Query 018853
Match_columns 349
No_of_seqs 288 out of 941
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 07:04:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018853.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018853hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pxz_A Major pollen allergen J 100.0 1.3E-89 4.3E-94 673.9 24.6 282 67-349 1-284 (346)
2 3zsc_A Pectate trisaccharide-l 100.0 2.2E-67 7.5E-72 514.7 21.9 231 85-338 7-251 (340)
3 2qy1_A Pectate lyase II; GAG l 100.0 4.9E-64 1.7E-68 489.7 15.0 219 90-341 1-254 (330)
4 3vmv_A Pectate lyase; polysacc 100.0 5.1E-63 1.7E-67 481.7 18.1 215 89-336 2-249 (326)
5 1pcl_A Pectate lyase E; lyase 100.0 1.5E-61 5.2E-66 476.3 25.2 236 86-347 3-287 (355)
6 1vbl_A Pectate lyase 47; PL 47 100.0 7.5E-62 2.5E-66 486.9 21.5 244 84-347 5-344 (416)
7 1pe9_A Pectate lyase A; parall 100.0 6.1E-62 2.1E-66 479.9 19.5 227 90-339 13-293 (361)
8 2o04_A Pectate lyase, PL; hexa 100.0 3.3E-61 1.1E-65 480.1 21.9 243 83-347 4-338 (399)
9 1idk_A Pectin lyase A; signal, 100.0 2E-59 6.9E-64 461.8 19.1 218 86-340 2-283 (359)
10 1qcx_A Pectin lyase B; beta-he 100.0 1.6E-57 5.4E-62 448.3 18.5 219 86-341 2-284 (359)
11 1air_A Pectate lyase C, PELC; 100.0 2.8E-54 9.6E-59 424.3 15.6 218 90-342 3-266 (353)
12 3gq8_A Preneck appendage prote 98.6 1.3E-06 4.3E-11 91.1 19.3 127 173-319 136-281 (609)
13 3gqn_A Preneck appendage prote 98.5 1.2E-06 4E-11 93.2 13.5 149 150-319 107-281 (772)
14 2pyg_A Poly(beta-D-mannuronate 98.4 1.9E-05 6.7E-10 76.1 20.1 153 178-336 132-293 (377)
15 2inu_A Insulin fructotransfera 98.3 4.5E-06 1.5E-10 83.2 11.5 191 136-341 59-304 (410)
16 1dbg_A Chondroitinase B; beta 98.2 3.8E-05 1.3E-09 78.7 17.8 122 122-259 31-169 (506)
17 1ru4_A Pectate lyase, PEL9A; p 98.1 0.00042 1.4E-08 68.9 22.5 114 122-259 35-172 (400)
18 1bhe_A PEHA, polygalacturonase 98.1 3.3E-05 1.1E-09 75.7 13.8 91 174-288 177-273 (376)
19 2iq7_A Endopolygalacturonase; 98.0 8.7E-05 3E-09 71.9 14.2 98 174-288 126-224 (339)
20 3jur_A EXO-poly-alpha-D-galact 98.0 2.8E-05 9.5E-10 78.4 11.0 91 174-288 216-320 (448)
21 2iq7_A Endopolygalacturonase; 98.0 0.00011 3.7E-09 71.3 14.3 107 173-313 102-226 (339)
22 1ia5_A Polygalacturonase; glyc 97.9 0.00012 4E-09 71.1 14.2 98 174-288 130-228 (339)
23 1nhc_A Polygalacturonase I; be 97.9 0.00011 3.8E-09 71.1 13.8 108 174-288 103-223 (336)
24 2uvf_A Exopolygalacturonase; G 97.9 0.00014 4.8E-09 75.8 14.7 92 174-288 357-459 (608)
25 1bhe_A PEHA, polygalacturonase 97.8 0.0013 4.5E-08 64.3 19.3 136 173-339 153-307 (376)
26 1rmg_A Rgase A, rhamnogalactur 97.8 0.00039 1.3E-08 69.4 15.8 116 174-315 153-271 (422)
27 1ia5_A Polygalacturonase; glyc 97.8 0.00018 6.2E-09 69.7 12.8 107 173-313 106-230 (339)
28 1rmg_A Rgase A, rhamnogalactur 97.8 0.00061 2.1E-08 68.0 16.7 126 154-313 107-246 (422)
29 1czf_A Polygalacturonase II; b 97.8 0.00024 8.1E-09 69.6 12.9 72 213-288 177-249 (362)
30 1nhc_A Polygalacturonase I; be 97.8 0.00027 9.2E-09 68.4 13.1 71 213-288 173-252 (336)
31 1hg8_A Endopolygalacturonase; 97.7 0.00043 1.5E-08 67.4 13.6 105 174-288 130-236 (349)
32 1czf_A Polygalacturonase II; b 97.7 0.0003 1E-08 68.9 12.6 85 173-289 128-221 (362)
33 1hg8_A Endopolygalacturonase; 97.7 0.00069 2.4E-08 65.9 14.7 106 173-312 104-237 (349)
34 1ogo_X Dextranase; hydrolase, 97.7 0.00027 9.1E-09 73.5 12.3 99 178-288 331-441 (574)
35 2uvf_A Exopolygalacturonase; G 97.6 0.0062 2.1E-07 63.4 21.1 116 174-313 334-461 (608)
36 1pxz_A Major pollen allergen J 97.5 0.0044 1.5E-07 60.4 17.5 108 174-313 153-271 (346)
37 1k5c_A Endopolygalacturonase; 97.4 0.00065 2.2E-08 65.8 10.0 124 174-318 122-251 (335)
38 1gq8_A Pectinesterase; hydrola 97.3 0.0035 1.2E-07 60.5 14.6 113 124-258 21-153 (319)
39 1qcx_A Pectin lyase B; beta-he 97.3 0.0074 2.5E-07 59.2 17.0 110 215-335 123-255 (359)
40 1h80_A IOTA-carrageenase; hydr 97.3 0.0022 7.5E-08 65.0 13.5 123 155-288 109-243 (464)
41 1xg2_A Pectinesterase 1; prote 97.2 0.0039 1.3E-07 60.2 13.7 100 124-242 17-136 (317)
42 3zsc_A Pectate trisaccharide-l 97.2 0.02 6.8E-07 55.9 18.2 137 173-339 118-290 (340)
43 3jur_A EXO-poly-alpha-D-galact 97.2 0.0055 1.9E-07 61.7 14.4 118 173-313 192-322 (448)
44 3gqn_A Preneck appendage prote 97.1 0.018 6E-07 61.5 17.5 137 179-338 182-344 (772)
45 1x0c_A Isopullulanase; glycosi 97.1 0.0027 9.2E-08 65.5 11.1 102 177-288 290-403 (549)
46 3vmv_A Pectate lyase; polysacc 97.0 0.015 5E-07 56.4 15.5 141 174-338 123-289 (326)
47 3gq8_A Preneck appendage prote 97.0 0.017 6E-07 60.2 16.8 137 179-338 182-344 (609)
48 1dbg_A Chondroitinase B; beta 96.9 0.0053 1.8E-07 62.8 11.8 19 174-193 121-139 (506)
49 1k5c_A Endopolygalacturonase; 96.9 0.003 1E-07 61.1 9.2 127 150-312 67-220 (335)
50 2nsp_A Pectinesterase A; micha 96.8 0.021 7.2E-07 55.6 14.3 113 124-242 20-158 (342)
51 3uw0_A Pectinesterase; right-h 96.6 0.031 1E-06 55.0 14.3 126 124-258 46-198 (364)
52 1pcl_A Pectate lyase E; lyase 96.3 0.17 5.7E-06 49.5 17.3 127 173-313 135-279 (355)
53 2o04_A Pectate lyase, PL; hexa 96.3 0.084 2.9E-06 52.5 15.3 149 174-335 186-354 (399)
54 1idk_A Pectin lyase A; signal, 96.3 0.037 1.3E-06 54.3 12.5 112 215-335 123-255 (359)
55 1ru4_A Pectate lyase, PEL9A; p 96.0 0.36 1.2E-05 47.7 18.1 85 174-260 132-230 (400)
56 2qy1_A Pectate lyase II; GAG l 95.8 0.13 4.5E-06 49.6 13.6 141 174-335 116-272 (330)
57 2inu_A Insulin fructotransfera 95.4 0.12 4E-06 51.7 11.6 104 174-290 187-299 (410)
58 2pyg_A Poly(beta-D-mannuronate 95.3 0.18 6.2E-06 48.2 12.8 203 124-336 21-270 (377)
59 1vbl_A Pectate lyase 47; PL 47 95.2 0.2 6.9E-06 50.0 13.0 148 174-334 192-360 (416)
60 1air_A Pectate lyase C, PELC; 94.0 0.2 6.7E-06 49.0 9.4 142 174-334 133-284 (353)
61 1pe9_A Pectate lyase A; parall 93.9 0.2 6.8E-06 49.1 9.1 126 174-313 146-290 (361)
62 1h80_A IOTA-carrageenase; hydr 93.5 0.42 1.4E-05 48.3 11.0 87 174-287 170-268 (464)
63 1ogo_X Dextranase; hydrolase, 93.1 0.53 1.8E-05 48.8 11.2 85 174-261 350-444 (574)
64 3grh_A YBHC, acyl-COA thioeste 93.0 1.1 3.7E-05 44.9 12.9 103 124-241 91-250 (422)
65 1x0c_A Isopullulanase; glycosi 92.1 0.51 1.7E-05 48.6 9.5 48 213-261 355-406 (549)
66 2x6w_A Tail spike protein; vir 91.5 0.39 1.4E-05 50.0 7.8 21 226-247 233-254 (600)
67 2vbk_A Tailspike-protein; vira 84.2 5.8 0.0002 40.3 10.5 41 124-165 70-118 (514)
68 2x6w_A Tail spike protein; vir 82.7 6.1 0.00021 41.2 10.3 41 217-266 200-249 (600)
69 3eqn_A Glucan 1,3-beta-glucosi 76.7 26 0.0009 37.4 13.0 30 134-164 90-119 (758)
70 3t9g_A Pectate lyase; PL3, par 72.4 17 0.00058 32.7 8.7 49 212-261 84-132 (196)
71 1ee6_A Pectate lyase; parallel 64.5 24 0.00082 31.7 8.1 48 211-259 79-126 (197)
72 3t9g_A Pectate lyase; PL3, par 56.0 21 0.00071 32.1 6.1 67 175-259 114-180 (196)
73 1gq8_A Pectinesterase; hydrola 44.1 40 0.0014 32.0 6.5 17 174-191 117-133 (319)
74 1xg2_A Pectinesterase 1; prote 43.8 45 0.0015 31.7 6.8 17 174-191 113-129 (317)
75 2vbk_A Tailspike-protein; vira 41.2 1E+02 0.0034 31.4 8.9 23 216-238 210-233 (514)
76 1ee6_A Pectate lyase; parallel 38.5 76 0.0026 28.5 6.9 87 155-260 84-177 (197)
77 2x3h_A K5 lyase, K5A lyase; ba 25.8 2.1E+02 0.0071 27.9 8.0 100 155-255 142-256 (542)
No 1
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=100.00 E-value=1.3e-89 Score=673.94 Aligned_cols=282 Identities=52% Similarity=0.908 Sum_probs=269.7
Q ss_pred CCceeeecccCccccccccccccCCcCccCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHhhcCCCeEEEEecCeEEE
Q 018853 67 GNPIDDCWHCDPNWAANRQRLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIK 146 (349)
Q Consensus 67 ~np~d~~wr~~~~w~~~~~~la~~a~GfG~~ttGG~gG~v~~VT~~~d~~~~~p~pGtLr~av~~~~P~~IvF~~~g~I~ 146 (349)
+||||+||||+|+|+.+||+||+||+|||++||||+||++|+||+++| ++++|+|||||+||++++|+||+|+++|+|+
T Consensus 1 ~~~~~~c~~~~~~w~~~~~~~~~~a~Gfg~~ttGG~gG~v~~VT~~~d-~~~~~~~GsLr~av~~~~P~~Ivf~~~g~I~ 79 (346)
T 1pxz_A 1 DNPIDSCWRGDSNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDD-NPVNPTPGTLRYGATREKALWIIFSQNMNIK 79 (346)
T ss_dssp CCTTHHHHHSSCCTTTCGGGGGGCCCGGGTTCCTTTTSEEEEECCCCC-CTTSCCTTSHHHHHHCSSCEEEEESSCEEEC
T ss_pred CCccchhhccCcchhhhhhhcccCCccccCCCcCCCCccEEEECChHH-cccccCcchhHHHhccCCCeEEEEcCCcEEe
Confidence 699999999999999999999999999999999999999999999877 5799999999999999999999999999999
Q ss_pred ecceEEecCCceEEeeCceEEEEe-ccEEEEeeeccEEEEeeEEEeeccCCCccc-cCCCCccccCCCCCCCcEEeeCCc
Q 018853 147 LKHELIINSYKTIDGRGANVEITG-NGCLTLQYVSHVIIHNVHIHHCKPSGNTMI-ASSPTHVGYRGKSDGDGISIFGSQ 224 (349)
Q Consensus 147 L~~~L~i~snkTI~G~ga~i~I~G-~g~l~i~~a~NVIIrnL~I~~~~p~~~~~v-~~~~~~~G~r~~~dgDaIsi~gs~ 224 (349)
|+++|+|+|||||+|||++++|.| +.+|++++++|||||||+|+++.|.+++.| |+++.|+|.+...++|||+|++++
T Consensus 80 l~~~l~V~sn~TI~G~ga~~~i~G~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~ 159 (346)
T 1pxz_A 80 LKMPLYVAGHKTIDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVT 159 (346)
T ss_dssp CSSCEECCSSEEEECTTSCEEEETTSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCE
T ss_pred cCccEEecCCeEEEccCCceEEeCCcceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCc
Confidence 999999999999999999999998 336999999999999999999998888777 999999999888999999999999
Q ss_pred eEEEEeeEEecCCCCeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcCcccCCCeEE
Q 018853 225 KIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRGYIH 304 (349)
Q Consensus 225 nVWIDHcS~s~~~Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R~G~~H 304 (349)
|||||||+|+|+.||++|+++++++||||||+|++|+|+||+|++|++..|+.++||+|||+|+.++.+|+||+|+|++|
T Consensus 160 nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r~g~~h 239 (346)
T 1pxz_A 160 NAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVH 239 (346)
T ss_dssp EEEEESCEEECCSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEESSEEE
T ss_pred eEEEEeeEEecCCCCcEeeccCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEecceEE
Confidence 99999999999999999999999999999999999999999999998877777999999999965899999999999999
Q ss_pred EEcceEeCCcceEEecCCCceEEEEcceEeCCCCCCccccccccC
Q 018853 305 VVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAKEVYFQIF 349 (349)
Q Consensus 305 vvNN~~~~~~~yaigg~~~~~i~~egN~F~~~~~~~~k~vt~~~~ 349 (349)
++||||++|.+|++++++++++++|+|||+++++|..|+||||.+
T Consensus 240 v~NN~~~~~~~~~i~~~~~~~i~~egN~F~~~~~~~~k~v~~~~~ 284 (346)
T 1pxz_A 240 VANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIG 284 (346)
T ss_dssp EESCEECCCSSCSEEEESCCEEEEESCEEECCSCGGGCBSEEECS
T ss_pred EEeeEEEcccceEEeccCCceEEEECCEEECCCCCcccccEEEec
Confidence 999999999999999999999999999999999999999999864
No 2
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=100.00 E-value=2.2e-67 Score=514.68 Aligned_cols=231 Identities=31% Similarity=0.458 Sum_probs=206.7
Q ss_pred ccccc-CCcCccCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHhhcCCCeEEEEecCeEEEecceEEecCCceEEeeC
Q 018853 85 QRLAD-CSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIKLKHELIINSYKTIDGRG 163 (349)
Q Consensus 85 ~~la~-~a~GfG~~ttGG~gG~v~~VT~~~d~~~~~p~pGtLr~av~~~~P~~IvF~~~g~I~L~~~L~i~snkTI~G~g 163 (349)
.-.|. .|||||++||||+||++|+|||++| ||+||++++||||+|++.+.+.++++|.|.|||||+|||
T Consensus 7 ~G~As~~AeG~g~~ttGG~gG~v~~VTtl~d----------Lr~al~~~~PriIvv~G~I~~~~~~~l~v~snkTI~G~g 76 (340)
T 3zsc_A 7 VGFASVPTADLPEGTVGGLGGEIVFVRTAEE----------LEKYTTAEGKYVIVVDGTIVFEPKREIKVLSDKTIVGIN 76 (340)
T ss_dssp CSGGGCCCSSCTTSCCTTTTSEEEEECSHHH----------HHHHHTSSSCEEEEEEEEEEEEEEEEEEECSSEEEEEEE
T ss_pred ceeecccccccCCCCccCCCceEEEeCCHHH----------HHHHHhCCCCEEEEECcEEEeCCcceEEecCCCEEEecc
Confidence 33444 6899999999999999999999987 899999999999998654444444999999999999999
Q ss_pred ceEEEEeccEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeee
Q 018853 164 ANVEITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDA 243 (349)
Q Consensus 164 a~i~I~G~g~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~ 243 (349)
++ +|.|.| |+|++++|||||||+||++.+.+ .+. +...++|||+|++++|||||||+|+|+.||++|+
T Consensus 77 a~-~I~G~G-i~I~~a~NVIIrnl~i~~~~~~~------~~~----~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi 144 (340)
T 3zsc_A 77 DA-KIVGGG-LVIKDAQNVIIRNIHFEGFYMED------DPR----GKKYDFDYINVENSHHIWIDHITFVNGNDGAVDI 144 (340)
T ss_dssp EE-EEEEEE-EEEESCEEEEEESCEEECCCCTT------CTT----SCSSCCCSEEEESCEEEEEESCEEESCSSCSEEE
T ss_pred Cc-EEecCc-eEEEcCceEEEeCeEEECCcccc------Ccc----CCcCCCCeEEEecCCcEEEEeeeeccCCccceEE
Confidence 99 999988 99999999999999999876421 110 1245899999999999999999999999999999
Q ss_pred eeCCceEEEEcceeccCCceeeccCCCCc--cCCCC-ceEEEEeeEecCCCcCcCcccCCCeEEEEcceEeC--------
Q 018853 244 IMGSTGITISNNYFSHHNEVMLLGHNDKY--ALDMG-MQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTS-------- 312 (349)
Q Consensus 244 ~~gs~~ITISnn~f~~h~k~~L~G~sd~~--~~d~g-~~VTi~hN~F~~n~~~R~Pr~R~G~~HvvNN~~~~-------- 312 (349)
.+++++||||||+|++|+|+||+|++|++ ..|++ ++||||||||. ++.+||||+|+|++|++||||++
T Consensus 145 ~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~-~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~ 223 (340)
T 3zsc_A 145 KKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFK-NLIQRMPRIRFGMAHVFNNFYSMGLRTGVSG 223 (340)
T ss_dssp ETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEE-SCCBCTTEEESSEEEEESCEEECCCCCSCSS
T ss_pred ecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEec-CCCCCCCcccCCeEEEEccEEECCccccccc
Confidence 99999999999999999999999999876 35554 89999999995 79999999999999999999999
Q ss_pred --CcceEEecCCCceEEEEcceEeCCCC
Q 018853 313 --WEMYAIGGSANPTINSQGNRYTAPPD 338 (349)
Q Consensus 313 --~~~yaigg~~~~~i~~egN~F~~~~~ 338 (349)
|.+||+++++++++++|+|||+++++
T Consensus 224 ~~~~~yai~~~~~a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 224 NVFPIYGVASAMGAKVHVEGNYFMGYGA 251 (340)
T ss_dssp CCSCCEEEEEETTCEEEEESCEEECSCH
T ss_pred cceeeeeEecCCCCEEEEECcEEECCCc
Confidence 99999999999999999999999987
No 3
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=100.00 E-value=4.9e-64 Score=489.66 Aligned_cols=219 Identities=25% Similarity=0.333 Sum_probs=200.9
Q ss_pred CCcCccCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHhhc---CCCeEEEEecCeEEEecc---------------eE
Q 018853 90 CSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQ---TEPIWITFASNMLIKLKH---------------EL 151 (349)
Q Consensus 90 ~a~GfG~~ttGG~gG~v~~VT~~~d~~~~~p~pGtLr~av~~---~~P~~IvF~~~g~I~L~~---------------~L 151 (349)
+|+|||++||||+||++|+|||++| ||+||++ ++||||+| +|+|+++. +|
T Consensus 1 ga~Gfa~~ttGG~gg~~~~Vtt~~~----------L~~al~~~~~~~p~iI~~--~G~i~~~~~~~~c~~~~~~~~~~~l 68 (330)
T 2qy1_A 1 GPVGYGAGTTGGGNKVPVNVATFEA----------MQSAIDSYSGSGGLVLNY--TGKFDFGTIKDVCAQWKLPAKTVQI 68 (330)
T ss_dssp CCCSTTTTCCTTTTSCCEEECSHHH----------HHHHHHHSCSSSCEEEEE--CCBCCGGGCCCGGGSTTSCCCEEEE
T ss_pred CCceeecCCCCCCCceEEEcCCHHH----------HHHHHhccCCCCCEEEEE--ccEEecccccccccccccccceeEE
Confidence 5899999999999999999999874 8999985 89999999 57898875 78
Q ss_pred EecCCceEEeeCceEEEEeccEEEEe-eeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeC-----Cce
Q 018853 152 IINSYKTIDGRGANVEITGNGCLTLQ-YVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG-----SQK 225 (349)
Q Consensus 152 ~i~snkTI~G~ga~i~I~G~g~l~i~-~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~g-----s~n 225 (349)
.+.|||||+|+++ +|+|.+ |+|+ +++|||||||+|+++.+ .+++|+|+|++ ++|
T Consensus 69 ~v~sn~TI~G~~a--~i~g~g-l~i~~~~~NVIIrnl~i~~~~~-----------------~~~~DaI~i~g~~~~~s~n 128 (330)
T 2qy1_A 69 KNKSDVTIKGANG--SAANFG-IRVVGNAHNVIIQNMTIGLLQG-----------------GEDADSISLEGNSSGEPSK 128 (330)
T ss_dssp ESCCSEEEEECTT--CBBSSE-EEEESSCEEEEEESCEEESCSS-----------------GGGCCSEEEECBTTBCCEE
T ss_pred EcCCCeEEECCCc--EEeeee-EEEeCCCCeEEEeCeEEeCCCC-----------------CCCCcceeeccccCccccc
Confidence 8899999999876 578877 9998 89999999999998643 14789999995 999
Q ss_pred EEEEeeEEecCC-----------CCeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCc
Q 018853 226 IWVDHCSLSYCT-----------DGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQR 294 (349)
Q Consensus 226 VWIDHcS~s~~~-----------Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R 294 (349)
||||||+|+|.. ||++|+++++++||||||+|++|+|+||+|++|++..+++++||||||||. ++.+|
T Consensus 129 VWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~-~~~~R 207 (330)
T 2qy1_A 129 IWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFE-NVESR 207 (330)
T ss_dssp EEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEE-EEEEC
T ss_pred EEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEEc-CCCCC
Confidence 999999999876 999999999999999999999999999999999988777799999999995 79999
Q ss_pred CcccCCCeEEEEcceEeCCcceEEecCCCceEEEEcceEeCCCCCCc
Q 018853 295 MPRCRRGYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNA 341 (349)
Q Consensus 295 ~Pr~R~G~~HvvNN~~~~~~~yaigg~~~~~i~~egN~F~~~~~~~~ 341 (349)
+||+|+|++|++||||++|.+|++++++++++++|+|||+++++|+.
