BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018851
(349 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T034|SYFA_ARATH Probable phenylalanine--tRNA ligase alpha subunit OS=Arabidopsis
thaliana GN=At4g39280 PE=2 SV=3
Length = 485
Score = 596 bits (1536), Expect = e-169, Method: Compositional matrix adjust.
Identities = 287/341 (84%), Positives = 308/341 (90%), Gaps = 2/341 (0%)
Query: 1 MAEEAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTG 60
MAEEAILG+L+ NEQI+DSG F+AE DHN++VNVIKSLHGFRYID QDIK+ETW+LT
Sbjct: 1 MAEEAILGFLQNNEQITDSGQFSAEFNIDHNELVNVIKSLHGFRYIDVQDIKKETWILTD 60
Query: 61 EGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSR 120
EGKKYAAEGSPEVQLFLAVP EGSISKDELQKKL PAVFKIGCSQAGKNKWVEMGKQVSR
Sbjct: 61 EGKKYAAEGSPEVQLFLAVPEEGSISKDELQKKLAPAVFKIGCSQAGKNKWVEMGKQVSR 120
Query: 121 KVQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAA 180
KV++VEDKVK LLQ+Q G KE I+SLKARKLIVPQ WKGYSV+KGPNYAP+RKK A
Sbjct: 121 KVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKVA 180
Query: 181 TDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTN 240
TDLTRENLQ +WKELEFKEYNF AKG P + GHLH LLKVRKQ KDIF+QMGFEEMPTN
Sbjct: 181 TDLTRENLQ--NWKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGFEEMPTN 238
Query: 241 NFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRG 300
N+VESSFWNFDALFQPQQHPARDSHDTFFL+ PSTTR LPEDYVERVKRVHESGGYGSRG
Sbjct: 239 NYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTRTLPEDYVERVKRVHESGGYGSRG 298
Query: 301 YGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVF 341
Y Y+WKREEANKNLLRTHTTAVSSRML ALA+KPF PKK F
Sbjct: 299 YNYDWKREEANKNLLRTHTTAVSSRMLYALAQKPFVPKKYF 339
>sp|Q5ZJQ2|SYFA_CHICK Phenylalanine--tRNA ligase alpha subunit OS=Gallus gallus GN=FARSA
PE=1 SV=1
Length = 443
Score = 321 bits (823), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 171/329 (51%), Positives = 218/329 (66%), Gaps = 14/329 (4%)
Query: 23 AAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPA 81
AA G DH +V +KSL I+A+ W L+ EG++ +GSPEV+LF +VP+
Sbjct: 30 AAALGLDHQTLVGAVKSLQALGEVIEAETRATTRWELSAEGEEVLRDGSPEVRLFRSVPS 89
Query: 82 EGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQ 135
EG D + KL A ++G S+A NKW+ + G ++ R V V+D V+ L Q
Sbjct: 90 EGLPQSDAM--KLPGA--QVGFSKAMANKWLRLDKGAPGGPRIFRAVDAVQDVVQSSLRQ 145
Query: 136 VQ--NGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDW 193
VQ NG +LS+ E + LK RKL++ T K Y +RKG ++ + TDLT E + G W
Sbjct: 146 VQEGNGGSLSERERTDLKRRKLLLEVTLKSYWIRKGSAFSTAVVRQETDLTPEMIATGSW 205
Query: 194 KELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDAL 253
++L FK YNF+A G P GHLHPLLKVR QL+ IFL+MGF EMPT+NFVESSFWNFDAL
Sbjct: 206 RKLPFKAYNFSALGLPPTCGHLHPLLKVRSQLRQIFLEMGFTEMPTDNFVESSFWNFDAL 265
Query: 254 FQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRGYGYEWKREEANKN 313
FQPQQHPARD HDTFFL++P+ ELP +Y+ RVK+VH GGYGS+GY YEWK EEA KN
Sbjct: 266 FQPQQHPARDQHDTFFLQDPAEAPELPANYMARVKKVHSQGGYGSQGYKYEWKVEEARKN 325
Query: 314 LLRTHTTAVSSRMLKALAEK-PFAPKKVF 341
LLRTHTT+ S+R L LA + F P K F
Sbjct: 326 LLRTHTTSASARALYHLARQGKFTPVKYF 354
>sp|Q1JPX3|SYFA_DANRE Phenylalanine--tRNA ligase alpha subunit OS=Danio rerio GN=farsa
PE=2 SV=2
Length = 497
Score = 319 bits (817), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 176/348 (50%), Positives = 233/348 (66%), Gaps = 14/348 (4%)
Query: 4 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEG 62
EA+L +E+ + DS + +A G DH VV +KSL I A+ + W LTGEG
Sbjct: 8 EALLQRVEQLDGGVDSQDVSAALGVDHQLVVGAVKSLQALGEVISAEQKSSKHWELTGEG 67
Query: 63 KKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GK 116
++ A +GS E ++F A+PAEG + +++L K A K+G S+A NKW+ + G
Sbjct: 68 REIAEQGSHEARVFNAIPAEG-LPQNQLMKM---ASGKVGFSKAMSNKWIRLDKAHEGGP 123
Query: 117 QVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAP 174
+V R V+++ED V+D L VQNG + L ++E + LK RKL+ T K Y + KG +++
Sbjct: 124 RVFRTVESIEDTVRDKLQLVQNGQSAKLEEKEKNELKKRKLLAEVTVKSYWITKGNSFST 183
Query: 175 KRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGF 234
K T+LT E + G+WKE +FK YNF A G + GHLHPL+KVR Q + IFL+MGF
Sbjct: 184 TITKQETELTPEMIASGNWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLEMGF 243
Query: 235 EEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESG 294
EMPTNNF+ESSFWNFD+LFQPQQHPARD HDTFF+ +P+ E P DY+ERVK+VH G
Sbjct: 244 TEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFISDPALAHEFPRDYLERVKKVHSEG 303
Query: 295 GYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEK-PFAPKKVF 341
GYGS+GY Y+WK EEA KNLLRTHTTAVS+RML LA++ F P K F
Sbjct: 304 GYGSQGYKYDWKIEEAQKNLLRTHTTAVSARMLYKLAQQEKFTPVKYF 351
>sp|Q505J8|SYFA_RAT Phenylalanine--tRNA ligase alpha subunit OS=Rattus norvegicus
GN=Farsa PE=1 SV=1
Length = 508
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/355 (47%), Positives = 225/355 (63%), Gaps = 18/355 (5%)
Query: 1 MAEEAILGYLEKNEQISDSG----NFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRET 55
MA+ +L L + +++D G A + G +H VV +KSL I+A+ +
Sbjct: 1 MADNPVLEQLLRRLEVADGGLDSAELATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKC 60
Query: 56 WVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM- 114
W LT EG++ A EGS E ++F ++P EG + + +Q K+G S+A NKW+ +
Sbjct: 61 WELTTEGEEIAREGSHEARVFRSIPLEGLVQSELMQLPSG----KVGFSKAMSNKWIRVD 116
Query: 115 -----GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVR 167
G +V R V ++ED+V+ L QVQ G A L+++E + L+ RKL+ K Y V
Sbjct: 117 KSAADGPRVFRVVDSIEDEVQRRLQQVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVS 176
Query: 168 KGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKD 227
KG ++ K +L+ E + G W++ FK YNF+A+G + GHLHPLLKVR Q +
Sbjct: 177 KGKGFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQ 236
Query: 228 IFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERV 287
IFL+MGF EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP DYV+RV
Sbjct: 237 IFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRV 296
Query: 288 KRVHESGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAE-KPFAPKKVF 341
KR H GGYGS+GY Y WK EEA KNLLRTHTTA S+R L LA+ KPF P K F
Sbjct: 297 KRTHSQGGYGSQGYKYTWKLEEARKNLLRTHTTAASARALYRLAQKKPFTPAKYF 351
>sp|Q9Y285|SYFA_HUMAN Phenylalanine--tRNA ligase alpha subunit OS=Homo sapiens GN=FARSA
PE=1 SV=3
Length = 508
Score = 312 bits (800), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 171/348 (49%), Positives = 225/348 (64%), Gaps = 14/348 (4%)
Query: 4 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEG 62
E +L LE ++ DS AAE G +H VV +KSL I+A+ + W LT EG
Sbjct: 8 ELLLRRLEASDGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKHWELTAEG 67
Query: 63 KKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GK 116
++ A EGS E ++F ++P EG +++ EL + P+ K+G S+A NKW+ + G
Sbjct: 68 EEIAREGSHEARVFRSIPPEG-LAQSELMRL--PSG-KVGFSKAMSNKWIRVDKSAADGP 123
Query: 117 QVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAP 174
+V R V ++ED+V+ L V+ G A L ++E S L+ RKL+ T K Y V KG ++
Sbjct: 124 RVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVTLKTYWVSKGSAFST 183
Query: 175 KRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGF 234
K T+L+ E + G W++ FK YNF A G + GHLHPLLKVR Q + IFL+MGF
Sbjct: 184 SISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGF 243
Query: 235 EEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESG 294
EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP DYV+RVKR H G
Sbjct: 244 TEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQG 303
Query: 295 GYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAE-KPFAPKKVF 341
GYGS+GY Y WK +EA KNLLRTHTT+ S+R L LA+ KPF P K F
Sbjct: 304 GYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYF 351
>sp|Q5RFA2|SYFA_PONAB Phenylalanine--tRNA ligase alpha subunit OS=Pongo abelii GN=FARSA
PE=2 SV=1
Length = 508
Score = 311 bits (796), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 170/348 (48%), Positives = 224/348 (64%), Gaps = 14/348 (4%)
Query: 4 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEG 62
E +L LE ++ DS AAE G +H VV +KSL I+A+ + W LT EG
Sbjct: 8 ELLLRRLEASDGGLDSAELAAELGMEHQAVVGAVKSLQALGEVIEAELRSTKRWELTAEG 67
Query: 63 KKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GK 116
