Query 018847
Match_columns 349
No_of_seqs 180 out of 1499
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 04:32:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018847.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018847hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 8E-107 2E-111 782.7 25.0 301 22-330 19-324 (324)
2 cd00693 secretory_peroxidase H 100.0 4E-100 1E-104 733.5 24.9 298 27-329 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 1.6E-71 3.4E-76 518.4 12.6 229 44-294 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 2.4E-69 5.1E-74 515.4 21.8 233 42-328 15-258 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.6E-66 3.5E-71 490.3 20.5 231 39-316 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 4.2E-65 9E-70 479.3 20.8 232 30-315 3-248 (250)
7 PLN02879 L-ascorbate peroxidas 100.0 4.4E-63 9.6E-68 465.0 20.5 222 40-315 16-248 (251)
8 cd00692 ligninase Ligninase an 100.0 1.7E-62 3.7E-67 475.9 22.1 240 40-334 16-291 (328)
9 cd00314 plant_peroxidase_like 100.0 3.1E-59 6.8E-64 441.2 18.7 224 43-311 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.4E-56 2.9E-61 441.4 18.3 273 28-320 29-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 8.8E-54 1.9E-58 445.2 19.8 271 28-318 39-406 (716)
12 PRK15061 catalase/hydroperoxid 100.0 2E-50 4.2E-55 418.2 19.5 273 28-320 41-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 5E-49 1.1E-53 370.0 11.6 213 50-311 33-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 1.6E-39 3.4E-44 309.2 17.6 221 46-313 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.7E-34 3.8E-39 301.1 16.9 221 43-314 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 9.6E-34 2.1E-38 294.2 18.6 220 46-313 442-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1.4E-31 3.1E-36 267.0 16.7 258 42-313 70-416 (730)
18 COG0376 KatG Catalase (peroxid 99.5 3.7E-13 8E-18 135.8 13.1 216 46-313 452-725 (730)
19 PTZ00411 transaldolase-like pr 72.6 40 0.00086 33.7 10.7 49 138-186 180-231 (333)
20 PF11895 DUF3415: Domain of un 55.0 14 0.0003 29.4 3.0 32 297-332 2-33 (80)
21 PRK05269 transaldolase B; Prov 52.2 1.1E+02 0.0023 30.4 9.5 50 137-186 169-221 (318)
22 PRK12346 transaldolase A; Prov 43.4 1.3E+02 0.0028 29.8 8.5 65 121-186 150-220 (316)
23 PRK12309 transaldolase/EF-hand 41.7 2.6E+02 0.0057 28.5 10.6 48 138-186 174-225 (391)
24 TIGR00874 talAB transaldolase. 39.3 2.5E+02 0.0055 27.8 9.8 50 136-186 166-219 (317)
25 cd00957 Transaldolase_TalAB Tr 33.4 2.2E+02 0.0049 28.1 8.4 48 138-186 168-219 (313)
26 PF07172 GRP: Glycine rich pro 26.9 42 0.0009 27.4 1.7 15 1-16 1-15 (95)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=8.2e-107 Score=782.70 Aligned_cols=301 Identities=44% Similarity=0.780 Sum_probs=284.5
Q ss_pred CCccCCCCcccccCCChhHHHHHHHHHHHHHhhCcchhhhHHHhhhhcccccCCCcceeccCCCCCccccccCCCCCchh
Q 018847 22 SPAQAQLSPFFYSSTCPNVTNIIREVLQNAFLSDIRIGASLIRLHFHDCFVNGCDASILLDNTTTIDSEKFAAPNNNSAR 101 (349)
Q Consensus 22 ~~~~~~l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDaSill~~~~~~~~Ek~~~~N~~~~~ 101 (349)
.++.++|+++||++|||++|+||++.|++.+.++|+++|++|||+||||||+||||||||+++. .||++++|. +++
T Consensus 19 ~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~---~Ek~a~~N~-~l~ 94 (324)
T PLN03030 19 LVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSN---TEKTALPNL-LLR 94 (324)
T ss_pred cchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCc---ccccCCCCc-Ccc
Confidence 3445679999999999999999999999999999999999999999999999999999999643 799999998 789
Q ss_pred hHHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCccccccccCCCCCCCCHHHHHHHHHHc
Q 018847 102 GFEVVDDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNV 181 (349)
Q Consensus 102 g~~~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~ 181 (349)
||++|+.||+++|++||++|||||||||||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++
T Consensus 95 Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~ 173 (324)
T PLN03030 95 GYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAK 173 (324)
T ss_pred hHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999877664 8999999999999999999
Q ss_pred CCCccchhhhhccccccccccccccccccccCCCCC-CCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHH
Q 018847 182 GLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNNTG-NPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKYF 260 (349)
Q Consensus 182 Glt~~~e~VaLsGaHTiG~~hc~~f~~Rl~~f~g~~-~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy 260 (349)
||+.+ |||+||||||||++||.+|.+|||||+|++ .+||+||+.|++.|+..||..++....+++|+.||.+|||+||
T Consensus 174 Gl~~~-DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy 252 (324)
T PLN03030 174 GLNTQ-DLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFF 252 (324)
T ss_pred CCCHH-HheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHH
Confidence 99999 999999999999999999999999999875 5899999999999999999633333467899999999999999
Q ss_pred HHhhhcccccccccccccCCccchHHHHHHhhhCH----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 018847 261 FNLQISKGLLQSDQELFSTPGADTTAIVNVFSSNQ----AAFFKSFVISMIRMGNLKPLTGNQGEIRSNCRRVN 330 (349)
Q Consensus 261 ~~l~~~~glL~SD~~L~~d~~~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 330 (349)
+||++++|+|+|||+|++|+ +|+++|++||.|+ +.|+++|++||+|||+|+||||.+||||++|+++|
T Consensus 253 ~nll~~rGlL~SDq~L~~d~--~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 253 SNLKNGRGILESDQKLWTDA--STRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHHHhcCCCcCCchHhhcCc--cHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 99999999999999999999 9999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=4.5e-100 Score=733.48 Aligned_cols=298 Identities=56% Similarity=0.944 Sum_probs=287.4
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHhhCcchhhhHHHhhhhcccccCCCcceeccCCCCCccccccCCCCCchhhHHHH
Q 018847 27 QLSPFFYSSTCPNVTNIIREVLQNAFLSDIRIGASLIRLHFHDCFVNGCDASILLDNTTTIDSEKFAAPNNNSARGFEVV 106 (349)
Q Consensus 27 ~l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDaSill~~~~~~~~Ek~~~~N~~~~~g~~~I 106 (349)
||+++||++|||++|+||+++|++.+.++++++|++|||+||||||+||||||||++++++.+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 59999999999999999999999999999999999999999999999999999999887778999999998 67999999
Q ss_pred HHHHHHHHhhCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCcc
Q 018847 107 DDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDN 186 (349)
Q Consensus 107 d~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Glt~~ 186 (349)
+.||+++|+.||++||||||||||||+||+++|||.|+|++||+|++++.+..+ ++||.|+.+++++++.|+++||+++
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999999999999999999998877655 7899999999999999999999999
Q ss_pred chhhhhccccccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhc
Q 018847 187 FDLVALSGAHTFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKYFFNLQIS 266 (349)
Q Consensus 187 ~e~VaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~ 266 (349)
|||||+||||||++||.+|.+|||+|+|++.+||+||+.|+..|++.||...+....+++|+.||.+|||+||++|+.+
T Consensus 159 -d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~ 237 (298)
T cd00693 159 -DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237 (298)
T ss_pred -HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999765555678999999999999999999999
Q ss_pred ccccccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccccc
Q 018847 267 KGLLQSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGNLKPLTGNQGEIRSNCRRV 329 (349)
Q Consensus 267 ~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 329 (349)
+|+|+|||+|+.|+ +|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|+++
