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r~~ 86 (93)
T PF06946_consen 22 VQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNRSK 86 (93)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhhhh
Confidence 456777764444444445555566665543 3322 223358898888888888765555433
No 139
>PF03806 ABG_transport: AbgT putative transporter family; InterPro: IPR004697 The p-aminobenzoyl-glutamate transporter family includes two putative transporters, the AbgT protein of Escherichia coli and MtrF of Neisseria gonorrhoeae. AbgT expression is apparently cryptic in wild type cells, but when present on a high copy number plasmid, or when expressed at higher levels due to mutation, it allows utilization of p-aminobenzoyl-glutamate as a source of p-aminobenzoate for p-aminobenzoate auxotrophs []. p-Aminobenzoate is a constituent of, and a precursor for, the biosynthesis of folic acid. It is not currently known if AbgT is naturally involved in transporting p-aminobenzoyl-glutamate, or if it only becomes involved when under altered regulation. MtrF is an inner membrane protein which, together with the MtrCDE efflux pump, is required for high-level resistance to hydrophobic antimicrobial agents in N. gonorrhoeae []. Its role in this process is not known, but it has been suggested that it may be a component of the efflux pump which is dispensible for basal activity, but required for high-level activity [].
Probab=31.49 E-value=3.6e+02 Score=26.74 Aligned_cols=71 Identities=7% Similarity=-0.088 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhhcccccCCCC
Q 018843 239 SCVFGLLISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLYQQSVTGPGA 312 (350)
Q Consensus 239 ~~~~~~~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~~~~~~~~~~ 312 (350)
.+..+....|+....+...++...++.... ..++=--.--+-..|++......+++..+..+.-.|--++|
T Consensus 159 ~afa~vs~GfsAnl~i~~~D~ll~giT~~A---a~~idp~~~v~p~~N~yF~~aSt~~l~~v~~~vt~kivePr 229 (502)
T PF03806_consen 159 AAFAGVSGGFSANLLIGSTDALLAGITTSA---AQIIDPSYTVNPLMNYYFMIASTFVLTIVGTWVTEKIVEPR 229 (502)
T ss_pred HHHHHHhccccceeeccchhHHHHHhHHHH---HHhcCCCceechHHHHHHHHHHHHHHHHHHHHHhhhhhccc
Confidence 344455555666666777788777765543 22221111122344677777766666665554444443333
No 140
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=29.82 E-value=5e+02 Score=24.78 Aligned_cols=29 Identities=10% Similarity=0.295 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 018843 234 FAVALSCVFGLLISFFGFAARKAISATAF 262 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~sa~~~ 262 (350)
...+.....+...++..++.+++....+.
T Consensus 352 ~g~~~~~~~~~~~s~i~~~~l~~~~~LRv 380 (399)
T PF00909_consen 352 LGIVVILAWSFVVSYIIFKILKKFGGLRV 380 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-SB-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 33444444555666666666776665544
No 141
>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561). Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.
Probab=29.19 E-value=3.8e+02 Score=23.24 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=16.7
Q ss_pred hhhHHHHHHHhhhhhhhcccccC
Q 018843 287 PFGLICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 287 ~~~~~G~~li~~g~~~~~~~~~~ 309 (350)
..+..|+.+++.|.++......+
T Consensus 175 l~N~~gl~~~~fg~~V~~~~~~~ 197 (214)
T cd08764 175 LGNFIGIVLVIFGGLVVYLVTEP 197 (214)
T ss_pred HHHHHHHHHHHHHHHHHHhccCc
Confidence 35888999999998875544433
No 142
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=28.57 E-value=58 Score=25.76 Aligned_cols=50 Identities=12% Similarity=0.087 Sum_probs=28.6
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHccCC--CCchhhHHHHHHHhhhhhhhc
Q 018843 255 KAISATAFTVTGVVNKFLTVVINVLIWDK--HASPFGLICLLVTIAGGVLYQ 304 (350)
Q Consensus 255 ~~~sa~~~s~~~~l~~v~~~~ls~~~~~e--~~t~~~~~G~~li~~g~~~~~ 304 (350)
+..+....+.+.|+-|++..+++.++... ...+...++.+..+...+++.