++ A EGS E ++F ++P EG +++ EL + P+ K+G S+A NKW+ + G
Sbjct: 68 EEIAREGSHEARVFRSIPPEG-LAQSELMRL--PSG-KVGFSKAMSNKWIRVDKSAADGP 123
Query: 117 QVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAP 174
+V R V ++ED+V+ L V+ G A L ++E S L+ RKL+ K Y V KG ++
Sbjct: 124 RVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVILKTYWVSKGSAFST 183
Query: 175 KRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGF 234
K T+L+ E + G W++ FK YNF A G + GHLHPLLKVR Q + IFL+MGF
Sbjct: 184 SISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGF 243
Query: 235 EEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESG 294
EMPT+NF+ESSFWNFDALFQPQQHPARD HDTFFL +P+ +LP DYV+RVKR H G
Sbjct: 244 TEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQG 303
Query: 295 GYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAE-KPFAPKKVF 341
GYGS+GY Y WK +EA KNLLRTHTT+ S+R L LA+ KPF P K F
Sbjct: 304 GYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYF 351
>sp|Q7SYV0|SYFAB_XENLA Phenylalanine--tRNA ligase alpha subunit B OS=Xenopus laevis
GN=farsa-b PE=2 SV=1
Length = 499
Score = 307 bits (786), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/335 (49%), Positives = 214/335 (63%), Gaps = 16/335 (4%)
Query: 18 DSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLF 76
D+ AA DH VV +KSL I+A+ + W L+ EG++ A GS E ++F
Sbjct: 23 DTLELAAVLSVDHQQVVGAVKSLQCLGEIIEAEQRSSKKWELSSEGEEIAQVGSHEARVF 82
Query: 77 LAVPAEGSISKDELQKKLDPAVF-KIGCSQAGKNKWVEM------GKQVSRKVQNVEDKV 129
++P EG LQ +L F K+G S+A NKW+ + G V R V+ +ED V
Sbjct: 83 QSLPKEGL-----LQAELMKLPFAKVGFSKAMSNKWIRLDKAAAGGPCVYRVVETIEDTV 137
Query: 130 KDLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTREN 187
K+ L + G A +++++ + LK RKL+ T K Y V KG ++ K TDLT E
Sbjct: 138 KEKLQLILKGRADDVNEKDKNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEM 197
Query: 188 LQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSF 247
+ G W+E +FK YNFNA G E GHLHPLLKVR Q + IFL+MGF EMPTNNF+ESSF
Sbjct: 198 IASGSWREKQFKGYNFNALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSF 257
Query: 248 WNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRGYGYEWKR 307
WNFDALFQPQQHPARD HDTFFL++P+ E P +Y+ERVK+VH GGYGS+GY Y+W
Sbjct: 258 WNFDALFQPQQHPARDQHDTFFLQDPALATEFPMEYLERVKKVHSEGGYGSQGYKYDWSI 317
Query: 308 EEANKNLLRTHTTAVSSRMLKALA-EKPFAPKKVF 341
EA KN+LRTHTTAVS+RML LA +K F P K F
Sbjct: 318 HEAQKNILRTHTTAVSARMLYKLAHQKEFTPVKYF 352
>sp|Q6AZG6|SYFAA_XENLA Phenylalanine--tRNA ligase alpha subunit A OS=Xenopus laevis
GN=farsa-a PE=2 SV=1
Length = 498
Score = 306 bits (785), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/334 (48%), Positives = 213/334 (63%), Gaps = 14/334 (4%)
Query: 18 DSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLF 76
DS AA G +H VV +KSL I A+ + W L+ EG++ EGS E ++F
Sbjct: 23 DSLELAALLGVEHQQVVGAVKSLQCLGEIIQAEQRSSKKWELSSEGEEIGREGSHEARVF 82
Query: 77 LAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVK 130
+P EG + +++ K+G S+A NKW+ + G ++ R V ++ED VK
Sbjct: 83 QTLPKEGLLQAQLMKQPFS----KVGFSKAMSNKWIRLDKAAEGGPRIYRVVDSIEDTVK 138
Query: 131 DLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENL 188
+ L + G A +++++ + LK RKL+ T K Y V KG ++ K TDLT E +
Sbjct: 139 EKLQLILKGRADDVNEKDRNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMI 198
Query: 189 QKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFW 248
G W+E +FK YNF+A G E GHLHPLLKVR Q + IFL+MGF EMPTNNF+ESSFW
Sbjct: 199 ASGSWREKQFKGYNFDALGVMPECGHLHPLLKVRTQFRQIFLEMGFTEMPTNNFIESSFW 258
Query: 249 NFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRGYGYEWKRE 308
NFDALFQPQQHPARD HDTFFL++P+ E P +Y+ERVK+VH GGYGS+GY Y+W
Sbjct: 259 NFDALFQPQQHPARDQHDTFFLQDPALATEFPMEYLERVKKVHSEGGYGSQGYKYDWSIH 318
Query: 309 EANKNLLRTHTTAVSSRMLKALA-EKPFAPKKVF 341
EA KN+LRTHTTAVS+RML LA +K F P K F
Sbjct: 319 EAQKNILRTHTTAVSARMLYKLALQKDFTPVKYF 352
>sp|Q8C0C7|SYFA_MOUSE Phenylalanine--tRNA ligase alpha subunit OS=Mus musculus GN=Farsa
PE=2 SV=1
Length = 508
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/334 (48%), Positives = 212/334 (63%), Gaps = 14/334 (4%)
Query: 18 DSGNFAAERGFDHNDVVNVIKSLHGF-RYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLF 76
DS A + G +H VV +KSL I+A+ + W LT EG++ A EGS E ++F
Sbjct: 22 DSAELATQLGVEHQAVVGAVKSLQALGEVIEAELRSTKCWELTTEGEEIAREGSHEARVF 81
Query: 77 LAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVK 130
++P EG + + + K+G S+A NKW+ + G +V R V ++ED+V+
Sbjct: 82 RSIPLEGLVQSELMHLPSG----KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSIEDEVQ 137
Query: 131 DLLLQVQNGHA--LSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENL 188
L VQ G A L+++E + L+ RKL+ K Y V KG ++ K +L+ E +
Sbjct: 138 KRLQLVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKAFSTSVSKQEAELSPEMI 197
Query: 189 QKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFW 248
G W++ FK YNF+A+G + GHLHPLLKVR Q + IFL+MGF EMPT+NF+ESSFW
Sbjct: 198 SSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFW 257
Query: 249 NFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRGYGYEWKRE 308
NFDALFQPQQHPARD HDTFFL +P+ +LP YV+RVKR H GGYGS+GY Y WK E
Sbjct: 258 NFDALFQPQQHPARDQHDTFFLRDPAEALQLPMGYVQRVKRTHSQGGYGSQGYKYTWKLE 317
Query: 309 EANKNLLRTHTTAVSSRMLKALAE-KPFAPKKVF 341
EA KNLLRTHTTA S+R L LA+ KPF P K F
Sbjct: 318 EARKNLLRTHTTAASARALYQLAQKKPFTPAKYF 351
>sp|Q9W3J5|SYFA_DROME Probable phenylalanine--tRNA ligase alpha subunit OS=Drosophila
melanogaster GN=CG2263 PE=2 SV=1
Length = 498
Score = 277 bits (708), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 168/355 (47%), Positives = 224/355 (63%), Gaps = 21/355 (5%)
Query: 4 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSL--HGFRYIDAQDIKRETWVLTGE 61
E IL +LE ++ +D+ + AA DH +V +KS+ HG + A+ + ++ LT E
Sbjct: 7 ERILQHLETTDK-ADTLDLAALFAEDHQKIVGSLKSIQAHG-ELVTAETVTHKSLGLTDE 64
Query: 62 GKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVS-- 119
G+ GS E ++ VP EG I++ L A K+G S+A + W+ + K V+
Sbjct: 65 GRAVVENGSHEALVYDLVPPEG-IAQAALMAA-GGANAKVGFSKAMSHGWILVDKSVTPP 122
Query: 120 ---RKVQNVEDKVKDLLLQVQ--NGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAP 174
RKV + D V++ L QV G L +E++ K RKL+ T K + + +GP +A
Sbjct: 123 LVRRKVDTITDVVRNQLQQVALGKGDQLPAKEVADFKKRKLLQETTTKSFVLARGPEFAT 182
Query: 175 KRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGF 234
K TDLT E L G W +L+FK YNF+A G P GHLHPLLKVR + + IFL+MGF
Sbjct: 183 TLTKLETDLTVEMLANGLWDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGF 242
Query: 235 EEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESG 294
EMPTNN+VESSFWNFDAL+QPQQHPARD+HDTFF+ P+ + + P+DY+ERVK+VH G
Sbjct: 243 SEMPTNNYVESSFWNFDALYQPQQHPARDAHDTFFVNHPAKSHKFPQDYLERVKKVHSVG 302
Query: 295 GYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAE--------KPFAPKKVF 341
GYGS+GYGY+WK EEA KNLLRTHTTAVS+RML LA K F+ KVF
Sbjct: 303 GYGSKGYGYDWKLEEAQKNLLRTHTTAVSARMLYKLANQEGGFKAAKYFSIDKVF 357
>sp|Q54KS8|SYFA_DICDI Phenylalanine--tRNA ligase alpha subunit OS=Dictyostelium
discoideum GN=phesA PE=3 SV=1
Length = 487
Score = 247 bits (630), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 200/336 (59%), Gaps = 13/336 (3%)
Query: 10 LEKNEQISDSGNFAAE--RGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAA 67
L+K+ I +S ++ E +++NDVV ++KS I + I LT GK
Sbjct: 14 LDKDNLIENSREWSNEIDSTWNYNDVVGILKSWESLNTISLEYIDSIVNCLTETGKDILI 73
Query: 68 EGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNK-WVEM-GKQVSRKVQNV 125
GSPE +L+ + +G +S + K+ F + KNK W+E+ ++ +KV+++
Sbjct: 74 NGSPEAKLYNILTEQG-MSPADANKQFGATAFG-----SAKNKGWIEVKAGKIFKKVESI 127
Query: 126 EDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTR 185
D VK L + + L + + K + I + Y V KG Y KR K +DLT
Sbjct: 128 NDIVKSDL-SIPDLSKLDSKTLEQYKKSRFIEEKKLSYYRVTKGEQYN-KRSKELSDLTI 185
Query: 186 ENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVES 245
E L+ W++ FK N NA G E G+ HPL KV+ + K IFL MGFEEMPT NFVE+
Sbjct: 186 EMLKDDSWEKESFK-VNINAMGVVPEQGYRHPLNKVKNEFKQIFLDMGFEEMPTFNFVEN 244
Query: 246 SFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRGYGYEW 305
FWNFDALFQPQQHPAR+ DTFF+++P T+ + ++Y ERVK+VH GGYGS G+ Y+W
Sbjct: 245 GFWNFDALFQPQQHPARELQDTFFIKDPKTSHDFSDEYCERVKQVHSVGGYGSLGWIYDW 304