T Consensus 238 ~glL~SD~~L~~d~--~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 238 RGLLTSDQALLSDP--RTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCccCCHHhccCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999 99999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.6e-71 Score=518.44 Aligned_cols=229 Identities=48% Similarity=0.842 Sum_probs=209.9
Q ss_pred HHHHHHHHHhhCcchhhhHHHhhhhcccc-cCCCcceeccCCCCCccccccCCCCCchhhHHHHHHHHHHHHhhCCCCcC
Q 018847 44 IREVLQNAFLSDIRIGASLIRLHFHDCFV-NGCDASILLDNTTTIDSEKFAAPNNNSARGFEVVDDMKAAVERACPGVVS 122 (349)
Q Consensus 44 Vr~~v~~~~~~~~~~aa~llRL~FHDcfv-~GcDaSill~~~~~~~~Ek~~~~N~~~~~g~~~Id~iK~~le~~cp~~VS 122 (349)
||++|++++.++++++|+||||+|||||+ +|||||||+. .+|+++++|.++.+++++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 79999999999999999999999999999 9999999993 48999999996556999999999999999999999
Q ss_pred HHHHHHHhhhhHHhhcCCCCceeccCcCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccchhhhhcccccccccc
Q 018847 123 CADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQ 202 (349)
Q Consensus 123 cADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Glt~~~e~VaLsGaHTiG~~h 202 (349)
|||||+||+|+||+.+|||.|+|++||+|++++...++ .+||.|..++++|++.|+++||+++ |||||+||||||++|
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~-e~VaLsGaHTiG~~~ 153 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAE-EMVALSGAHTIGRAH 153 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HH-HHHHHHGGGGSTEES
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchh-hhcceecccccccce
Confidence 99999999999999999999999999999999998776 7899999999999999999999999 999999999999999
Q ss_pred ccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhcccccccccccccCCcc
Q 018847 203 CRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKYFFNLQISKGLLQSDQELFSTPGA 282 (349)
Q Consensus 203 c~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~~ 282 (349)
|.+|. ||| + .+||.||+.|+.. .| ..++++ .+++| ||.+|||+||++|++++|+|+||++|+.|+
T Consensus 154 c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~-- 218 (230)
T PF00141_consen 154 CSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDP-- 218 (230)
T ss_dssp GGCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHST--
T ss_pred ecccc-ccc-c----cccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCH--
Confidence 99999 999 5 6799999999988 99 333333 78899 999999999999999999999999999999
Q ss_pred chHHHHHHhhhC
Q 018847 283 DTTAIVNVFSSN 294 (349)
Q Consensus 283 ~t~~~V~~yA~d 294 (349)
+|+++|++||+|
T Consensus 219 ~t~~~V~~yA~d 230 (230)
T PF00141_consen 219 ETRPIVERYAQD 230 (230)
T ss_dssp THHHHHHHHHHT
T ss_pred HHHHHHHHHhcC
Confidence 999999999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=2.4e-69 Score=515.43 Aligned_cols=233 Identities=28% Similarity=0.478 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHhhCcchhhhHHHhhhhccc-------ccCCCcceeccCCCCCccccccCCCCCchhhHHHHHHHHHHHH
Q 018847 42 NIIREVLQNAFLSDIRIGASLIRLHFHDCF-------VNGCDASILLDNTTTIDSEKFAAPNNNSARGFEVVDDMKAAVE 114 (349)
Q Consensus 42 ~iVr~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GcDaSill~~~~~~~~Ek~~~~N~~~~~g~~~Id~iK~~le 114 (349)
+.+|++|. .+.++|.++|.+|||+||||| ++||||||++. +|+++++|.++.+||++|++||+++
T Consensus 15 ~~~~~~~~-~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDLR-ALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHHH-HHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 45667774 466799999999999999999 89999999985 6999999996557999999999987
Q ss_pred hhCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccchhhhhcc
Q 018847 115 RACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSG 194 (349)
Q Consensus 115 ~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Glt~~~e~VaLsG 194 (349)
++|||||||+||||+||+++|||.|+|++||+|++++++ +++||+|+.+++++++.|+++||+++ |||||+|
T Consensus 87 ----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~-D~VaLsG 158 (289)
T PLN02608 87 ----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDK-DIVALSG 158 (289)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHH-HHhhhcc
Confidence 389999999999999999999999999999999999863 46899999999999999999999999 9999999
Q ss_pred ccccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhc--ccc--c
Q 018847 195 AHTFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKYFFNLQIS--KGL--L 270 (349)
Q Consensus 195 aHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~--~gl--L 270 (349)
|||||++||. |+ +|.|. + + .||.+|||+||++|+.+ +|+ |
T Consensus 159 AHTiG~ahc~----r~-g~~g~-------------------------~-----~-~Tp~~FDN~Yy~~ll~~~~~gll~L 202 (289)
T PLN02608 159 GHTLGRAHPE----RS-GFDGP-------------------------W-----T-KEPLKFDNSYFVELLKGESEGLLKL 202 (289)
T ss_pred cccccccccc----CC-CCCCC-------------------------C-----C-CCCCccChHHHHHHHcCCcCCcccc
Confidence 9999999994 54 44221 1 1 68999999999999998 787 7
Q ss_pred ccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCCCCCCCcccccccc
Q 018847 271 QSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGNLKPLTGNQGEIRSNCRR 328 (349)
Q Consensus 271 ~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~ 328 (349)
+|||+|+.|+ +|+++|++||.||++|+++|++||+||++|+|+||.+||+.+.-+.
T Consensus 203 ~SD~~L~~d~--~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~~ 258 (289)
T PLN02608 203 PTDKALLEDP--EFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTST 258 (289)
T ss_pred ccCHhhhcCh--hHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCcc
Confidence 9999999999 9999999999999999999999999999999999999999887643
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.6e-66 Score=490.30 Aligned_cols=231 Identities=26% Similarity=0.395 Sum_probs=209.5
Q ss_pred hHHHHHHHHHHHHHhhCcchhhhHHHhhhhcccccCCCcceeccC---CCCCccccccCCCCCchhhHHHHHHHHHHHHh
Q 018847 39 NVTNIIREVLQNAFLSDIRIGASLIRLHFHDCFVNGCDASILLDN---TTTIDSEKFAAPNNNSARGFEVVDDMKAAVER 115 (349)
Q Consensus 39 ~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDaSill~~---~~~~~~Ek~~~~N~~~~~g~~~Id~iK~~le~ 115 (349)
..++|||++|++.+. +++++|++|||+||||| +||+|+++++ +..+.+|+++++|.++.+||++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~--~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSG--TYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHh--ccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 567899999999999 99999999999999999 4888887754 333457999999996669999999999987
Q ss_pred hCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccchhhhhccc
Q 018847 116 ACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGA 195 (349)
Q Consensus 116 ~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Glt~~~e~VaLsGa 195 (349)
| +|||||||+||||+||+.+|||.|+|++||+|++++....++.+||.|+.++++|++.|+++||+++ |||||+||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~-d~VaLsGa 161 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQ-EIVALSGA 161 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHH-HHHHhccc
Confidence 4 8999999999999999999999999999999999998777778899999999999999999999999 99999999
Q ss_pred cccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhccc-------
Q 018847 196 HTFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKYFFNLQISKG------- 268 (349)
Q Consensus 196 HTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~g------- 268 (349)
||||++||.. ++|.|. |..||.+|||+||++|+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~-------------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP-------------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCCC-------------------------------CCCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999953 233221 115899999999999999999
Q ss_pred -ccccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCCC
Q 018847 269 -LLQSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGNLKPLT 316 (349)
Q Consensus 269 -lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~t 316 (349)
+|+||++|+.|+ +|+++|+.||.|+++|+++|++||+||++|||..