T Consensus 63 ~~~~~~~aa~l~Y~lPll~li~g~~l~~~~~~~e~~~~l~~l~~l~~~~~~~ 114 (135)
T PF04246_consen 63 PESSLLKAAFLVYLLPLLALIAGAVLGSYLGGSELWAILGGLLGLALGFLIL 114 (135)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566777788888888777766431 114455555544444444443
No 143
>PF03729 DUF308: Short repeat of unknown function (DUF308); InterPro: IPR005325 This represents a group of short repeats that occurs in a limited number of membrane proteins. It may divide further in short repeats of around 7-10 residues of the pattern G-#-X(2)-#(2)-X (#=hydrophobic).
Probab=28.32 E-value=1.9e+02 Score=19.35 Aligned_cols=24 Identities=17% Similarity=0.239 Sum_probs=17.0
Q ss_pred HHHHHHHHhhhhhcccCcccchHH
Q 018843 136 LSLVIILGGAVGYVATDSGFTLTA 159 (350)
Q Consensus 136 ~~~~l~~~G~~l~~~~~~~~~~~G 159 (350)
.+++....|+.+...++...+...
T Consensus 2 ~Gil~iv~Gi~~l~~p~~~~~~~~ 25 (72)
T PF03729_consen 2 SGILFIVLGILLLFNPDASLAALA 25 (72)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHH
Confidence 467888889988877766554443
No 144
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=28.24 E-value=5.4e+02 Score=24.71 Aligned_cols=28 Identities=7% Similarity=0.167 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhH
Q 018843 234 FAVALSCVFGLLISFFGFAARKAISATA 261 (350)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~sa~~ 261 (350)
..++.....++...+..++.++++...+
T Consensus 356 ~g~~~~~~~s~~~~~ii~~il~~~~~lR 383 (403)
T TIGR00836 356 IGIAAIIAWAFVVTFIILKILDKTIGLR 383 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 3444444555666666667777766544
No 145
>PRK14774 lipoprotein signal peptidase; Provisional
Probab=27.23 E-value=68 Score=27.11 Aligned_cols=7 Identities=0% Similarity=0.140 Sum_probs=2.8
Q ss_pred hHHHHHH
Q 018843 289 GLICLLV 295 (350)
Q Consensus 289 ~~~G~~l 295 (350)
+++=+.+
T Consensus 133 NvAD~~I 139 (185)
T PRK14774 133 NVADIAI 139 (185)
T ss_pred EHHHHHH
Confidence 3443333
No 146
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=25.05 E-value=6.4e+02 Score=24.47 Aligned_cols=23 Identities=13% Similarity=0.330 Sum_probs=17.2
Q ss_pred hhHHHHHHHhhhhhhhcccccCC
Q 018843 288 FGLICLLVTIAGGVLYQQSVTGP 310 (350)
Q Consensus 288 ~~~~G~~li~~g~~~~~~~~~~~ 310 (350)
....|.++..+|..+|.+.++++
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~~~~ 439 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRARKER 439 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 45568888899988888765544
No 147
>COG1971 Predicted membrane protein [Function unknown]
Probab=24.67 E-value=81 Score=26.73 Aligned_cols=43 Identities=16% Similarity=0.084 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHH-Hhhhhhh
Q 018843 260 TAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLV-TIAGGVL 302 (350)
Q Consensus 260 ~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~l-i~~g~~~ 302 (350)
...++...+.|+.....+.++-+..-.+-+|+|.++ .+.|...