Query: 306 KREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVF 341
K EEA KN+LRTHTTAVS+RML LA+ F PKK F
Sbjct: 305 KLEEAEKNILRTHTTAVSARMLYKLAQNGFKPKKYF 340
>sp|P15625|SYFA_YEAST Phenylalanine--tRNA ligase alpha subunit OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=FRS2 PE=1
SV=3
Length = 503
Score = 245 bits (625), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 196/324 (60%), Gaps = 16/324 (4%)
Query: 32 DVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQ 91
DV++ + SL ++ + T+ LT EG + EGS E++L + G + ++
Sbjct: 32 DVLSALNSLKAHNKLEFSKVDTVTYDLTKEGAQILNEGSYEIKLVKLIQELGQLQIKDVM 91
Query: 92 KKLDPAVFKIGCSQAGKNKWVEMGK----QVSRKVQNVE-----DKVKDLLLQVQNGHAL 142
KL P V K+G ++A KN W+ ++S K+QN + D+ + +L Q++N L
Sbjct: 92 SKLGPQVGKVGQARAFKNGWIAKNASNELELSAKLQNTDLNELTDETQSILAQIKNNSHL 151
Query: 143 SKEE---ISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFK 199
+ ++ LK RKLI ++V KGP ++ K TDLT + + +K+L+FK
Sbjct: 152 DSIDAKILNDLKKRKLIAQGKITDFNVTKGPEFSTDLTKLETDLTSDMVSTNAYKDLKFK 211
Query: 200 EYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQH 259
YNFN++G G LHPL KVR++ + IF MGF EMP+N +VE+ FWNFDAL+ PQQH
Sbjct: 212 PYNFNSQGVQISSGALHPLNKVREEFRQIFFSMGFTEMPSNQYVETGFWNFDALYVPQQH 271
Query: 260 PARDSHDTFFLEEPSTTRELPED--YVERVKRVHESGGYGSRGYGYEWKREEANKNLLRT 317
PARD DTF++++P T +LP+D Y++ +K VHE G +GS GY Y WK EE K +LRT
Sbjct: 272 PARDLQDTFYIKDP-LTADLPDDKTYMDNIKAVHEQGRFGSIGYRYNWKPEECQKLVLRT 330
Query: 318 HTTAVSSRMLKALAEKPFAPKKVF 341
H+TA+S+RML LA+ P P ++F
Sbjct: 331 HSTAISARMLHDLAKDP-KPTRLF 353
>sp|C4V6K5|SYFA_NOSCE Probable phenylalanine--tRNA ligase alpha subunit OS=Nosema ceranae
(strain BRL01) GN=NCER_100038 PE=3 SV=1
Length = 474
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 188/312 (60%), Gaps = 10/312 (3%)
Query: 31 NDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDEL 90
N++ V+ SL I ++ + LT EG+ GS E L+ ++ G
Sbjct: 27 NELYPVLLSLASKEIISFTFKEQIIYKLTEEGESILKNGSYEFNLYNSIGDNG------- 79
Query: 91 QKKLDPAVFKIGCSQAGKNKWVE-MGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEISS 149
+ L+ + +G A KNKW++ +G +V + NVED VK++L V N KEEIS
Sbjct: 80 MELLEVDKYNLGKVNAFKNKWIKKVGDKVYKSADNVEDNVKNMLNNVTN-KIYQKEEISL 138
Query: 150 LKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQP 209
LK RKLI Y ++KGP Y K T+L + + G++K L FK YNFN KG
Sbjct: 139 LKKRKLIYQAKEVVYFIKKGPLYG-KDSDNITELISKMVISGEYKHLNFKPYNFNTKGNI 197
Query: 210 AEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFF 269
G LHPL+KVR++++ IFL+MGF EM TN FVESSFWNFD LFQPQ HP+RD+HDTFF
Sbjct: 198 QSQGALHPLMKVREEIRKIFLEMGFNEMTTNKFVESSFWNFDTLFQPQNHPSRDAHDTFF 257
Query: 270 LEEPSTTRELPEDYVERVKRVHESGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKA 329
++ PSTT +P DY++ +K++H G + S G+ +W +EA KN+LR+HTTA S+R +
Sbjct: 258 MKTPSTTSYIPIDYMKMIKKIHSVGDFDSDGHFSDWDIKEAEKNILRSHTTACSTRTMLE 317
Query: 330 LAEKPFAPKKVF 341
+A+ F K+F
Sbjct: 318 IAKGEFISAKLF 329
>sp|Q8SRG9|SYFA_ENCCU Probable phenylalanine--tRNA ligase alpha subunit
OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU07_1660
PE=3 SV=1
Length = 475
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 181/286 (63%), Gaps = 10/286 (3%)
Query: 57 VLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM-G 115
VLT EG++ GS E L ++ +G +S +EL++ +G A +NKW+ G
Sbjct: 54 VLTPEGEEVERSGSQEYLLLESIGEDG-MSIEELERH------SLGKMNAFRNKWIRREG 106
Query: 116 KQVSRKVQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPK 175
+V R V+++ED V+++++ ++ G A S EE+ +L+ RKL+ + + KGP +
Sbjct: 107 NRVFRNVESIEDTVRNMVISMKRGTA-SAEEVEALRKRKLVSRRKKIVFIATKGPMFFDN 165
Query: 176 RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFE 235
T+LT E + G +++L FK YNFNA+G + G +HPL+K+R+ + IF+++GF
Sbjct: 166 -TSYVTELTSEMVLDGSYRDLSFKHYNFNAEGNAPQCGSIHPLMKIREDFRRIFIELGFS 224
Query: 236 EMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGG 295
EM TN +VESSFWNFDALFQPQ HP+RD+HDTFFL P + + P DY++ V H G
Sbjct: 225 EMATNQYVESSFWNFDALFQPQNHPSRDAHDTFFLLNPELSTDFPSDYLKEVGETHRGGK 284
Query: 296 YGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVF 341
Y S GY W +EA KN+LRTHTT+VS+R L LA+K F P K+F
Sbjct: 285 YNSLGYMSNWDIKEAQKNILRTHTTSVSARNLYRLAKKEFKPAKLF 330
>sp|O42870|SYFA_SCHPO Phenylalanine--tRNA ligase alpha subunit OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=frs2 PE=3 SV=3
Length = 499
Score = 234 bits (597), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 134/313 (42%), Positives = 195/313 (62%), Gaps = 8/313 (2%)
Query: 35 NVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGS-ISKDELQKK 93
+ I SL I+ + E + LT EG+ A GS E +++ + A S ++ EL+KK
Sbjct: 41 SAILSLAAKNMIEFSRHEIEIYNLTAEGENICANGSHEAKVYNEICASMSGLNIGELKKK 100
Query: 94 LDPAVFKIGCSQAGKNKWVEM-GKQVSRKVQNVEDKVKDLLLQV-QNGHALSKEEISSLK 151
L + IG +A K W++ G ++ + ++ D+ +L ++ ++G + ++ LK
Sbjct: 101 LGNSA-GIGQGRAFKLGWIKKDGDKLVKNTDSITDETPKVLSEIKEHGTISDSKTLTDLK 159
Query: 152 ARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAE 211
RKL+ +S+RKGPN++ + +K TDLT E + W+ +FK YNF A+G P
Sbjct: 160 KRKLVERNKIMYFSLRKGPNFSLQIEKLNTDLTAEMITSRSWESAKFKSYNFAAEGIPPA 219
Query: 212 GGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLE 271
GG LHPL+KVR++ + F ++GFEEMPTNNFVES FWNFDALF PQQH ARD+ DTFFL+
Sbjct: 220 GGCLHPLMKVREEFRKFFFELGFEEMPTNNFVESGFWNFDALFVPQQHSARDAQDTFFLK 279
Query: 272 EPSTTRELPE-DYVERVKRVHESGGYGSRGYGYE--WKREEANKNLLRTHTTAVSSRMLK 328
P++T +LP+ +YV RVK HE+GG ++G GY + EE K +LRTHTTAVS+ ML
Sbjct: 280 VPASTDKLPDPEYVARVKATHENGGE-TKGIGYRAPFSLEETRKLVLRTHTTAVSANMLY 338
Query: 329 ALAEKPFAPKKVF 341
LA+ F P K F
Sbjct: 339 KLAQNGFHPAKYF 351
>sp|B7XI98|SYFA_ENTBH Probable phenylalanine--tRNA ligase alpha subunit OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_22775 PE=3 SV=1
Length = 488
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 179/342 (52%), Gaps = 30/342 (8%)
Query: 3 EEAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEG 62
E+ IL L IS + E D+ V+ SL + +D I VLT +G
Sbjct: 4 EQDILNLLAVKNIIS-----SDELNCKSTDIHGVLLSLSSKKVVDYTIIPIVERVLTPQG 58
Query: 63 KKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM-GKQVSRK 121
++ EGS E L + + + ++S D + K A KNKW++M Q+
Sbjct: 59 RQVEKEGSQEYNL-ITMLMKSNLSIDNIDKT--------TLKYAFKNKWIKMENNQIVLS 109
Query: 122 VQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAAT 181
++D + LL +N ++SK+E LK RKL+ Y + +G N+ ++K
Sbjct: 110 GTTIQDITQKLL---RNLDSISKDEFEELKKRKLVDINKKNIYKITRGENFNIEQKDIIN 166
Query: 182 DLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNN 241
+LT +NL L K+YNFN G LHPL K++ + K IFL+MGF EM T
Sbjct: 167 ELTTQNLFNISDTSL-LKKYNFNLSKVSRFFGSLHPLTKIKSEFKRIFLEMGFSEMNTGK 225
Query: 242 FVESSFWNFDALFQPQQHPARDSHDTFFLEEP--STTRELPEDYVERVKRVHESG----- 294
+VESSFWNFD+LFQPQ HP+R+ DTFFL+ P + ++ Y+ RV+ +H S
Sbjct: 226 YVESSFWNFDSLFQPQNHPSREIQDTFFLKVPRLNDLNDVDSQYINRVESIHSSTSIPVD 285
Query: 295 -GYG---SRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAE 332
GY S+G+ W EA KN+LRTHTTA+SS+ML LA+
Sbjct: 286 EGYDKCYSKGHNNVWSVAEAKKNILRTHTTAISSQMLYKLAQ 327
>sp|O28324|SYFA_ARCFU Phenylalanine--tRNA ligase alpha subunit OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pheS PE=3 SV=1
Length = 474
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 174/325 (53%), Gaps = 12/325 (3%)
Query: 27 GFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSIS 86
G + V+ L Y+ + R + LT EG++Y EG PE +L+ V + G S
Sbjct: 29 GLSKDAVLKAAYMLQERGYVRVIENVRTHYSLTEEGERYLKEGLPEEKLYSLVKS-GVNS 87
Query: 87 KDELQKKLDPAVFKIGCSQAGKNKWVEM-GKQVSRKVQNVEDKVKDLLLQVQNGHALSKE 145
DEL+K++ F+I + VE+ G +V K + D+ + L ++ G + +
Sbjct: 88 MDELRKRMGRE-FQIALGWLRRKGAVEVEGDKVVPKREPSFDE-RAALQAIKEGRGVDEG 145
Query: 146 EISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNA 205
+ +L RKL+ K + + + TDLT E L +G W+ +F +Y+
Sbjct: 146 TLKTLMKRKLVTKSETKQVYIEVMKKPEIELEDIITDLTPEMLLEGTWRGKQFLKYDITI 205
Query: 206 KGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSH 265
+ GG +HP ++ ++ + +FL+MGF E+ ++V+ +FWNFDALFQPQ HPARD
Sbjct: 206 PAKEIYGGKIHPYERIIEECRKVFLEMGFTEI-KGHYVQPAFWNFDALFQPQDHPARDMQ 264
Query: 266 DTFFLEEPSTTRELPEDYVERVKRVHESGGY-GSRGYGYEWKREEANKNLLRTHTTAVSS 324
DTF+L+ +L + VERVK HE+G GS G+G EW E+A + +LRTHTTA++
Sbjct: 265 DTFYLDR---YIDLEGEIVERVKATHENGWITGSTGWGGEWSLEKARQLVLRTHTTAIT- 320