T Consensus 206 ~~L~sD~~L~~d~--~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 206 LMLPTDKALLEDP--KFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred eechhhHHHHcCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999 9999999999999999999999999999999863
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=4.2e-65 Score=479.33 Aligned_cols=232 Identities=28% Similarity=0.499 Sum_probs=208.5
Q ss_pred ccccc--CCChhHHHHHHHHHHHHHhhCcchhhhHHHhhhh-----ccccc--CCCcceeccCCCCCccccccCCCCCch
Q 018847 30 PFFYS--STCPNVTNIIREVLQNAFLSDIRIGASLIRLHFH-----DCFVN--GCDASILLDNTTTIDSEKFAAPNNNSA 100 (349)
Q Consensus 30 ~~fY~--~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FH-----Dcfv~--GcDaSill~~~~~~~~Ek~~~~N~~~~ 100 (349)
.+||. +-||.+++.+++.+++.+ .+++++|.||||+|| ||+++ ||||||.+ .+|+++++|.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~ 75 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIH 75 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHH
Confidence 45775 348999999999999988 689999999999999 88876 99999954 3799999999666
Q ss_pred hhHHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCccccccccCCCCCCCCHHHHHHHHHH
Q 018847 101 RGFEVVDDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRN 180 (349)
Q Consensus 101 ~g~~~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~ 180 (349)
+||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||.|+.++++|++.|++
T Consensus 76 ~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~ 147 (250)
T PLN02364 76 IALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAK 147 (250)
T ss_pred HHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHH
Confidence 9999999999998 489999999999999999999999999999999999864 46799999999999999997
Q ss_pred -cCCCccchhhhhccccccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHH
Q 018847 181 -VGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKY 259 (349)
Q Consensus 181 -~Glt~~~e~VaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Y 259 (349)
+||+++ |||||+||||||++|| .|+ +|.|. .+ .||.+|||+|
T Consensus 148 ~~Gl~~~-d~VaLsGaHTiG~~hc----~r~-~~~g~------------------------------~~-~tp~~fDn~Y 190 (250)
T PLN02364 148 QMGLSDK-DIVALSGAHTLGRCHK----DRS-GFEGA------------------------------WT-SNPLIFDNSY 190 (250)
T ss_pred hcCCCHH-HheeeecceeeccccC----CCC-CCCCC------------------------------CC-CCCCccchHH
Confidence 599999 9999999999999999 344 33221 12 6899999999
Q ss_pred HHHhhhc--ccccc--cccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCC
Q 018847 260 FFNLQIS--KGLLQ--SDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGNLKPL 315 (349)
Q Consensus 260 y~~l~~~--~glL~--SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 315 (349)
|++|+.+ +|+|. |||+|+.|+ +|+.+|+.||.|++.|+++|++||+||++||+-
T Consensus 191 y~~ll~~~~~gll~l~sD~~L~~d~--~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 191 FKELLSGEKEGLLQLVSDKALLDDP--VFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHHhcCCcCCCccccchHHHccCc--hHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999 89865 999999999 999999999999999999999999999999973
No 7
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=4.4e-63 Score=465.03 Aligned_cols=222 Identities=27% Similarity=0.455 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHhhCcchhhhHHHhhhhcccc-------cCCCcceeccCCCCCccccccCCCCCchhhHHHHHHHHHH
Q 018847 40 VTNIIREVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDASILLDNTTTIDSEKFAAPNNNSARGFEVVDDMKAA 112 (349)
Q Consensus 40 ~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDaSill~~~~~~~~Ek~~~~N~~~~~g~~~Id~iK~~ 112 (349)
..+-++..+.+.+. +...+|.+|||+||||.+ +||||||.+. .|+++++|.++..++++|++||++
T Consensus 16 ~~~~~~~~~~~~~~-~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~ 88 (251)
T PLN02879 16 AVQRCKRKLRGLIA-EKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKEL 88 (251)
T ss_pred HHHHHHHHHHHHHh-CCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHH
Confidence 34456778888774 679999999999999964 7999999864 799999999766699999999999
Q ss_pred HHhhCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccchhhhh
Q 018847 113 VERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVAL 192 (349)
Q Consensus 113 le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Glt~~~e~VaL 192 (349)
+ ++|||||||+||+|+||+.+|||.|+|++||+|+..+.+ +++||.|+.++++|++.|+++||+++ |||||
T Consensus 89 ~-----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~-dlVAL 159 (251)
T PLN02879 89 F-----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDK-DIVAL 159 (251)
T ss_pred c-----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHH-HHeee
Confidence 8 489999999999999999999999999999999998753 46899999999999999999999999 99999
Q ss_pred ccccccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhc--ccc-
Q 018847 193 SGAHTFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKYFFNLQIS--KGL- 269 (349)
Q Consensus 193 sGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~--~gl- 269 (349)
|||||||++||. | ++|.|. +| .||.+|||+||++|+.+ +|+
T Consensus 160 sGaHTiG~ah~~----r-~g~~g~------------------------------~d-~tp~~FDN~Yy~~ll~~~~~gll 203 (251)
T PLN02879 160 SGGHTLGRCHKE----R-SGFEGA------------------------------WT-PNPLIFDNSYFKEILSGEKEGLL 203 (251)
T ss_pred eccccccccccc----c-ccCCCC------------------------------CC-CCccceeHHHHHHHHcCCcCCCc
Confidence 999999999995 3 344321 23 58999999999999999 887
Q ss_pred -cccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCC
Q 018847 270 -LQSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGNLKPL 315 (349)
Q Consensus 270 -L~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 315 (349)
|+||++|+.|| +|+++|++||.||++|+++|++||+||++||+.
T Consensus 204 ~L~SD~aL~~D~--~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 204 QLPTDKALLDDP--LFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred cchhhHHHhcCC--cHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 68999999999 999999999999999999999999999999975
No 8
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.7e-62 Score=475.92 Aligned_cols=240 Identities=27% Similarity=0.398 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHHHhhCc---chhhhHHHhhhhcccc------------cCCCcceeccCCCCCccccccCCCCCchhhHH
Q 018847 40 VTNIIREVLQNAFLSDI---RIGASLIRLHFHDCFV------------NGCDASILLDNTTTIDSEKFAAPNNNSARGFE 104 (349)
Q Consensus 40 ~e~iVr~~v~~~~~~~~---~~aa~llRL~FHDcfv------------~GcDaSill~~~~~~~~Ek~~~~N~~~~~g~~ 104 (349)
+|..|+++|++.+..+. ..|+.+|||+||||++ +|||||||++.+ .|+++++|.+ ++ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~g-L~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIG-LD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCC-HH--H
Confidence 68899999999998554 4677799999999996 799999999742 6999999984 45 8
Q ss_pred HHHHHHHHHHhhCCCCcCHHHHHHHhhhhHHhh-cCCCCceeccCcCCCCCccccccccCCCCCCCCHHHHHHHHHHcCC
Q 018847 105 VVDDMKAAVERACPGVVSCADILTIAAEESVAL-SGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGL 183 (349)
Q Consensus 105 ~Id~iK~~le~~cp~~VScADilalAardAV~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 183 (349)
+|+.||..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 99999999999999995 59999999999999998864 45899999999999999999999
Q ss_pred CccchhhhhccccccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHh
Q 018847 184 NDNFDLVALSGAHTFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKYFFNL 263 (349)
Q Consensus 184 t~~~e~VaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l 263 (349)
+++ |||+|+||||||++|. +||+++ ..++| .||.+|||+||+++
T Consensus 163 ~~~-E~VaLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~l 206 (328)
T cd00692 163 SPD-ELVALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFFIET 206 (328)
T ss_pred CHH-HHhhhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHHHHH
Confidence 999 9999999999999982 366664 13578 69999999999998
Q ss_pred h-hccc-------------------ccccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhcCCCCCCCCCccc
Q 018847 264 Q-ISKG-------------------LLQSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGNLKPLTGNQGEIR 323 (349)
Q Consensus 264 ~-~~~g-------------------lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR 323 (349)
+ .+++ +|+||++|+.|+ +|+.+|++||.||++|+++|++||+||++|||.. ..+
T Consensus 207 l~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~--~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~~----~~l 280 (328)
T cd00692 207 LLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDP--RTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQDN----ISL 280 (328)
T ss_pred HHcCCCCCCccccccccccCccccccccchHHHhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCc----chh
Confidence 7 5555 499999999999 9999999999999999999999999999999873 478
Q ss_pred cccccccCCCc
Q 018847 324 SNCRRVNGNSN 334 (349)
Q Consensus 324 ~~C~~~n~~~~ 334 (349)
.+|+.|++.+.