T Consensus 208 ~Pr~r~G~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 208 VPLQRFGLSHIYNNYFNNVTTSGINVRMGGIAKIESNYFENIKNPVT 254 (330)
T ss_dssp TTEEESSEEEEESCEEEEECSCSEEEETTCEEEEESCEEEEEESSEE
T ss_pred CCceecceEEEEeeEEEcccceEeccCCCcEEEEEccEEECCCCcee
Confidence 99999999999999999999999999999999999999999987754
No 4
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=100.00 E-value=5.1e-63 Score=481.74 Aligned_cols=215 Identities=30% Similarity=0.472 Sum_probs=199.6
Q ss_pred cCCcCccC---CCCCCCCCceEEEcCCCCCCCCCCCChhHHHHhh-------cCCCeEEEEecCeEEEec----ceEEec
Q 018853 89 DCSVGFAQ---GTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVI-------QTEPIWITFASNMLIKLK----HELIIN 154 (349)
Q Consensus 89 ~~a~GfG~---~ttGG~gG~v~~VT~~~d~~~~~p~pGtLr~av~-------~~~P~~IvF~~~g~I~L~----~~L~i~ 154 (349)
++|+|||+ +||||+||++|+||+++| ||+||+ +++||+|+ ++|+|+|+ ++|.|+
T Consensus 2 ~~~~Gfa~~nggTtGG~gG~vv~Vttl~d----------L~~Al~~~~~~~~~~~p~iI~--V~G~I~l~~~~~~~i~v~ 69 (326)
T 3vmv_A 2 NGPQGYASMNGGTTGGAGGRVEYASTGAQ----------IQQLIDNRSRSNNPDEPLTIY--VNGTITQGNSPQSLIDVK 69 (326)
T ss_dssp -CCSGGGGSTTCCCTTTTSEEEEESSHHH----------HHHHHHHHHHSSCTTSCEEEE--ECSEEESTTCSSSSEEES
T ss_pred CCCceeeecCCCCccCCCCeEEEECCHHH----------HHHHHhhcccccCCCCCEEEE--EeeEEecCCCCCceEEEe
Confidence 57999999 699999999999999987 899999 89999998 67899999 889998
Q ss_pred ---------CCceEEeeCceEEEEeccEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeC-Cc
Q 018853 155 ---------SYKTIDGRGANVEITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG-SQ 224 (349)
Q Consensus 155 ---------snkTI~G~ga~i~I~G~g~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~g-s~ 224 (349)
|||||+|+|++++|.|.+ |+|++++|||||||+|+++. .+++|+|+|++ ++
T Consensus 70 ~~~~~~~~~sn~TI~G~g~~~~i~G~g-l~i~~a~NVIIrNl~i~~~~------------------~~~~DaI~i~~~s~ 130 (326)
T 3vmv_A 70 NHRGKAHEIKNISIIGVGTNGEFDGIG-IRLSNAHNIIIQNVSIHHVR------------------EGEGTAIEVTDDSK 130 (326)
T ss_dssp CTTCTTSCEEEEEEEECTTCCEEESCC-EEEESEEEEEEESCEEECCC------------------STTSCSEEEETTCE
T ss_pred cccccccCCCCeEEEecCCCeEEeCcE-EEEEecceEEEECeEEEcCC------------------CCCCCeEEEecCCC
Confidence 999999999999999998 99999999999999999763 24789999997 99
Q ss_pred eEEEEeeEEecCC---------CCeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcC
Q 018853 225 KIWVDHCSLSYCT---------DGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRM 295 (349)
Q Consensus 225 nVWIDHcS~s~~~---------Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~ 295 (349)
|||||||+|+|+. ||++|+++++++||||||+|++|+|+||+|++|++.. .+.+||||||||. ++.+|+
T Consensus 131 nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~-~~~~vT~~~N~f~-~~~~R~ 208 (326)
T 3vmv_A 131 NVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKTMLVGHTDNASL-APDKITYHHNYFN-NLNSRV 208 (326)
T ss_dssp EEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEECEEECSSSCGGG-CCEEEEEESCEEE-EEEECT
T ss_pred cEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceEEEECCCCCCcc-cCccEEEEeeEec-CCcCcC
Confidence 9999999999854 9999999999999999999999999999999987653 2369999999995 799999
Q ss_pred cccCCCeEEEEcceEeCCcceEEecCCCceEEEEcceEeCC
Q 018853 296 PRCRRGYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAP 336 (349)
Q Consensus 296 Pr~R~G~~HvvNN~~~~~~~yaigg~~~~~i~~egN~F~~~ 336 (349)
||+|+|++|++||||++|.+|++++++++++++|+|||+++
T Consensus 209 Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 209 PLIRYADVHMFNNYFKDINDTAINSRVGARVFVENNYFDNV 249 (326)
T ss_dssp TEEESCEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEE
T ss_pred CcccCCcEEEEccEEECCCceEEeecCCcEEEEEceEEECC
Confidence 99999999999999999999999999999999999999998
No 5
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=100.00 E-value=1.5e-61 Score=476.29 Aligned_cols=236 Identities=31% Similarity=0.452 Sum_probs=205.6
Q ss_pred ccccCCcCccC---CCCCCCCCc-eEEEcCCCCCCCCCCCChhHHHHh--hcCCCeEEEEecCeEEEecc----------
Q 018853 86 RLADCSVGFAQ---GTLGGKGGQ-IYVVTDSSDSDPANPTPGTLRHAV--IQTEPIWITFASNMLIKLKH---------- 149 (349)
Q Consensus 86 ~la~~a~GfG~---~ttGG~gG~-v~~VT~~~d~~~~~p~pGtLr~av--~~~~P~~IvF~~~g~I~L~~---------- 149 (349)
.+..+++|||+ +||||++|+ +|+||+++| ||+|| .+++||+|+ ++|+|++..
T Consensus 3 ~~~~~~~G~a~~~~gtTGG~~g~~v~~Vtt~~~----------L~~al~~~~~~p~VI~--V~GtI~~~~~~~~~s~~~~ 70 (355)
T 1pcl_A 3 ETDAATTGWATQNGGTTGGAKAAKAVEVKNISD----------FKKALNGTDSSAKIIK--VTGPIDISGGKAYTSFDDQ 70 (355)
T ss_pred ccccCCcceeecCCCCccCCCCceEEEeCCHHH----------HHHHHhhCCCCcEEEE--ECCEEecCCcccccccccc
Confidence 34458999998 799999998 799999987 79999 788999665 578999874
Q ss_pred ----eEEecCCceEEeeCceEEEEeccEEEEeeeccEEEEeeEEEeec---cCCCccccCCCCccccCCCCCCCcEEeeC
Q 018853 150 ----ELIINSYKTIDGRGANVEITGNGCLTLQYVSHVIIHNVHIHHCK---PSGNTMIASSPTHVGYRGKSDGDGISIFG 222 (349)
Q Consensus 150 ----~L~i~snkTI~G~ga~i~I~G~g~l~i~~a~NVIIrnL~I~~~~---p~~~~~v~~~~~~~G~r~~~dgDaIsi~g 222 (349)
+|.|.|||||+|+|++++|+|++ |+|++++|||||||+|++.. |.++ | ..|| .+++|+|+|++
T Consensus 71 ~~~~~l~v~sn~TI~G~G~~~~i~g~g-l~i~~~~NVIIrnl~i~~~~~~~p~~~------~-~~g~--~~~~DaI~i~~ 140 (355)
T 1pcl_A 71 KARSQISIPSNTTIIGVGSNGKFTNGS-LVIKGVKNVILRNLYIETPVDVAPHYE------S-GDGW--NAEWDAAVIDN 140 (355)
T ss_pred ccceeEEeCCCeEEEEecCCeEEecCE-EEEecCCeEEEeeeEEEcCcccccccc------c-ccCc--cccCceEEecC
Confidence 78899999999999999999987 99999999999999999742 2111 1 1234 25789999999
Q ss_pred CceEEEEeeEEecC-----------------CCCeeeeeeCCceEEEEcceeccCCceeeccCCCCcc-CCCC-ceEEEE
Q 018853 223 SQKIWVDHCSLSYC-----------------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYA-LDMG-MQVTIA 283 (349)
Q Consensus 223 s~nVWIDHcS~s~~-----------------~Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~-~d~g-~~VTi~ 283 (349)
++|||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|++. .|++ ++||||
T Consensus 141 s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~h 220 (355)
T 1pcl_A 141 STNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFH 220 (355)
T ss_pred CCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEE
Confidence 99999999999997 6999999999999999999999999999999999876 6776 899999
Q ss_pred eeEecCCCcCcCcccCCCeEEEEcceEeC---Cc----ceEEecCCCceEEEEcceEeCCCCCCccccccc
Q 018853 284 FNHFGVALVQRMPRCRRGYIHVVNNDFTS---WE----MYAIGGSANPTINSQGNRYTAPPDDNAKEVYFQ 347 (349)
Q Consensus 284 hN~F~~n~~~R~Pr~R~G~~HvvNN~~~~---~~----~yaigg~~~~~i~~egN~F~~~~~~~~k~vt~~ 347 (349)
||||. ++.+|+||+|+|++|++||||++ |+ +|++++++++++++|+|||++++ .|+++++
T Consensus 221 hN~f~-~~~~R~PrvR~G~~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~~---~~~~~~~ 287 (355)
T 1pcl_A 221 NNVFD-RVTERAPRVRFGSIHAYNNVYLGDVKHSVYPYLYSFGLGTSGSILSESNSFTLSN---LKSIDGK 287 (355)
T ss_pred CcEEe-CCcccCCceecceEEEEcceEEcccCCCccccceEecCCCCcEEEEEccEEECCC---ccccccc
Confidence 99995 79999999999999999999974 55 79999999999999999999982 2566555
No 6
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=100.00 E-value=7.5e-62 Score=486.85 Aligned_cols=244 Identities=32% Similarity=0.443 Sum_probs=210.9
Q ss_pred ccccccCCcCccC---CCCCCCCCc---eEEEcCCCCCCCCCCCChhHHHHhhcC--------CCeEEEEecCeEEEecc
Q 018853 84 RQRLADCSVGFAQ---GTLGGKGGQ---IYVVTDSSDSDPANPTPGTLRHAVIQT--------EPIWITFASNMLIKLKH 149 (349)
Q Consensus 84 ~~~la~~a~GfG~---~ttGG~gG~---v~~VT~~~d~~~~~p~pGtLr~av~~~--------~P~~IvF~~~g~I~L~~ 149 (349)
||.|+ .|+|||+ +||||++|+ ||+||+++| |++||.+. +||+|++ +|+|++..
T Consensus 5 ~~~~~-~~~GfA~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~~~~~~priI~V--~GtId~~~ 71 (416)
T 1vbl_A 5 HEVLK-PYDGWAAYGEGTTGGAMASPQNVFVVTNRTE----------LIQALGGNNHTNQYNSVPKIIYV--KGTIDLNV 71 (416)
T ss_dssp GCCCC-TTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHTTSCTTGGGGCCSCEEEEE--CSEEESSB
T ss_pred ccccC-CCcceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhccccccccCCCCEEEEE--CCEEeccc
Confidence 56665 8999999 999999995 899999987 79999864 9999995 67999751
Q ss_pred -------------------------------------------------------eEEecCCceEEeeCceEEEEeccEE
Q 018853 150 -------------------------------------------------------ELIINSYKTIDGRGANVEITGNGCL 174 (349)
Q Consensus 150 -------------------------------------------------------~L~i~snkTI~G~ga~i~I~G~g~l 174 (349)
+|.|.|||||+|+|++++|+|++ |
T Consensus 72 ~~~g~~~~c~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~g-l 150 (416)
T 1vbl_A 72 DDNNQPVGPDFYKDPHFDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMVYVGSNTSIIGVGKDAKIKGGG-F 150 (416)
T ss_dssp CTTSCBCCHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEECTTCCEEESCE-E
T ss_pred CCCCccccccccccCCcchhhhhhhhCccccccccCCCCcccccccccccccceeEEEeCCCeeEEecCCCeEEecCE-E
Confidence 67889999999999999999987 9
Q ss_pred EEeeeccEEEEeeEEEeec---cCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecC---------------
Q 018853 175 TLQYVSHVIIHNVHIHHCK---PSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC--------------- 236 (349)
Q Consensus 175 ~i~~a~NVIIrnL~I~~~~---p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~--------------- 236 (349)
+|++++|||||||+|++.. |.++. .+.....| .+++|+|+|++++|||||||+|+|+
T Consensus 151 ~i~~~~NVIIrNl~i~~~~~~~p~~~p---~~~~~~~~--~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~ 225 (416)
T 1vbl_A 151 LIKNVDNVIIRNIEFEAPLDYFPEWDP---TDGTLGEW--NSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPF 225 (416)
T ss_dssp EEESCEEEEEESCEEECCCCSSCEEET---TSTTTCEE--ECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEEC
T ss_pred EeecCceEEEeCeEEEcCccccccccc---cccccccc--cCCCceEEecCCceEEEEccEEecCCCcccccccccCcce
Confidence 9999999999999999753 21100 00000112 3578999999999999999999997
Q ss_pred --CCCeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCC-ceEEEEeeEecCCCcCcCcccCCCeEEEEcceEeCC
Q 018853 237 --TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTSW 313 (349)
Q Consensus 237 --~Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~~n~~~R~Pr~R~G~~HvvNN~~~~~ 313 (349)
.||++|+++++++||||||+|++|+|+||+|++|++..|++ |+||||||||. ++.+||||+|+|++|+|||||+++
T Consensus 226 ~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~-~~~~R~Pr~R~G~~Hv~NN~~~n~ 304 (416)
T 1vbl_A 226 QQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYK-NVTQRLPRVRFGQVHIYNNYYEFS 304 (416)
T ss_dssp CCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEE-EEEECSSEESSCEEEEESCEEEEC
T ss_pred eecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEec-CCccCCcccccceEEEEcceEECC
Confidence 59999999999999999999999999999999999888887 99999999995 799999999999999999999864
Q ss_pred ------cceEEecCCCceEEEEcceEeCCCCCCccccccc
Q 018853 314 ------EMYAIGGSANPTINSQGNRYTAPPDDNAKEVYFQ 347 (349)
Q Consensus 314 ------~~yaigg~~~~~i~~egN~F~~~~~~~~k~vt~~ 347 (349)
.+|+++++++++|++|+|||+++++...++++++
T Consensus 305 ~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~~~~~~~~~ 344 (416)
T 1vbl_A 305 NLADYDFQYAWGVGVFSQIYAQNNYFSFDWDIDPSLIIKV 344 (416)
T ss_dssp TTSSSCCCCSEEEETTCEEEEESCEEEESSCCCGGGSEEE
T ss_pred CCCcccceeEeccCCCcEEEEECCEEECCCCCCccceeee
Confidence 3599999999999999999999988777777765
No 7
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=100.00 E-value=6.1e-62 Score=479.92 Aligned_cols=227 Identities=31% Similarity=0.494 Sum_probs=201.4
Q ss_pred CCcCccC---CCCCCCCC---ceEEEcCCCCCCCCCCCChhHHHHh-hcCCCeEEEEecCeEEEecc-------------
Q 018853 90 CSVGFAQ---GTLGGKGG---QIYVVTDSSDSDPANPTPGTLRHAV-IQTEPIWITFASNMLIKLKH------------- 149 (349)
Q Consensus 90 ~a~GfG~---~ttGG~gG---~v~~VT~~~d~~~~~p~pGtLr~av-~~~~P~~IvF~~~g~I~L~~------------- 149 (349)
+++|||+ +||||++| +||+||+++| ||+|| .+++||+|++ +|+|+++.
T Consensus 13 ~~~Gfa~~~~gtTGG~~g~~~~v~~Vtt~~d----------L~~al~~~~~p~vI~V--~GtI~~~~~~~~~s~~~~~~~ 80 (361)
T 1pe9_A 13 PTVGWASQNGFTTGGAAATSDNIYIVTNISE----------FTSALSAGAEAKIIQI--KGTIDISGGTPYTDFADQKAR 80 (361)
T ss_dssp CSSSGGGSSSCCCTTTTCCGGGEEEECSHHH----------HHHHHTTTTSCEEEEE--CSEEETTTTCCCCSHHHHHHH
T ss_pred CCCceeecCCCCcCCCCCccccEEEeCCHHH----------HHHHHhcCCCcEEEEE--CCEEecCCccccccccccccc
Confidence 5899994 99999998 7999999987 89999 8999998875 67999974
Q ss_pred -eEEecCCceEEeeCceEEEEeccEEEE---eeeccEEEEeeEEEeec---cCCCccccCCCCccccCCCCCCCcEEeeC
Q 018853 150 -ELIINSYKTIDGRGANVEITGNGCLTL---QYVSHVIIHNVHIHHCK---PSGNTMIASSPTHVGYRGKSDGDGISIFG 222 (349)
Q Consensus 150 -~L~i~snkTI~G~ga~i~I~G~g~l~i---~~a~NVIIrnL~I~~~~---p~~~~~v~~~~~~~G~r~~~dgDaIsi~g 222 (349)
+|.|.|||||+|+|++++|+|.+ |+| ++++|||||||+|++.. |.++ | ..||+ +++|+|+|++
T Consensus 81 ~~l~v~snkTI~G~G~~~~i~g~g-l~i~~~~~~~NVIIrNl~i~~~~d~~p~~~------~-~~g~~--~~~DaI~i~~ 150 (361)
T 1pe9_A 81 SQINIPANTTVIGLGTDAKFINGS-LIIDGTDGTNNVIIRNVYIQTPIDVEPHYE------K-GDGWN--AEWDAMNITN 150 (361)
T ss_dssp SEEECCSSEEEEECTTCCEEESSE-EEEEGGGTCEEEEEESCEEECCCCSSCEEE------T-TTEEE--CCCCSEEEET
T ss_pred eeEEecCCcEEEccCCCeEEecCE-EEEecCCCCceEEEeCeEEEcCcccccccc------c-ccCcc--cCCceEEeec
Confidence 78999999999999999999987 999 79999999999999753 2100 0 12342 5799999999
Q ss_pred -CceEEEEeeEEecC-----------------CCCeeeeeeCCceEEEEcceeccCCceeeccCCCCcc-CCCC-ceEEE
Q 018853 223 -SQKIWVDHCSLSYC-----------------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYA-LDMG-MQVTI 282 (349)
Q Consensus 223 -s~nVWIDHcS~s~~-----------------~Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~-~d~g-~~VTi 282 (349)
++|||||||+|+|+ .||++|+++++++||||||+|++|+|+||+|++|++. .|++ |+|||
T Consensus 151 ~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~ 230 (361)
T 1pe9_A 151 GAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTL 230 (361)
T ss_dssp TCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEE
T ss_pred CCceEEEEccEeecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEE
Confidence 99999999999997 6999999999999999999999999999999999876 6766 99999
Q ss_pred EeeEecCCCcCcCcccCCCeEEEEcceEe---CCc----ceEEecCCCceEEEEcceEeCCCCC
Q 018853 283 AFNHFGVALVQRMPRCRRGYIHVVNNDFT---SWE----MYAIGGSANPTINSQGNRYTAPPDD 339 (349)
Q Consensus 283 ~hN~F~~n~~~R~Pr~R~G~~HvvNN~~~---~~~----~yaigg~~~~~i~~egN~F~~~~~~ 339 (349)
|||||. ++.+||||+|+|++|+|||||+ +|+ +|+++++++++|++|+|||++++.+
T Consensus 231 hhN~f~-~~~~R~Pr~R~G~~Hv~NN~~~~~~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~ 293 (361)
T 1pe9_A 231 FNNVFN-RVTERAPRVRYGSIHSFNNVFKGDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIANLS 293 (361)
T ss_dssp ESCEEE-EEEECSSEESSCEEEEESCEEEEETTCSSSCCCCSEEECTTCEEEEESCEEEEETCC
T ss_pred ECeEEc-CccccCcccccceEEEEcceEecccCCCccccceEecCCCCcEEEEECCEEECCCCc
Confidence 999995 7999999999999999999996 455 7999999999999999999998543
No 8
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=100.00 E-value=3.3e-61 Score=480.09 Aligned_cols=243 Identities=30% Similarity=0.493 Sum_probs=208.5
Q ss_pred cccccccCCcCccC---CCCCCCCCc---eEEEcCCCCCCCCCCCChhHHHHh---hcCCCeEEEEecCeEEEec-----
Q 018853 83 NRQRLADCSVGFAQ---GTLGGKGGQ---IYVVTDSSDSDPANPTPGTLRHAV---IQTEPIWITFASNMLIKLK----- 148 (349)
Q Consensus 83 ~~~~la~~a~GfG~---~ttGG~gG~---v~~VT~~~d~~~~~p~pGtLr~av---~~~~P~~IvF~~~g~I~L~----- 148 (349)
.||.|+ .|+|||+ +||||++|+ ||+||+++| |++|| .+++||+|++ +|+|++.