Query: 325 RMLKALAEKPFAPKKVFLHRSCFQK 349
+ LAE P P+K F +++
Sbjct: 321 --IHYLAENPEPPQKAFCIDRVYRR 343
>sp|Q8TYM5|SYFA_METKA Phenylalanine--tRNA ligase alpha subunit OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=pheS PE=3 SV=1
Length = 524
Score = 161 bits (407), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 184/354 (51%), Gaps = 65/354 (18%)
Query: 32 DVVNVIKSLHGFR---YIDAQDIKRETWVLTGEGKKYAAEGSPEVQLF------------ 76
D+ V++SL+ I++++ E + L EGK+YA EG PE+++
Sbjct: 39 DLGPVMRSLYWLEERGLIESEEETHEVYELGDEGKEYAEEGLPELRIVEVLRKIGGEGRL 98
Query: 77 ------------LAVPAEGSISK------------------DELQKKLDPAVFKIGCSQA 106
LA P G + + +E + +D +V + ++
Sbjct: 99 EEVLDRAGVPRKLAGPVLGWLRRKGLAEIKREDGETSLVLLEEEPEDVDQSVLEALAAEG 158
Query: 107 GKNKWVEMGKQVSRKVQNVEDKVKDLLLQV-QNGHALSKEEISSLKARKLIVPQTWKGYS 165
+ ++++RK++ E++V+ L ++ + G L E + K R T +G
Sbjct: 159 SASV-----EELARKLEMDEEEVEKALKRLSERGDVLRAREETVKKVR-----LTERGEE 208
Query: 166 VRKGPNYAPK--RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRK 223
V +AP+ + T+L E+L++G WKE EFK Y+ A P G HPL +V
Sbjct: 209 V---AEHAPEVLERDWITELKPEHLREGTWKEKEFKPYDVKAPTSPTFPGKRHPLKEVIN 265
Query: 224 QLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELP-ED 282
+++ IFL+MGF E+ + VESSFWNFDALFQPQ H AR+ DTF+L+EP+ ELP E+
Sbjct: 266 EIRRIFLEMGFVEV-SGPLVESSFWNFDALFQPQDHAAREMQDTFYLKEPAEA-ELPDEE 323
Query: 283 YVERVKRVHESGG-YGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPF 335
VE+V+ VHE GG GSRG+GYEW A K +LRTHTTAVS R L + P
Sbjct: 324 VVEKVRAVHEDGGDTGSRGWGYEWDEGVARKTVLRTHTTAVSVRKLYEVEGPPL 377
>sp|Q8TUA2|SYFA_METAC Phenylalanine--tRNA ligase alpha subunit OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pheS PE=3 SV=1
Length = 492
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 160/310 (51%), Gaps = 23/310 (7%)
Query: 54 ETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVE 113
E + LT EG++Y G PE Q+ A+ A + +EL+ + P I K W +
Sbjct: 61 ERYSLTKEGEEYTKTGLPERQIIDALKAPAPL--EELRSRFSPKTVGIATGWLIKKGWAK 118
Query: 114 MGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEISS-------LKARKLIVPQTWKGYSV 166
+ V N + +L G A + EE+++ L RKL++ K +V
Sbjct: 119 VENGVMVPSGNAPAGRDEEVLAAFAGKAKTLEELAADEGTVKELLKRKLVIKHEEKSRTV 178
Query: 167 R---KGPNYAPK---RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLK 220
G A + ++ LT E L+ G WK +F+ Y + P G +HP +
Sbjct: 179 SVTGAGSALAAEGIVLEEEIAQLTPELLKSGAWKGKKFRPYRLDIAPNPLYGVKIHPYRR 238
Query: 221 VRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELP 280
+ +Q++ IFL+MGF E+ ++SSFWNFDALFQPQ HPARD DTF L + +LP
Sbjct: 239 LIEQMRQIFLEMGFTEI-KGGIIQSSFWNFDALFQPQDHPARDMQDTFHL---GSICQLP 294
Query: 281 EDYVERVKRVHESGG-YGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKK 339
+Y ++V +HESGG S G+G W RE A +N+LRTHTT+V+ +K LA+ P P K
Sbjct: 295 AEYSDKVAAMHESGGDIDSCGWGGIWDRELARRNVLRTHTTSVT---IKYLADNPEPPVK 351
Query: 340 VFLHRSCFQK 349
F +++
Sbjct: 352 AFCIDRAYRR 361
>sp|Q46CQ6|SYFA_METBF Phenylalanine--tRNA ligase alpha subunit OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=pheS PE=3 SV=1
Length = 492
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 161/312 (51%), Gaps = 27/312 (8%)
Query: 54 ETWVLTGEGKKYAAEGSPEVQL--FLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKW 111
E + LT EG +Y G PE Q+ FL P S +EL+ P + I K W
Sbjct: 61 ERYSLTKEGTEYTKTGLPERQIIDFLKKPT----SLEELRGHFSPKMVGIATGWLVKKGW 116
Query: 112 VEMGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEISS-------LKARKLIVP--QTWK 162
++ V V + L G A + EEI S L RKL++ + ++
Sbjct: 117 AKIENGVMVPSGKVNAGKDEETLAAFTGKAKTLEEIGSDQGTIKDLLKRKLVIKHEEKFR 176
Query: 163 GYSVRKGPNYAPKR----KKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPL 218
S+ N + ++ LT E L+ G WK+ +F+ Y + + G +HP
Sbjct: 177 TVSITDAGNALATQGLVLEEEIAQLTPELLKSGAWKDKKFRPYRLDITPKSLYGAKIHPY 236
Query: 219 LKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRE 278
++ +Q++ IFL+MGF E+ ++SSFWNFDALFQPQ HPARD DTF L ++T E
Sbjct: 237 RRLIEQMRQIFLEMGFAEI-KGGIIQSSFWNFDALFQPQDHPARDMQDTFHL---NSTCE 292
Query: 279 LPEDYVERVKRVHESGG-YGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAP 337
LP +Y E+V +HE GG S G+G W +E + +N+LRTHTT+V+ +K LA+ P +P
Sbjct: 293 LPTEYFEKVAAMHEHGGDIDSCGWGGAWDKELSRRNVLRTHTTSVT---VKYLADHPKSP 349
Query: 338 KKVFLHRSCFQK 349
K F +++
Sbjct: 350 VKAFCIDRAYRR 361
>sp|Q8PWV6|SYFA_METMA Phenylalanine--tRNA ligase alpha subunit OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pheS PE=3 SV=1
Length = 495
Score = 157 bits (398), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 160/310 (51%), Gaps = 23/310 (7%)
Query: 54 ETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVE 113
E + LT EG++Y G PE Q+ A+ + +S +EL+ P I K W +
Sbjct: 64 ERYSLTKEGEEYKKTGLPERQIIDAL--KNPVSLEELRSCFSPQTVGIATGWLVKKGWAK 121
Query: 114 MGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEISS-------LKARKLIVPQTWKGYSV 166
+ + + + L G A + EE+ + L RKL+V K +V
Sbjct: 122 VENGIMVPSGEASEGKDEKALSAFAGKAKTLEELGADEGTVKDLLKRKLVVKHEEKFRTV 181
Query: 167 R---KGPNYAPK---RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLK 220
G A + ++ LT E L+ G WKE +F+ Y + +P G +HP +
Sbjct: 182 SITDAGSELASQGLVLEEEIAQLTPELLKSGAWKEKKFRPYRLDITPKPLYGTKIHPYRR 241
Query: 221 VRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELP 280
+ +Q++ IFL+MGF E+ ++SSFWNFDALFQPQ HPARD DTF L +T ++P
Sbjct: 242 LIEQMRQIFLEMGFTEI-KGGIIQSSFWNFDALFQPQDHPARDMQDTFHL---GSTCQIP 297
Query: 281 EDYVERVKRVHESGG-YGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKK 339
+Y +V +HE+GG S G+G W RE A +N+LRTHTT+V+ +K LA+ P P K
Sbjct: 298 AEYSGKVAAMHENGGDIDSCGWGGIWDRELAGRNVLRTHTTSVT---IKYLADNPEPPVK 354
Query: 340 VFLHRSCFQK 349
F +++
Sbjct: 355 AFCIDRAYRR 364
>sp|Q979U4|SYFA_THEVO Phenylalanine--tRNA ligase alpha subunit OS=Thermoplasma volcanium
(strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 /
GSS1) GN=pheS PE=3 SV=1
Length = 482
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 181/356 (50%), Gaps = 19/356 (5%)
Query: 3 EEAILGYL-EKNEQISDSGNFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGE 61
E IL YL KN++I +S +G D+ + L ID + + +VLT E
Sbjct: 8 EALILKYLASKNQEIEESN--IEIKGLSRQDIASATSWLQVKGLIDVKTREEVAYVLTDE 65
Query: 62 GKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRK 121
GK+YA G PE++ + + +G +S +LQ+ + P +KI +Q K +
Sbjct: 66 GKRYAENGLPELRAYSILKRKGKLSLRDLQEAM-PDEYKIVLAQLAKFGITPKNGVLEYS 124
Query: 122 VQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVR------KGPNYAPK 175
++E ++ + + + +E I K RK ++ + K SVR KG
Sbjct: 125 DGHIEAEISRRQRFLSDLNTDDQEMIEHFKRRKNVIEE--KKRSVRIVSINSKGLEQLNN 182
Query: 176 --RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMG 233
+ +A ++ + WK F++Y+ +A P + HPL+ +++ IFL MG
Sbjct: 183 FDQFEAIGEIDSGIITSQAWKTAPFRKYDLDAPVSPTKSYAKHPLVYFINEIRRIFLDMG 242
Query: 234 FEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHES 293
F EM + +++ES+ W+ DALF PQ HPARD DTF++++ + T E PE +R+KR+HE
Sbjct: 243 FTEM-SGHYIESALWDMDALFIPQDHPARDMQDTFYVKDSNFTIEHPE-IEKRIKRIHER 300
Query: 294 GGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKP---FAPKKVFLHRSC 346
G G G+GY W ++ K +LRTHTT ++R L P F+ +KVF H S
Sbjct: 301 GFDGYSGWGYRWSSDDGKKLILRTHTTVTTARYLYEHNTYPQAIFSVEKVFRHESV 356
>sp|A3CT76|SYFA_METMJ Phenylalanine--tRNA ligase alpha subunit OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pheS
PE=3 SV=1
Length = 481
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 162/347 (46%), Gaps = 39/347 (11%)
Query: 12 KNEQISDSGNFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSP 71
+ E + N A +RG +D + +V T EG+ Y +G P
Sbjct: 32 RREAVVQYANLAGDRGL-----------------VDVEKHVARRYVPTEEGRAYMGKGLP 74
Query: 72 EVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKD 131
E Q+ + E SI +LQ + KI K W+ + V +K +
Sbjct: 75 ERQVLESF--EESIPMRDLQGH---PLAKIAIGWMRKKGWIAITGGVVQKTGKTAPGPDE 129
Query: 132 --LLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGP------NYAPKRKKAATDL 183
+ + G E ++ L R L + + Y+V P + ++ A L
Sbjct: 130 AAFVRLAEKGEIADGEGVADLAKRGLAIEEETVAYTVSITPRGRELLSQGLDLREEAGTL 189
Query: 184 TRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFV 243
TRE + G+WK L + Y+ + A G +HP ++ +++ I MGFEEM + V
Sbjct: 190 TREQILSGEWKSLPLRRYDVTKLPKRAYPGKVHPYQRIIDEMRRILFDMGFEEM-SGGIV 248