T Consensus 281 ~dcs~v~p~~~ 291 (328)
T cd00692 281 TDCSDVIPPPK 291 (328)
T ss_pred ccCcccCCCCC
Confidence 99999996543
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=3.1e-59 Score=441.19 Aligned_cols=224 Identities=33% Similarity=0.504 Sum_probs=206.7
Q ss_pred HHHHHHHHHHhhCcchhhhHHHhhhhccccc--------CCCcceeccCCCCCccccccCCCCCchhhHHHHHHHHHHHH
Q 018847 43 IIREVLQNAFLSDIRIGASLIRLHFHDCFVN--------GCDASILLDNTTTIDSEKFAAPNNNSARGFEVVDDMKAAVE 114 (349)
Q Consensus 43 iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~--------GcDaSill~~~~~~~~Ek~~~~N~~~~~g~~~Id~iK~~le 114 (349)
.|++.|++.+.+++.+++++|||+||||++. ||||||+++ +|+++++|.++.+++++|+.||.++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999996 999999997 49999999977799999999999999
Q ss_pred hhCCCCcCHHHHHHHhhhhHHhhc--CCCCceeccCcCCCCCcc--ccccccCCCCCCCCHHHHHHHHHHcCCCccchhh
Q 018847 115 RACPGVVSCADILTIAAEESVALS--GGPAWTNLLGRRDSRTAN--RTLANENLPGPNNSLERLKDRFRNVGLNDNFDLV 190 (349)
Q Consensus 115 ~~cp~~VScADilalAardAV~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Glt~~~e~V 190 (349)
. |++|||||||+||+++||+.+ |||.|+|++||+|++.+. ...+..++|.|..+++++++.|+++||+++ |||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~-e~V 152 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPS-ELV 152 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHH-HHH
Confidence 8 899999999999999999999 999999999999999764 333456788888899999999999999999 999
Q ss_pred hhc-ccccc-ccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhcc-
Q 018847 191 ALS-GAHTF-GRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKYFFNLQISK- 267 (349)
Q Consensus 191 aLs-GaHTi-G~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~- 267 (349)
||+ ||||| |++||..+..|+ | .+|..||.+|||+||++|+.++
T Consensus 153 AL~~GaHti~G~~~~~~~~~~~------------------------~----------~~~~~tp~~fDN~yy~~l~~~~~ 198 (255)
T cd00314 153 ALSAGAHTLGGKNHGDLLNYEG------------------------S----------GLWTSTPFTFDNAYFKNLLDMNW 198 (255)
T ss_pred hhccCCeeccCcccCCCCCccc------------------------C----------CCCCCCCCccchHHHHHHhcCCc
Confidence 999 99999 999998876654 2 1345899999999999999998
Q ss_pred ---------------cccccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhc
Q 018847 268 ---------------GLLQSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGN 311 (349)
Q Consensus 268 ---------------glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 311 (349)
++|+||++|+.|+ +|+.+|++||.|+++|+++|++||+||++
T Consensus 199 ~~~~~~~~~~~~~~~~~l~sD~~L~~d~--~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 199 EWRVGSPDPDGVKGPGLLPSDYALLSDS--ETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred ccccCCccCCCcccCCCchhhHHHhcCH--hHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 8999999999999 99999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.4e-56 Score=441.45 Aligned_cols=273 Identities=21% Similarity=0.324 Sum_probs=236.0
Q ss_pred CCccc-ccCCChhHH-HHHHHHHHHHHhhC--------cchhhhHHHhhhhcccc-------cCCC-cceeccCCCCCcc
Q 018847 28 LSPFF-YSSTCPNVT-NIIREVLQNAFLSD--------IRIGASLIRLHFHDCFV-------NGCD-ASILLDNTTTIDS 89 (349)
Q Consensus 28 l~~~f-Y~~sCP~~e-~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-aSill~~~~~~~~ 89 (349)
+-.+| |.+.+-+.. +.|+++|++.+... ...+|.+|||+|||+.+ +|++ |+|.+. +
T Consensus 29 ~~~~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------p 102 (409)
T cd00649 29 MGEDFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------P 102 (409)
T ss_pred CCCCCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------c
Confidence 44444 454444443 78999999999864 47999999999999986 6886 788775 7
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCcccc-----------
Q 018847 90 EKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRT----------- 158 (349)
Q Consensus 90 Ek~~~~N~~~~~g~~~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~----------- 158 (349)
|++++.|.++.+++.+++.||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 103 e~~~~~N~gL~~a~~~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~ 178 (409)
T cd00649 103 LNSWPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLA 178 (409)
T ss_pred ccCcHhhhhHHHHHHHHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhccc
Confidence 999999998889999999999988 45799999999999999999999999999999999764320
Q ss_pred ------------------------cccc--CCCCCCCCHHHHHHHHHHcCCCccchhhhh-ccccccccccccccccccc
Q 018847 159 ------------------------LANE--NLPGPNNSLERLKDRFRNVGLNDNFDLVAL-SGAHTFGRAQCRTFSDRLF 211 (349)
Q Consensus 159 ------------------------~~~~--~lP~p~~~~~~l~~~F~~~Glt~~~e~VaL-sGaHTiG~~hc~~f~~Rl~ 211 (349)
.+++ .||+|..++.+|++.|.+|||+++ ||||| +||||||++||..|.+||.
T Consensus 179 ~~~~~~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~-E~VAL~sGAHTiGkaHc~~~~~rlg 257 (409)
T cd00649 179 DKRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASHVG 257 (409)
T ss_pred ccccccchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHH-HHeeeccCCcceeecCcccccccCC
Confidence 1122 699999999999999999999999 99999 5999999999999999982
Q ss_pred cCCCCCCCCCCCcHHHHHHHH--hhCCCCCC-CCcccccC---CCCCcccChHHHHHhhh--------------------
Q 018847 212 NFNNTGNPDPTLNTTLLQQLR--QLCPQGGN-GSVLTNLD---VTTPDLFDNKYFFNLQI-------------------- 265 (349)
Q Consensus 212 ~f~g~~~~dp~~d~~~~~~L~--~~Cp~~~~-~~~~~~lD---~~Tp~~FDN~Yy~~l~~-------------------- 265 (349)
+||.+++.|++.|+ ..||...+ +.....+| ..||.+|||+||++|+.
T Consensus 258 -------~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~ 330 (409)
T cd00649 258 -------PEPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNA 330 (409)
T ss_pred -------CCCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCc
Confidence 69999999999995 89997433 33455687 47999999999999998
Q ss_pred ----------------cccccccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHh--hcCCCCCCCCC
Q 018847 266 ----------------SKGLLQSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRM--GNLKPLTGNQG 320 (349)
Q Consensus 266 ----------------~~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 320 (349)
+++||+||++|+.|| +|+++|++||.|+++|+++|++||+|| +.+|+++-..|
T Consensus 331 ~~~~~~~d~~~~~~~~~~gmL~SD~aL~~Dp--~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 331 AGENTVPDAHDPSKKHAPMMLTTDLALRFDP--EYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cccccCCCccccccccCcccchhhHhhhcCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 568999999999999 999999999999999999999999999 58999986555
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=8.8e-54 Score=445.25 Aligned_cols=271 Identities=21% Similarity=0.308 Sum_probs=230.3
Q ss_pred CCccc-ccCCChhH-HHHHHHHHHHHHhhC--------cchhhhHHHhhhhcccc-------cCC-CcceeccCCCCCcc
Q 018847 28 LSPFF-YSSTCPNV-TNIIREVLQNAFLSD--------IRIGASLIRLHFHDCFV-------NGC-DASILLDNTTTIDS 89 (349)
Q Consensus 28 l~~~f-Y~~sCP~~-e~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~Gc-DaSill~~~~~~~~ 89 (349)
+-.+| |.+.+-+. .+.||++|++.+... ...+|.+|||+||++.+ +|| .|+|.+. +
T Consensus 39 ~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P 112 (716)
T TIGR00198 39 MGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------P 112 (716)
T ss_pred CCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------c
Confidence 44444 55444333 257999999999864 47999999999999987 577 4888775 7
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCccc------------
Q 018847 90 EKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANR------------ 157 (349)
Q Consensus 90 Ek~~~~N~~~~~g~~~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~------------ 157 (349)
|++++.|.++.+++.++++||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+..
T Consensus 113 ~~sw~~N~~Ldka~~lL~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~ 188 (716)
T TIGR00198 113 LNSWPDNVNLDKARRLLWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLT 188 (716)
T ss_pred ccCchhhhhHHHHHHHHHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhh
Confidence 99999999888999999999874 68999999999999999999999999999999999943320
Q ss_pred --------------c----------ccccCCCCCCCCHHHHHHHHHHcCCCccchhhhhc-ccccccccccccccccccc
Q 018847 158 --------------T----------LANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS-GAHTFGRAQCRTFSDRLFN 212 (349)
Q Consensus 158 --------------~----------~~~~~lP~p~~~~~~l~~~F~~~Glt~~~e~VaLs-GaHTiG~~hc~~f~~Rl~~ 212 (349)
. +....+|+|..++.+|++.|.+||||++ |||||+ ||||||++||.+|.+||
T Consensus 189 ~~~~~~~~l~~p~a~~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~-EmVALiaGaHTiGkaHc~s~~~rl-- 265 (716)
T TIGR00198 189 SSREDRESLENPLAATEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDE-ETVALIAGGHTVGKCHGAGPAELI-- 265 (716)
T ss_pred ccccccccccccchhhhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChH-HHeeeecCceeccccCCCcccccC--
Confidence 0 1122699999999999999999999999 999996 99999999999999998
Q ss_pred CCCCCCCCCCCcHHHHHHHHhhCCCCC---CCCcccccC---CCCCcccChHHHHHhhhc--------------------
Q 018847 213 FNNTGNPDPTLNTTLLQQLRQLCPQGG---NGSVLTNLD---VTTPDLFDNKYFFNLQIS-------------------- 266 (349)
Q Consensus 213 f~g~~~~dp~~d~~~~~~L~~~Cp~~~---~~~~~~~lD---~~Tp~~FDN~Yy~~l~~~-------------------- 266 (349)
.+||++++.|++.|++.||... ++...+.+| ..||.+|||+||+||+.+
T Consensus 266 -----g~dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~ 340 (716)
T TIGR00198 266 -----GPDPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAP 340 (716)
T ss_pred -----CCCCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccc
Confidence 2799999999999999999532 222346677 579999999999999975
Q ss_pred --------------ccccccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhh--cCCCCCCC
Q 018847 267 --------------KGLLQSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMG--NLKPLTGN 318 (349)
Q Consensus 267 --------------~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg~ 318 (349)
.++|+||++|+.|| +|+++|++||.|+++|+++|++||+||+ .+|++.-.