T Consensus 4 ~~~~~~-~a~Gfa~~~~gTTGG~~a~~~~v~tVtt~ae----------L~~al~~~~~~~priI~v--~GtId~~~~~~g 70 (399)
T 2o04_A 4 GHQTLG-SNDGWGAYSTGTTGGSKASSSNVYTVSNRNQ----------LVSALGKETNTTPKIIYI--KGTIDMNVDDNL 70 (399)
T ss_dssp TTCCCC-TTSSGGGSTTCCCTTTTCCGGGEEEECSHHH----------HHHHHCCTTCCSCEEEEE--CSEEESSBCTTC
T ss_pred cccccC-CCcceeecCCCCcCCCCCccceEEEeCCHHH----------HHHHHHhccCCCCEEEEE--cCEEecccCCcc
Confidence 356565 8999999 999999996 899999986 79999 8899999996 6799974
Q ss_pred --------------------------------------------------ceEEecCCceEEeeCceEEEEeccEEEEee
Q 018853 149 --------------------------------------------------HELIINSYKTIDGRGANVEITGNGCLTLQY 178 (349)
Q Consensus 149 --------------------------------------------------~~L~i~snkTI~G~ga~i~I~G~g~l~i~~ 178 (349)
.+|.|.|||||+|+|++++|+|.+ |+|+.
T Consensus 71 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~g-l~i~~ 149 (399)
T 2o04_A 71 KPLGLNDYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGN-FQIKS 149 (399)
T ss_dssp CBCCHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEESSSCCEEESCE-EEECS
T ss_pred ccccccccccCCcchhhhhhcccccccccccCCCcccccccccccccccceEEEeCCCceEEeccCCeEEeeCE-EEeeC
Confidence 167889999999999999999987 99988
Q ss_pred eccEEEEeeEEEeec---cCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecC-----------------CC
Q 018853 179 VSHVIIHNVHIHHCK---PSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC-----------------TD 238 (349)
Q Consensus 179 a~NVIIrnL~I~~~~---p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~-----------------~D 238 (349)
+|||||||+|++.. |.++. .......| ..++|+|+|++++|||||||+|+|+ .|
T Consensus 150 -~NVIIrnl~i~~~~~~~p~~~p---~~~~~~~~--~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~D 223 (399)
T 2o04_A 150 -DNVIIRNIEFQDAYDYFPQWDP---TDGSSGNW--NSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHD 223 (399)
T ss_dssp -EEEEEESCEEECCCCSSCEEET---TSSTTCEE--ECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCC
T ss_pred -CCEEEeCeEEecCccccccccc---cccccccc--cCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccc
Confidence 99999999998752 21100 00000111 3578999999999999999999997 59
Q ss_pred CeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCC-ceEEEEeeEecCCCcCcCcccCCCeEEEEcceEeCCc---
Q 018853 239 GLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFGVALVQRMPRCRRGYIHVVNNDFTSWE--- 314 (349)
Q Consensus 239 glid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~~n~~~R~Pr~R~G~~HvvNN~~~~~~--- 314 (349)
|++|+++++++||||||+|++|+|+||+|++|++..|++ ++||||||||. ++.+||||+|+|++|+|||||++|.
T Consensus 224 gl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~-~~~~R~Pr~R~G~~Hv~NN~~~n~~~~~ 302 (399)
T 2o04_A 224 GQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYK-NIVQAAPRVRFGQVHVYNNYYEGSTSSS 302 (399)
T ss_dssp CSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEE-EEEECTTEESSCEEEEESCEEECCTTCS
T ss_pred cceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEec-CCcccCCCcccceEEEEcceEECCCCCC
Confidence 999999999999999999999999999999999988887 89999999995 7999999999999999999999873
Q ss_pred ----ceEEecCCCceEEEEcceEeCCCCCCccccccc
Q 018853 315 ----MYAIGGSANPTINSQGNRYTAPPDDNAKEVYFQ 347 (349)
Q Consensus 315 ----~yaigg~~~~~i~~egN~F~~~~~~~~k~vt~~ 347 (349)
+|+++++++++|++|+|||+++.. ..|+++++
T Consensus 303 ~~~~~ya~g~~~~~~i~~e~N~F~~~~~-~~~~~~~~ 338 (399)
T 2o04_A 303 SYPFSYAWGIGKSSKIYAQNNVIDVPGL-SAAKTISV 338 (399)
T ss_dssp SSCCCCSEEECTTCEEEEESCEEECTTC-CSGGGEEE
T ss_pred ccceeeEeccCCCcEEEEEceEEECCCC-Cccceeee
Confidence 499999999999999999999843 45667765
No 9
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=100.00 E-value=2e-59 Score=461.77 Aligned_cols=218 Identities=21% Similarity=0.295 Sum_probs=199.2
Q ss_pred ccccCCcCccCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHhhcCCCeEEEEecCeEEEec-----------------
Q 018853 86 RLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIKLK----------------- 148 (349)
Q Consensus 86 ~la~~a~GfG~~ttGG~gG~v~~VT~~~d~~~~~p~pGtLr~av~~~~P~~IvF~~~g~I~L~----------------- 148 (349)
.++++|+|||++||||++|++|+||+++| ||+||++++||||+| +|+|+++
T Consensus 2 ~~~~~a~Gfa~~tTGG~~g~~~~Vtt~~d----------L~~al~~~~prvIvv--~gti~~~~~~G~~t~~~c~~~~~~ 69 (359)
T 1idk_A 2 GVSGSAEGFAKGVTGGGSATPVYPDTIDE----------LVSYLGDDEARVIVL--TKTFDFTDSEGTTTGTGCAPWGTA 69 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSS
T ss_pred CCCCCCccccCCCCCCCCceEEecCCHHH----------HHHHHcCCCceEEEE--CCEEEeccccCccccccccccccc
Confidence 57889999999999999999999999976 899999999999999 5688863
Q ss_pred --------------------------------ceEEecCCceEEeeCceEEEEeccEEEEe-eeccEEEEeeEEEeeccC
Q 018853 149 --------------------------------HELIINSYKTIDGRGANVEITGNGCLTLQ-YVSHVIIHNVHIHHCKPS 195 (349)
Q Consensus 149 --------------------------------~~L~i~snkTI~G~ga~i~I~G~g~l~i~-~a~NVIIrnL~I~~~~p~ 195 (349)
.+|.|.|||||+|+|++++|+|.+ |+|+ +++|||||||+||++.|.
T Consensus 70 ~~~~~~~~~~~w~~~~~~~~~~~~~t~~~~~~~~l~v~snkTI~G~G~~~~i~G~g-l~i~~~a~NVIIrnL~i~~~~~~ 148 (359)
T 1idk_A 70 SACQVAIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKG-LRIVSGAENIIIQNIAVTDINPK 148 (359)
T ss_dssp TTBCEEECGGGHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCC-EEECTTCEEEEEESCEEEEECTT
T ss_pred cccccccccccccccccccCccccccccccccceEEeCCCceEEEecCCeEEecce-EEEecCCCcEEEeCeEEEccccc
Confidence 468999999999999999999998 9998 899999999999997642
Q ss_pred CCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeee-eeCCceEEEEcceecc------------CCc
Q 018853 196 GNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDA-IMGSTGITISNNYFSH------------HNE 262 (349)
Q Consensus 196 ~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~-~~gs~~ITISnn~f~~------------h~k 262 (349)
+ .+++|+|+|++++|||||||+|+|+.||+++. ++++++||||||+|++ |++
T Consensus 149 -----------~----~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~~~G~h~~~ 213 (359)
T 1idk_A 149 -----------Y----VWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSATCDGYHYWA 213 (359)
T ss_dssp -----------E----ETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTTSSSBBSCC
T ss_pred -----------c----cccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccccCccccce
Confidence 2 24789999999999999999999999999986 6789999999999973 458
Q ss_pred eeeccCCCCccCCCCceEEEEeeEecCCCcCcCcccCCC-eEEEEcceEeCCcceEEecCCCceEEEEcceEeCCCCCC
Q 018853 263 VMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRG-YIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDN 340 (349)
Q Consensus 263 ~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R~G-~~HvvNN~~~~~~~yaigg~~~~~i~~egN~F~~~~~~~ 340 (349)
+||+|++| +||||||+|. ++.+|+||+|+| ++|++||||++|.+|++++++++++++|+|||+++++|.
T Consensus 214 ~~L~G~sd--------~vT~hhN~f~-~~~~R~Pr~r~g~~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~~p~ 283 (359)
T 1idk_A 214 IYLDGDAD--------LVTMKGNYIY-HTSGRSPKVQDNTLLHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNVDTVL 283 (359)
T ss_dssp EEECCSSC--------EEEEESCEEE-SBCSCTTEECTTCEEEEESCEEEEEEEEEEEECTTCEEEEESCEEEEEEEEE
T ss_pred EEEEecCC--------CeEEEceEee-cCcccCccccCCceEEEECCEEecccceEEeccCCcEEEEEccEEECCCCce
Confidence 99999875 8999999997 799999999999 699999999999999999999999999999999987764
No 10
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=100.00 E-value=1.6e-57 Score=448.32 Aligned_cols=219 Identities=27% Similarity=0.384 Sum_probs=195.4
Q ss_pred ccccCCcCccCCCCCCCCCceEEEcCCCCCCCCCCCChhHHHHhhcCCCeEEEEecCeEEEec-----------------
Q 018853 86 RLADCSVGFAQGTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQTEPIWITFASNMLIKLK----------------- 148 (349)
Q Consensus 86 ~la~~a~GfG~~ttGG~gG~v~~VT~~~d~~~~~p~pGtLr~av~~~~P~~IvF~~~g~I~L~----------------- 148 (349)
.++++|+|||++||||++|++|+||+++| ||+||++++||+|+| +|+|++.
T Consensus 2 ~~~~~a~Gfa~~tTGG~gg~~v~Vtt~~~----------L~~al~~~~prvIvv--~gtid~~g~~g~~~~~~c~~~~~~ 69 (359)
T 1qcx_A 2 GVVGAAEGFAHGVTGGGSASPVYPTTTDE----------LVSYLGDNEPRVIIL--DQTFDFTGTEGTETTTGCAPWGTA 69 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH----------HHHHHHSSSCEEEEE--CSEEECTTTTCEEEEEEECTTCSS
T ss_pred CcCCCcceeecCCcCCCCcceEEeCCHHH----------HHHHHcCCCCeEEEE--CcEEeecccccccccccccccccc
Confidence 35678999999999999999999999987 899999999999995 3445431
Q ss_pred --------------------------------ceEEecCCceEEeeCceEEEEeccEEEEe-eeccEEEEeeEEEeeccC
Q 018853 149 --------------------------------HELIINSYKTIDGRGANVEITGNGCLTLQ-YVSHVIIHNVHIHHCKPS 195 (349)
Q Consensus 149 --------------------------------~~L~i~snkTI~G~ga~i~I~G~g~l~i~-~a~NVIIrnL~I~~~~p~ 195 (349)
.+|.|.|||||+|+|++++|+|.+ |+|+ +++|||||||+||++.+
T Consensus 70 ~~~~~~i~~~~~~~~~~~~~p~~ti~~~~a~~~~i~v~snkTI~G~g~~~~I~G~g-l~i~~~a~NVIIrnl~i~~~~~- 147 (359)
T 1qcx_A 70 SQCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKG-LRVVSGAKNVIIQNIAVTDINP- 147 (359)
T ss_dssp TTBCEEECGGGHHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCC-EEEETTCCCEEEESCEEEEECT-
T ss_pred ccccceecccccccccccCCccceeeecccccceEEeCCCceEEecCCceEEecce-EEEecCCCCEEEeCcEEEecCC-
Confidence 368899999999999999999998 9998 89999999999999754
Q ss_pred CCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCee-eeeeCCceEEEEcceec-----------cC-Cc
Q 018853 196 GNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLI-DAIMGSTGITISNNYFS-----------HH-NE 262 (349)
Q Consensus 196 ~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dgli-d~~~gs~~ITISnn~f~-----------~h-~k 262 (349)
++ .+++|||++++++|||||||+|+|+.||++ +.++++++||||||+|+ +| ++
T Consensus 148 ----------~~----~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~ 213 (359)
T 1qcx_A 148 ----------KY----VWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWG 213 (359)
T ss_dssp ----------TE----ETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCC
T ss_pred ----------cc----cccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccce
Confidence 12 246899999999999999999999999998 45678999999999997 24 68
Q ss_pred eeeccCCCCccCCCCceEEEEeeEecCCCcCcCcccCCC-eEEEEcceEeCCcceEEecCCCceEEEEcceEeCCCCCCc
Q 018853 263 VMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRRG-YIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNA 341 (349)
Q Consensus 263 ~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R~G-~~HvvNN~~~~~~~yaigg~~~~~i~~egN~F~~~~~~~~ 341 (349)
+||+|++| ++|||||+|. ++.+|+||+|++ ++|++||||++|.+|++++++++++++|+|||+++++|+.
T Consensus 214 ~~l~G~sd--------~vT~~~N~f~-~~~~R~Pr~r~~~~~hv~NN~~~n~~~~a~~~~~~~~i~~e~N~F~~~~~~~~ 284 (359)
T 1qcx_A 214 VYLDGSND--------MVTLKGNYFY-NLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNVVVE 284 (359)
T ss_dssp EEECCSSE--------EEEEESCEEE-SBCSCTTEECSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEEEEEEEC
T ss_pred eEEecCCC--------CeehcccEec-cCcccCceecCCceEEEEccEEECccCeEEecCCCceEEEEeeEEECCCcccC
Confidence 99999875 8999999996 799999999986 7999999999999999999999999999999999988754
No 11
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=100.00 E-value=2.8e-54 Score=424.34 Aligned_cols=218 Identities=22% Similarity=0.264 Sum_probs=184.9
Q ss_pred CCcCccC---CCCCCCCCceEEEcCCCCCCCCCCCChhHHHHhhc-----------CCCeEEEEecCeEEEec-------
Q 018853 90 CSVGFAQ---GTLGGKGGQIYVVTDSSDSDPANPTPGTLRHAVIQ-----------TEPIWITFASNMLIKLK------- 148 (349)
Q Consensus 90 ~a~GfG~---~ttGG~gG~v~~VT~~~d~~~~~p~pGtLr~av~~-----------~~P~~IvF~~~g~I~L~------- 148 (349)
...|||. +|+|| +.+++||++++ |++|+++ .+++.+||.++|+|+|.
T Consensus 3 ~~~G~at~~Ggt~gg--~~~~tvtt~~~----------L~~al~~~~~~~~g~~~~~~~~p~vi~v~GtId~~~~~~~~~ 70 (353)
T 1air_A 3 DTGGYAATAGGNVTG--AVSKTATSMQD----------IVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAAN 70 (353)
T ss_dssp BCSSSCBCCTTCSTT--CEEEEESSHHH----------HHHHHHHTTBCTTSCBCTBCSSCEEEEECCCCHHHHHHHHTS
T ss_pred CCCcceecCCCCCCC--cceEEeCCHHH----------HHHHHHhhccccccccccCCCceEEEEEccEEeccccccccc
Confidence 4688986 34443 36788998864 8999965 34555566668899882
Q ss_pred ---------ceEEe---cCCceEEeeCceEEEEeccEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCC
Q 018853 149 ---------HELII---NSYKTIDGRGANVEITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGD 216 (349)
Q Consensus 149 ---------~~L~i---~snkTI~G~ga~i~I~G~g~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgD 216 (349)
.+|.| .|||||+|++++ +.|.+ |+|++++|||||||+|++.. +...++|
T Consensus 71 ~~~~~~~~~~~~~i~~~~sn~TI~G~~~~--~~g~g-l~i~~~~NVIIrnl~i~~~~----------------~~~~~~D 131 (353)
T 1air_A 71 ICGQWSKDPRGVEIKEFTKGITIIGANGS--SANFG-IWIKKSSDVVVQNMRIGYLP----------------GGAKDGD 131 (353)
T ss_dssp GGGSTTSCCCEEEEESBCSCEEEEECTTC--CBSSE-EEEESCCSEEEESCEEESCS----------------CGGGTCC
T ss_pred cccccccCCCceEEEecCCCEEEEeccCC--CCCce-EEEeccCcEEEeccEEEeCC----------------CCCCCCC
Confidence 56777 599999999875 45665 99999999999999999531 1235789
Q ss_pred cEEeeCCceEEEEeeEEecC-------------CCCeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEE
Q 018853 217 GISIFGSQKIWVDHCSLSYC-------------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIA 283 (349)
Q Consensus 217 aIsi~gs~nVWIDHcS~s~~-------------~Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~ 283 (349)
+|+|++++|||||||+|+|. .||++|+++++++||||||+|++|+|+||+|++|++. +++||||
T Consensus 132 aI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~---g~~vT~h 208 (353)
T 1air_A 132 MIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDT---GRNITYH 208 (353)
T ss_dssp SEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCC---CCEEEEE
T ss_pred eEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCC---CceEEEE
Confidence 99999999999999999986 2999999999999999999999999999999998654 3799999
Q ss_pred eeEecCCCcCcCcccCCCeEEEEcceEeCCcceEEecCCCceEEEEcceEeCCCCCCcc
Q 018853 284 FNHFGVALVQRMPRCRRGYIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTAPPDDNAK 342 (349)
Q Consensus 284 hN~F~~n~~~R~Pr~R~G~~HvvNN~~~~~~~yaigg~~~~~i~~egN~F~~~~~~~~k 342 (349)
||||. ++.+|+||+|+|++|++||||++|.+|++++++++++++|+|||+++++|+.+
T Consensus 209 hN~f~-~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~i~~e~N~F~~~~~p~~~ 266 (353)
T 1air_A 209 HNYYN-DVNARLPLQRGGLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKAINPVTS 266 (353)
T ss_dssp SCEEE-EEEECSCEEESSEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEEESSEEE
T ss_pred ceEEc-CCcCCCCCCcCceEEEEccEEECCCCceeccCCCcEEEEEceEEECCCCceEe
Confidence 99995 79999999999999999999999999999999999999999999999877543
No 12
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=98.64 E-value=1.3e-06 Score=91.15 Aligned_cols=127 Identities=17% Similarity=0.149 Sum_probs=86.5
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeC------CceEEEEeeEEecCCCCeeeeeeC
Q 018853 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG------SQKIWVDHCSLSYCTDGLIDAIMG 246 (349)
Q Consensus 173 ~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~g------s~nVWIDHcS~s~~~Dglid~~~g 246 (349)
.|.+..++||.|++|+++++ |.....|.+ |. ..|++.+++ ++||||++|.+..+.|..|.+ +.
T Consensus 136 lI~f~~c~NV~I~gVti~NS-p~~gI~I~~-~~--------~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaI-ks 204 (609)
T 3gq8_A 136 NLSIRACHNVYIRDIEAVDC-TLHGIDITC-GG--------LDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITT-HH 204 (609)
T ss_dssp SEEEESCEEEEEEEEEEESC-SSCSEEEEC-SS--------SSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEE-CS
T ss_pred EEEEEeeceEEEEeeEEEeC-CCCCeEEeC-CC--------CCccccCCCccccccceeEEEEeeEEEecCCCEEEe-cC
Confidence 57788999999999999986 222222222 11 126666666 999999999998877777755 67
Q ss_pred CceEEEEcceeccCC-----ceeeccCCCCccCCCCceEEEEeeEecCCCcCcCcccC----C---CeEEEEcceEe-CC
Q 018853 247 STGITISNNYFSHHN-----EVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR----R---GYIHVVNNDFT-SW 313 (349)
Q Consensus 247 s~~ITISnn~f~~h~-----k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R----~---G~~HvvNN~~~-~~ 313 (349)
+++|+|+||.+.++. .++-+|.. ..+|++.+|.|. ++ .|.-|++ . -.+|+.||+.+ ++
T Consensus 205 seNI~I~Nc~~~gp~G~S~~~GIsIGsg-------s~NVtV~Nc~i~-nt-~~GIrIKt~~~~~~v~NV~I~n~vs~~nv 275 (609)
T 3gq8_A 205 SQYINILNCYSHDPRLTANCNGFEIDDG-------SRHVVLSNNRSK-GC-YGGIEIKAHGDAPAAYNISINGHMSVEDV 275 (609)
T ss_dssp CEEEEEESCEEECCSSCSSCCSEEECTT-------CEEEEEESEEEE-SS-SEEEEEEECTTSCCCEEEEEEEEEEESCS
T ss_pred CeeEEEEeEEEECCCCCCCcccEEccCC-------cccEEEEeeEEE-CC-CCEEEEEecCCCCccccEEEECCEeecCc
Confidence 999999999996542 23333421 158999999995 33 3444443 1 17899998664 55
Q ss_pred cceEEe
Q 018853 314 EMYAIG 319 (349)
Q Consensus 314 ~~yaig 319 (349)
.+|.+.