Query: 244 ESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGG-YGSRGYG 302
+SSFWNFDALFQPQ HPAR+ DTFFL E R LP Y ERV+ +HE GG S G+G
Sbjct: 249 QSSFWNFDALFQPQDHPAREMQDTFFLGE---RRPLPAGY-ERVRDMHEHGGETSSTGWG 304
Query: 303 YEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVFLHRSCFQK 349
W E+A + +LRTHTT++S ++ LA P P K F +++
Sbjct: 305 GTWSAEKAEQCVLRTHTTSLS---IQHLAAHPKPPVKAFCIGRVYRR 348
>sp|P57693|SYFA_THEAC Phenylalanine--tRNA ligase alpha subunit OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=pheS PE=3 SV=1
Length = 499
Score = 148 bits (373), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 167/332 (50%), Gaps = 18/332 (5%)
Query: 27 GFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSIS 86
G ++ + I L +D + + +T+ L+ EGK+Y EG PE+ L+ + G ++
Sbjct: 37 GLSDREIASAISWLEVKGLLDVERREIKTYALSSEGKRYLREGLPELVLYRKLKERGEMT 96
Query: 87 KDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEE 146
DE+ + L P ++I +Q K ++ + +E +++ +Q+ +
Sbjct: 97 MDEI-RDLMPDTYRIALAQLAKFGITPKEGKLIYRNSGIEAAIEERQRFLQSMDPKNTAM 155
Query: 147 ISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAATDLTRENL---------QKGDWKELE 197
I + R ++ + + + + + A +A + E L G+WK
Sbjct: 156 IDHFRHRSGVIDEKIRTERIVRLNDSA---YEAIAEFGGEGLIGSLDPSIIASGEWKTKN 212
Query: 198 FKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQ 257
F++Y+ N+ HP+ + +++++IFL MGF EM +++ES+ W+ D+LF PQ
Sbjct: 213 FRKYDLNSPSSVIRSSLKHPMTYLIEEIREIFLNMGFTEM-GGHYIESTLWDMDSLFIPQ 271
Query: 258 QHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRGYGYEWKREEANKNLLRT 317
HPARD DTF++E S + PE ++++++HE G G G+GY W EA K +LRT
Sbjct: 272 DHPARDMQDTFYVEADSFDIDHPE-ISKKIRKIHEKGFDGYSGWGYRWSDAEARKLVLRT 330
Query: 318 HTTAVSSRMLKALAEKP---FAPKKVFLHRSC 346
HTT ++R L E P F+ +KVF H S
Sbjct: 331 HTTVSTARYLYENNEPPQAIFSVEKVFRHESV 362
>sp|A2ST81|SYFA_METLZ Phenylalanine--tRNA ligase alpha subunit OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=pheS
PE=3 SV=1
Length = 474
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 155/290 (53%), Gaps = 21/290 (7%)
Query: 58 LTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQ 117
LT EG+KYA EG PE Q+ ++ +GSI EL K + KI K WV +
Sbjct: 61 LTEEGEKYAKEGLPERQILNSI--DGSIPMSELTKN---PLSKIAIGWLRKKNWVTIKDG 115
Query: 118 VSRKVQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPK-- 175
+ +N +L L+ + +E++ +++ +WK G A
Sbjct: 116 IVFVNENTAVGEDELALKNPVPGTPACKELAKRGLVEVVEKTSWKIALTTDGEKIAKDGL 175
Query: 176 --RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMG 233
R++ AT LTRE + G+WK L ++Y+ + + GG +HP ++ +++D+ +MG
Sbjct: 176 DLREEVAT-LTREQILSGEWKSLPLRKYSIDKLPKKIYGGRVHPNQQILDEIRDLLFEMG 234
Query: 234 FEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELP-EDYVERVKRVHE 292
F E + V++SFWNFD+L+QPQ HPAR+ DTF L E ELP + E+++ +H+
Sbjct: 235 FTEF-HGSIVQNSFWNFDSLYQPQDHPAREMQDTFHLAE-----ELPLPNGWEKIRDIHK 288
Query: 293 SGG-YGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVF 341
GG GS G+G EW E K +LRTH+T++S ++ LAE P P K F
Sbjct: 289 FGGDTGSTGWGGEWSPEVGKKCVLRTHSTSLS---IQYLAEHPNPPLKAF 335
>sp|O58391|SYFA_PYRHO Phenylalanine--tRNA ligase alpha subunit OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pheS PE=3 SV=1
Length = 499
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/344 (32%), Positives = 164/344 (47%), Gaps = 38/344 (11%)
Query: 28 FDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVPAEGSISK 87
D V+ + +L + +R LT GK+Y G PE++ + +G ++
Sbjct: 31 LDQVAVMRALLTLQSQGLAKVHEERRRMIKLTETGKRYIEIGLPEIRALKILKEKGKVTL 90
Query: 88 DELQKKLDPAVFKIGCSQAGKNKWVEMGK-------QVSRKVQNVEDKVKDLLLQVQNGH 140
++L+ L K K W E+ K ++S K + E + D+ L+V +
Sbjct: 91 NDLKDVLSDEELKAIVGVLRKEGWAEVSKTKEGLTLKLSEKGKKAEKRAIDIALEVLSKG 150
Query: 141 ALSKEEIS------SLKARKLI---------VPQTWKGYS-VRKGPNYAPKRKKAATDLT 184
+S EEI LK RK+ V T KG V KG K+ + LT
Sbjct: 151 EVSVEEIEKIISVKELKRRKIAEEEEKVIRNVEITDKGLELVEKGIEL----KREVSILT 206
Query: 185 RENLQKGDWKELEFKEYNFNAKGQPAEGGHLHP----LLKVRKQLKDIFLQMGFEEMPTN 240
E + G W+E+EFK +N A + G P L K+R++L ++MGF EM +
Sbjct: 207 PELIVTGKWREVEFKPFNIKAPVKKIYPGKKQPYRVFLDKIRRRL----IEMGFIEMTVD 262
Query: 241 NFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRG 300
+ +E+ FWNFDALFQPQ HPAR+ DT+ L+ P E+ V +VK HE G GSRG
Sbjct: 263 SLIETQFWNFDALFQPQNHPAREWTDTYQLKYPEKGYLPDENLVSKVKEAHERGLAGSRG 322
Query: 301 YGYEWKREEANKNLLRTHTTAVSSRMLKALAEKP---FAPKKVF 341
+GY W E A + R H TA+S+R L E P F ++VF
Sbjct: 323 WGYVWSPERAMLLMPRAHATALSARELAKGIEIPGKYFTIQRVF 366
>sp|O26837|SYFA_METTH Phenylalanine--tRNA ligase alpha subunit OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pheS PE=1 SV=1
Length = 511
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 99/149 (66%), Gaps = 2/149 (1%)
Query: 180 ATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPT 239
AT +T E+L+ G W++L ++ YN +A+ G +HPL ++ +++ IFL++GF E
Sbjct: 212 ATQVTHEHLKSGAWRKLHYRGYNIDAEYPLVYPGKMHPLRRIIDEIRSIFLKLGFTE-SR 270
Query: 240 NNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGG-YGS 298
VES+FWNFD LFQPQ H AR+ DTF+++ P+ T ED V V+ HE+GG GS
Sbjct: 271 GPIVESAFWNFDCLFQPQDHAAREMQDTFYVKNPAVTDLPCEDLVRAVQDAHETGGSTGS 330
Query: 299 RGYGYEWKREEANKNLLRTHTTAVSSRML 327
G+ YEW R+ A +++LRTHTT VS+R L
Sbjct: 331 EGWQYEWDRDVARQSVLRTHTTCVSARFL 359
>sp|Q0W0X9|SYFA_UNCMA Phenylalanine--tRNA ligase alpha subunit OS=Uncultured methanogenic
archaeon RC-I GN=pheS PE=3 SV=1
Length = 495
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 155/308 (50%), Gaps = 29/308 (9%)
Query: 56 WVLTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMG 115
+VLT EG+KYAAEG PE + A+PA+G I+ ++L+K+ PA I + W +
Sbjct: 58 YVLTDEGRKYAAEGLPERVIHDALPADG-ITLNDLKKQFPPATVNIAMGWLRQKGWAKFE 116
Query: 116 KQ------VSRKVQNVEDKVKDLLLQVQNGHA---LSKEEISSLKARKLI---------V 157
K+ + +K D+ +L + NG + + I L R LI V
Sbjct: 117 KKDGDMFLLPQKADASADE--KMLAAISNGESQKGFDAKVIKDLLKRNLIELRETKTKFV 174
Query: 158 PQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHP 217
T G +V++ + + LT E + G W+ F++++ + Q GG H
Sbjct: 175 KITDSGLAVKQA---GIEITEEIAQLTPEMIATGSWQGKTFRKFDVSLPVQTEYGGRKHI 231
Query: 218 LLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTR 277
L +K ++MGF+EM V++ F+ D LF PQ HPAR D F L+EP
Sbjct: 232 LRMGMDAVKRTLIEMGFKEM-EGPMVDAEFYVNDLLFMPQDHPARTHWDQFNLKEPKYIH 290
Query: 278 ELPEDYVERVKRVHESGG-YGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKP-- 334
LP++ VERV+RVH GG GS G+ YEW A K +LR HTT++++R L ++ P
Sbjct: 291 SLPQNLVERVRRVHRDGGSSGSLGWNYEWDETIARKLVLRGHTTSLTARYLAKHSKPPQK 350
Query: 335 -FAPKKVF 341
F+ +VF
Sbjct: 351 YFSVSQVF 358
>sp|B6YTJ4|SYFA_THEON Phenylalanine--tRNA ligase alpha subunit OS=Thermococcus onnurineus
(strain NA1) GN=pheS PE=3 SV=1
Length = 500
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 147/307 (47%), Gaps = 23/307 (7%)
Query: 58 LTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQ 117
LT GKKYA G PE + + +G ++ D+L++ L K K W + K+
Sbjct: 61 LTETGKKYAQIGLPEWRALKVLRKKGKVTLDDLKEVLSEDELKPIVGLLRKEGWASIRKE 120
Query: 118 VSRKVQNVE-----------DKVKDLLLQVQNGHALSKEEI---SSLKARKLIVPQTWKG 163
+ V + D+ LL + + EEI + LK RK+
Sbjct: 121 DGKLVLEITENGLKAEERAIDRALKLLAEKEAIPVSEIEEIIKVNDLKRRKIAEEDIVTE 180
Query: 164 YSVRKGP------NYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHP 217
+V P N + K+ + LT E ++ G W+E+EFK +N A + G P
Sbjct: 181 RTVEITPEGEELANKGLELKEEVSTLTPELIKSGKWREVEFKRFNIQAPVRRIYPGKKQP 240
Query: 218 LLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTR 277
+++ ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+ L+ P +
Sbjct: 241 YRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYPKSGY 300
Query: 278 ELPEDYVERVKRVHESGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKP--- 334
++ VERVK HE G GSRG+GY W E A + R H TA+S R L E P
Sbjct: 301 LPNKELVERVKTAHERGLAGSRGWGYVWSPERAMLLMPRAHGTALSGRQLAKGVEIPGKY 360
Query: 335 FAPKKVF 341
F ++VF
Sbjct: 361 FTIQRVF 367
>sp|C5A5Y9|SYFA_THEGJ Phenylalanine--tRNA ligase alpha subunit OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=pheS PE=3 SV=1
Length = 499
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 149/306 (48%), Gaps = 22/306 (7%)
Query: 58 LTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQ 117
LT GKKYA G PE + + G ++ D+L++ L K K W + K+