T Consensus 341 ~~~p~~~~~~~~~~~~mL~SDlaL~~Dp--~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~y 406 (716)
T TIGR00198 341 EIIPDVEDPNKKHNPIMLDADLALRFDP--EFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSRY 406 (716)
T ss_pred cccccccccccccccCccchhHHhccCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhhh
Confidence 68999999999999 9999999999999999999999999999 46665533
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2e-50 Score=418.18 Aligned_cols=273 Identities=21% Similarity=0.323 Sum_probs=231.5
Q ss_pred CCccc-ccCCChhH-HHHHHHHHHHHHhhC--------cchhhhHHHhhhhcccc-------cCCC-cceeccCCCCCcc
Q 018847 28 LSPFF-YSSTCPNV-TNIIREVLQNAFLSD--------IRIGASLIRLHFHDCFV-------NGCD-ASILLDNTTTIDS 89 (349)
Q Consensus 28 l~~~f-Y~~sCP~~-e~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-aSill~~~~~~~~ 89 (349)
+-.+| |.+.+-.. .+.||++|.+.+... ...+|.+|||+||++.+ +||+ |+|.+. +
T Consensus 41 ~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------p 114 (726)
T PRK15061 41 MGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------P 114 (726)
T ss_pred CCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------c
Confidence 44444 55444333 357999999999864 47999999999999987 6885 787665 7
Q ss_pred ccccCCCCCchhhHHHHHHHHHHHHhhCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCcccc-----------
Q 018847 90 EKFAAPNNNSARGFEVVDDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRT----------- 158 (349)
Q Consensus 90 Ek~~~~N~~~~~g~~~Id~iK~~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~----------- 158 (349)
|++++.|.++.+++.++++||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 115 e~~w~~N~gL~ka~~~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~ 190 (726)
T PRK15061 115 LNSWPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLG 190 (726)
T ss_pred cccchhhhhHHHHHHHHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccc
Confidence 999999998889999999999998 45799999999999999999999999999999998654321
Q ss_pred ---------------------------ccccCCCCCCCCHHHHHHHHHHcCCCccchhhhhc-ccccccccccccccccc
Q 018847 159 ---------------------------LANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS-GAHTFGRAQCRTFSDRL 210 (349)
Q Consensus 159 ---------------------------~~~~~lP~p~~~~~~l~~~F~~~Glt~~~e~VaLs-GaHTiG~~hc~~f~~Rl 210 (349)
+-...+|+|..++.+|++.|.+|||+++ |||||+ ||||||++||..|.+||
T Consensus 191 ~~~r~~~~~~l~~pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDe-EtVALiaGgHT~GkaHca~~~~rl 269 (726)
T PRK15061 191 GDERYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGDASHV 269 (726)
T ss_pred cccccccccccccchhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHH-HheeeccCCceeeeCCCcCccccc
Confidence 0012379999999999999999999999 999995 99999999999999998
Q ss_pred ccCCCCCCCCCCCcHHHHHHHH--hhCCCCCC-CCcccccC---CCCCcccChHHHHHhhhc------------------
Q 018847 211 FNFNNTGNPDPTLNTTLLQQLR--QLCPQGGN-GSVLTNLD---VTTPDLFDNKYFFNLQIS------------------ 266 (349)
Q Consensus 211 ~~f~g~~~~dp~~d~~~~~~L~--~~Cp~~~~-~~~~~~lD---~~Tp~~FDN~Yy~~l~~~------------------ 266 (349)
.+||.+++.|++.|. ..||...+ +.....+| ..||.+|||+||++|+.+
T Consensus 270 -------gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~ 342 (726)
T PRK15061 270 -------GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKD 342 (726)
T ss_pred -------CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccC
Confidence 279999999999985 99997433 33455677 579999999999999985
Q ss_pred ------------------ccccccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhc--CCCCCCCCC
Q 018847 267 ------------------KGLLQSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGN--LKPLTGNQG 320 (349)
Q Consensus 267 ------------------~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~--lgv~tg~~G 320 (349)
.+||+||++|+.|| +|+++|++||.|+++|+++|++||.||++ +|+++-.-|
T Consensus 343 ~~~~~~~pd~~~~~~~~~~~MLtSD~AL~~DP--~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 343 GAAEDTVPDAHDPSKKHAPTMLTTDLALRFDP--EYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred ccccccCCcccccccccCcccccccHHhhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 58999999999999 99999999999999999999999999955 666654333
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=5e-49 Score=369.95 Aligned_cols=213 Identities=26% Similarity=0.332 Sum_probs=175.5
Q ss_pred HHHhhCcchhhhHHHhhhhccc-------ccCCCcceeccCCCCCccccc-cCCCCCchhhHHHHHHHHHHHHhhCCCCc
Q 018847 50 NAFLSDIRIGASLIRLHFHDCF-------VNGCDASILLDNTTTIDSEKF-AAPNNNSARGFEVVDDMKAAVERACPGVV 121 (349)
Q Consensus 50 ~~~~~~~~~aa~llRL~FHDcf-------v~GcDaSill~~~~~~~~Ek~-~~~N~~~~~g~~~Id~iK~~le~~cp~~V 121 (349)
.....++++++.+|||+||||| ++||||||+++.. .+|+. .+.|. .+++|+.|+.+ +|
T Consensus 33 ~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~-~l~~~~~i~~~----------~V 98 (264)
T cd08201 33 CAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNT-TLNFFVNFYSP----------RS 98 (264)
T ss_pred cCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhh-ccccceeeccC----------cc
Confidence 3445789999999999999999 8999999999742 46776 44454 56788877543 69
Q ss_pred CHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCccchhhhhcc-cccccc
Q 018847 122 SCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSG-AHTFGR 200 (349)
Q Consensus 122 ScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Glt~~~e~VaLsG-aHTiG~ 200 (349)
|||||||||+|+||+.+|||.|+|++||+|++.+.+. .||.|+.++++|++.|+++||+++ |||+||| |||||+
T Consensus 99 ScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~-DmVaLsggaHTiG~ 173 (264)
T cd08201 99 SMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTS-EMIALVACGHTLGG 173 (264)
T ss_pred CHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChH-HHheeecCCeeeee
Confidence 9999999999999999999999999999999988753 499999999999999999999999 9999995 999999
Q ss_pred ccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcccChHHHHHhhhccc----------cc
Q 018847 201 AQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDLFDNKYFFNLQISKG----------LL 270 (349)
Q Consensus 201 ~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDN~Yy~~l~~~~g----------lL 270 (349)
+||..|.++.- |.. ..+...++| .||.+|||+||.+++.+.. -+
T Consensus 174 ahc~~f~~~~~---------~g~----------------~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~~ 227 (264)
T cd08201 174 VHSEDFPEIVP---------PGS----------------VPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNTT 227 (264)
T ss_pred cccccchhhcC---------Ccc----------------ccCCCCCCC-CCccccchHHHHHHhcCCCCCceeecCCCCc
Confidence 99998876531 100 001233566 6999999999999998753 37
Q ss_pred ccccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhc
Q 018847 271 QSDQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGN 311 (349)
Q Consensus 271 ~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 311 (349)
.||..++...++.|. +..| +++.|.+..+..++||.+
T Consensus 228 ~sd~r~f~~d~n~t~---~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 228 NSDLRIFSSDGNVTM---NELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred cchhhheecCccHHH---HHhc-ChHHHHHHHHHHHHHHhC
Confidence 899999987644453 5566 789999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.6e-39 Score=309.20 Aligned_cols=221 Identities=20% Similarity=0.259 Sum_probs=181.1
Q ss_pred HHHHHHHhhCcchhhhHHHhhhhcccc-------cCCCcc-eeccCCCCCccccccCCCCC--chhhHHHHHHHHHHHHh
Q 018847 46 EVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDNTTTIDSEKFAAPNNN--SARGFEVVDDMKAAVER 115 (349)
Q Consensus 46 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDaS-ill~~~~~~~~Ek~~~~N~~--~~~g~~~Id~iK~~le~ 115 (349)
+.+++.+....-.++.||||+||++.+ +|++|+ |.|. +|++++.|.+ +.+.+.++++||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~------pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA------PQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc------cccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 567777777778899999999999986 699888 7665 7999999998 77899999999999842
Q ss_pred -hCC-CCcCHHHHHHHhhhhHHhhcCC-----CCceeccCcCCCCCcccccc--ccCCCCCC------------CCHHHH
Q 018847 116 -ACP-GVVSCADILTIAAEESVALSGG-----PAWTNLLGRRDSRTANRTLA--NENLPGPN------------NSLERL 174 (349)
Q Consensus 116 -~cp-~~VScADilalAardAV~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 174 (349)
.-+ ..||+||+|+||+..|||.+|| |.|++.+||.|.+.+..... ...+|.+. ...+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 112 2699999999999999999999 99999999999987643211 11345332 235789
Q ss_pred HHHHHHcCCCccchhhhhcccc-ccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCc
Q 018847 175 KDRFRNVGLNDNFDLVALSGAH-TFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPD 253 (349)
Q Consensus 175 ~~~F~~~Glt~~~e~VaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~ 253 (349)
++.|.++||+++ |||||+||| ++|++|..+ +.| .++ .+|.