T Consensus 276 rsyn~r 281 (609)
T 3gq8_A 276 RSYNFR 281 (609)
T ss_dssp EEEEEE
T ss_pred eEecce
Confidence 666653
No 13
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=98.46 E-value=1.2e-06 Score=93.18 Aligned_cols=149 Identities=17% Similarity=0.217 Sum_probs=95.9
Q ss_pred eEEecCCceEEeeCce----EEEEe---ccEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeC
Q 018853 150 ELIINSYKTIDGRGAN----VEITG---NGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG 222 (349)
Q Consensus 150 ~L~i~snkTI~G~ga~----i~I~G---~g~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~g 222 (349)
.|.|... ||+|+|.. ....+ ..+|.+..++||.|++|+++++. ...-.|.+ |. ..|++.+++
T Consensus 107 NItItG~-TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp-~~gI~I~n-p~--------~NDGid~DG 175 (772)
T 3gqn_A 107 NIFLSSF-TLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCT-LHGIDITC-GG--------LDYPYLGDG 175 (772)
T ss_dssp EEEEEEE-EEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCS-SCSEEEEC-SS--------SSCCCCCTT
T ss_pred eEEEEee-EEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCC-CCCEEEeC-CC--------cCCcCCCcC
Confidence 3444333 88886542 11111 12578889999999999999862 22222322 11 126666666
Q ss_pred ------CceEEEEeeEEecCCCCeeeeeeCCceEEEEcceeccCC-----ceeeccCCCCccCCCCceEEEEeeEecCCC
Q 018853 223 ------SQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHN-----EVMLLGHNDKYALDMGMQVTIAFNHFGVAL 291 (349)
Q Consensus 223 ------s~nVWIDHcS~s~~~Dglid~~~gs~~ITISnn~f~~h~-----k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~ 291 (349)
++||||++|.++.+.|..|.+ +.+++|+|+||.+.++. .++-+|.. ..+|++.+|.|. ++
T Consensus 176 i~fdi~S~NV~I~Nc~I~ntGDDcIAI-ksSeNI~I~Nc~c~gphG~S~~~GIsIGsg-------s~NVtV~Nc~~~-nT 246 (772)
T 3gqn_A 176 TTAPNPSENIWIENCEATGFGDDGITT-HHSQYINILNCYSHDPRLTANCNGFEIDDG-------SRHVVLSNNRSK-GC 246 (772)
T ss_dssp CCCSSCCEEEEEESCEEESCSSCSEEE-CSCEEEEEESCEEECCSSSSSCCSEEECTT-------CEEEEEEEEEEE-SS
T ss_pred cccccccceEEEEeeEEEecCcCeEEe-cCCceEEEEeEEEECCCCCCCcccEEecCC-------cccEEEEceEEE-CC
Confidence 999999999998877777765 67999999999996542 23333321 158999999995 33
Q ss_pred cCcCcccC-C------CeEEEEcceEe-CCcceEEe
Q 018853 292 VQRMPRCR-R------GYIHVVNNDFT-SWEMYAIG 319 (349)
Q Consensus 292 ~~R~Pr~R-~------G~~HvvNN~~~-~~~~yaig 319 (349)
.|.=|++ + -.+|+.||+.+ ++.+|.+.
T Consensus 247 -~nGIRIKt~~~gg~v~NV~I~gnis~~dvrsynir 281 (772)
T 3gqn_A 247 -YGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFR 281 (772)
T ss_dssp -SEEEEECCCTTSCCCEEEEEEEEEEESCSEEEEEC
T ss_pred -CcEEEEEEeCCCCccccEEEECCEEeccCeEecce
Confidence 3444433 1 16889988876 45556653
No 14
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.42 E-value=1.9e-05 Score=76.15 Aligned_cols=153 Identities=10% Similarity=0.033 Sum_probs=87.3
Q ss_pred eeccEEEEeeEEEeeccCCCccccCCCCcccc----CCCCCCCcEEeeCCceEEEEeeE-EecCCCCeeeeeeCCceEEE
Q 018853 178 YVSHVIIHNVHIHHCKPSGNTMIASSPTHVGY----RGKSDGDGISIFGSQKIWVDHCS-LSYCTDGLIDAIMGSTGITI 252 (349)
Q Consensus 178 ~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~----r~~~dgDaIsi~gs~nVWIDHcS-~s~~~Dglid~~~gs~~ITI 252 (349)
.++|+.|++++|++... ..-.+..+....-. ......|||.+..++++.|.+|. +....||. ++..++++++|
T Consensus 132 ~~~nv~I~~~~i~n~~~-~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI-~~~~~s~~v~I 209 (377)
T 2pyg_A 132 ADRDVTIERVEVREMSG-YGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGF-NVVTSTHDFVM 209 (377)
T ss_dssp CEEEEEEEEEEEECCSS-CSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSE-EEETTCEEEEE
T ss_pred cccceEEEeEEEEeccc-ceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcE-EEEeccCCeEE
Confidence 46788888888886531 11111111000000 01256799999999999999994 45556665 45566999999
Q ss_pred EcceeccCCce-eec--cCCCCccCCCCceEEEEeeEecCCCcCcCcccC-CCeEEEEcceEeCCcceEEecCCCceEEE
Q 018853 253 SNNYFSHHNEV-MLL--GHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-RGYIHVVNNDFTSWEMYAIGGSANPTINS 328 (349)
Q Consensus 253 Snn~f~~h~k~-~L~--G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R-~G~~HvvNN~~~~~~~yaigg~~~~~i~~ 328 (349)
++|.+.+...+ .++ |+.+.. ...++++.+|.+.. ...+...+. ...+.+.||.+++-..++|.-.....+.+
T Consensus 210 ~nN~i~~~~~g~~~~~~g~~~~~---~s~nv~i~~N~~~~-n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g~~~~~i 285 (377)
T 2pyg_A 210 TNNVAYGNGSSGLVVQRGLEDLA---LPSNILIDGGAYYD-NAREGVLLKMTSDITLQNADIHGNGSSGVRVYGAQDVQI 285 (377)
T ss_dssp ESCEEESCSSCSEEEECCSSCCC---CCEEEEEESCEEES-CSSCSEEEEEEEEEEEESCEEESCSSCSEEEEEEEEEEE
T ss_pred ECCEEECccCceEEEeccccCCC---CCccEEEECCEEEc-CccCceEeccccCeEEECCEEECCCCceEEEecCCCcEE
Confidence 99999875443 332 322111 12468888887743 222222211 23567778877765444433222346677
Q ss_pred EcceEeCC
Q 018853 329 QGNRYTAP 336 (349)
Q Consensus 329 egN~F~~~ 336 (349)
++|.|...
T Consensus 286 ~~N~i~~n 293 (377)
T 2pyg_A 286 LDNQIHDN 293 (377)
T ss_dssp ESCEEESC
T ss_pred ECcEEECC
Confidence 77777753
No 15
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.26 E-value=4.5e-06 Score=83.24 Aligned_cols=191 Identities=16% Similarity=0.155 Sum_probs=126.7
Q ss_pred EEEEecCeEEEecceEEec-CCceEEeeCceEE---EE------e-------ccEEEEeee-----------------cc
Q 018853 136 WITFASNMLIKLKHELIIN-SYKTIDGRGANVE---IT------G-------NGCLTLQYV-----------------SH 181 (349)
Q Consensus 136 ~IvF~~~g~I~L~~~L~i~-snkTI~G~ga~i~---I~------G-------~g~l~i~~a-----------------~N 181 (349)
+|++ ..|+.+|+.++.|+ |++||.|.+.+++ |. | ++.|++..+ ++
T Consensus 59 vI~L-~~G~Y~l~g~ivIdkp~LtL~G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~ 137 (410)
T 2inu_A 59 AIII-PPGDYDLHTQVVVDVSYLTIAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSG 137 (410)
T ss_dssp EEEC-CSEEEEECSCEEECCTTEEEECSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEEC
T ss_pred EEEE-CCCeeccCCcEEEecCcEEEEecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCC
Confidence 4444 45788888899995 5599999875544 55 2 224555443 89
Q ss_pred EEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeC-CceEEEEeeEEecCCCCeeeeeeCCceEEEEcceecc-
Q 018853 182 VIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFG-SQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSH- 259 (349)
Q Consensus 182 VIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~g-s~nVWIDHcS~s~~~Dglid~~~gs~~ITISnn~f~~- 259 (349)
|.|++|.|+++. ++.+ |.....+.-||.+.. ++++.|.+|.|....-|.. .+++++++|.+|.+.+
T Consensus 138 V~~~~v~I~G~~------~~~~----G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~--l~~a~~~~I~~N~I~e~ 205 (410)
T 2inu_A 138 IVFRDFCLDGVG------FTPG----KNSYHNGKTGIEVASDNDSFHITGMGFVYLEHALI--VRGADALRVNDNMIAEC 205 (410)
T ss_dssp CEEESCEEECCC------CSSS----TTSCCCSCEEEEECSCEESCEEESCEEESCSEEEE--ETTEESCEEESCEEESS
T ss_pred cEECCEEEECCE------eecC----CCCcccCceeEEEeccCCeEEEECCEEecccEEEE--EccCCCcEEECCEEEec
Confidence 999999998763 1111 222345667899985 8889999999999999987 6899999999999995
Q ss_pred CCceeeccCCCC--------ccCCCC--ceEEE-EeeEecCCCcCcCcccCCC-------eEEEEcceEeCCc-ceEEec
Q 018853 260 HNEVMLLGHNDK--------YALDMG--MQVTI-AFNHFGVALVQRMPRCRRG-------YIHVVNNDFTSWE-MYAIGG 320 (349)
Q Consensus 260 h~k~~L~G~sd~--------~~~d~g--~~VTi-~hN~F~~n~~~R~Pr~R~G-------~~HvvNN~~~~~~-~yaigg 320 (349)
-+...|+|.++. ....+| ..+.. .++++..| ...|+.|+| ...+.||.+.+.. .+.+-.
T Consensus 206 GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~ns~~~~I~~N--~i~~~~R~gIh~m~s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 206 GNCVELTGAGQATIVSGNHMGAGPDGVTLLAENHEGLLVTGN--NLFPRGRSLIEFTGCNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp SEEEEECSCEESCEEESCEEECCTTSEEEEEESEESCEEESC--EECSCSSEEEEEESCBSCEEESCEEEESSSCSEEEE
T ss_pred CCceeeccccccceEecceeeecCCCCEEEEEeCCCCEEECC--CcccCcceEEEEEccCCCEEECCEEecceeEEEEEE
Confidence 345678883311 124455 55544 66777543 234667765 2456788887653 222222
Q ss_pred CCCceEEEEcceEeCCCCCCc
Q 018853 321 SANPTINSQGNRYTAPPDDNA 341 (349)
Q Consensus 321 ~~~~~i~~egN~F~~~~~~~~ 341 (349)
+......+++|.|.....+++
T Consensus 284 s~~~~n~v~~N~f~~~~~g~a 304 (410)
T 2inu_A 284 NGCKENLITANHIRRTNEGYP 304 (410)
T ss_dssp SSCBSCEEESCEEEEECCCSG
T ss_pred cCCCCCEEECCEEeccCCcee
Confidence 222357789999996655533
No 16
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.23 E-value=3.8e-05 Score=78.68 Aligned_cols=122 Identities=16% Similarity=0.221 Sum_probs=79.4
Q ss_pred ChhHHHHhhcCCC-eEEEEecCeEEEecceEEe------cCCceEEeeC-ceEEEEeccEEEEeeeccEEEEeeEEEeec
Q 018853 122 PGTLRHAVIQTEP-IWITFASNMLIKLKHELII------NSYKTIDGRG-ANVEITGNGCLTLQYVSHVIIHNVHIHHCK 193 (349)
Q Consensus 122 pGtLr~av~~~~P-~~IvF~~~g~I~L~~~L~i------~snkTI~G~g-a~i~I~G~g~l~i~~a~NVIIrnL~I~~~~ 193 (349)
+.+|++|+.+-.| -+|++. .|+-+- ..|.+ ...+||.|.+ ..+.|.|...|++ .+++|.|++|+|++..
T Consensus 31 ~~~Lq~Ai~~A~pGDtI~L~-~GtY~~-~~i~i~~sGt~~~pItl~~~~~~~~vi~G~~~l~i-~g~~v~i~GL~i~~~~ 107 (506)
T 1dbg_A 31 NETLYQVVKEVKPGGLVQIA-DGTYKD-VQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVEL-RGEHLILEGIWFKDGN 107 (506)
T ss_dssp HHHHHHHHHHCCTTCEEEEC-SEEEET-CEEEECCCCBTTBCEEEEESSTTSEEEEESCEEEE-CSSSEEEESCEEEEEC
T ss_pred HHHHHHHHHhCCCCCEEEEC-CCEEec-ceEEEecCCcCCCCEEEECCCCCccEEeCCceEEE-EcCCEEEECeEEECCC
Confidence 4479999976544 455553 455542 25666 5789999974 3588888777888 4899999999999853
Q ss_pred cCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCC--eeeee-------eCCceEEEEcceecc
Q 018853 194 PSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDG--LIDAI-------MGSTGITISNNYFSH 259 (349)
Q Consensus 194 p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dg--lid~~-------~gs~~ITISnn~f~~ 259 (349)
. .. ..++ ..+..++.+. ++++-|.+|.|....++ .. +. ..+.+.+|.+|.|..
T Consensus 108 ~---~~-------~~~~-~~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~-i~~~~~~~~l~g~~n~I~~N~I~G 169 (506)
T 1dbg_A 108 R---AI-------QAWK-SHGPGLVAIY-GSYNRITACVFDCFDEANSAY-ITTSLTEDGKVPQHCRIDHCSFTD 169 (506)
T ss_dssp C---CT-------TTCC-TTSCCSEEEC-SSSCEEESCEEESCCSSCSCS-EEECCCTTCCCCCSCEEESCEEEC
T ss_pred c---ce-------eeee-cccccceEEe-cCCeEEEeeEEEcCCCCceee-EeecccceeeeccccEEECcEEEC
Confidence 1 00 0010 0123456666 47778888888887766 22 11 134566788888875
No 17
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.13 E-value=0.00042 Score=68.89 Aligned_cols=114 Identities=10% Similarity=0.052 Sum_probs=74.6
Q ss_pred ChhHHHHhhcCCC-eEEEEecCeEEE--ec----ceEEec------CCceEEeeC-ceEEEEec----------cEEEEe
Q 018853 122 PGTLRHAVIQTEP-IWITFASNMLIK--LK----HELIIN------SYKTIDGRG-ANVEITGN----------GCLTLQ 177 (349)
Q Consensus 122 pGtLr~av~~~~P-~~IvF~~~g~I~--L~----~~L~i~------snkTI~G~g-a~i~I~G~----------g~l~i~ 177 (349)
|-||.+|+.+-.| -+|++ ..|+.. +. ..|.+. ..+||.|.+ ..+.|.++ ..|+|
T Consensus 35 P~tiq~Ai~~a~pGdtI~l-~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~~g~~~vI~~~~~~g~~~~~~~~i~i- 112 (400)
T 1ru4_A 35 PMSFSAAMAAVNPGELILL-KPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAANCGRAVFDFSFPDSQWVQASYGFYV- 112 (400)
T ss_dssp CBCHHHHHHHCCTTCEEEE-CSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEGGGCCEEEECCCCTTCCCTTCCSEEE-
T ss_pred CccHHHHHhhCCCCCEEEE-CCCeEccccccccceeEEecCCCCCCCCEEEEEecCCCCEEeCCccCCccccceeEEEE-
Confidence 4499999987545 34555 467777 43 345552 348998875 35667521 22777
Q ss_pred eeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEEEccee
Q 018853 178 YVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYF 257 (349)
Q Consensus 178 ~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITISnn~f 257 (349)
.++++.|++|+|++.. ..||.+.+ +++.|++|.|....+.-|.+...+.+.+|.+|.+
T Consensus 113 ~~~~~~i~gl~I~n~g---------------------~~GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i 170 (400)
T 1ru4_A 113 TGDYWYFKGVEVTRAG---------------------YQGAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDA 170 (400)
T ss_dssp CSSCEEEESEEEESCS---------------------SCSEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEE
T ss_pred ECCeEEEEeEEEEeCC---------------------CCcEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEE
Confidence 6899999999998631 12777776 5667888888887773333443444777777777
Q ss_pred cc
Q 018853 258 SH 259 (349)
Q Consensus 258 ~~ 259 (349)
.+
T Consensus 171 ~~ 172 (400)
T 1ru4_A 171 YR 172 (400)
T ss_dssp EC
T ss_pred Ec
Confidence 64
No 18
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=98.10 E-value=3.3e-05 Score=75.72 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=70.5
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeee-----CCc
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIM-----GST 248 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~-----gs~ 248 (349)
+.+..++||.|+|++|+.-. .....|||.+.+++||+|++|.++...|. +.++. ++.
T Consensus 177 i~~~~~~~v~i~~v~I~~~~-----------------~~~NtDGid~~~s~nV~I~n~~i~~gDDc-Iaiks~~~~~~s~ 238 (376)
T 1bhe_A 177 VVFSDGDGFTAWKTTIKTPS-----------------TARNTDGIDPMSSKNITIAYSNIATGDDN-VAIKAYKGRAETR 238 (376)
T ss_dssp EEEESCEEEEEEEEEEECCT-----------------TCSSCCSEEEESCEEEEEESCEEECSSCS-EEEEECTTSCCEE
T ss_pred EEEeCCCcEEEEeEEEECCC-----------------CCCCCceEeecCCceEEEEeCEEecCCCe-EEEcccCCCCCce
Confidence 56668999999999998421 12357999999999999999999876555 55653 789
Q ss_pred eEEEEcceeccCCceeeccCCCCccCCCC-ceEEEEeeEec
Q 018853 249 GITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (349)
Q Consensus 249 ~ITISnn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~ 288 (349)
+|+|+||.|.. ..++-+|+..+ + .+|++.+|.|.
T Consensus 239 nI~I~n~~~~~-ghGisiGSe~~-----~v~nV~v~n~~~~ 273 (376)
T 1bhe_A 239 NISILHNDFGT-GHGMSIGSETM-----GVYNVTVDDLKMN 273 (376)
T ss_dssp EEEEEEEEECS-SSCEEEEEEES-----SEEEEEEEEEEEE
T ss_pred EEEEEeeEEEc-cccEEeccCCc-----cEeeEEEEeeEEe
Confidence 99999999985 33466776422 3 57999999995
No 19
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.99 E-value=8.7e-05 Score=71.91 Aligned_cols=98 Identities=16% Similarity=0.230 Sum_probs=71.9
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEEE
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITIS 253 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITIS 253 (349)
+.+..++||.|++++|.... ++. ......|||.+..++||+|.+|.++.+.|. +.++ .+.+|+|+
T Consensus 126 i~i~~~~nv~i~~~~I~~~~--~d~-----------~~~~ntDGid~~~s~nV~I~n~~i~~gDDc-iaik-sg~nI~i~ 190 (339)
T 2iq7_A 126 FSINSATTLGVYDVIIDNSA--GDS-----------AGGHNTDAFDVGSSTGVYISGANVKNQDDC-LAIN-SGTNITFT 190 (339)
T ss_dssp EEEESCEEEEEESCEEECGG--GGG-----------TTCCSCCSEEEESCEEEEEESCEEECSSCS-EEES-SEEEEEEE
T ss_pred EEEeccCCEEEEEEEEECCc--ccc-----------ccCCCCCcEEEcCcceEEEEecEEecCCCE-EEEc-CCccEEEE
Confidence 67778999999999998521 100 002357999999999999999999987665 4444 45899999
Q ss_pred cceeccCCceeeccCCCCccCCCC-ceEEEEeeEec
Q 018853 254 NNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (349)
Q Consensus 254 nn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~ 288 (349)
||.+.... ++-+|+...+. ..+ .+|++.++.|.
T Consensus 191 n~~~~~gh-GisiGSlg~~~-~~~v~nV~v~n~~~~ 224 (339)
T 2iq7_A 191 GGTCSGGH-GLSIGSVGGRS-DNTVKTVTISNSKIV 224 (339)
T ss_dssp SCEEESSC-CEEEEEESSSS-CCEEEEEEEEEEEEE
T ss_pred eEEEECCc-eEEECcCCccc-CCCEEEEEEEeeEEE
Confidence 99999743 46777743231 122 57999999995
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.99 E-value=2.8e-05 Score=78.43 Aligned_cols=91 Identities=20% Similarity=0.293 Sum_probs=69.7
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeC-------
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMG------- 246 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~g------- 246 (349)
+.+..++||.|+||+|... ....|||.+.+++||+|++|.+.. .|..+.++.+
T Consensus 216 i~~~~~~nv~i~~v~I~~~-------------------~~NtDGidi~~s~nV~I~n~~i~~-gDDcIaiksg~~~dg~~ 275 (448)
T 3jur_A 216 IHPVLSENVIIRNIEISST-------------------GPNNDGIDPESCKYMLIEKCRFDT-GDDSVVIKSGRDADGRR 275 (448)
T ss_dssp EEEESCEEEEEESCEEEEC-------------------STTCCSBCCBSCEEEEEESCEEEE-SSEEEEEBCCCHHHHHH
T ss_pred EeeeccCCEEEEeEEEeec-------------------cCCCccccccCCcCEEEEeeEEEe-CCCcEEeccCccccccc
Confidence 6666899999999999852 125799999999999999999997 4556666655
Q ss_pred ----CceEEEEccee--ccCCceeeccCCCCccCCCC-ceEEEEeeEec
Q 018853 247 ----STGITISNNYF--SHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (349)
Q Consensus 247 ----s~~ITISnn~f--~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~ 288 (349)
+.+|+|+||.+ ..-..+.-+|+.- ..+ .+|++.++.|.