T Consensus 41 ~~fG~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~m 84 (190)
T COG1971 41 LIFGVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKM 84 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566677777777766665667778776554 4555544
No 148
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=24.31 E-value=2.1e+02 Score=20.88 Aligned_cols=54 Identities=11% Similarity=0.062 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHh-----c-CCchHHHHHHHHHHHHHHHHHHHHhC
Q 018843 12 YYTTSGLVVGYALCSSLLAVINKFAIT-----K-FNYPGLLTALQYLTSALGVWVLGKFG 65 (350)
Q Consensus 12 ~~~~~~~~~~~~~~s~~~~~~nK~~~~-----~-~~~p~~l~~~r~~~~~~~l~~~~~~~ 65 (350)
.+........++.....+....+..+. + .+..+.+...++..++.+.+.+.+.-
T Consensus 18 ~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~~~~~~l~~~Yv~~A 77 (91)
T PF04341_consen 18 AWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQIVFAWVLTWLYVRRA 77 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444455546666666666664 2 23334578888888888888876643
No 149
>PF05084 GRA6: Granule antigen protein (GRA6); InterPro: IPR008119 Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage []. The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=24.17 E-value=1.1e+02 Score=25.04 Aligned_cols=18 Identities=17% Similarity=0.030 Sum_probs=9.6
Q ss_pred hHHHHHHHhhhhhhhccc
Q 018843 289 GLICLLVTIAGGVLYQQS 306 (350)
Q Consensus 289 ~~~G~~li~~g~~~~~~~ 306 (350)
-++|.+++...+....|.
T Consensus 152 R~IG~~VlA~~VA~L~~~ 169 (215)
T PF05084_consen 152 RLIGAVVLAVSVAMLTWF 169 (215)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456666655555444443
No 150
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=23.54 E-value=24 Score=31.78 Aligned_cols=53 Identities=23% Similarity=0.274 Sum_probs=46.9
Q ss_pred HHHhhccchhHHHHHHHHHHHHHHHHHHHccCCCCchhhHHHHHHHhhhhhhh
Q 018843 251 FAARKAISATAFTVTGVVNKFLTVVINVLIWDKHASPFGLICLLVTIAGGVLY 303 (350)
Q Consensus 251 ~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~e~~t~~~~~G~~li~~g~~~~ 303 (350)
..|+++.+-...-+-..+..++++++++++++++-+..-..|+.+++.|..+-
T Consensus 120 nlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lG 172 (347)
T KOG1442|consen 120 NLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLG 172 (347)
T ss_pred ceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheec
Confidence 36889999888888888999999999999999999999999999999887653
No 151
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=23.18 E-value=61 Score=19.90 Aligned_cols=19 Identities=11% Similarity=0.281 Sum_probs=11.4
Q ss_pred HHHHHHhhhhhhhcccccC
Q 018843 291 ICLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 291 ~G~~li~~g~~~~~~~~~~ 309 (350)
+|.++++++.+++.|.+++
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 4566667777777555443
No 152
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=23.07 E-value=80 Score=17.98 Aligned_cols=17 Identities=35% Similarity=0.327 Sum_probs=9.1
Q ss_pred CCchhhHHHHHHHhhhh
Q 018843 284 HASPFGLICLLVTIAGG 300 (350)
Q Consensus 284 ~~t~~~~~G~~li~~g~ 300 (350)
.-++..++|+.++..+.