T Consensus 171 rd~f~rlglsd~-EmvaL~Gg~r~lG~~~~~s-------~~G-------------------------~wT------~~p~ 211 (297)
T cd08200 171 VDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHG-------------------------VFT------DRPG 211 (297)
T ss_pred HHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCC-------------------------CCc------CCCC
Confidence 999999999999 999999997 799888432 112 122 5899
Q ss_pred ccChHHHHHhhhcc--------------------c-----ccccccccccCCccchHHHHHHhhhC--HHHHHHHHHHHH
Q 018847 254 LFDNKYFFNLQISK--------------------G-----LLQSDQELFSTPGADTTAIVNVFSSN--QAAFFKSFVISM 306 (349)
Q Consensus 254 ~FDN~Yy~~l~~~~--------------------g-----lL~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~Am 306 (349)
+|||.||+||++.. | .+++|..|..|+ +.|++|+.||.| +++|++||++||
T Consensus 212 ~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~--~~R~~ve~YA~dd~~~~F~~DF~~A~ 289 (297)
T cd08200 212 VLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRAVAEVYASDDAQEKFVKDFVAAW 289 (297)
T ss_pred ccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCH--HHHHHHHHHhcccchhHHHHHHHHHH
Confidence 99999999999521 1 268899999999 999999999998 999999999999
Q ss_pred HHhhcCC
Q 018847 307 IRMGNLK 313 (349)
Q Consensus 307 ~Km~~lg 313 (349)
.||+++.
T Consensus 290 ~Klmeld 296 (297)
T cd08200 290 TKVMNLD 296 (297)
T ss_pred HHHHhcC
Confidence 9999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.7e-34 Score=301.10 Aligned_cols=221 Identities=21% Similarity=0.270 Sum_probs=177.9
Q ss_pred HHHHHHHHH---HhhCcchhhhHHHhhhhcccc-------cCCCcc-eeccCCCCCccccccCCC--CCchhhHHHHHHH
Q 018847 43 IIREVLQNA---FLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDNTTTIDSEKFAAPN--NNSARGFEVVDDM 109 (349)
Q Consensus 43 iVr~~v~~~---~~~~~~~aa~llRL~FHDcfv-------~GcDaS-ill~~~~~~~~Ek~~~~N--~~~~~g~~~Id~i 109 (349)
+|+++|..+ +....-.++.|||++||++.+ +|++|+ |.|. +|++++.| .++.+.+.+++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 446655554 455667789999999999986 699988 7776 79999999 7778899999999
Q ss_pred HHHHHhhCCCCcCHHHHHHHhhhhHHhhc---CCC--CceeccCcCCCCCccccccccCC---CCC------------CC
Q 018847 110 KAAVERACPGVVSCADILTIAAEESVALS---GGP--AWTNLLGRRDSRTANRTLANENL---PGP------------NN 169 (349)
Q Consensus 110 K~~le~~cp~~VScADilalAardAV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~l---P~p------------~~ 169 (349)
|+++.. ..||.||+|+||+..|||.+ ||| .|++.+||.|.+..... ++... |.+ ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td-~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTD-AESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCC-ccccccCCCCCcccchhccccccCC
Confidence 998842 27999999999999999999 998 57888999999876432 22222 211 12
Q ss_pred CHHHHHHHHHHcCCCccchhhhhccc-cccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccC
Q 018847 170 SLERLKDRFRNVGLNDNFDLVALSGA-HTFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLD 248 (349)
Q Consensus 170 ~~~~l~~~F~~~Glt~~~e~VaLsGa-HTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD 248 (349)
....|++.|.++|||++ |||||+|| |++|++|..+ +.| .++
T Consensus 579 ~~~~l~d~a~~lglt~~-EmvaL~Gg~r~lG~~~~~s-------~~G-------------------------~~T----- 620 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAP-EMTVLIGGMRVLGANHGGS-------KHG-------------------------VFT----- 620 (716)
T ss_pred HHHHHHHHHHhCCCChH-HHHheecchhhccccCCCC-------CCC-------------------------CCc-----
Confidence 36778899999999999 99999998 5999998532 112 121
Q ss_pred CCCCcccChHHHHHhhhcc--------------------c---cc--ccccccccCCccchHHHHHHhhhCH--HHHHHH
Q 018847 249 VTTPDLFDNKYFFNLQISK--------------------G---LL--QSDQELFSTPGADTTAIVNVFSSNQ--AAFFKS 301 (349)
Q Consensus 249 ~~Tp~~FDN~Yy~~l~~~~--------------------g---lL--~SD~~L~~d~~~~t~~~V~~yA~d~--~~F~~~ 301 (349)
.+|.+|||.||+||++.. | ++ ++|..|..|+ +.|++|+.||.|+ ++|++|
T Consensus 621 -~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~--~lra~aE~YA~dd~~~~F~~D 697 (716)
T TIGR00198 621 -DRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNS--ILRAVAEVYAQDDAREKFVKD 697 (716)
T ss_pred -CCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCH--HHHHHHHHHhcccccchHHHH
Confidence 589999999999999721 1 22 7799999999 9999999999997 899999
Q ss_pred HHHHHHHhhcCCC
Q 018847 302 FVISMIRMGNLKP 314 (349)
Q Consensus 302 Fa~Am~Km~~lgv 314 (349)
|++||.|+++++-
T Consensus 698 F~~Aw~Klm~ldr 710 (716)
T TIGR00198 698 FVAAWTKVMNLDR 710 (716)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999873
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=9.6e-34 Score=294.17 Aligned_cols=220 Identities=20% Similarity=0.277 Sum_probs=181.4
Q ss_pred HHHHHHHhhCcchhhhHHHhhhhcccc-------cCCCcc-eeccCCCCCccccccCCCC--CchhhHHHHHHHHHHHHh
Q 018847 46 EVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCDAS-ILLDNTTTIDSEKFAAPNN--NSARGFEVVDDMKAAVER 115 (349)
Q Consensus 46 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDaS-ill~~~~~~~~Ek~~~~N~--~~~~g~~~Id~iK~~le~ 115 (349)
..+++.+....-..|.|||++||++.+ +|++|+ |.|. +|++++.|. ++.+.+++++.||+++..
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 566777777777899999999999986 699988 8776 799999998 777899999999999864
Q ss_pred hC--CCCcCHHHHHHHhhhhHHhhc---CC--CCceeccCcCCCCCccccccc---cCCCCCC------------CCHHH
Q 018847 116 AC--PGVVSCADILTIAAEESVALS---GG--PAWTNLLGRRDSRTANRTLAN---ENLPGPN------------NSLER 173 (349)
Q Consensus 116 ~c--p~~VScADilalAardAV~~~---GG--P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~~ 173 (349)
.- ...||.||+|+||+..|||.+ || |.|++.+||.|.+..... ++ ..+|.+. .....