T Consensus 276 ~~~ps~nI~I~n~~~~~~~gh~gisiGS~~----~~~v~nV~v~n~~~~ 320 (448)
T 3jur_A 276 IGVPSEYILVRDNLVISQASHGGLVIGSEM----SGGVRNVVARNNVYM 320 (448)
T ss_dssp HCCCEEEEEEESCEEECSSCSEEEEECSSC----TTCEEEEEEESCEEE
T ss_pred cCCCceeEEEEEeEEecCCCcceEEECCcc----cCcEEEEEEEEEEEe
Confidence 78999999999 3222366778642 123 57999999994
No 21
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.96 E-value=0.00011 Score=71.27 Aligned_cols=107 Identities=13% Similarity=0.157 Sum_probs=80.7
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecC---------CCCeeee
Q 018853 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC---------TDGLIDA 243 (349)
Q Consensus 173 ~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~---------~Dglid~ 243 (349)
.|.+.+++||.|++|+|++. ...+|.+.++++|.|++|++... .|| +|+
T Consensus 102 ~i~~~~~~nv~i~giti~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~ 159 (339)
T 2iq7_A 102 FFYAHSLKSSNIKGLNVLNT---------------------PVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDA-FDV 159 (339)
T ss_dssp CEEEEEEEEEEEECCEEECC---------------------SSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCS-EEE
T ss_pred EEEEeeeCcEEEEEEEEEeC---------------------CcceEEEeccCCEEEEEEEEECCccccccCCCCCc-EEE
Confidence 47888899999999999863 23679999999999999999864 567 454
Q ss_pred eeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcCccc------C---CCeEEEEcceEeCC
Q 018853 244 IMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC------R---RGYIHVVNNDFTSW 313 (349)
Q Consensus 244 ~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~------R---~G~~HvvNN~~~~~ 313 (349)
..+++|+|++|.|...+.+.-++++ .+|++.+|.+..+. . . .+ . .-.++|.|+.+.+-
T Consensus 160 -~~s~nV~I~n~~i~~gDDciaiksg--------~nI~i~n~~~~~gh-G-i-siGSlg~~~~~~v~nV~v~n~~~~~~ 226 (339)
T 2iq7_A 160 -GSSTGVYISGANVKNQDDCLAINSG--------TNITFTGGTCSGGH-G-L-SIGSVGGRSDNTVKTVTISNSKIVNS 226 (339)
T ss_dssp -ESCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEESSC-C-E-EEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred -cCcceEEEEecEEecCCCEEEEcCC--------ccEEEEeEEEECCc-e-E-EECcCCcccCCCEEEEEEEeeEEECC
Confidence 5799999999999987766666543 48999999996432 1 1 11 0 11578888888764
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=97.95 E-value=0.00012 Score=71.05 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=71.6
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEEE
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITIS 253 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITIS 253 (349)
+.+..++||.|+|++|.... ++. . .....|||.+..++||+|.+|.++...|. +.++ .+.+|+|+
T Consensus 130 i~i~~~~nv~i~~~~I~~~~--~d~-------~----~~~ntDGid~~~s~nV~I~n~~i~~gDDc-Iaik-sg~nI~i~ 194 (339)
T 1ia5_A 130 FSVAGSDYLTLKDITIDNSD--GDD-------N----GGHNTDAFDIGTSTYVTISGATVYNQDDC-VAVN-SGENIYFS 194 (339)
T ss_dssp EEEESCEEEEEESCEEECGG--GTT-------T----TCCSCCSEEEESCEEEEEESCEEECSSCS-EEES-SEEEEEEE
T ss_pred EEEecccCeEEeeEEEECCc--ccc-------c----cCCCCCcEEecCCceEEEEeeEEEcCCCe-EEEe-CCeEEEEE
Confidence 67778999999999998521 110 0 02357999999999999999999977665 4444 45899999
Q ss_pred cceeccCCceeeccCCCCccCCCC-ceEEEEeeEec
Q 018853 254 NNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (349)
Q Consensus 254 nn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~ 288 (349)
||.+.... ++-+|+...+. ..+ .+|++.++.|.
T Consensus 195 n~~~~~gh-GisiGS~g~~~-~~~v~nV~v~n~~~~ 228 (339)
T 1ia5_A 195 GGYCSGGH-GLSIGSVGGRS-DNTVKNVTFVDSTII 228 (339)
T ss_dssp SCEEESSS-CEEEEEECSSS-CCEEEEEEEEEEEEE
T ss_pred eEEEECCc-eEEECcCCccc-CCCEEEEEEEeeEEE
Confidence 99999633 57778743331 122 57999999995
No 23
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.94 E-value=0.00011 Score=71.11 Aligned_cols=108 Identities=17% Similarity=0.222 Sum_probs=70.6
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccc------------cCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCee
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMI------------ASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLI 241 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v------------~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dgli 241 (349)
|.+..++||.|++|+|++. |...-.+ .+++. .. ......|||.+..++||+|.+|.++.+.|. +
T Consensus 103 i~~~~~~nv~i~~i~i~ns-p~~~i~i~~~nv~i~~~~I~~~~~-d~-~~~~ntDGidi~~s~nV~I~n~~i~~gDDc-i 178 (336)
T 1nhc_A 103 MYIHDVEDSTFKGINIKNT-PVQAISVQATNVHLNDFTIDNSDG-DD-NGGHNTDGFDISESTGVYISGATVKNQDDC-I 178 (336)
T ss_dssp EEEEEEEEEEEESCEEECC-SSCCEEEEEEEEEEESCEEECTTH-HH-HTCCSCCSEEECSCEEEEEESCEEESSSEE-E
T ss_pred EEEeeeCcEEEEEEEEEeC-CccEEEEEeCCEEEEEEEEECCCc-cc-ccCCCCCcEEecCCCeEEEEeCEEEcCCCE-E
Confidence 6666777788887777764 1111111 11100 00 002357999999999999999999887664 4
Q ss_pred eeeeCCceEEEEcceeccCCceeeccCCCCccCCCC-ceEEEEeeEec
Q 018853 242 DAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (349)
Q Consensus 242 d~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~ 288 (349)
.++ .+.+|+|+||.+..-. ++.+|+...+. ..+ ..|++.++.|.
T Consensus 179 aik-sg~nI~i~n~~~~~gh-GisiGS~g~~~-~~~v~nV~v~n~~~~ 223 (336)
T 1nhc_A 179 AIN-SGESISFTGGTCSGGH-GLSIGSVGGRD-DNTVKNVTISDSTVS 223 (336)
T ss_dssp EES-SEEEEEEESCEEESSS-EEEEEEESSSS-CCEEEEEEEEEEEEE
T ss_pred EEe-CCeEEEEEeEEEECCc-CceEccCcccc-CCCEEEEEEEeeEEE
Confidence 444 4589999999999633 57778743331 122 57999999995
No 24
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.90 E-value=0.00014 Score=75.78 Aligned_cols=92 Identities=20% Similarity=0.209 Sum_probs=69.3
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeC-------
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMG------- 246 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~g------- 246 (349)
+.+..++||.|+|++|... .....|||.+.+++||+|++|.+..+ |..+.++.+
T Consensus 357 i~~~~~~nv~i~~v~i~~~------------------~~~NtDGidi~~s~nV~I~n~~i~~g-DD~Iaiksg~~~~g~~ 417 (608)
T 2uvf_A 357 IMNLENHNVVANGLIHQTY------------------DANNGDGIEFGNSQNVMVFNNFFDTG-DDCINFAAGTGEKAQE 417 (608)
T ss_dssp EEEESCEEEEEESCEEECT------------------TCTTCCSEEEESCEEEEEESCEEECS-SCSEEEECCCSGGGGG
T ss_pred EEEecCCCEEEeeEEEcCC------------------CCCCCCeEEecCCceEEEEeeEEecC-CceEEecCCcCccccc
Confidence 6677899999999998631 01257999999999999999999976 444445433
Q ss_pred ---CceEEEEcceeccCCceeeccCCCCccCCCC-ceEEEEeeEec
Q 018853 247 ---STGITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (349)
Q Consensus 247 ---s~~ITISnn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~ 288 (349)
+.+|+|+||.+..-.....+|+.. ..+ .+|++.+|.|.
T Consensus 418 ~~~s~nI~I~n~~~~~ghg~~~iGS~~----~~~v~nI~v~n~~~~ 459 (608)
T 2uvf_A 418 QEPMKGAWLFNNYFRMGHGAIVTGSHT----GAWIEDILAENNVMY 459 (608)
T ss_dssp SCCEEEEEEESCEECSSSCSEEEESCC----TTCEEEEEEESCEEE
T ss_pred cccccCEEEEeEEEeCCCCeEEEcccC----CCCEEEEEEEeEEEE
Confidence 689999999998744444578732 123 57999999995
No 25
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.82 E-value=0.0013 Score=64.28 Aligned_cols=136 Identities=12% Similarity=0.108 Sum_probs=92.6
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEec-----CCCCeeeeeeCC
Q 018853 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSY-----CTDGLIDAIMGS 247 (349)
Q Consensus 173 ~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~-----~~Dglid~~~gs 247 (349)
.|.+.+++||.|++|+|+++. .-.+.+.++++|.|+++++.. -.||. |+ ..|
T Consensus 153 ~i~~~~~~nv~I~~iti~nsp---------------------~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGi-d~-~~s 209 (376)
T 1bhe_A 153 LIQINKSKNFTLYNVSLINSP---------------------NFHVVFSDGDGFTAWKTTIKTPSTARNTDGI-DP-MSS 209 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCS---------------------SCSEEEESCEEEEEEEEEEECCTTCSSCCSE-EE-ESC
T ss_pred EEEEEcceEEEEEeEEEECCC---------------------cEEEEEeCCCcEEEEeEEEECCCCCCCCceE-ee-cCC
Confidence 478889999999999999741 236888999999999999987 36775 53 579
Q ss_pred ceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcCcccCC-------CeEEEEcceEeCCcceEEe-
Q 018853 248 TGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCRR-------GYIHVVNNDFTSWEMYAIG- 319 (349)
Q Consensus 248 ~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R~-------G~~HvvNN~~~~~~~yaig- 319 (349)
++|+|++|.|...+.+.-+.+... .....+|++.+|+|..+ .. +.. -.+.|.|+.+.+-. +++.
T Consensus 210 ~nV~I~n~~i~~gDDcIaiks~~~--~~~s~nI~I~n~~~~~g-hG----isiGSe~~~v~nV~v~n~~~~~t~-~GirI 281 (376)
T 1bhe_A 210 KNITIAYSNIATGDDNVAIKAYKG--RAETRNISILHNDFGTG-HG----MSIGSETMGVYNVTVDDLKMNGTT-NGLRI 281 (376)
T ss_dssp EEEEEESCEEECSSCSEEEEECTT--SCCEEEEEEEEEEECSS-SC----EEEEEEESSEEEEEEEEEEEESCS-EEEEE
T ss_pred ceEEEEeCEEecCCCeEEEcccCC--CCCceEEEEEeeEEEcc-cc----EEeccCCccEeeEEEEeeEEeCCC-cEEEE
Confidence 999999999998877665553110 01125899999999642 11 222 26788899888743 2321
Q ss_pred ------cCCCceEEEEcceEeCCCCC
Q 018853 320 ------GSANPTINSQGNRYTAPPDD 339 (349)
Q Consensus 320 ------g~~~~~i~~egN~F~~~~~~ 339 (349)
++.-..|.+++..++....|
T Consensus 282 Kt~~g~~G~v~ni~f~ni~~~~v~~~ 307 (376)
T 1bhe_A 282 KSDKSAAGVVNGVRYSNVVMKNVAKP 307 (376)
T ss_dssp ECCTTTCCEEEEEEEEEEEEESCSEE
T ss_pred EEecCCCceEeeEEEEeEEEeCCCce
Confidence 11122466666666665443
No 26
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.82 E-value=0.00039 Score=69.39 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=75.9
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEEE
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITIS 253 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITIS 253 (349)
|.+..++||.|+|++|... .....|||.+.. +||+|.+|.+..+ |..+.++.++.+|+|+
T Consensus 153 i~i~~~~nv~I~n~~I~~~------------------d~~ntDGidi~~-~nV~I~n~~i~~g-DD~Iai~s~~~nI~I~ 212 (422)
T 1rmg_A 153 FTMDTCSDGEVYNMAIRGG------------------NEGGLDGIDVWG-SNIWVHDVEVTNK-DECVTVKSPANNILVE 212 (422)
T ss_dssp EEEEEEEEEEEEEEEEECC------------------SSTTCCSEEEEE-EEEEEEEEEEESS-SEEEEEEEEEEEEEEE
T ss_pred EEEeCcCCEEEEeEEEECC------------------CCCCCccEeecC-CeEEEEeeEEeCC-CCeEEeCCCCcCEEEE
Confidence 4555667777777777631 012579999999 9999999999865 5556677789999999
Q ss_pred cceeccCCceeeccCCCCccCCCC-ceEEEEeeEecCCCcCcCcccC--CCeEEEEcceEeCCcc
Q 018853 254 NNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFGVALVQRMPRCR--RGYIHVVNNDFTSWEM 315 (349)
Q Consensus 254 nn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~~n~~~R~Pr~R--~G~~HvvNN~~~~~~~ 315 (349)
||.+.... +.-+|+...+ .+ .+|++.+|.|. ++ .+.=|++ .|.-.+-|-.|.|..|
T Consensus 213 n~~~~~~~-GisIGS~g~~---~~v~nV~v~n~~~~-~~-~~Gi~Ikt~~g~G~v~nI~~~NI~~ 271 (422)
T 1rmg_A 213 SIYCNWSG-GCAMGSLGAD---TDVTDIVYRNVYTW-SS-NQMYMIKSNGGSGTVSNVLLENFIG 271 (422)
T ss_dssp EEEEESSS-EEEEEEECTT---EEEEEEEEEEEEEE-SS-SCSEEEEEBBCCEEEEEEEEEEEEE
T ss_pred eEEEcCCc-ceeecccCCC---CcEEEEEEEeEEEe-cc-ceEEEEEecCCCcEEEEEEEEeEEE
Confidence 99988643 6666763211 12 47999999995 33 2333332 2333444545555544
No 27
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=97.81 E-value=0.00018 Score=69.73 Aligned_cols=107 Identities=13% Similarity=0.146 Sum_probs=80.7
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecC---------CCCeeee
Q 018853 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC---------TDGLIDA 243 (349)
Q Consensus 173 ~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~---------~Dglid~ 243 (349)
.|.+.+++||.|++|+|++. ...+|.+.++++|.|++|++... .|| +|+
T Consensus 106 ~i~~~~~~nv~i~~i~i~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDG-id~ 163 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNS---------------------PVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDA-FDI 163 (339)
T ss_dssp CEEEEEEEEEEEESCEEECC---------------------SSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCS-EEE
T ss_pred EEEEeecCcEEEEEEEEEcC---------------------CcceEEEecccCeEEeeEEEECCccccccCCCCCc-EEe
Confidence 47888899999999999863 23689999999999999999863 577 464
Q ss_pred eeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcCccc------C---CCeEEEEcceEeCC
Q 018853 244 IMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC------R---RGYIHVVNNDFTSW 313 (349)
Q Consensus 244 ~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~------R---~G~~HvvNN~~~~~ 313 (349)
..+++|+|++|.|...+.+.-++++ .+|++.+|++..+. . . .+ . .-.++|.|+.+.+-
T Consensus 164 -~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~gh-G-i-siGS~g~~~~~~v~nV~v~n~~~~~t 230 (339)
T 1ia5_A 164 -GTSTYVTISGATVYNQDDCVAVNSG--------ENIYFSGGYCSGGH-G-L-SIGSVGGRSDNTVKNVTFVDSTIINS 230 (339)
T ss_dssp -ESCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEESSS-C-E-EEEEECSSSCCEEEEEEEEEEEEESC
T ss_pred -cCCceEEEEeeEEEcCCCeEEEeCC--------eEEEEEeEEEECCc-e-E-EECcCCcccCCCEEEEEEEeeEEECC
Confidence 5799999999999987776666543 48999999986432 1 1 11 0 11577888887764
No 28
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.79 E-value=0.00061 Score=67.97 Aligned_cols=126 Identities=15% Similarity=0.053 Sum_probs=87.9
Q ss_pred cCCceEEeeCceEE---EEeccEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEe
Q 018853 154 NSYKTIDGRGANVE---ITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDH 230 (349)
Q Consensus 154 ~snkTI~G~ga~i~---I~G~g~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDH 230 (349)
...-||+|+|..-. -.....|.+..++||.|++|+|++. ...+|.+.+++||.|++
T Consensus 107 ~G~G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~ns---------------------p~~~i~i~~~~nv~I~n 165 (422)
T 1rmg_A 107 TSKGAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDA---------------------PAFHFTMDTCSDGEVYN 165 (422)
T ss_dssp SSCCEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECC---------------------SSCSEEEEEEEEEEEEE
T ss_pred ccCEEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECC---------------------CceEEEEeCcCCEEEEe
Confidence 34468888875210 0012247778899999999999863 13579999999999999
Q ss_pred eEEec----CCCCeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcCccc----CCC-
Q 018853 231 CSLSY----CTDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC----RRG- 301 (349)
Q Consensus 231 cS~s~----~~Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~----R~G- 301 (349)
|.+.. ..|| +|+.. ++|+|++|.|...+.+.-+++. ..+|++.+|++... +.=++ +.+
T Consensus 166 ~~I~~~d~~ntDG-idi~~--~nV~I~n~~i~~gDD~Iai~s~-------~~nI~I~n~~~~~~---~GisIGS~g~~~~ 232 (422)
T 1rmg_A 166 MAIRGGNEGGLDG-IDVWG--SNIWVHDVEVTNKDECVTVKSP-------ANNILVESIYCNWS---GGCAMGSLGADTD 232 (422)
T ss_dssp EEEECCSSTTCCS-EEEEE--EEEEEEEEEEESSSEEEEEEEE-------EEEEEEEEEEEESS---SEEEEEEECTTEE
T ss_pred EEEECCCCCCCcc-EeecC--CeEEEEeeEEeCCCCeEEeCCC-------CcCEEEEeEEEcCC---cceeecccCCCCc
Confidence 99997 4677 46654 8999999999987777767651 14799999988532 11111 111
Q ss_pred --eEEEEcceEeCC
Q 018853 302 --YIHVVNNDFTSW 313 (349)
Q Consensus 302 --~~HvvNN~~~~~ 313 (349)
.++|.|+.+.+-
T Consensus 233 v~nV~v~n~~~~~~ 246 (422)
T 1rmg_A 233 VTDIVYRNVYTWSS 246 (422)
T ss_dssp EEEEEEEEEEEESS
T ss_pred EEEEEEEeEEEecc
Confidence 567888888764
No 29
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.76 E-value=0.00024 Score=69.63 Aligned_cols=72 Identities=11% Similarity=0.028 Sum_probs=54.0
Q ss_pred CCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCC-ceEEEEeeEec
Q 018853 213 SDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (349)
Q Consensus 213 ~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~ 288 (349)
...|||.+..++||+|.+|.++.+.|. +.++ ...+|+|+||.+.... ++-+|+.-.+ ...+ .+|++.++.|.
T Consensus 177 ~NtDGidi~~s~nV~I~n~~i~~gDDc-Iaik-sg~nI~i~n~~~~~gh-GisiGS~G~~-~~~~v~nV~v~n~~~~ 249 (362)
T 1czf_A 177 HNTDAFDVGNSVGVNIIKPWVHNQDDC-LAVN-SGENIWFTGGTCIGGH-GLSIGSVGDR-SNNVVKNVTIEHSTVS 249 (362)
T ss_dssp CSCCSEEECSCEEEEEESCEEECSSCS-EEES-SEEEEEEESCEEESSC-CEEEEEECSS-SCCEEEEEEEEEEEEE
T ss_pred CCCCceeecCcceEEEEeeEEecCCCE-EEEe-CCeEEEEEEEEEeCCc-eeEEeecccc-CCCCEEEEEEEeeEEE
Confidence 357999999999999999999987665 4444 4599999999999743 5777763212 1122 57999999985
No 30
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.76 E-value=0.00027 Score=68.36 Aligned_cols=71 Identities=18% Similarity=0.156 Sum_probs=50.6
Q ss_pred CCCCcEEeeCCceEEEEeeEEecCCCCeeeeee-------CCceEEEEcceeccCCceeeccCCCCccCCCC--ceEEEE
Q 018853 213 SDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIM-------GSTGITISNNYFSHHNEVMLLGHNDKYALDMG--MQVTIA 283 (349)
Q Consensus 213 ~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~-------gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g--~~VTi~ 283 (349)
.+.|+|.|..++||+|.+|.+..+. | +.+.. +..+|+|+||.|.+...+.-+-..+. ..| .+|+|.