T Consensus 9 ~~~~~~~~G~~l~~~~~ 25 (34)
T TIGR01167 9 GNSLLLLLGLLLLGLGG 25 (34)
T ss_pred ccHHHHHHHHHHHHHHH
Confidence 33455677774444433
No 153
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=22.78 E-value=58 Score=29.34 Aligned_cols=24 Identities=17% Similarity=0.090 Sum_probs=19.5
Q ss_pred CchhhHHHHHHHhhhhhhhccccc
Q 018843 285 ASPFGLICLLVTIAGGVLYQQSVT 308 (350)
Q Consensus 285 ~t~~~~~G~~li~~g~~~~~~~~~ 308 (350)
+|..|+++..+++.|+.+..++++
T Consensus 235 ls~~Q~~sl~~i~~g~~~~~~~~~ 258 (269)
T PRK12437 235 LRIAQVISIPLIIIGIILIIYRRK 258 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 689999999999999887654443
No 154
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=22.58 E-value=7e+02 Score=24.00 Aligned_cols=88 Identities=11% Similarity=0.028 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhhhcccCcccch-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchh
Q 018843 113 TPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVGYVATDSGFTL-TAYSWAFAYLVTITTEMVYIKHMVTNLGLNTWGF 191 (350)
Q Consensus 113 ~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l~~~~~~~~~~-~G~~~~l~s~~~~a~~~v~~k~~~~~~~~~~~~~ 191 (350)
.-+..++++++.. +| ++.. ...-.+++|.+-+.....-.++ ...+.++++.+.+-+...+.||+.-++..+....
T Consensus 253 g~l~~~~~~~~~~-gk-~~~~--~~~nG~LAGLVaITa~~~~v~p~~A~iiG~iag~v~~~~~~~~~~~~iDD~~~~~~v 328 (404)
T TIGR03644 253 GAIAALLLTKLLF-GK-ADLT--MVLNGALAGLVAITAEPLTPSPLAATLIGAVGGVIVVFSIVLLDKLKIDDPVGAISV 328 (404)
T ss_pred HHHHHHHHHHHHc-CC-CCHH--HHHHHHHhhhhhhccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcCchHh
Confidence 3344445555443 44 3443 2333445555555443333343 4566666655544444444444221223344334
Q ss_pred HHHHhHHHHHHHH
Q 018843 192 VLYNNLLSLIISP 204 (350)
Q Consensus 192 ~~~~~~~~~~~~~ 204 (350)
.....+.+.++..
T Consensus 329 Hg~~Gi~G~i~~g 341 (404)
T TIGR03644 329 HGVAGIWGTLVVP 341 (404)
T ss_pred hhHHHHHHHHHHH
Confidence 3333344443333
No 155
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=21.77 E-value=3.7e+02 Score=20.48 Aligned_cols=51 Identities=12% Similarity=0.124 Sum_probs=31.9
Q ss_pred hhhhccchhHHHHHH-hHHHHHHHHHHHHHcccCCCchhhHHHHHHHHHhhhh
Q 018843 96 NLLRHANVDTFIVFR-SLTPLLVALADTAFRRQPCPSRLTFLSLVIILGGAVG 147 (350)
Q Consensus 96 ~al~~~s~s~~~il~-~~~pi~v~ll~~l~~~e~~~~~~~~~~~~l~~~G~~l 147 (350)
.+.+.-+.+.-.+++ ..+....+.++.+++||++ ++....+.+.+++++..
T Consensus 54 iG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l-~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 54 IGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPL-KWNYLWAFLCILGAVYF 105 (108)
T ss_pred hhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCc-cHHHHHHHHHHHHhhhe
Confidence 444444444444443 3444455678899999996 78877777777666543
No 156
>PF10624 TraS: Plasmid conjugative transfer entry exclusion protein TraS; InterPro: IPR018898 Entry exclusion (Eex) is a process which prevents redundant transfer of DNA between donor cells. TraS is a protein involved in Eex. It blocks redundant conjugative DNA synthesis and transport between donor cells, and it is suggested that TraS interferes with a signalling pathway that is required to trigger DNA transfer []. TraS on the recipient cell is known to form an interaction with TraG on the donor cell [].