Sbjct: 61 LTETGKKYAEIGLPEWRALKLLRERGKVTLDDLREVLSDDELKPIVGLLRKEGWASVRKE 120
Query: 118 VSRKVQNVEDK--------VKDLLLQVQNGHALSKEEIS------SLKARKLIVPQTWKG 163
+ + + +K + L + + + +EI LK RK+ +T
Sbjct: 121 DGKLILEITEKGLEAEERPIDRALKLLAEKNVVPVKEIEKLIPVKELKRRKIGEEETVTE 180
Query: 164 YSVRKGP---NYAPK--RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPL 218
+V P APK K+ + LT E ++ G W+E+EF+ ++ A + G P
Sbjct: 181 RTVEITPAGEELAPKVELKREVSVLTPELIKSGKWREVEFRRFDIKAPVRRIYPGKKQPY 240
Query: 219 LKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRE 278
+++ ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+ L+ P +
Sbjct: 241 RAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYPKSGFL 300
Query: 279 LPEDYVERVKRVHESGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKP---F 335
E+ VERVK HE G GSRG+GY W E A + R H TA+S R L E P F
Sbjct: 301 PEEELVERVKTAHERGLAGSRGWGYVWSPERAMLLMPRAHGTALSGRQLAKGVEIPGKYF 360
Query: 336 APKKVF 341
++VF
Sbjct: 361 TIQRVF 366
>sp|Q8U261|SYFA_PYRFU Phenylalanine--tRNA ligase alpha subunit OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pheS
PE=3 SV=1
Length = 499
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 155/311 (49%), Gaps = 31/311 (9%)
Query: 58 LTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGK- 116
LT G+KY G PE++ + ++ + DEL+ L K K WV++ K
Sbjct: 60 LTDLGRKYIQMGLPEIRALNVLKSKKKVKLDELRGVLTEDELKPIVGILRKEGWVKVEKT 119
Query: 117 ------QVSRKVQNVEDKVKDLLLQV--QNGHALSKE-----EISSLKARKL-------- 155
+++ + +N E++ D L++ + +A S+E I+ LK RK+
Sbjct: 120 PEGLVLEITERGENPEERPIDKALKILSEKEYATSEEISKIVPINELKRRKVAQEEEVVE 179
Query: 156 -IVPQTWKGYS-VRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGG 213
I T KG V+KG K+ T LT E + G W+E+EFK +N A + G
Sbjct: 180 RIAEITEKGVELVKKGIEL----KREVTSLTPELIASGKWREVEFKPFNIKAPVKKIYPG 235
Query: 214 HLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEP 273
P +++ ++MGF E+ ++ +E+ FWNFDALFQPQ HPAR+ DT+ L+ P
Sbjct: 236 KKQPYRVFLDKIRRKLIEMGFIEITVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYP 295
Query: 274 STTRELPEDYVERVKRVHESGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEK 333
+ VERVK HE G GSRG+GY W E A + R H TA+S+R L E
Sbjct: 296 EKGYLPNRELVERVKEAHERGLAGSRGWGYVWSPERAMFLMPRAHATALSARQLAKGIEI 355
Query: 334 P---FAPKKVF 341
P F ++VF
Sbjct: 356 PGKYFTIQRVF 366
>sp|Q9UYX3|SYFA_PYRAB Phenylalanine--tRNA ligase alpha subunit OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=pheS PE=3 SV=1
Length = 500
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 178/370 (48%), Gaps = 40/370 (10%)
Query: 3 EEAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEG 62
E+ +L + K E+ S E D V+ I +L I + K + VLT G
Sbjct: 7 EKLVLLTIAKLEKASVE-EIVKETRLDQVAVMRAILTLEKEGLIKLHERKEKIIVLTDIG 65
Query: 63 KKYAAEGSPEVQLFLAVPAEGSISKDELQKKLD----PAVFKI----GCSQAGKNKWVEM 114
K+Y+ G PE++ + + DEL+ L A+ I G + K++ +
Sbjct: 66 KEYSKIGLPEIRALRVLREKKKAYLDELKDVLREDELKAIVGILRREGLANVRKDE-KGL 124
Query: 115 GKQVSRKVQNVEDKVKDLLLQVQNGHA-LSKEEIS------SLKARKL---------IVP 158
+++ K + + ++ D+ L++ + +S +EIS LK RK+ V
Sbjct: 125 VLEITEKGEKLGERPIDIALKLLSEKGEVSVDEISRIIDVKDLKRRKIAREDERVERTVE 184
Query: 159 QTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHP- 217
T KG +K + + K+ T LT E + G W+E+E K +N A + G P
Sbjct: 185 ITEKG---KKLVSKGIELKREVTRLTPELIASGKWREVELKPFNIKAPVKRIYPGKKQPY 241
Query: 218 ---LLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPS 274
L K+R++L ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+ L+ P
Sbjct: 242 RVFLDKIRRRL----IEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYPE 297
Query: 275 TTRELPEDYVERVKRVHESGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKP 334
E V RVK HE G GSRG+GY W E A + R H TA+S+R L E P
Sbjct: 298 KGYLPDESLVSRVKEAHERGLAGSRGWGYVWSPERAMLLMPRAHATALSARQLAKGIEIP 357
Query: 335 ---FAPKKVF 341
F ++VF
Sbjct: 358 GKYFTIQRVF 367
>sp|Q76KA8|SYFA_PYRKO Phenylalanine--tRNA ligase alpha subunit OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=pheS PE=1 SV=1
Length = 501
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 149/312 (47%), Gaps = 32/312 (10%)
Query: 58 LTGEGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQ 117
LT G KYA G PE + + +G + D+L+ L K + W + K+
Sbjct: 61 LTETGMKYAQIGLPEWRALKVLREKGKATLDDLKDVLSEDELKPIVGLLRREGWANVRKE 120
Query: 118 VSRKVQNVEDKVKD---------LLLQVQNGHALSKE-----EISSLKARKL-------- 155
+ V + +K ++ L L + G KE ++ LK RK+
Sbjct: 121 DGKLVLEITEKGREASERPIDKALKLLAERGEVPVKEIEKLVPVNELKRRKIGEEDVITE 180
Query: 156 -IVPQTWKGYS-VRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGG 213
+ T KG V+KG KK + LT E ++ G W+E+EF++++ A + G
Sbjct: 181 RVAEITEKGEELVKKGLEL----KKEVSVLTPELIKSGKWREVEFRKFDIKAPVRRIYPG 236
Query: 214 HLHPLLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEP 273
P +++ ++MGF EM ++ +E+ FWNFDALFQPQ HPAR+ DT+ L+ P
Sbjct: 237 KKQPYRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYP 296
Query: 274 STTRELPEDYVERVKRVHESGG-YGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAE 332
E+ V RVK HE GG GSRG+GY W E A + R H TA+ +R L E
Sbjct: 297 KVGSLPDEELVARVKAAHEHGGDTGSRGWGYVWSPERAMLLMPRAHGTALDARQLAKGVE 356
Query: 333 KP---FAPKKVF 341
P F ++VF
Sbjct: 357 IPGKYFTIQRVF 368
>sp|Q2FLL0|SYFA_METHJ Phenylalanine--tRNA ligase alpha subunit OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=pheS PE=3 SV=1
Length = 478
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 144/297 (48%), Gaps = 30/297 (10%)
Query: 64 KYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQ 123
+Y EG PE QL+ + SI+ KIG + WV++ + ++
Sbjct: 67 QYLKEGLPERQLYDSFSESASIADLNTHPHA-----KIGLGWMKRLGWVKI--EAGNVIK 119
Query: 124 NVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPKRKKAAT-- 181
+ + L ++N A + L R L+ + SVR + KK A
Sbjct: 120 TGDPAPSPIELALKNPDAAPADIKKDLLKRGLVTEEE----SVRYTITITDEGKKLAAAG 175
Query: 182 --------DLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMG 233
LT + + G WK+L + Y+ +P G +HP ++ +++ I L MG
Sbjct: 176 ITLTQETGTLTADQISSGAWKDLSLRRYDITKHPRPVWPGKIHPYQRMIDEMRRILLDMG 235
Query: 234 FEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHES 293
F E+ + ++ +FWNFDALFQPQ HPAR+ DTF L + +ELP + E+V+ +HES
Sbjct: 236 FTEL-HGSIIQGAFWNFDALFQPQDHPAREMQDTFHL---AGKQELPVGW-EKVRDMHES 290
Query: 294 GG-YGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVFLHRSCFQK 349
GG S G+G +W E+A +LRTHTT++S ++ LA P P K F +++
Sbjct: 291 GGETSSTGWGGKWDPEKAKATVLRTHTTSLS---IQHLAAHPEPPVKAFCIGRVYRR 344
>sp|C6A236|SYFA_THESM Phenylalanine--tRNA ligase alpha subunit OS=Thermococcus sibiricus
(strain MM 739 / DSM 12597) GN=pheS PE=3 SV=1
Length = 503
Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 157/356 (44%), Gaps = 44/356 (12%)
Query: 21 NFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGKKYAAEGSPEVQLFLAVP 80
E G D V+ I L + ++ +T G+KYA G PE + +
Sbjct: 24 ELVKETGLDQVAVMRAILWLQSKGLAKLHEKQKRVVKITELGEKYAKIGLPERRALKLLV 83
Query: 81 AEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDLLLQVQNGH 140
+G ++ ++L++ L + K W + K ED V L L +
Sbjct: 84 EKGKVTLEDLREVLSEDELRPIIGILRKEGWATVRK---------EDDVLTLELTEKGKE 134
Query: 141 ALSKE-----------EISSLKARKLIVPQTWKGYSVRK-----------------GPNY 172
AL+KE E ++AR++ + K RK G
Sbjct: 135 ALTKERPIDIALKVLAEKREVEAREIEELLSLKELKTRKIGEEDAKAEREVEITDEGLRI 194
Query: 173 APK---RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIF 229
A + K+ + LT E ++ G WK +EFK +N +A + G P +++
Sbjct: 195 ASEGLELKEEVSILTPELIKSGGWKNVEFKHFNIHAPVKRLYPGKKQPYRTFLDKIRRKL 254
Query: 230 LQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKR 289
++MGF EM + +E+ FWNFDALFQPQ HPARD DT+ L+ P E VERVK
Sbjct: 255 IEMGFIEMTVESLIETQFWNFDALFQPQNHPARDWTDTYQLKYPKYGFLPDETLVERVKA 314
Query: 290 VHESGGY-GSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKP---FAPKKVF 341
HE G GSRG+GY+W A + R H TA+S+R L + P FA ++VF
Sbjct: 315 SHEHGWITGSRGWGYKWDPRTAMLLMPRAHATALSARQLGKGVQIPGKYFAIQRVF 370
>sp|A6VH81|SYFA_METM7 Phenylalanine--tRNA ligase alpha subunit OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pheS PE=3
SV=1
Length = 501
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 105/177 (59%), Gaps = 7/177 (3%)
Query: 177 KKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEE 236
K+ T LTRE + G W + + Y+ + HP+ K+ +++ ++ + MGF+E