T Consensus 173 ~gDDciaiksg~nI~i~n~~~~~gh-G-isiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g---~~G~v~nI~~~ 247 (336)
T 1nhc_A 173 NQDDCIAINSGESISFTGGTCSGGH-G-LSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYK---ETGDVSEITYS 247 (336)
T ss_dssp SSSEEEEESSEEEEEEESCEEESSS-E-EEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT---CCCEEEEEEEE
T ss_pred cCCCEEEEeCCeEEEEEeEEEECCc-C-ceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECC---CCCEEeeeEEe
Confidence 3579999998999999999999865 5 44422 35799999999998766554543211 122 468888
Q ss_pred eeEec
Q 018853 284 FNHFG 288 (349)
Q Consensus 284 hN~F~ 288 (349)
+..+.
T Consensus 248 ni~~~ 252 (336)
T 1nhc_A 248 NIQLS 252 (336)
T ss_dssp EEEEE
T ss_pred eEEee
Confidence 77773
No 31
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.70 E-value=0.00043 Score=67.41 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=70.4
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCcc-ccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEE
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTM-IASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITI 252 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~-v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITI 252 (349)
+.+..++||.|+|++|.... ++.. ..+ + +.-.....|||.+.+++||+|.+|.++...|. +.++ .+.+|+|
T Consensus 130 i~i~~~~nv~i~~~~I~~~~--~~~~~~~~--~--~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDc-Iaik-sg~nI~i 201 (349)
T 1hg8_A 130 FDITGSSQLTISGLILDNRA--GDKPNAKS--G--SLPAAHNTDGFDISSSDHVTLDNNHVYNQDDC-VAVT-SGTNIVV 201 (349)
T ss_dssp EEEESCEEEEEEEEEEECGG--GSSCCTTT--T--TSCSCCSCCSEEEESCEEEEEEEEEEECSSCS-EEES-SEEEEEE
T ss_pred EEEeccCCEEEEEEEEECCC--Cccccccc--c--ccccCCCCCeEEEccccEEEEEeeEEecCCCe-EEee-CCeEEEE
Confidence 66778999999999998521 1000 000 0 00002357999999999999999999976554 5554 4699999
Q ss_pred EcceeccCCceeeccCCCCccCCCC-ceEEEEeeEec
Q 018853 253 SNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFG 288 (349)
Q Consensus 253 Snn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~ 288 (349)
+||.+..-. ++-+|+.-.+ ...+ .+|++.++.|.
T Consensus 202 ~n~~~~~gh-GisiGS~G~~-~~~~v~nV~v~n~~~~ 236 (349)
T 1hg8_A 202 SNMYCSGGH-GLSIGSVGGK-SDNVVDGVQFLSSQVV 236 (349)
T ss_dssp EEEEEESSC-CEEEEEESSS-SCCEEEEEEEEEEEEE
T ss_pred EeEEEeCCc-ceEEcccccc-ccCCEEEEEEEEEEEE
Confidence 999998632 4666764222 1122 57999999985
No 32
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.69 E-value=0.0003 Score=68.87 Aligned_cols=85 Identities=13% Similarity=0.180 Sum_probs=69.4
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecC---------CCCeeee
Q 018853 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC---------TDGLIDA 243 (349)
Q Consensus 173 ~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~---------~Dglid~ 243 (349)
.|.+.+++||.|++|++++. | .-+|.+. ++||.|++|.+... .|| +|+
T Consensus 128 ~i~~~~~~nv~i~~iti~ns-----------p----------~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDG-idi 184 (362)
T 1czf_A 128 FFYAHGLDSSSITGLNIKNT-----------P----------LMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDA-FDV 184 (362)
T ss_dssp CEEEEEEETEEEESCEEECC-----------S----------SCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCS-EEE
T ss_pred EEEEeecccEEEEEEEEecC-----------C----------ccEEEEe-eCCEEEEEEEEECCccccccCCCCCc-eee
Confidence 47888999999999999864 1 2369999 99999999999862 577 464
Q ss_pred eeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecC
Q 018853 244 IMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGV 289 (349)
Q Consensus 244 ~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~ 289 (349)
..+++|+|++|.|...+.+.-++++ .+|++.++++..
T Consensus 185 -~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~ 221 (362)
T 1czf_A 185 -GNSVGVNIIKPWVHNQDDCLAVNSG--------ENIWFTGGTCIG 221 (362)
T ss_dssp -CSCEEEEEESCEEECSSCSEEESSE--------EEEEEESCEEES
T ss_pred -cCcceEEEEeeEEecCCCEEEEeCC--------eEEEEEEEEEeC
Confidence 4799999999999988877777653 489999999864
No 33
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.68 E-value=0.00069 Score=65.93 Aligned_cols=106 Identities=15% Similarity=0.207 Sum_probs=77.5
Q ss_pred EEEE-e-eeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecC--------------
Q 018853 173 CLTL-Q-YVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYC-------------- 236 (349)
Q Consensus 173 ~l~i-~-~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~-------------- 236 (349)
.|++ . .++||.|++|+|++. ...+|.+.++++|.|+++++...
T Consensus 104 ~i~~~~~~~~nv~I~giti~ns---------------------p~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~ 162 (349)
T 1hg8_A 104 HFIVVQKTTGNSKITNLNIQNW---------------------PVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPA 162 (349)
T ss_dssp EEEEEEEEESSEEEESCEEECC---------------------SSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCS
T ss_pred EEEEeecCcCcEEEEEEEEEcC---------------------CCceEEEeccCCEEEEEEEEECCCCcccccccccccc
Confidence 4777 6 677999999999963 13579999999999999999863
Q ss_pred ---CCCeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcCccc------CCC---eEE
Q 018853 237 ---TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRC------RRG---YIH 304 (349)
Q Consensus 237 ---~Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~------R~G---~~H 304 (349)
.|| +|+ ..+++|+|++|.|...+.+.-++++ .+|++.+|++..+. . . .+ ..+ .++
T Consensus 163 ~~NtDG-id~-~~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~gh-G-i-siGS~G~~~~~~v~nV~ 229 (349)
T 1hg8_A 163 AHNTDG-FDI-SSSDHVTLDNNHVYNQDDCVAVTSG--------TNIVVSNMYCSGGH-G-L-SIGSVGGKSDNVVDGVQ 229 (349)
T ss_dssp CCSCCS-EEE-ESCEEEEEEEEEEECSSCSEEESSE--------EEEEEEEEEEESSC-C-E-EEEEESSSSCCEEEEEE
T ss_pred CCCCCe-EEE-ccccEEEEEeeEEecCCCeEEeeCC--------eEEEEEeEEEeCCc-c-e-EEccccccccCCEEEEE
Confidence 455 353 5799999999999987766666543 47999999886421 1 1 11 111 567
Q ss_pred EEcceEeC
Q 018853 305 VVNNDFTS 312 (349)
Q Consensus 305 vvNN~~~~ 312 (349)
|.|+.+.+
T Consensus 230 v~n~~~~~ 237 (349)
T 1hg8_A 230 FLSSQVVN 237 (349)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEC
Confidence 77777765
No 34
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=97.67 E-value=0.00027 Score=73.47 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=66.4
Q ss_pred eeccEEEEeeEEEeeccCCCccccCCCCcc-----c---cC-CCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCc
Q 018853 178 YVSHVIIHNVHIHHCKPSGNTMIASSPTHV-----G---YR-GKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGST 248 (349)
Q Consensus 178 ~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~-----G---~r-~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~ 248 (349)
+++||.|++|++++. |...-.+..+. ++ + .. .....|||.+. +||.|.+|.|..+.| .|.++ +.
T Consensus 331 ~c~NV~I~Giti~NS-p~w~i~~~~c~-nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~gDD-cIaIk--s~ 403 (574)
T 1ogo_X 331 GGQTWYCVGPTINAP-PFNTMDFNGNS-GISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVNDD-AIKIY--YS 403 (574)
T ss_dssp SSEEEEEESCEEECC-SSCSEEECSSS-CEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEESSC-SEECC--ST
T ss_pred CceeEEEECeEEECC-CCcEEeecCCC-ChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECCCC-EEEEC--Cc
Confidence 688999999999874 22221111111 11 0 00 01238999998 999999999999988 44443 49
Q ss_pred eEEEEcceecc-CCce-eeccCCCCccCCCC-ceEEEEeeEec
Q 018853 249 GITISNNYFSH-HNEV-MLLGHNDKYALDMG-MQVTIAFNHFG 288 (349)
Q Consensus 249 ~ITISnn~f~~-h~k~-~L~G~sd~~~~d~g-~~VTi~hN~F~ 288 (349)
+|+|+||.+.. |..+ .-+|+.. .. .+|++.++.+.
T Consensus 404 NI~I~nc~i~~g~g~g~IsIGS~~-----g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 404 GASVSRATIWKCHNDPIIQMGWTS-----RDISGVTIDTLNVI 441 (574)
T ss_dssp TCEEEEEEEEECSSSCSEECCSSC-----CCEEEEEEEEEEEE
T ss_pred cEEEEeEEEECCCCCceEEEcCCC-----CcEEEEEEEeEEEE
Confidence 99999999874 6555 7788731 22 47888888885
No 35
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.58 E-value=0.0062 Score=63.43 Aligned_cols=116 Identities=16% Similarity=0.142 Sum_probs=78.7
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEec----CCCCeeeeeeCCce
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSY----CTDGLIDAIMGSTG 249 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~----~~Dglid~~~gs~~ 249 (349)
|.+.+++||.|++|+|++.. .-+|.+.+++||.|+++.+.. -.||. |+ ..+++
T Consensus 334 i~~~~~~nv~I~giti~ns~---------------------~~~i~~~~~~nv~i~~v~i~~~~~~NtDGi-di-~~s~n 390 (608)
T 2uvf_A 334 MTLRGVENVYLAGFTVRNPA---------------------FHGIMNLENHNVVANGLIHQTYDANNGDGI-EF-GNSQN 390 (608)
T ss_dssp EEEESEEEEEEESCEEECCS---------------------SCSEEEESCEEEEEESCEEECTTCTTCCSE-EE-ESCEE
T ss_pred EEEEeeeeEEEeCcEEecCC---------------------CCEEEEecCCCEEEeeEEEcCCCCCCCCeE-Ee-cCCce
Confidence 66677889999999988631 236888899999999999864 36774 54 58999
Q ss_pred EEEEcceeccCCceeeccCC-CCccCCC-C-ceEEEEeeEecCCCcCcC---cccCCC--eEEEEcceEeCC
Q 018853 250 ITISNNYFSHHNEVMLLGHN-DKYALDM-G-MQVTIAFNHFGVALVQRM---PRCRRG--YIHVVNNDFTSW 313 (349)
Q Consensus 250 ITISnn~f~~h~k~~L~G~s-d~~~~d~-g-~~VTi~hN~F~~n~~~R~---Pr~R~G--~~HvvNN~~~~~ 313 (349)
|+|++|.|...+.+.-+.+. +.+..+. . .+|++.+|++..+. .-. -....+ .++|.||.+.+-
T Consensus 391 V~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~gh-g~~~iGS~~~~~v~nI~v~n~~~~~t 461 (608)
T 2uvf_A 391 VMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGH-GAIVTGSHTGAWIEDILAENNVMYLT 461 (608)
T ss_dssp EEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSS-CSEEEESCCTTCEEEEEEESCEEESC
T ss_pred EEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCC-CeEEEcccCCCCEEEEEEEeEEEECC
Confidence 99999999988776555322 2221111 1 47999999996431 110 001112 589999999875
No 36
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.49 E-value=0.0044 Score=60.45 Aligned_cols=108 Identities=19% Similarity=0.177 Sum_probs=70.6
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcE-Ee-eCCceEEEEeeEEecCCCCeeeeee------
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGI-SI-FGSQKIWVDHCSLSYCTDGLIDAIM------ 245 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaI-si-~gs~nVWIDHcS~s~~~Dglid~~~------ 245 (349)
|.+.+++||+|.+..|..+ .|++ .+ .++++|=|-+|.|+....+++--..
T Consensus 153 I~i~~s~nVwIDHcs~s~~----------------------~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d 210 (346)
T 1pxz_A 153 ITMRNVTNAWIDHNSLSDC----------------------SDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDD 210 (346)
T ss_dssp EEEESCEEEEEESCEEECC----------------------SSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGG
T ss_pred EEEecCceEEEEeeEEecC----------------------CCCcEeeccCcceEEEEeeEEecCCceeEECCCCccccC
Confidence 8888899999999999853 3565 56 4789999999999876544441111
Q ss_pred CCceEEEEcceeccCCcee--eccCCCCccCCCCceEEEEeeEecCCCcCcCcccC-CCeEEEEcceEeCC
Q 018853 246 GSTGITISNNYFSHHNEVM--LLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-RGYIHVVNNDFTSW 313 (349)
Q Consensus 246 gs~~ITISnn~f~~h~k~~--L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R-~G~~HvvNN~~~~~ 313 (349)
....||+.+|+|.+|.... .+. ..++.+.+|+|.+ ...+.=..+ .+.+-+.||+|..-
T Consensus 211 ~~~~vT~~~N~f~~~~~~R~Pr~r---------~g~~hv~NN~~~~-~~~~~i~~~~~~~i~~egN~F~~~ 271 (346)
T 1pxz_A 211 KSMKVTVAFNQFGPNAGQRMPRAR---------YGLVHVANNNYDP-WNIYAIGGSSNPTILSEGNSFTAP 271 (346)
T ss_dssp GGCEEEEESCEECSSEEECTTEEE---------SSEEEEESCEECC-CSSCSEEEESCCEEEEESCEEECC
T ss_pred CceEEEEEeeEEeCCccccCccEe---------cceEEEEeeEEEc-ccceEEeccCCceEEEECCEEECC
Confidence 1138999999994332211 111 1368899999963 332221111 24788999999864
No 37
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=97.38 E-value=0.00065 Score=65.84 Aligned_cols=124 Identities=15% Similarity=0.199 Sum_probs=78.6
Q ss_pred EEEeeecc-EEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEE
Q 018853 174 LTLQYVSH-VIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITI 252 (349)
Q Consensus 174 l~i~~a~N-VIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITI 252 (349)
+.+..++| |.|+|++|.... ++. .......|||.+ .++||+|.+|.++...| .+.++.+ .+|+|
T Consensus 122 i~i~~~~n~v~i~~v~I~~~~--~d~----------~~~~~NtDGidi-~s~nV~I~n~~i~~gDD-cIaiksg-~nI~i 186 (335)
T 1k5c_A 122 ISVGPTDAHLTLDGITVDDFA--GDT----------KNLGHNTDGFDV-SANNVTIQNCIVKNQDD-CIAINDG-NNIRF 186 (335)
T ss_dssp EEEEEEEEEEEEESCEEECGG--GGG----------GGCCCSCCSEEE-ECSSEEEESCEEESSSC-SEEEEEE-EEEEE
T ss_pred EEEEccCCeEEEEEEEEECCC--Ccc----------cccCCCCCeEcc-cCCeEEEEeeEEEcCCC-EEEeeCC-eeEEE
Confidence 45556888 888888887421 100 000235799999 99999999999996645 5666554 89999
Q ss_pred EcceeccCCceeeccCCCCccCCCC-ceEEEEeeEecCCCcCcCcccC---CCe-EEEEcceEeCCcceEE
Q 018853 253 SNNYFSHHNEVMLLGHNDKYALDMG-MQVTIAFNHFGVALVQRMPRCR---RGY-IHVVNNDFTSWEMYAI 318 (349)
Q Consensus 253 Snn~f~~h~k~~L~G~sd~~~~d~g-~~VTi~hN~F~~n~~~R~Pr~R---~G~-~HvvNN~~~~~~~yai 318 (349)
+||.+.... ++-+|+... ..+ .+|++.++.|. + .++.-|++ .+. -.+-|=.|.|..|..+
T Consensus 187 ~n~~~~~gh-GisIGS~g~---~~~v~nV~v~n~~~~-~-t~~girIKt~~g~~~G~v~nI~f~ni~~~~v 251 (335)
T 1k5c_A 187 ENNQCSGGH-GISIGSIAT---GKHVSNVVIKGNTVT-R-SMYGVRIKAQRTATSASVSGVTYDANTISGI 251 (335)
T ss_dssp ESCEEESSC-CEEEEEECT---TCEEEEEEEESCEEE-E-EEEEEEEEEETTCCSCEEEEEEEESCEEEEE
T ss_pred EEEEEECCc-cCeEeeccC---CCCEEEEEEEeeEEE-C-CCceEEEEEeCCCCcceEeeeEEEEEEEEcc
Confidence 999999743 467776421 122 47999999885 3 23333332 112 3345555556655443
No 38
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.34 E-value=0.0035 Score=60.52 Aligned_cols=113 Identities=13% Similarity=0.167 Sum_probs=75.9
Q ss_pred hHHHHhhcC----CCeEEEEecCeEEEecceEEe---cCCceEEeeCc-eEEEEecc------------EEEEeeeccEE
Q 018853 124 TLRHAVIQT----EPIWITFASNMLIKLKHELII---NSYKTIDGRGA-NVEITGNG------------CLTLQYVSHVI 183 (349)
Q Consensus 124 tLr~av~~~----~P~~IvF~~~g~I~L~~~L~i---~snkTI~G~ga-~i~I~G~g------------~l~i~~a~NVI 183 (349)
|+.+||.+- ..+++|+=..|+-+ +.|.| .+++||.|.|. ...|.+.. .+.+ .+++++
T Consensus 21 TIq~AI~aap~~~~~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f~ 97 (319)
T 1gq8_A 21 TVSEAVAAAPEDSKTRYVIRIKAGVYR--ENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAA-VGAGFL 97 (319)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEEE--CCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSEEE-CSTTCE
T ss_pred CHHHHHHhccccCCceEEEEEcCCeEe--eeeeccCCCccEEEEEcCCCccEEEecccccCCCCccceEEEEE-ECCCEE
Confidence 899999752 22445554566654 66777 46899999985 46677532 5777 599999
Q ss_pred EEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEEEcceec
Q 018853 184 IHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFS 258 (349)
Q Consensus 184 IrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITISnn~f~ 258 (349)
++||.|++... . .....-||.+ .++++.+.+|.|....|.+.+ + .....+.+|++.
T Consensus 98 ~~nlt~~Nt~g--------------~-~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~--~-~~r~~~~~c~I~ 153 (319)
T 1gq8_A 98 ARDITFQNTAG--------------A-AKHQAVALRV-GSDLSAFYRCDILAYQDSLYV--H-SNRQFFINCFIA 153 (319)
T ss_dssp EEEEEEEECCC--------------G-GGCCCCSEEE-CCTTEEEEEEEEECSTTCEEE--C-SSEEEEESCEEE
T ss_pred EEEeEeEccCC--------------C-cCCceEEEEe-cCCcEEEEEeEECccceeeee--c-CccEEEEecEEE
Confidence 99999998521 0 0123356776 588899999999998887764 1 122355555554
No 39
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.34 E-value=0.0074 Score=59.19 Aligned_cols=110 Identities=15% Similarity=0.283 Sum_probs=69.6
Q ss_pred CCcEEee-CCceEEEEeeEEecC-------CCCeeeeeeCCceEEEEcceeccCCceee-ccCCCCccCCCCceEEEEee
Q 018853 215 GDGISIF-GSQKIWVDHCSLSYC-------TDGLIDAIMGSTGITISNNYFSHHNEVML-LGHNDKYALDMGMQVTIAFN 285 (349)
Q Consensus 215 gDaIsi~-gs~nVWIDHcS~s~~-------~Dglid~~~gs~~ITISnn~f~~h~k~~L-~G~sd~~~~d~g~~VTi~hN 285 (349)
+.+|.|. +++||+|.++.|..+ .|++- ..++++|-|-+|.|+.-...++ .+.. ....||+.+|
T Consensus 123 G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~--i~~s~nvwIDHcs~s~~~d~~~~~~~~------~s~~vTISnn 194 (359)
T 1qcx_A 123 GKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAIT--VDDSDLVWIDHVTTARIGRQHIVLGTS------ADNRVTISYS 194 (359)
T ss_dssp SCCEEEETTCCCEEEESCEEEEECTTEETSCCSEE--EESCCCEEEESCEEEEESSCSEEECSS------CCEEEEEESC
T ss_pred cceEEEecCCCCEEEeCcEEEecCCcccccCceeE--ecCCceEEEEeeEeeccCcCceeeccc------ccccEEEECc
Confidence 4579998 899999999999864 35442 3478899899998885322222 1211 1148999999
Q ss_pred EecCCCcCcCcccC---------CC---eEEEEcceEeCCcc--eEEecCCCceEEEEcceEeC
Q 018853 286 HFGVALVQRMPRCR---------RG---YIHVVNNDFTSWEM--YAIGGSANPTINSQGNRYTA 335 (349)
Q Consensus 286 ~F~~n~~~R~Pr~R---------~G---~~HvvNN~~~~~~~--yaigg~~~~~i~~egN~F~~ 335 (349)
+|.+.. ....++. .| .+=+-+|+|.+-.. --+. .+..+.+.+|||..