Probab=21.43 E-value=4.2e+02 Score=21.03 Aligned_cols=36 Identities=11% Similarity=0.091 Sum_probs=25.5
Q ss_pred hhhhhhccchhHHHHHHhHHHHHHHHHHHHHcccCC
Q 018843 94 NTNLLRHANVDTFIVFRSLTPLLVALADTAFRRQPC 129 (350)
Q Consensus 94 ~~~al~~~s~s~~~il~~~~pi~v~ll~~l~~~e~~ 129 (350)
+...+-|+-.+...++.-+..+.+.+++.+.--+|+
T Consensus 61 fsk~vwyi~mpVcsllsPllsLM~fI~gtL~~lrrv 96 (164)
T PF10624_consen 61 FSKGVWYILMPVCSLLSPLLSLMVFIIGTLYELRRV 96 (164)
T ss_pred cccceEEeeecHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 345566777788888777777778888777755554
No 157
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=21.42 E-value=7.5e+02 Score=25.08 Aligned_cols=65 Identities=23% Similarity=0.156 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHccC---CCCc---hhhHH--HHHHHhhhhhhhcccccC
Q 018843 245 LISFFGFAARKAISATAFTVTGVVNKFLTVVINVLIWD---KHAS---PFGLI--CLLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 245 ~~~~~~~~~i~~~sa~~~s~~~~l~~v~~~~ls~~~~~---e~~t---~~~~~--G~~li~~g~~~~~~~~~~ 309 (350)
..+|..-.+=+++.++.-++....--=+.--+|.++.+ |.++ ...+. +.+++++..+.+++...+
T Consensus 480 ~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~ 552 (618)
T KOG3762|consen 480 IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLLLKR 552 (618)
T ss_pred HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 34444434455666666555554444334444445443 2232 22333 444555555556654333
No 158
>PF14150 YesK: YesK-like protein
Probab=20.72 E-value=3.3e+02 Score=19.60 Aligned_cols=40 Identities=20% Similarity=0.199 Sum_probs=18.4
Q ss_pred HHHHHHhhcCCCCcchhHHHHhHHHHHHHHHHHHHhccHHH
Q 018843 175 VYIKHMVTNLGLNTWGFVLYNNLLSLIISPFFWFLTGEYGE 215 (350)
Q Consensus 175 v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (350)
.+.|+..++++ ..+.......++|+...+...+..|.|..
T Consensus 17 ~~lr~r~p~k~-~~~il~~ililis~~~v~~S~f~vGGweG 56 (81)
T PF14150_consen 17 VLLRKRFPKKQ-PEIILPLILILISLLTVLISIFLVGGWEG 56 (81)
T ss_pred HHHHHhCCCcc-hhHHHHHHHHHHHHHHHHHHHheEcchhh
Confidence 45555555433 22222222334455455555555555543
No 159
>PF06365 CD34_antigen: CD34/Podocalyxin family; InterPro: IPR013836 This family consists of several mammalian CD34 antigen proteins. The CD34 antigen is a human leukocyte membrane protein expressed specifically by lymphohematopoietic progenitor cells. CD34 is a phosphoprotein. Activation of protein kinase C (PKC) has been found to enhance CD34 phosphorylation [, ]. This family contains several eukaryotic podocalyxin proteins. Podocalyxin is a major membrane protein of the glomerular epithelium and is thought to be involved in maintenance of the architecture of the foot processes and filtration slits characteristic of this unique epithelium by virtue of its high negative charge. Podocalyxin functions as an anti-adhesin that maintains an open filtration pathway between neighbouring foot processes in the glomerular epithelium by charge repulsion [].
Probab=20.29 E-value=1.3e+02 Score=25.79 Aligned_cols=17 Identities=29% Similarity=0.221 Sum_probs=8.9
Q ss_pred HHHHhhhhhhhcccccC
Q 018843 293 LLVTIAGGVLYQQSVTG 309 (350)
Q Consensus 293 ~~li~~g~~~~~~~~~~ 309 (350)
..+++++...|...++|
T Consensus 112 lLla~~~~~~Y~~~~Rr 128 (202)
T PF06365_consen 112 LLLAILLGAGYCCHQRR 128 (202)
T ss_pred HHHHHHHHHHHHhhhhc
Confidence 55555555555544443
Done!