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td-~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTD-VESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCC-cccccccCCCCccccccccccCCCCHHHH
Confidence 32 236999999999999999999 68 999999999999875432 22 2456543 13488
Q ss_pred HHHHHHHcCCCccchhhhhcccc-ccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCC
Q 018847 174 LKDRFRNVGLNDNFDLVALSGAH-TFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTP 252 (349)
Q Consensus 174 l~~~F~~~Glt~~~e~VaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp 252 (349)
|++.|.++|||++ |||||+||| ++|++|..++ .| .++ .+|
T Consensus 595 L~d~a~~lglt~~-EmvaL~Gg~r~Lg~~~~~S~-------~G-------------------------~~T------~~p 635 (726)
T PRK15061 595 LVDKAQLLTLTAP-EMTVLVGGLRVLGANYGGSK-------HG-------------------------VFT------DRP 635 (726)
T ss_pred HHHHHHhCCCChH-HHhheecchhhcccCCCCCC-------CC-------------------------CCc------CCC
Confidence 9999999999999 999999997 7898884321 11 121 579
Q ss_pred cccChHHHHHhhhcc--------------------c---c--cccccccccCCccchHHHHHHhhhC--HHHHHHHHHHH
Q 018847 253 DLFDNKYFFNLQISK--------------------G---L--LQSDQELFSTPGADTTAIVNVFSSN--QAAFFKSFVIS 305 (349)
Q Consensus 253 ~~FDN~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~A 305 (349)
.+|||.||+||++.. | + +++|..|..|+ +.|++|+.||.| +++|++||++|
T Consensus 636 ~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds--~lRa~aEvYA~dd~~~kF~~DF~~A 713 (726)
T PRK15061 636 GVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNS--QLRALAEVYASDDAKEKFVRDFVAA 713 (726)
T ss_pred CccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCH--HHHHHHHHHhcccchhHHHHHHHHH
Confidence 999999999999521 1 2 47899999999 999999999999 99999999999
Q ss_pred HHHhhcCC
Q 018847 306 MIRMGNLK 313 (349)
Q Consensus 306 m~Km~~lg 313 (349)
|.|+++++
T Consensus 714 w~Kvmeld 721 (726)
T PRK15061 714 WTKVMNLD 721 (726)
T ss_pred HHHHHhCC
Confidence 99999987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.4e-31 Score=266.96 Aligned_cols=258 Identities=20% Similarity=0.266 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHhhC--------cchhhhHHHhhhhccccc-CCCcceec-cCCCCCccccccCCCCCchhhHHHHHHHHH
Q 018847 42 NIIREVLQNAFLSD--------IRIGASLIRLHFHDCFVN-GCDASILL-DNTTTIDSEKFAAPNNNSARGFEVVDDMKA 111 (349)
Q Consensus 42 ~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv~-GcDaSill-~~~~~~~~Ek~~~~N~~~~~g~~~Id~iK~ 111 (349)
..|+.++...+... ...+|.+|||+||-+++. =-||.--- .+..++.++.++|.|.++.+++.++.+||+
T Consensus 70 ~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~nLDKarRLLWPIKk 149 (730)
T COG0376 70 AAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNANLDKARRLLWPIKK 149 (730)
T ss_pred HHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCcccchHHHHHHhhhHhH
Confidence 35667777777654 358999999999999872 11111100 123456688999999999999999999999
Q ss_pred HHHhhCCCCcCHHHHHHHhhhhHHhhcCCCCceeccCcCCCCCcccc---------------------------------
Q 018847 112 AVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRT--------------------------------- 158 (349)
Q Consensus 112 ~le~~cp~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~~--------------------------------- 158 (349)
++ +..+|+||+|+|++..|++.+|+++|.+..||.|-..+...
T Consensus 150 KY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGLI 225 (730)
T COG0376 150 KY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGLI 225 (730)
T ss_pred hh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeeeE
Confidence 98 56899999999999999999999999999999998776540
Q ss_pred ----ccccCCCCCCCCHHHHHHHHHHcCCCccchhhhhc-cccccccccccccccccccCCCCCCCCCCCcHHHHHHHH-
Q 018847 159 ----LANENLPGPNNSLERLKDRFRNVGLNDNFDLVALS-GAHTFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLR- 232 (349)
Q Consensus 159 ----~~~~~lP~p~~~~~~l~~~F~~~Glt~~~e~VaLs-GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~- 232 (349)
+-++..|+|..+..+++..|++|+|+++ |+|||+ ||||+|++|...-.+.+ .++|.-.+--.+.|-
T Consensus 226 YVNPEGpng~PDpl~aA~dIRetFaRMaMNDe-ETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie~qGlGW 297 (730)
T COG0376 226 YVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIEQQGLGW 297 (730)
T ss_pred EeCCCCCCCCCChhhhHHHHHHHHHHhcCCcH-hhhhhhhcccccccccCCCchhhc-------CCCccccchhhhcccc
Confidence 1124578899999999999999999999 999998 69999999976532222 367766666666664
Q ss_pred -hhCCCCCCC-Cc---ccccCCCCCcccChHHHHHhhhcc-----------------------------------ccccc
Q 018847 233 -QLCPQGGNG-SV---LTNLDVTTPDLFDNKYFFNLQISK-----------------------------------GLLQS 272 (349)
Q Consensus 233 -~~Cp~~~~~-~~---~~~lD~~Tp~~FDN~Yy~~l~~~~-----------------------------------glL~S 272 (349)
..|-.+.+. .. ....+..||++|||.||.+|+... .||++
T Consensus 298 ~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Mltt 377 (730)
T COG0376 298 ANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTT 377 (730)
T ss_pred ccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeecc
Confidence 334333222 11 223455799999999999998631 58999
Q ss_pred ccccccCCccchHHHHHHhhhCHHHHHHHHHHHHHHhhcCC
Q 018847 273 DQELFSTPGADTTAIVNVFSSNQAAFFKSFVISMIRMGNLK 313 (349)
Q Consensus 273 D~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 313 (349)
|.+|..|| ..++|.++|..|++.|.+.|++||.||.+-+
T Consensus 378 DlaLr~DP--~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 378 DLALRFDP--EYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred chhhhcCh--HHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 99999999 9999999999999999999999999999854
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.47 E-value=3.7e-13 Score=135.81 Aligned_cols=216 Identities=22% Similarity=0.294 Sum_probs=158.7
Q ss_pred HHHHHHHhhCcchhhhHHHhhhhcccc-------cCCC-cceeccCCCCCccccccCCCCC--chhhHHHHHHHHHHHHh
Q 018847 46 EVLQNAFLSDIRIGASLIRLHFHDCFV-------NGCD-ASILLDNTTTIDSEKFAAPNNN--SARGFEVVDDMKAAVER 115 (349)
Q Consensus 46 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcD-aSill~~~~~~~~Ek~~~~N~~--~~~g~~~Id~iK~~le~ 115 (349)
..++..+....-....|+-.+|-.+.+ +|.+ |.|.|. +.|+++-|.. +.+-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 456667777777788999999998866 3444 556665 6899999963 3467888899988886
Q ss_pred hCCCCcCHHHHHHHhhhhHHhhc---CCCCcee--ccCcCCCCCcccccccc--CC-CCC------------CCCHHHHH
Q 018847 116 ACPGVVSCADILTIAAEESVALS---GGPAWTN--LLGRRDSRTANRTLANE--NL-PGP------------NNSLERLK 175 (349)
Q Consensus 116 ~cp~~VScADilalAardAV~~~---GGP~~~v--~~GR~D~~~s~~~~~~~--~l-P~p------------~~~~~~l~ 175 (349)
..||.||+|+|++..+|+.+ +|-.+.| .+||.|++...... +. .| |-. ..+-.-|+
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv-~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDV-ESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcch-hhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 47999999999999999986 7776655 58999997765321 11 11 221 12345567
Q ss_pred HHHHHcCCCccchhhhhcccc-ccccccccccccccccCCCCCCCCCCCcHHHHHHHHhhCCCCCCCCcccccCCCCCcc
Q 018847 176 DRFRNVGLNDNFDLVALSGAH-TFGRAQCRTFSDRLFNFNNTGNPDPTLNTTLLQQLRQLCPQGGNGSVLTNLDVTTPDL 254 (349)
Q Consensus 176 ~~F~~~Glt~~~e~VaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~ 254 (349)
+.-+-.+||.. ||++|+||. -+|..+ .| ....+..| .|..
T Consensus 601 DkAqlL~Ltap-emtVLiGGlRvLg~n~-----------g~-------------------------s~~GVfT~--~pg~ 641 (730)
T COG0376 601 DKAQLLTLTAP-EMTVLIGGLRVLGANY-----------GG-------------------------SKHGVFTD--RPGV 641 (730)
T ss_pred HHHHHhccCCc-cceEEEcceEeeccCC-----------CC-------------------------Cccceecc--Cccc
Confidence 88888999999 999999875 444322 11 12334444 5888
Q ss_pred cChHHHHHhhhcc--------------------c-----ccccccccccCCccchHHHHHHhhhC--HHHHHHHHHHHHH
Q 018847 255 FDNKYFFNLQISK--------------------G-----LLQSDQELFSTPGADTTAIVNVFSSN--QAAFFKSFVISMI 307 (349)
Q Consensus 255 FDN~Yy~~l~~~~--------------------g-----lL~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~Am~ 307 (349)
+.|.||.||++.. | --..|..+-+++ ..|.+.+.||.| ++.|.+||..||.