T Consensus 195 ~f~~~~-~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r--~~~~~hv~NN~~~n 255 (359)
T 1qcx_A 195 LIDGRS-DYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ--GNTLLHAVNNLFHN 255 (359)
T ss_dssp EEECBC-SSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC--SSEEEEEESCEEEE
T ss_pred EecCCc-cccccCcccccceeEEecCCCCeehcccEeccCcccCceec--CCceEEEEccEEEC
Confidence 997432 1111121 12 56678888876532 2222 13458889999875
No 40
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=97.33 E-value=0.0022 Score=64.96 Aligned_cols=123 Identities=15% Similarity=0.082 Sum_probs=76.5
Q ss_pred CCceEEeeCceEEEEecc-------EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEE
Q 018853 155 SYKTIDGRGANVEITGNG-------CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIW 227 (349)
Q Consensus 155 snkTI~G~ga~i~I~G~g-------~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVW 227 (349)
.|++|.|.|....|.|.| .|.+.+++||.|++|+|.+.. .+..+ ..++. .+.|||.+ .++||+
T Consensus 109 ~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w-----~ih~s-~~V~i---~NtDGi~i-~s~nV~ 178 (464)
T 1h80_A 109 RNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK-----TIFAS-ILVDV---TERNGRLH-WSRNGI 178 (464)
T ss_dssp EEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS-----CBSCS-EEECE---EEETTEEE-EEEEEE
T ss_pred cceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc-----eEeec-eeeee---ecCCCcee-eccCEE
Confidence 456666665434444432 367788999999999998732 11110 11111 24588887 799999
Q ss_pred EEeeEEecCCCCee-eeeeCCceEEEEcceeccCCceeeccCCCCc--cCCCC--ceEEEEeeEec
Q 018853 228 VDHCSLSYCTDGLI-DAIMGSTGITISNNYFSHHNEVMLLGHNDKY--ALDMG--MQVTIAFNHFG 288 (349)
Q Consensus 228 IDHcS~s~~~Dgli-d~~~gs~~ITISnn~f~~h~k~~L~G~sd~~--~~d~g--~~VTi~hN~F~ 288 (349)
|.+|.+....|+.- ....++.+|+|+||.|.. ..++-+.+.+.. ....+ .+|+|.++.|.
T Consensus 179 I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~ 243 (464)
T 1h80_A 179 IERIKQNNALFGYGLIQTYGADNILFRNLHSEG-GIALRMETDNLLMKNYKQGGIRNIFADNIRCS 243 (464)
T ss_dssp EEEEEEESCCTTCEEEEESEEEEEEEEEEEEES-SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEE
T ss_pred EeceEEecCCCeEEecccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccCCCCcEEEEEEEeEEEE
Confidence 99999999866441 124578999999999887 333222211100 00112 47899999885
No 41
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=97.25 E-value=0.0039 Score=60.18 Aligned_cols=100 Identities=20% Similarity=0.322 Sum_probs=70.0
Q ss_pred hHHHHhhcC----CCeEEEEecCeEEEecceEEe---cCCceEEeeCc-eEEEEecc------------EEEEeeeccEE
Q 018853 124 TLRHAVIQT----EPIWITFASNMLIKLKHELII---NSYKTIDGRGA-NVEITGNG------------CLTLQYVSHVI 183 (349)
Q Consensus 124 tLr~av~~~----~P~~IvF~~~g~I~L~~~L~i---~snkTI~G~ga-~i~I~G~g------------~l~i~~a~NVI 183 (349)
|+.+||.+- ..+++|+=..|+-+ +.|.| .+++||.|.|. ...|.+.. .+.+ .+++++
T Consensus 17 TIq~AI~aap~~~~~~~~I~I~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f~ 93 (317)
T 1xg2_A 17 TLAEAVAAAPDKSKTRYVIYVKRGTYK--ENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAA-VGQGFI 93 (317)
T ss_dssp SHHHHHHHSCSSCSSCEEEEECSEEEE--CCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCCSGGGCSEEE-CSTTCE
T ss_pred cHHHHHhhcccCCCceEEEEEcCCEEe--eeeecCCCCCcEEEEEcCCCCcEEEecccccCCCcccceeEEEE-ECCCEE
Confidence 799998652 22444544566653 66777 47899999986 46677532 5777 699999
Q ss_pred EEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeee
Q 018853 184 IHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLID 242 (349)
Q Consensus 184 IrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid 242 (349)
++||+|++.. + . .....-||.+ .++++.+.+|.|....|.+.+
T Consensus 94 ~~~lt~~Nt~--g------------~-~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~ 136 (317)
T 1xg2_A 94 LQDICIQNTA--G------------P-AKDQAVALRV-GADMSVINRCRIDAYQDTLYA 136 (317)
T ss_dssp EESCEEEECC--C------------G-GGCCCCSEEE-CCTTEEEESCEEECSTTCEEE
T ss_pred EEEeEEeccc--C------------C-ccCceEEEEE-eCCcEEEEEeEeCccccceee
Confidence 9999999852 1 0 0123356776 578899999999988887664
No 42
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.19 E-value=0.02 Score=55.86 Aligned_cols=137 Identities=14% Similarity=0.113 Sum_probs=86.4
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCc-EEee-CCceEEEEeeEEecCCCCeeeeeeC----
Q 018853 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMG---- 246 (349)
Q Consensus 173 ~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDa-Isi~-gs~nVWIDHcS~s~~~Dglid~~~g---- 246 (349)
.|.+.+++||+|.+..|..+ .|+ |.+. ++++|=|-+|-|....-.++--...
T Consensus 118 aI~i~~s~nVWIDHcs~s~~----------------------~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~ 175 (340)
T 3zsc_A 118 YINVENSHHIWIDHITFVNG----------------------NDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDP 175 (340)
T ss_dssp SEEEESCEEEEEESCEEESC----------------------SSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCH
T ss_pred eEEEecCCcEEEEeeeeccC----------------------CccceEEecCCceEEEECcEeccCceeeEeCcCCCCcc
Confidence 37888899999999999853 233 6665 6889999999998765554421111
Q ss_pred -----CceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCC---------CcCcCcccC-CCeEEEEcceEe
Q 018853 247 -----STGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVA---------LVQRMPRCR-RGYIHVVNNDFT 311 (349)
Q Consensus 247 -----s~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n---------~~~R~Pr~R-~G~~HvvNN~~~ 311 (349)
...||+-+|+|.++.. ... .-+.-++-+.+|+|.+. .....-..+ .+.+-+-||||.
T Consensus 176 ~~d~g~~~vT~hhN~f~~~~~-----R~P---r~r~G~~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~a~i~~E~N~F~ 247 (340)
T 3zsc_A 176 EQAGQAYKVTYHHNYFKNLIQ-----RMP---RIRFGMAHVFNNFYSMGLRTGVSGNVFPIYGVASAMGAKVHVEGNYFM 247 (340)
T ss_dssp HHHHHSCEEEEESCEEESCCB-----CTT---EEESSEEEEESCEEECCCCCSCSSCCSCCEEEEEETTCEEEEESCEEE
T ss_pred ccccCCcEEEEECeEecCCCC-----CCC---cccCCeEEEEccEEECCccccccccceeeeeEecCCCCEEEEECcEEE
Confidence 1389999999975421 000 01112577889999630 111111112 358999999999
Q ss_pred CCcc--------eEE---ecCCCceEEEEc----ceEeCCCCC
Q 018853 312 SWEM--------YAI---GGSANPTINSQG----NRYTAPPDD 339 (349)
Q Consensus 312 ~~~~--------yai---gg~~~~~i~~eg----N~F~~~~~~ 339 (349)
+... +.+ .++....+...+ |.|.....+
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~G~~~~~~~~~~n~~~~~~~~ 290 (340)
T 3zsc_A 248 GYGAVMAEAGIAFLPTRIMGPVEGYLTLGEGDAKNEFYYCKEP 290 (340)
T ss_dssp CSCHHHHHTTCCBEEEEECTTTBCEEEECCGGGCCEEESBCCC
T ss_pred CCCcccccccccccccccCCCCceEEEecCcccceeeccCCCC
Confidence 8643 132 234456778888 999876543
No 43
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.17 E-value=0.0055 Score=61.66 Aligned_cols=118 Identities=13% Similarity=0.119 Sum_probs=81.2
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEec---CCCCeeeeeeCCce
Q 018853 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSY---CTDGLIDAIMGSTG 249 (349)
Q Consensus 173 ~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~---~~Dglid~~~gs~~ 249 (349)
.|.+.+++||.|++|++++. | .-++.+.+++||.|+++++.. -.||.- ...+++
T Consensus 192 ~i~~~~~~nv~i~giti~ns-----------p----------~~~i~~~~~~nv~i~~v~I~~~~~NtDGid--i~~s~n 248 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINS-----------P----------MWCIHPVLSENVIIRNIEISSTGPNNDGID--PESCKY 248 (448)
T ss_dssp SEEEESCEEEEEESCEEESC-----------S----------SCSEEEESCEEEEEESCEEEECSTTCCSBC--CBSCEE
T ss_pred EEEEEcccceEEEeeEEEeC-----------C----------CceEeeeccCCEEEEeEEEeeccCCCcccc--ccCCcC
Confidence 47888999999999999964 1 136888999999999999986 578763 456899
Q ss_pred EEEEcceeccCCceeeccCCCC-ccC--CC-CceEEEEeeEe--cCCC--cCcCcccCCC--eEEEEcceEeCC
Q 018853 250 ITISNNYFSHHNEVMLLGHNDK-YAL--DM-GMQVTIAFNHF--GVAL--VQRMPRCRRG--YIHVVNNDFTSW 313 (349)
Q Consensus 250 ITISnn~f~~h~k~~L~G~sd~-~~~--d~-g~~VTi~hN~F--~~n~--~~R~Pr~R~G--~~HvvNN~~~~~ 313 (349)
|+|++|.|...+.+.-+.+..+ +.. .. -.+|++.++++ ..+. ..=.-....+ .++|.|+.+.+-
T Consensus 249 V~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t 322 (448)
T 3jur_A 249 MLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNV 322 (448)
T ss_dssp EEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESC
T ss_pred EEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecc
Confidence 9999999998887766654311 100 01 14799999988 3221 1000001112 678888888754
No 44
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.06 E-value=0.018 Score=61.53 Aligned_cols=137 Identities=15% Similarity=-0.010 Sum_probs=84.3
Q ss_pred eccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCC----CCeeeeeeCCceEEEEc
Q 018853 179 VSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCT----DGLIDAIMGSTGITISN 254 (349)
Q Consensus 179 a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~----Dglid~~~gs~~ITISn 254 (349)
++||.|+|-+|++ .++|+|.|.+++||+|.+|.+.... ..-+.+..++.+|||+|
T Consensus 182 S~NV~I~Nc~I~n---------------------tGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~N 240 (772)
T 3gqn_A 182 SENIWIENCEATG---------------------FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSN 240 (772)
T ss_dssp CEEEEEESCEEES---------------------CSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEE
T ss_pred cceEEEEeeEEEe---------------------cCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEc
Confidence 7888888888874 2469999999999999999995431 22344445678999999
Q ss_pred ceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcCcc-----------c-CCCeEEEEcceEeCCc--------
Q 018853 255 NYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPR-----------C-RRGYIHVVNNDFTSWE-------- 314 (349)
Q Consensus 255 n~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr-----------~-R~G~~HvvNN~~~~~~-------- 314 (349)
|.|.+...+.-|-+...-. ...+|.+.+|+..++..+-..| - -...+.+.|..-....
T Consensus 241 c~~~nT~nGIRIKt~~~gg--~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~ 318 (772)
T 3gqn_A 241 NRSKGCYGGIEIKAHGDAP--AAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDN 318 (772)
T ss_dssp EEEESSSEEEEECCCTTSC--CCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHH
T ss_pred eEEECCCcEEEEEEeCCCC--ccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeC
Confidence 9999877665443321111 1246777777765432211111 1 1223555555544332
Q ss_pred --ceEEecCCCceEEEEcceEeCCCC
Q 018853 315 --MYAIGGSANPTINSQGNRYTAPPD 338 (349)
Q Consensus 315 --~yaigg~~~~~i~~egN~F~~~~~ 338 (349)
--++-.++-..+.+.++.++.-++
T Consensus 319 ~~praL~vsay~~v~i~~~~~igd~~ 344 (772)
T 3gqn_A 319 ATPRVLAVSAYYGVVINGLTGYTDDP 344 (772)
T ss_dssp CCCEEEEEESCEEEEEEEEEEECSCT
T ss_pred CCcceEEEEcCCCcEecCceeccCcc
Confidence 124444556678888888875444
No 45
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=97.06 E-value=0.0027 Score=65.55 Aligned_cols=102 Identities=9% Similarity=0.033 Sum_probs=65.2
Q ss_pred eeeccEEEEeeEEEeeccCCCccccCCC-Cc--c---c---cC-CCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeC
Q 018853 177 QYVSHVIIHNVHIHHCKPSGNTMIASSP-TH--V---G---YR-GKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMG 246 (349)
Q Consensus 177 ~~a~NVIIrnL~I~~~~p~~~~~v~~~~-~~--~---G---~r-~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~g 246 (349)
.+++||.|++|++++. |...-.+.... .+ + + .. .....|||.+. +||.|.+|.|....| .+.++
T Consensus 290 ~~c~nV~I~Giti~Ns-p~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~gDD-cIaIk-- 363 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAP-PFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTDDD-GLKMY-- 363 (549)
T ss_dssp SSCEEEEEESCEEECC-SSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEESSC-CEECC--
T ss_pred CCceEEEEECcEEECC-CceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCCCC-EEEEC--
Confidence 6778888888888874 11111101000 01 0 0 00 01246999988 999999999999877 44443
Q ss_pred CceEEEEcceec-cCCce-eeccCCCCccCCCCceEEEEeeEec
Q 018853 247 STGITISNNYFS-HHNEV-MLLGHNDKYALDMGMQVTIAFNHFG 288 (349)
Q Consensus 247 s~~ITISnn~f~-~h~k~-~L~G~sd~~~~d~g~~VTi~hN~F~ 288 (349)
+.+|+|+||.+. .|..+ .-+|++. ..-.+|++.++.+.
T Consensus 364 s~NI~I~n~~~~~~~g~~~IsiGs~~----~~V~NV~v~n~~i~ 403 (549)
T 1x0c_A 364 YSNVTARNIVMWKESVAPVVEFGWTP----RNTENVLFDNVDVI 403 (549)
T ss_dssp SSSEEEEEEEEEECSSSCSEECCBSC----CCEEEEEEEEEEEE
T ss_pred CCCEEEEeeEEEcCCCCceEEECCCC----CcEEEEEEEeeEEE
Confidence 499999999997 35545 6678731 11147888888885
No 46
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.04 E-value=0.015 Score=56.45 Aligned_cols=141 Identities=19% Similarity=0.214 Sum_probs=86.1
Q ss_pred EEEee-eccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCc-EEee-CCceEEEEeeEEecCCCCeeeeeeCC---
Q 018853 174 LTLQY-VSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMGS--- 247 (349)
Q Consensus 174 l~i~~-a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDa-Isi~-gs~nVWIDHcS~s~~~Dglid~~~gs--- 247 (349)
|.+.. ++||+|.+..|....++. .+....|+ +.+. ++++|=|-+|-|....-+++ ...+
T Consensus 123 I~i~~~s~nVWIDH~s~s~~~~g~-------------~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~~L--iG~sd~~ 187 (326)
T 3vmv_A 123 IEVTDDSKNVWIDHNEFYSEFPGN-------------GDSDYYDGLVDMKRNAEYITVSWNKFENHWKTML--VGHTDNA 187 (326)
T ss_dssp EEEETTCEEEEEESCEEECCSSTT-------------SCTTSSCCSEEECTTCEEEEEESCEEEEEEECEE--ECSSSCG
T ss_pred EEEecCCCcEEEEeeEEeccccCC-------------cCccccCcceEecCCCceEEEEceEEecCceEEE--ECCCCCC
Confidence 78876 899999999998653210 01112343 4564 57888888888886544444 2222
Q ss_pred ----ceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcCcccC-CCeEEEEcceEeCCc--------
Q 018853 248 ----TGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-RGYIHVVNNDFTSWE-------- 314 (349)
Q Consensus 248 ----~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R-~G~~HvvNN~~~~~~-------- 314 (349)
..||+-+|+|.+... -.. .-+.-++-+.+|+|. +...+.-..+ .+.+-+-||||.+-.
T Consensus 188 ~~~~~~vT~~~N~f~~~~~-----R~P---r~r~G~~Hv~NN~~~-n~~~~~~~~~~~a~v~~e~N~F~~~~~~~~~~~~ 258 (326)
T 3vmv_A 188 SLAPDKITYHHNYFNNLNS-----RVP---LIRYADVHMFNNYFK-DINDTAINSRVGARVFVENNYFDNVGSGQADPTT 258 (326)
T ss_dssp GGCCEEEEEESCEEEEEEE-----CTT---EEESCEEEEESCEEE-EESSCSEEEETTCEEEEESCEEEEESCCSBCTTT
T ss_pred cccCccEEEEeeEecCCcC-----cCC---cccCCcEEEEccEEE-CCCceEEeecCCcEEEEEceEEECCcCccccccc
Confidence 279999999975321 111 001125778899996 3333333333 358899999999761
Q ss_pred ---ceEE----ecCCCceEEEEcceEeCCCC
Q 018853 315 ---MYAI----GGSANPTINSQGNRYTAPPD 338 (349)
Q Consensus 315 ---~yai----gg~~~~~i~~egN~F~~~~~ 338 (349)
.-.+ +......+..++|.|.+...
T Consensus 259 ~~~~~~~~~~~~s~~~g~~~~~~n~~~n~~~ 289 (326)
T 3vmv_A 259 GFIKGPVGWFYGSPSTGYWNLRGNVFVNTPN 289 (326)
T ss_dssp CCBCSSEECCSCSSSBCEEEEESCEEESSCC
T ss_pred cccccceeeccCCCCceEEEEECCeEccCcC
Confidence 1111 23344567889999987643
No 47
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.02 E-value=0.017 Score=60.23 Aligned_cols=137 Identities=15% Similarity=0.006 Sum_probs=82.2
Q ss_pred eccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCC----CCeeeeeeCCceEEEEc
Q 018853 179 VSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCT----DGLIDAIMGSTGITISN 254 (349)
Q Consensus 179 a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~----Dglid~~~gs~~ITISn 254 (349)
++||.|+|-+|++ .++|+|.|.+++||+|.+|.+.... ..-+.+..++.+|||+|
T Consensus 182 S~NV~I~Nc~I~~---------------------tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~N 240 (609)
T 3gq8_A 182 SENIWIENCEATG---------------------FGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSN 240 (609)
T ss_dssp CEEEEEESCEEES---------------------CSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEES
T ss_pred ceeEEEEeeEEEe---------------------cCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEe
Confidence 7888888888873 2469999988999999999995431 22344445668999999
Q ss_pred ceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcC-----------cccC-CCeEEEEcceEeCCc--------
Q 018853 255 NYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRM-----------PRCR-RGYIHVVNNDFTSWE-------- 314 (349)
Q Consensus 255 n~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~-----------Pr~R-~G~~HvvNN~~~~~~-------- 314 (349)
|.|.+-..+.-+-..+... ....|.+.+|++.++...-. |... ...+.+.|..-....
T Consensus 241 c~i~nt~~GIrIKt~~~~~--~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~ 318 (609)
T 3gq8_A 241 NRSKGCYGGIEIKAHGDAP--AAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDN 318 (609)
T ss_dssp EEEESSSEEEEEEECTTSC--CCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHH
T ss_pred eEEECCCCEEEEEecCCCC--ccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeC
Confidence 9999876654443322111 12467777776644322111 2211 123555555554332
Q ss_pred --ceEEecCCCceEEEEcceEeCCCC
Q 018853 315 --MYAIGGSANPTINSQGNRYTAPPD 338 (349)
Q Consensus 315 --~yaigg~~~~~i~~egN~F~~~~~ 338 (349)
--++-.++-+.+.+.++.++.-|+
T Consensus 319 ~~~r~l~vs~~~~v~i~~~~~~~d~~ 344 (609)
T 3gq8_A 319 ATPRVLAVSAYYGVVINGLTGYTDDP 344 (609)
T ss_dssp CCCEEEEEESCEEEEEEEEEEECSCT
T ss_pred CCcceEEEEcCCCeEEcCceEccCCc
Confidence 123334455677777777775443
No 48
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=96.93 E-value=0.0053 Score=62.85 Aligned_cols=19 Identities=11% Similarity=-0.054 Sum_probs=14.2
Q ss_pred EEEeeeccEEEEeeEEEeec
Q 018853 174 LTLQYVSHVIIHNVHIHHCK 193 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~ 193 (349)
+.+. ++++.|+|.+|++..
T Consensus 121 iav~-G~~~~I~nn~I~~~~ 139 (506)
T 1dbg_A 121 VAIY-GSYNRITACVFDCFD 139 (506)
T ss_dssp EEEC-SSSCEEESCEEESCC
T ss_pred eEEe-cCCeEEEeeEEEcCC
Confidence 3443 589999999999763
No 49
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=96.89 E-value=0.003 Score=61.14 Aligned_cols=127 Identities=14% Similarity=0.141 Sum_probs=87.0
Q ss_pred eEEecC-CceEEeeCceE--------EEEeccEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEe
Q 018853 150 ELIINS-YKTIDGRGANV--------EITGNGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISI 220 (349)
Q Consensus 150 ~L~i~s-nkTI~G~ga~i--------~I~G~g~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi 220 (349)
.+.|.. .=||+|+|+.- .....-.|.+..++ |.|++|++++. ....|.+
T Consensus 67 ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~ns---------------------p~~~i~i 124 (335)
T 1k5c_A 67 GINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNS---------------------PAQAISV 124 (335)
T ss_dssp EEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESC---------------------SSCCEEE
T ss_pred CEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECC---------------------CcceEEE
Confidence 455544 45888887520 00011136777788 99999999963 1246999
Q ss_pred eCCce-EEEEeeEEecC----------CCCeeeeeeCCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecC
Q 018853 221 FGSQK-IWVDHCSLSYC----------TDGLIDAIMGSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGV 289 (349)
Q Consensus 221 ~gs~n-VWIDHcS~s~~----------~Dglid~~~gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~ 289 (349)
.+++| |.|++|++... .|| +|+ .+++|+|+||.|..-+.+.-+++. .+|++.++++..