Sbjct: 195 KEEITQLTREMIVSGKWNDYTIRPYDAKIPTEEIYPVKAHPMSKIIQEVNEVLISMGFKE 254
Query: 237 MPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGY 296
+ + V++ FWNFD LF+PQ HPARD DTFF++ P+T +P+D +E+VK +HE G
Sbjct: 255 VKSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNTGI-VPKDLLEKVKGIHECGTI 312
Query: 297 G----SRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFA-PKKVFLHRSCFQ 348
G S+G+ Y++ + + + +LRTHTT S + L +L+E P+KVF F+
Sbjct: 313 GSEKISKGWCYKFDEKVSERTVLRTHTTVSSIKYLASLSETERENPQKVFCIDRVFR 369
>sp|Q57911|SYFA_METJA Phenylalanine--tRNA ligase alpha subunit OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pheS PE=3 SV=1
Length = 480
Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 102/169 (60%), Gaps = 9/169 (5%)
Query: 181 TDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTN 240
T LTR+ + G WK+ + Y+ +P +HPL ++ +++K+I L MGF+E+ +
Sbjct: 193 TQLTRDIIISGKWKKAYIRPYDVKVPTKPIYPAKVHPLTRIIREVKEILLAMGFKEVKSP 252
Query: 241 NFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRG 300
VE+ FWNFD LF+PQ HPAR+ DTFFL+ P+ ++PED + +VK VHE R
Sbjct: 253 -IVETEFWNFDMLFEPQDHPAREMQDTFFLKYPNEG-DIPEDLLSKVKEVHE------RC 304
Query: 301 YGYEWKREEANKNLLRTHTTAVSSRMLKALA-EKPFAPKKVFLHRSCFQ 348
+ Y++ + + +LRTHTTA S R L +L+ E+ P KVF F+
Sbjct: 305 WKYKFDENVSRRLILRTHTTASSIRYLASLSDEEKNKPHKVFCIDRVFR 353
>sp|P95961|SYFA_SULSO Phenylalanine--tRNA ligase alpha subunit OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pheS
PE=3 SV=2
Length = 468
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 175/347 (50%), Gaps = 21/347 (6%)
Query: 4 EAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEGK 63
EA + + K+ + ++S A + G + V+++I+ L Y+ + + +VLT EG+
Sbjct: 9 EAKILFFLKDLKKTNSVELAIKMGIPESSVLSLIELLREKGYVKTEVKSEKHYVLTEEGR 68
Query: 64 KYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQ 123
K G PE L + + +E++ L+ F I S A + +++ + + +
Sbjct: 69 KRKESGLPEDILINTLNGQEK-DLNEIKNILNKD-FNIAISWAKRKGLIDIKE--GKVIP 124
Query: 124 NVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVR--KGPNYAPKRKKAAT 181
V+ + L + N I+ LK R LI + K SV K P + + +
Sbjct: 125 KVKTYMSSEYLALSNLERADSNTINLLKKRGLIEEKERKIVSVELIKEPK---ESEIGIS 181
Query: 182 DLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNN 241
+L RE + G+WK+ + K+YN A H + +++KDI + +GF+E+ T
Sbjct: 182 NLNRELIISGEWKKYKLKKYNVEAFPPYYTISKKHYFREFLEKVKDIMISLGFKEINTG- 240
Query: 242 FVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYGSRGY 301
++E F+NFD LFQPQ HPAR+ HD+F +E + +D + VK +HE + +
Sbjct: 241 YIEMEFYNFDLLFQPQDHPAREIHDSFSVEGSGKIED--KDLLNNVKEIHE------KFW 292
Query: 302 GYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVFLHRSCFQ 348
YEWK++ + +LR+ TTA ++R+ LA +P AP+KVF F+
Sbjct: 293 KYEWKQDITLRLMLRSQTTATTARV---LASRPKAPQKVFTLGKVFR 336
>sp|A4FW27|SYFA_METM5 Phenylalanine--tRNA ligase alpha subunit OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pheS PE=3
SV=1
Length = 501
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 101/176 (57%), Gaps = 13/176 (7%)
Query: 177 KKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEE 236
K+ T LTRE + G W + + Y+ + HP+ K+ +++ ++ + MGF+E
Sbjct: 195 KEEITQLTREMIVSGKWNDYFIRPYDAKIPTEELYPAKAHPMSKIIQEVNEVLISMGFKE 254
Query: 237 MPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGY 296
+ + V++ FWNFD LF+PQ HPARD DTFF++ P+T +P+D +E+VK +HE G
Sbjct: 255 VKSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNTGT-VPKDLLEKVKGIHECGTI 312
Query: 297 G----SRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAE-------KPFAPKKVF 341
G S+G+ Y + + + +LRTHTT S + L +L+E K F +VF
Sbjct: 313 GDEKISKGWCYNFDENVSERTVLRTHTTVSSIKYLASLSECERENAQKVFCIDRVF 368
>sp|Q6LX56|SYFA_METMP Phenylalanine--tRNA ligase alpha subunit OS=Methanococcus
maripaludis (strain S2 / LL) GN=pheS PE=3 SV=1
Length = 500
Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 104/177 (58%), Gaps = 7/177 (3%)
Query: 177 KKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEE 236
K+ T LTRE + G WK+ + Y+ + HP+ K+ +++ ++ + MGF+E
Sbjct: 195 KEEITQLTREMIVSGKWKDYFIRPYDAKIPTEDIYPAKAHPMSKIIQEVNEVLISMGFKE 254
Query: 237 MPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGY 296
+ + V++ FWNFD LF+PQ HPARD DTFF++ P+T + +P++ +E+VK +HE G
Sbjct: 255 VKSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPNTGK-VPKELLEKVKGIHECGTI 312
Query: 297 G----SRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFA-PKKVFLHRSCFQ 348
S+G+ Y++ + + +LRTHTT S + L +L+E P KVF F+
Sbjct: 313 DGEKISKGWCYKFDENVSKRTVLRTHTTVSSIKYLASLSESERENPHKVFCIDRVFR 369
>sp|Q9Y9I6|SYFA_AERPE Phenylalanine--tRNA ligase alpha subunit OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=pheS PE=3 SV=2
Length = 488
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 146/305 (47%), Gaps = 26/305 (8%)
Query: 58 LTGEGKKYAAEGSPEVQLFLAVPAEGS-ISKDELQKKLDPAVFKIGCSQAGKNKWVEMGK 116
LT G+ G PE +L L + G S +E+++ L I QA + V +
Sbjct: 65 LTERGRDALERGLPEEKLVLFLAGRGGEASVEEVRRALGEEA-GIALGQAARKGLVVIAG 123
Query: 117 QVSR-KVQNVE-----DKVKDLLLQVQNGH--ALSKEEISSLKARKLIVPQTWKGYSVRK 168
V R V E +K LL V +G + E + +R LI + + +R
Sbjct: 124 GVVRLAVDQAEALKTITPLKKLLENVASGSKPTVGDELLREALSRGLIRREARRSIVLRL 183
Query: 169 GPNYAPKRKKA---ATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQL 225
N A +A A LTR+ L+ G+W+ L FK YN A+ H L + ++L
Sbjct: 184 KVNPAEALARARVEAAVLTRDMLKSGEWRRLRFKPYNVKAEPPRVLPARRHFLAEFIERL 243
Query: 226 KDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELP--EDY 283
+DI ++GF E+ VE +NFD LFQ Q HPAR+ HD+ +++ P +L D
Sbjct: 244 RDILRELGFREV-RGPLVELELFNFDVLFQAQDHPAREIHDSLWIKSPRRG-DLSGYSDL 301
Query: 284 VERVKRVHESGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVFLH 343
VERV VHE RG+ Y W E A++ +LR+ TTAVS+R+ LA +P P + F
Sbjct: 302 VERVASVHE------RGWKYRWSPEVASRYILRSQTTAVSARI---LATRPNPPARFFTV 352
Query: 344 RSCFQ 348
F+
Sbjct: 353 GKVFR 357
>sp|A6UQD9|SYFA_METVS Phenylalanine--tRNA ligase alpha subunit OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pheS PE=3 SV=1
Length = 501
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 47/338 (13%)
Query: 35 NVIKSLHGFRYIDAQDIKRETWVLTGE------------------GKKYAAEGSPE--VQ 74
N+I S YI+ + I R + LTG GK G PE V
Sbjct: 20 NIIDSEGLLEYIEKEKIMRAAFWLTGRDFLNIIEKKSKFLELTELGKNAIESGFPERKVS 79
Query: 75 LFLAVPAEGSISKDELQKKL--DPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDL 132
+L S +L K L D A +G + + +E G + K +D ++L
Sbjct: 80 NYLKTNKLDSFPIKDLSKVLEKDEAGAALGNLKKKELVTIEKG-NIFFKSLEYKDLEEEL 138
Query: 133 LLQVQ---NGHALSKEEI---SSLKARKLI---------VPQTWKGYSVRKGPNYAPKRK 177
L +V N SKEEI +LK R + T KG K P + K
Sbjct: 139 LKKVSLYPNLEEYSKEEILTIETLKKRGFLKLNEVTEREFEITVKGLEYIKNP---IEIK 195
Query: 178 KAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEM 237
+ T +TR+ + G WKE+ + Y+ + HP+ K+ +++ ++ MGF E+
Sbjct: 196 EEVTQITRDLIVSGKWKEVSIRPYDAKIPTEEIYPAKAHPMSKIIEEVTEVLTSMGFSEV 255
Query: 238 PTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYG 297
+ V++ FWNFD LF+PQ HPARD DTFF++ P T +P + +++VK +HE G
Sbjct: 256 KSQ-IVQTEFWNFDTLFEPQDHPARDMQDTFFVKYPDTGI-VPHELLKKVKSIHECGKIE 313
Query: 298 ----SRGYGYEWKREEANKNLLRTHTTAVSSRMLKALA 331
S+G+ Y++ E + + +LRTHTT S + L +L+
Sbjct: 314 NEKISKGWCYKFDEEVSKRTVLRTHTTVSSIKYLSSLS 351
>sp|A4YIL1|SYFA_METS5 Phenylalanine--tRNA ligase alpha subunit OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=pheS PE=3 SV=1
Length = 465
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 168/346 (48%), Gaps = 34/346 (9%)
Query: 3 EEAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLH--GFRYIDAQDIKRETWVLTG 60
E IL +L++ ++ S S A G + V ++I +L G + +++ R+ LT
Sbjct: 6 EIKILDFLKRRKE-STSQEIAEGTGLPLSSVFSIIATLESKGIVKVISEE-TRKVVRLTD 63
Query: 61 EGKKYAAEGSPEVQLFLAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEMGK---- 116
EGK +G PE +L + + EL+ L F+IG A + + +
Sbjct: 64 EGKLRTEQGLPEDRLVTLLNGR-PLKIQELRNALGKD-FEIGFGWARRKGLITLENDTVI 121
Query: 117 -QVSRKVQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVRKGPNYAPK 175
+VS+ V +KDL Q G + E + L RKL+ + K V+ +
Sbjct: 122 PKVSQYVSPEYTALKDL----QAGKEPTGEVLEILLRRKLVEVKEEKMLRVQLLREV--E 175
Query: 176 RKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFE 235
+ A +T E L G W+E EFK YN A G H +++KD+ + +GF