T Consensus 642 LtndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns--~LRA~aEVYa~dda~ekFv~DFvaaw~ 719 (730)
T COG0376 642 LTNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRALAEVYASDDAKEKFVKDFVAAWT 719 (730)
T ss_pred ccchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcH--HHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 8999999998631 2 134677777888 999999999986 7899999999999
Q ss_pred HhhcCC
Q 018847 308 RMGNLK 313 (349)
Q Consensus 308 Km~~lg 313 (349)
|..++.
T Consensus 720 kVMn~D 725 (730)
T COG0376 720 KVMNLD 725 (730)
T ss_pred HHhccc
Confidence 999875
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=72.59 E-value=40 Score=33.65 Aligned_cols=49 Identities=12% Similarity=0.149 Sum_probs=29.3
Q ss_pred cCCCCceeccCcCCCCCccccccccCCCCC---CCCHHHHHHHHHHcCCCcc
Q 018847 138 SGGPAWTNLLGRRDSRTANRTLANENLPGP---NNSLERLKDRFRNVGLNDN 186 (349)
Q Consensus 138 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Glt~~ 186 (349)
+|-..+..+.||-+-..-.........+.. -..+.++.+.|++.|+..+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~ 231 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTI 231 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeE
Confidence 477888999999865432211111111211 2357788889999988653
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=55.00 E-value=14 Score=29.36 Aligned_cols=32 Identities=16% Similarity=0.134 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCccccccccccCC
Q 018847 297 AFFKSFVISMIRMGNLKPLTGNQGEIRSNCRRVNGN 332 (349)
Q Consensus 297 ~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n~~ 332 (349)
....+|..||.||+.||... .---+||.|-..
T Consensus 2 ~m~~~F~~am~KlavLG~d~----~~LiDCSdVIP~ 33 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGHDR----SDLIDCSDVIPV 33 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-G----GGSEE-GGGS--
T ss_pred hHHHHHHHHHHHHHHhcCCh----hhcccchhhccC
Confidence 35689999999999998653 235689988743
No 21
>PRK05269 transaldolase B; Provisional
Probab=52.23 E-value=1.1e+02 Score=30.38 Aligned_cols=50 Identities=16% Similarity=0.141 Sum_probs=30.8
Q ss_pred hcCCCCceeccCcCCCCCccccccccCCC---CCCCCHHHHHHHHHHcCCCcc
Q 018847 137 LSGGPAWTNLLGRRDSRTANRTLANENLP---GPNNSLERLKDRFRNVGLNDN 186 (349)
Q Consensus 137 ~~GGP~~~v~~GR~D~~~s~~~~~~~~lP---~p~~~~~~l~~~F~~~Glt~~ 186 (349)
.+|-..+..+.||-|-..-...+....-+ ++-..+.++.+.|++.|+..+
T Consensus 169 ~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~t~ 221 (318)
T PRK05269 169 EAGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYYKKHGYKTV 221 (318)
T ss_pred HcCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHHHHcCCCce
Confidence 34778889999999854221100000011 123468888899999999766
No 22
>PRK12346 transaldolase A; Provisional
Probab=43.36 E-value=1.3e+02 Score=29.83 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=37.3
Q ss_pred cCHHHHHHHhhhhHH--hhcCCCCceeccCcCCCCCccccccccCCCC----CCCCHHHHHHHHHHcCCCcc
Q 018847 121 VSCADILTIAAEESV--ALSGGPAWTNLLGRRDSRTANRTLANENLPG----PNNSLERLKDRFRNVGLNDN 186 (349)
Q Consensus 121 VScADilalAardAV--~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Glt~~ 186 (349)
|+|-=.+.+....++ ..+|-..+..+.||-|-..-.... ...++. +-..+.++.+.|++.|+..+
T Consensus 150 I~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~-~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~ 220 (316)
T PRK12346 150 INCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKP-MDPYVVEEDPGVKSVRNIYDYYKQHRYETI 220 (316)
T ss_pred CceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccc-cccccccCCChHHHHHHHHHHHHHcCCCcE
Confidence 444443444444333 335888899999999864322111 111221 12357888889999998654
No 23
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=41.69 E-value=2.6e+02 Score=28.47 Aligned_cols=48 Identities=17% Similarity=0.350 Sum_probs=30.7
Q ss_pred cCCCCceeccCcCCCCCccccccccCCCCCC----CCHHHHHHHHHHcCCCcc
Q 018847 138 SGGPAWTNLLGRRDSRTANRTLANENLPGPN----NSLERLKDRFRNVGLNDN 186 (349)
Q Consensus 138 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~----~~~~~l~~~F~~~Glt~~ 186 (349)
+|-..+..+.||.|-..-.... ...+|... ..+.++.+.|++.|+..+
T Consensus 174 AGa~~ISPfVgRi~dw~~~~~g-~~~~~~~~dpGv~~v~~i~~~~~~~~~~T~ 225 (391)
T PRK12309 174 AGVTLISPFVGRILDWYKKETG-RDSYPGAEDPGVQSVTQIYNYYKKFGYKTE 225 (391)
T ss_pred cCCCEEEeecchhhhhhhhccC-CCccccccchHHHHHHHHHHHHHhcCCCcE
Confidence 5888899999998764322111 01244332 248888889999888655
No 24
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=39.31 E-value=2.5e+02 Score=27.84 Aligned_cols=50 Identities=12% Similarity=0.100 Sum_probs=30.9
Q ss_pred hhcCCCCceeccCcCCCCCccccccccCCC----CCCCCHHHHHHHHHHcCCCcc
Q 018847 136 ALSGGPAWTNLLGRRDSRTANRTLANENLP----GPNNSLERLKDRFRNVGLNDN 186 (349)
Q Consensus 136 ~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP----~p~~~~~~l~~~F~~~Glt~~ 186 (349)
..+|-..+..+.||-|-..-...... ..| ++-..+.++.+.|++.|+..+
T Consensus 166 a~AGa~~ISPFVgRi~dw~~~~~g~~-~~~~~~d~Gv~~v~~i~~~~k~~g~~T~ 219 (317)
T TIGR00874 166 AEAKVTLISPFVGRILDWYKAATGKK-EYSIEEDPGVASVKKIYNYYKKHGYPTE 219 (317)
T ss_pred HHcCCCEEEeecchHhHhhhhccCcc-ccccccCchHHHHHHHHHHHHHcCCCcE
Confidence 34588889999999876322111000 111 123468888889999998765
No 25
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=33.39 E-value=2.2e+02 Score=28.12 Aligned_cols=48 Identities=10% Similarity=0.203 Sum_probs=29.7
Q ss_pred cCCCCceeccCcCCCCCccccccccCCCC----CCCCHHHHHHHHHHcCCCcc
Q 018847 138 SGGPAWTNLLGRRDSRTANRTLANENLPG----PNNSLERLKDRFRNVGLNDN 186 (349)
Q Consensus 138 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Glt~~ 186 (349)
+|-..+..+.||-|-..-..... ...+. +-..+.++.+.|++.|+..+
T Consensus 168 AGa~~ISPfVgRi~d~~~~~~~~-~~~~~~~d~Gv~~v~~i~~~~~~~~~~T~ 219 (313)
T cd00957 168 AGVTLISPFVGRILDWYKKHSGD-KAYTAEEDPGVASVKKIYNYYKKFGYKTK 219 (313)
T ss_pred cCCCEEEeecchHHHhhhhcccc-ccCCccCCcHHHHHHHHHHHHHHcCCCcE
Confidence 47778899999987542211100 01111 22358888889999998765
No 26
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=26.85 E-value=42 Score=27.38 Aligned_cols=15 Identities=27% Similarity=0.350 Sum_probs=7.7
Q ss_pred CcchHHHHHHHHHHHH
Q 018847 1 MASLRYLIAAALVVAF 16 (349)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (349)
|+ |..+++++|+|++
T Consensus 1 Ma-SK~~llL~l~LA~ 15 (95)
T PF07172_consen 1 MA-SKAFLLLGLLLAA 15 (95)
T ss_pred Cc-hhHHHHHHHHHHH
Confidence 77 5555555444433
Done!