Sbjct: 176 TRPAELYVTHEMLTTGSWREYEFKPYNVEANPPFFPIGKTHYFRDFIEKVKDLMVGLGFV 235
Query: 236 EMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELP-EDYVERVKRVHESG 294
E+ + +FVE+ F+NFD LFQPQ HPAR+ HD+F +E LP D V +VK VHE
Sbjct: 236 EV-SGDFVETEFFNFDMLFQPQDHPAREIHDSFVIEGKGN---LPGSDLVRKVKEVHE-- 289
Query: 295 GYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKV 340
+ + Y W + A + +LR+ TTAV++R+L APK++
Sbjct: 290 ----KWWRYSWSEDNARRLVLRSQTTAVTARVLSG------APKRI 325
>sp|Q971D7|SYFA_SULTO Phenylalanine--tRNA ligase alpha subunit OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=pheS
PE=3 SV=1
Length = 469
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 176/351 (50%), Gaps = 27/351 (7%)
Query: 3 EEAILGYLEKNEQISDSGNFAAERGFDHNDVVNVIKSLHGFRYIDAQDIKRETWVLTGEG 62
E IL YL K + S + + + + V ++ + L YI+ ++ K + LT EG
Sbjct: 6 EIKILEYLSKKREAS-AEDISKQLNIPIESVFSISQLLKEKGYIEVEEKKVIKYELTDEG 64
Query: 63 KKYAAEGSPEVQLF-LAVPAEGSISKDELQKKLDPAVFKIGCSQAGKNKWVEM-GKQVSR 120
K+ EG PE +L L E I EL+ KL F+I A + V++ G V
Sbjct: 65 KRRLKEGFPEEKLVKLLDGKEKKIH--ELKDKLGRD-FEISIGWAKRKGLVKIDGDTVIP 121
Query: 121 KVQNVEDKV-KDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSVR--KGPNYAPKRK 177
V++ E K K+ L+ N +K+ + L RKL++ + K ++R + P + K
Sbjct: 122 LVKDYEAKEEKEALI---NPEKANKDILQQLLNRKLLIKKEEKILNIRLIREP---LEIK 175
Query: 178 KAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEM 237
A LT E L G+WK+ +EYN A G H + ++L+D+ +GF+E+
Sbjct: 176 PALIFLTPELLASGEWKKYALREYNVEAYPPFYPIGKKHFFKEFLERLRDLMRDLGFKEV 235
Query: 238 PTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGGYG 297
+++VE F+NFD LFQ Q HPAR+ HD+F + + E ++RVK++HE
Sbjct: 236 -YSDYVEIEFYNFDLLFQAQDHPAREIHDSFAISGKGKLTD--EKLIQRVKQIHE----- 287
Query: 298 SRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVFLHRSCFQ 348
RG+ Y W + + +LR+ TTA ++R+ LA +P P +VF F+
Sbjct: 288 -RGWKYNWDVNISMRLMLRSQTTATTARV---LASRPKPPIRVFTIGKVFR 334
>sp|Q9HMK4|SYFA_HALSA Phenylalanine--tRNA ligase alpha subunit OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=pheS PE=3
SV=1
Length = 502
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 183 LTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNF 242
LT E L G+W ++EF +YN A G H L + +++ D+ + MGF+EM
Sbjct: 202 LTPELLASGEWADVEFADYNVAADAADHTPGKTHVLRQAAERVTDVLVGMGFQEM-AGPH 260
Query: 243 VESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVH-ESGGYGSRGY 301
V++ F+ D LF PQ HPAR+ D F L P+ ELP+ VERV+R H E G GY
Sbjct: 261 VDADFYINDCLFMPQDHPARNHWDRFALSNPARIDELPDALVERVERAHREGAGDDGDGY 320
Query: 302 GYEWKREEANKNLLRTHTTAVSSRMLKALAEKPF-APKKVF 341
W + A LR HTT++++R L LA+ AP + F
Sbjct: 321 HSPWDEDFARALALRGHTTSLTARHLAGLADADVEAPARYF 361
>sp|B0R806|SYFA_HALS3 Phenylalanine--tRNA ligase alpha subunit OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=pheS PE=3 SV=1
Length = 502
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 87/161 (54%), Gaps = 3/161 (1%)
Query: 183 LTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNF 242
LT E L G+W ++EF +YN A G H L + +++ D+ + MGF+EM
Sbjct: 202 LTPELLASGEWADVEFADYNVAADAADHTPGKTHVLRQAAERVTDVLVGMGFQEM-AGPH 260
Query: 243 VESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVH-ESGGYGSRGY 301
V++ F+ D LF PQ HPAR+ D F L P+ ELP+ VERV+R H E G GY
Sbjct: 261 VDADFYINDCLFMPQDHPARNHWDRFALSNPARIDELPDALVERVERAHREGAGDDGDGY 320
Query: 302 GYEWKREEANKNLLRTHTTAVSSRMLKALAEKPF-APKKVF 341
W + A LR HTT++++R L LA+ AP + F
Sbjct: 321 HSPWDEDFARALALRGHTTSLTARHLAGLADADVEAPARYF 361
>sp|Q8ZX61|SYFA_PYRAE Phenylalanine--tRNA ligase alpha subunit OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=pheS PE=3 SV=1
Length = 489
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 144/302 (47%), Gaps = 23/302 (7%)
Query: 54 ETWVLTGEGKKYAAEGSPEVQLF-LAVPAEGSISK-----DELQKKLDPAVFKIGCSQAG 107
E + LT EG++ AAEG PE +L AV EG + E Q L + K+G G
Sbjct: 56 EFYELTEEGRQRAAEGLPEYKLLKSAVCREGRCTAHLSQHPEAQIALA-NLAKLGVKPRG 114
Query: 108 KNKWVEMGKQVSRK-VQNVEDKVKDLLLQVQNGHALSKEEISSLKARKLIVPQTWKGYSV 166
VE+ ++ +K V +E+K K L + KE I RK+ Q + +V
Sbjct: 115 NV--VELDEETYKKIVAMLEEKQKALAAPHSAPPEVLKEFIKRKLVRKIEKTQVYVKAAV 172
Query: 167 RKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLK 226
P K + T +T E++ G W+ K ++ N + H + ++
Sbjct: 173 ---PLELVKPAEVKTVITSEDIATGRWRNYTLKPFDLNIEPPEYPAPVPHFFNEFLDYVR 229
Query: 227 DIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVER 286
++ + +GFEE+ +E FWNFDALFQ Q HPAR+ HDTF+++ PE +E
Sbjct: 230 EVMIGLGFEEV-RGPVLEVEFWNFDALFQAQDHPAREVHDTFYVQWSGPLETPPEHLMES 288
Query: 287 VKRVHESGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVFLHRSC 346
V RVHE + Y+W R++A +LRT TTA + R ALAE+ KVF
Sbjct: 289 VGRVHEE------KWRYKWDRKKALNPVLRTQTTATTIR---ALAERGDGEYKVFTIGRV 339
Query: 347 FQ 348
F+
Sbjct: 340 FR 341
>sp|B2S4L0|SYFA_TREPS Phenylalanine--tRNA ligase alpha subunit OS=Treponema pallidum
subsp. pallidum (strain SS14) GN=pheS PE=3 SV=1
Length = 553
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 183 LTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNF 242
LT E L+ G WK + YN + G + + +KD + +GF+E
Sbjct: 263 LTVECLKSGAWKTQHLRRYNVHIPPARIIPGRSNAYADFLEHIKDRLVALGFQEF-DGPL 321
Query: 243 VESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGG-YGSRGY 301
VE+ FWN DALF PQ HPARD HD ++L+ P+ +PE ++ RV HE G GS G+
Sbjct: 322 VETDFWNADALFMPQFHPARDIHDVYYLKHPTHAPTIPEPFLSRVAATHERGADSGSLGW 381
Query: 302 GYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVFLHRSCFQ 348
Y + R+ + LLR+ TA+S+R L P K F CF+
Sbjct: 382 RYSFDRDFTRRLLLRSQGTALSARHLP----TAHIPGKYFGIARCFR 424
>sp|O83938|SYFA_TREPA Phenylalanine--tRNA ligase alpha subunit OS=Treponema pallidum
(strain Nichols) GN=pheS PE=3 SV=1
Length = 553
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 183 LTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHPLLKVRKQLKDIFLQMGFEEMPTNNF 242
LT E L+ G WK + YN + G + + +KD + +GF+E
Sbjct: 263 LTVECLKSGAWKTQHLRRYNVHIPPARIIPGRSNAYADFLEHIKDRLVALGFQEF-DGPL 321
Query: 243 VESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTRELPEDYVERVKRVHESGG-YGSRGY 301
VE+ FWN DALF PQ HPARD HD ++L+ P+ +PE ++ RV HE G GS G+
Sbjct: 322 VETDFWNADALFMPQFHPARDIHDVYYLKHPTHAPTIPEPFLSRVAATHERGADSGSLGW 381
Query: 302 GYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAPKKVFLHRSCFQ 348
Y + R+ + LLR+ TA+S+R L P K F CF+
Sbjct: 382 RYSFDRDFTRRLLLRSQGTALSARHLP----TAHIPGKYFGIARCFR 424
>sp|A4WHY5|SYFA_PYRAR Phenylalanine--tRNA ligase alpha subunit OS=Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321) GN=pheS PE=3 SV=1
Length = 488
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 141/311 (45%), Gaps = 42/311 (13%)
Query: 54 ETWVLTGEGKKYAAEGSPEVQLFLAVPAEG-----SISKDELQKKLDPAVFKIGCSQAGK 108
E + LT EG++ AAEG PE + +G S+S E L + K G G
Sbjct: 56 EVYELTEEGRRRAAEGLPEYNFLKSATCDGGRCVVSLSHPEAGVALA-NLAKFGVRPRGG 114
Query: 109 NKWVEMGKQVSRKVQN-----------VEDKVKDLLLQVQNGHALSKEEISSLKARKLIV 157
VE+ ++ RK+ + +E +D+L + + + E + + + +
Sbjct: 115 V--VELDEETYRKILSAVEEKQRYLSALEGAPRDVLQEFARRRIVRRVERTLIYVKAAVP 172
Query: 158 PQTWKGYSVRKGPNYAPKRKKAATDLTRENLQKGDWKELEFKEYNFNAKGQPAEGGHLHP 217
P+ SVR + T +T ++ G W+ K ++ + H
Sbjct: 173 PE-----SVRPA--------EVKTAITSADIATGRWRTYLLKPFDLGVEPPEYPAPVPHF 219
Query: 218 LLKVRKQLKDIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLEEPSTTR 277
+ ++++ + +GFEE+ +E FWNFDALFQ Q HPAR+ HDTF++
Sbjct: 220 FNEFLDYVREVMIGLGFEEV-RGPVLEVEFWNFDALFQAQDHPAREVHDTFYIRWEGPIE 278
Query: 278 ELPEDYVERVKRVHESGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLKALAEKPFAP 337
PE +E V RVHE + Y+W RE+A +LRT TTAV+ ++ALAE+
Sbjct: 279 APPEHLLEAVGRVHEE------KWRYKWSREKALNPVLRTQTTAVT---IRALAERGDGE 329
Query: 338 KKVFLHRSCFQ 348
KVF F+
Sbjct: 330 YKVFTIGRVFR 340
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,153,109
Number of Sequences: 539616
Number of extensions: 6134361
Number of successful extensions: 15090
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 13515
Number of HSP's gapped (non-prelim): 925
length of query: 349
length of database: 191,569,459
effective HSP length: 118
effective length of query: 231
effective length of database: 127,894,771
effective search space: 29543692101
effective search space used: 29543692101
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)