T Consensus 125 ~~~~n~v~i~~v~I~~~~~d~~~~~~NtDG-idi--~s~nV~I~n~~i~~gDDcIaiksg--------~nI~i~n~~~~~ 193 (335)
T 1k5c_A 125 GPTDAHLTLDGITVDDFAGDTKNLGHNTDG-FDV--SANNVTIQNCIVKNQDDCIAINDG--------NNIRFENNQCSG 193 (335)
T ss_dssp EEEEEEEEEESCEEECGGGGGGGCCCSCCS-EEE--ECSSEEEESCEEESSSCSEEEEEE--------EEEEEESCEEES
T ss_pred EccCCeEEEEEEEEECCCCcccccCCCCCe-Ecc--cCCeEEEEeeEEEcCCCEEEeeCC--------eeEEEEEEEEEC
Confidence 99999 99999999763 466 465 799999999999988776666543 489999999864
Q ss_pred CCcCcCccc----CCC---eEEEEcceEeC
Q 018853 290 ALVQRMPRC----RRG---YIHVVNNDFTS 312 (349)
Q Consensus 290 n~~~R~Pr~----R~G---~~HvvNN~~~~ 312 (349)
+ .. =.+ +.+ .+++.|+.+.+
T Consensus 194 g-hG--isIGS~g~~~~v~nV~v~n~~~~~ 220 (335)
T 1k5c_A 194 G-HG--ISIGSIATGKHVSNVVIKGNTVTR 220 (335)
T ss_dssp S-CC--EEEEEECTTCEEEEEEEESCEEEE
T ss_pred C-cc--CeEeeccCCCCEEEEEEEeeEEEC
Confidence 3 11 111 012 56777777765
No 50
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=96.79 E-value=0.021 Score=55.58 Aligned_cols=113 Identities=12% Similarity=0.149 Sum_probs=68.7
Q ss_pred hHHHHhhcC---CCeEEEEecCeEEEecceEEe-cCCceEEeeCc-eEEEEec------------------cEEEEeeec
Q 018853 124 TLRHAVIQT---EPIWITFASNMLIKLKHELII-NSYKTIDGRGA-NVEITGN------------------GCLTLQYVS 180 (349)
Q Consensus 124 tLr~av~~~---~P~~IvF~~~g~I~L~~~L~i-~snkTI~G~ga-~i~I~G~------------------g~l~i~~a~ 180 (349)
|+.+||.+- ..+++|+=..|+-+ +.|.| .+++||.|.|. ...|.+. +.+.+ .++
T Consensus 20 TIq~Ai~aap~~~~~~~I~I~~G~Y~--E~V~I~k~~Itl~G~g~~~tiI~~~~~~~~~~~~g~~~gT~~satv~v-~a~ 96 (342)
T 2nsp_A 20 TIADAIASAPAGSTPFVILIKNGVYN--ERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITI-SAK 96 (342)
T ss_dssp SHHHHHHTSCSSSSCEEEEECSEEEE--CCEEECSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHHHTCSEEE-CSB
T ss_pred hHHHHHHhcccCCCcEEEEEeCCEEE--EEEEEecCeEEEEecCCCCeEEEecccccccccccCcccccceeEEEE-ECC
Confidence 789999752 12345554566654 56777 47899999985 4566542 24677 599
Q ss_pred cEEEEeeEEEeeccCC--CccccCCCCccccCCCCCCCcEEee-CCceEEEEeeEEecCCCCeee
Q 018853 181 HVIIHNVHIHHCKPSG--NTMIASSPTHVGYRGKSDGDGISIF-GSQKIWVDHCSLSYCTDGLID 242 (349)
Q Consensus 181 NVIIrnL~I~~~~p~~--~~~v~~~~~~~G~r~~~dgDaIsi~-gs~nVWIDHcS~s~~~Dglid 242 (349)
+++++||.|++..+.. ...-+..|. +. .....-||.|. .++++.+.+|.|....|.|.+
T Consensus 97 ~f~a~nlt~~Nt~~~~~~~~~~~~~~~--~~-~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~ 158 (342)
T 2nsp_A 97 DFSAQSLTIRNDFDFPANQAKSDSDSS--KI-KDTQAVALYVTKSGDRAYFKDVSLVGYQATLYV 158 (342)
T ss_dssp SCEEEEEEEEECCCHHHHHHSCTTCTT--CC-SCCCCCSEEECTTCBSEEEEEEEEECSTTCEEE
T ss_pred CEEEEeeEEEccccccccccccccCCc--cc-cCCceEEEEEeeccCcEEEEeeEEecccceEEE
Confidence 9999999999864100 000000000 00 01122345223 588999999999988886653
No 51
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=96.64 E-value=0.031 Score=54.97 Aligned_cols=126 Identities=17% Similarity=0.172 Sum_probs=74.2
Q ss_pred hHHHHhhcC----CCeEEEEecCeEEEecceEEe-cCCceEEeeCc-eEEEEec------------------cEEEEeee
Q 018853 124 TLRHAVIQT----EPIWITFASNMLIKLKHELII-NSYKTIDGRGA-NVEITGN------------------GCLTLQYV 179 (349)
Q Consensus 124 tLr~av~~~----~P~~IvF~~~g~I~L~~~L~i-~snkTI~G~ga-~i~I~G~------------------g~l~i~~a 179 (349)
|+.+||.+- .+.+|.+ ..|+-+ +.|.| .+++||.|.|. ...|.+. ..+.+ .+
T Consensus 46 TIq~Ai~aa~~~~~~~~I~I-~~G~Y~--E~v~I~k~~itl~G~g~~~TiIt~~~~~~~~~~~g~~~gt~~saTv~V-~a 121 (364)
T 3uw0_A 46 SINAALKSAPKDDTPFIIFL-KNGVYT--ERLEVARSHVTLKGENRDGTVIGANTAAGMLNPQGEKWGTSGSSTVLV-NA 121 (364)
T ss_dssp CHHHHHHHSCSSSSCEEEEE-CSEEEC--CCEEECSTTEEEEESCTTTEEEEECCCTTSBCTTCSBCCTTTCCSEEE-CS
T ss_pred cHHHHHhhcccCCCcEEEEE-eCCEEE--EEEEEcCCeEEEEecCCCCeEEEccccccccccccccccccCeeEEEE-EC
Confidence 577777642 2334444 455543 55777 46799999986 4566642 35666 69
Q ss_pred ccEEEEeeEEEeeccCC--CccccCCCCccccCCCCCCCcEEee-CCceEEEEeeEEecCCCCeeeeeeCCceEEEEcce
Q 018853 180 SHVIIHNVHIHHCKPSG--NTMIASSPTHVGYRGKSDGDGISIF-GSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNY 256 (349)
Q Consensus 180 ~NVIIrnL~I~~~~p~~--~~~v~~~~~~~G~r~~~dgDaIsi~-gs~nVWIDHcS~s~~~Dglid~~~gs~~ITISnn~ 256 (349)
++++++||.|++..+.. ++.-.+.|.. . .....-||.+. .++++.+.+|.|....|.|.+ +.+...-+.+|+
T Consensus 122 ~~f~a~nitf~Nt~~~~~~~~~~~~~p~~--~-~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~--~~~gr~yf~~c~ 196 (364)
T 3uw0_A 122 PNFTAENLTIRNDFDFPANKKKADTDPTK--L-KDTQAVALLLAENSDKARFKAVKLEGYQDTLYS--KTGSRSYFSDCE 196 (364)
T ss_dssp TTCEEEEEEEEECCCHHHHHHSCTTCTTC--C-SCCCCCSEEECTTCEEEEEEEEEEECSBSCEEE--CTTCEEEEESCE
T ss_pred CCEEEEeeeeEcCCccccccccccccccc--c-cCCccEEEEEecCCCeEEEEeeEEEecccceEe--CCCCCEEEEcCE
Confidence 99999999999864200 0000000100 0 01223466665 589999999999998887764 223344444444
Q ss_pred ec
Q 018853 257 FS 258 (349)
Q Consensus 257 f~ 258 (349)
|.
T Consensus 197 I~ 198 (364)
T 3uw0_A 197 IS 198 (364)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 52
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=96.32 E-value=0.17 Score=49.52 Aligned_cols=127 Identities=17% Similarity=0.128 Sum_probs=74.6
Q ss_pred EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCc-EEee-CCceEEEEeeEEecCCCCeeeeeeC----
Q 018853 173 CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMG---- 246 (349)
Q Consensus 173 ~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDa-Isi~-gs~nVWIDHcS~s~~~Dglid~~~g---- 246 (349)
.|.+.+++||+|.+..|..+...+. +.|..+|.. ..-.|+ +.+. ++++|=|.+|.|....-+++--..+
T Consensus 135 aI~i~~s~nVWIDH~s~s~~~~~d~----~~~~~~G~~-~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~ 209 (355)
T 1pcl_A 135 AAVIDNSTNVWVDHVTISDGSFTDD----KYTTKDGEK-YVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGS 209 (355)
T ss_pred eEEecCCCcEEEEeeEEeccccCcc----ccccccCcc-ccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcc
Confidence 3888899999999999997642111 112222221 111344 4565 7899999999998865554421111
Q ss_pred ----CceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCc-------CcccC-CCeEEEEcceEeCC
Q 018853 247 ----STGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQR-------MPRCR-RGYIHVVNNDFTSW 313 (349)
Q Consensus 247 ----s~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R-------~Pr~R-~G~~HvvNN~~~~~ 313 (349)
.-.||+-+|+|.++..=+ ..-+.-.+-+.+|+|. +.... .-..+ .+.+-+.||||...
T Consensus 210 ~d~g~~~vT~hhN~f~~~~~R~--------PrvR~G~~Hv~NN~~~-~~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~ 279 (355)
T 1pcl_A 210 QDSGKLRVTFHNNVFDRVTERA--------PRVRFGSIHAYNNVYL-GDVKHSVYPYLYSFGLGTSGSILSESNSFTLS 279 (355)
T ss_pred cccCcceEEEECcEEeCCcccC--------CceecceEEEEcceEE-cccCCCccccceEecCCCCcEEEEEccEEECC
Confidence 126999999997543211 0112224778889994 22111 00112 34788899999865
No 53
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=96.32 E-value=0.084 Score=52.45 Aligned_cols=149 Identities=13% Similarity=0.055 Sum_probs=83.8
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEee-CCceEEEEeeEEecCCCCeeeeeeC------
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIF-GSQKIWVDHCSLSYCTDGLIDAIMG------ 246 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~-gs~nVWIDHcS~s~~~Dglid~~~g------ 246 (349)
|.+.+++||+|.+..|..+...+ .+.|..||......+..|.+. ++++|=|-+|-|....-+++--..+
T Consensus 186 I~i~~s~nVWIDHcs~s~~~~~d----~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~ 261 (399)
T 2o04_A 186 ITINGGTHIWIDHCTFNDGSRPD----STSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDD 261 (399)
T ss_dssp EEEESCEEEEEESCEEECTTCCG----GGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGT
T ss_pred EEecCCCcEEEEeeeeecCCCcc----ccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCcccc
Confidence 88889999999999999753110 112223333222122235666 6888888888888754444411111
Q ss_pred -CceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCc-------CcccC-CCeEEEEcceEeCCcce-
Q 018853 247 -STGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQR-------MPRCR-RGYIHVVNNDFTSWEMY- 316 (349)
Q Consensus 247 -s~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R-------~Pr~R-~G~~HvvNN~~~~~~~y- 316 (349)
.-.||+-+|+|.++..= .. .-+.-++-+.+|+|. +.... .=..+ .+.+-+.||||.+....
T Consensus 262 g~~~vT~h~N~f~~~~~R-----~P---r~R~G~~Hv~NN~~~-n~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~~~~~ 332 (399)
T 2o04_A 262 GKLKITLHHNRYKNIVQA-----AP---RVRFGQVHVYNNYYE-GSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVPGLSA 332 (399)
T ss_dssp TCCCEEEESCEEEEEEEC-----TT---EESSCEEEEESCEEE-CCTTCSSSCCCCSEEECTTCEEEEESCEEECTTCCS
T ss_pred CceeEEEECcEecCCccc-----CC---CcccceEEEEcceEE-CCCCCCccceeeEeccCCCcEEEEEceEEECCCCCc
Confidence 12899999999754311 00 011125788899995 22211 10111 35899999999875211
Q ss_pred --EEecC-CCceEEEEcceEeC
Q 018853 317 --AIGGS-ANPTINSQGNRYTA 335 (349)
Q Consensus 317 --aigg~-~~~~i~~egN~F~~ 335 (349)
.+... .+..+...+|+|..
T Consensus 333 ~~~~~~~s~~~~~~~~gn~~~g 354 (399)
T 2o04_A 333 AKTISVFSGGTALYDSGTLLNG 354 (399)
T ss_dssp GGGEEECTTCCBCEEESCEETT
T ss_pred cceeeeccCCceEEEeCceecC
Confidence 01111 23345678888853
No 54
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.29 E-value=0.037 Score=54.26 Aligned_cols=112 Identities=14% Similarity=0.178 Sum_probs=71.9
Q ss_pred CCcEEee-CCceEEEEeeEEec-------CCCCeeeeeeCCceEEEEcceeccCCceee-ccCCCCccCCCCceEEEEee
Q 018853 215 GDGISIF-GSQKIWVDHCSLSY-------CTDGLIDAIMGSTGITISNNYFSHHNEVML-LGHNDKYALDMGMQVTIAFN 285 (349)
Q Consensus 215 gDaIsi~-gs~nVWIDHcS~s~-------~~Dglid~~~gs~~ITISnn~f~~h~k~~L-~G~sd~~~~d~g~~VTi~hN 285 (349)
+.+|.|. +++||+|.++.|.. ..|++- ..++++|-|-+|.|+.-...++ .|.. ....||+-+|
T Consensus 123 G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~--i~~s~nVwIDHcs~s~~~d~~~~~g~~------~s~~VTISnn 194 (359)
T 1idk_A 123 GKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAIT--LDDCDLVWIDHVTTARIGRQHYVLGTS------ADNRVSLTNN 194 (359)
T ss_dssp SCCEEECTTCEEEEEESCEEEEECTTEETSCCSEE--ECSCEEEEEESCEEEEESSCSEEECCC------TTCEEEEESC
T ss_pred cceEEEecCCCcEEEeCeEEEcccccccccCCcee--ecCCCcEEEEeeEeecCCCCcEEeccc------CcceEEEECc
Confidence 4579998 89999999999996 346542 4578999999999985322222 1211 1148999999
Q ss_pred EecCCCcCcCcccC---------CC---eEEEEcceEeCCcceEEecCCCceEEEEcceEeC
Q 018853 286 HFGVALVQRMPRCR---------RG---YIHVVNNDFTSWEMYAIGGSANPTINSQGNRYTA 335 (349)
Q Consensus 286 ~F~~n~~~R~Pr~R---------~G---~~HvvNN~~~~~~~yaigg~~~~~i~~egN~F~~ 335 (349)
+|.+...-+ -++. .| .+-+.+|+|.+-....-....+..+.+.+|||..
T Consensus 195 ~f~~~~~~s-~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r~g~~~hv~NN~~~n 255 (359)
T 1idk_A 195 YIDGVSDYS-ATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQDNTLLHAVNNYWYD 255 (359)
T ss_dssp EEECBCSCB-TTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEECTTCEEEEESCEEEE
T ss_pred EecCCcccc-cccCccccceEEEEecCCCeEEEceEeecCcccCccccCCceEEEECCEEec
Confidence 997432111 1121 12 6788899998764322211223358899999976
No 55
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=96.01 E-value=0.36 Score=47.71 Aligned_cols=85 Identities=18% Similarity=0.127 Sum_probs=51.5
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCC--------CccccCC----CCCCCcEEeeC--CceEEEEeeEEecCCCC
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSP--------THVGYRG----KSDGDGISIFG--SQKIWVDHCSLSYCTDG 239 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~--------~~~G~r~----~~dgDaIsi~g--s~nVWIDHcS~s~~~Dg 239 (349)
|.+.+ ++++|++++|++....| -.+...+ .-++... ...+|||.+.. +....|.+|.+.+..|.
T Consensus 132 I~v~g-s~~~i~n~~i~~n~~~G-I~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~dd 209 (400)
T 1ru4_A 132 AYVIG-SHNTFENTAFHHNRNTG-LEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDD 209 (400)
T ss_dssp EEECS-SSCEEESCEEESCSSCS-EEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSC
T ss_pred EEEeC-CCcEEEeEEEECCCcee-EEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCC
Confidence 66764 77788999998764211 1111111 0011111 13468888763 36778889988877766
Q ss_pred eeeeeeCCceEEEEcceeccC
Q 018853 240 LIDAIMGSTGITISNNYFSHH 260 (349)
Q Consensus 240 lid~~~gs~~ITISnn~f~~h 260 (349)
-+|+......+||.+|...+.
T Consensus 210 Gidl~~~~~~v~i~nn~a~~N 230 (400)
T 1ru4_A 210 GFDLFDSPQKVVIENSWAFRN 230 (400)
T ss_dssp SEECTTCCSCCEEESCEEEST
T ss_pred cEEEEecCCCEEEEeEEEECC
Confidence 667765566789999987643
No 56
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=95.79 E-value=0.13 Score=49.61 Aligned_cols=141 Identities=16% Similarity=0.145 Sum_probs=80.5
Q ss_pred EEEe-----eeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCc-EEee-CCceEEEEeeEEecCCCCeeeeee-
Q 018853 174 LTLQ-----YVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIM- 245 (349)
Q Consensus 174 l~i~-----~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDa-Isi~-gs~nVWIDHcS~s~~~Dglid~~~- 245 (349)
|.+. .++||+|.+..|......-. + ..+.-.|+ |.+. ++++|=|-+|-|....-+++--..
T Consensus 116 I~i~g~~~~~s~nVWIDH~s~s~~~~~~~----------~-~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd 184 (330)
T 2qy1_A 116 ISLEGNSSGEPSKIWVDHNTVFASLTKCS----------G-AGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSD 184 (330)
T ss_dssp EEEECBTTBCCEEEEEESCEEECCCCCCT----------T-CTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSST
T ss_pred eeeccccCcccccEEEEeEEEEccccccc----------c-CCcceeecccccccCcceEEEEcceeccCCeEEEECCCC
Confidence 7776 59999999999974321000 0 00112243 5655 588888888888765444431110
Q ss_pred -----CCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCcCcccC-CCeEEEEcceEeCCcc--eE
Q 018853 246 -----GSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-RGYIHVVNNDFTSWEM--YA 317 (349)
Q Consensus 246 -----gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R-~G~~HvvNN~~~~~~~--ya 317 (349)
+...||+-+|+|.+...= .. .-+..++-+.+|+|. +.....-..+ .+.+-+.||||.+... ..
T Consensus 185 ~~~~~~~~~vT~h~N~f~~~~~R-----~P---r~r~G~~hv~NN~~~-n~~~~~i~~~~~~~i~~e~N~F~~~~~p~~~ 255 (330)
T 2qy1_A 185 SDTKNSAARTTYHHNRFENVESR-----VP---LQRFGLSHIYNNYFN-NVTTSGINVRMGGIAKIESNYFENIKNPVTS 255 (330)
T ss_dssp TCGGGGGCEEEEESCEEEEEEEC-----TT---EEESSEEEEESCEEE-EECSCSEEEETTCEEEEESCEEEEEESSEEE
T ss_pred ccccCCCceEEEECcEEcCCCCC-----CC---ceecceEEEEeeEEE-cccceEeccCCCcEEEEEccEEECCCCceee
Confidence 115999999999753210 00 011225778889995 3333332222 3588899999986531 11
Q ss_pred EecCCCceEEEEcceEeC
Q 018853 318 IGGSANPTINSQGNRYTA 335 (349)
Q Consensus 318 igg~~~~~i~~egN~F~~ 335 (349)
...+.......++| |..
T Consensus 256 ~~~~~~g~~~~~~n-~~~ 272 (330)
T 2qy1_A 256 RDSSEIGYWDLINN-YVG 272 (330)
T ss_dssp CSSSSBCEEEEESC-EEC
T ss_pred ccCCCceeEEEeCC-ccc
Confidence 12223345777888 655
No 57
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=95.37 E-value=0.12 Score=51.66 Aligned_cols=104 Identities=16% Similarity=0.191 Sum_probs=68.7
Q ss_pred EEEeeeccEEEEeeEEEeecc----CC---CccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEec-CCCCeeeeee
Q 018853 174 LTLQYVSHVIIHNVHIHHCKP----SG---NTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSY-CTDGLIDAIM 245 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p----~~---~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~-~~Dglid~~~ 245 (349)
|.++++++..|++=.|..+-- .| ...|.+. . .+...+|++|.++.+++.-|.++.+.+ +.||+. ..
T Consensus 187 I~l~~a~~~~I~~N~I~e~GNgI~L~G~~~~~~I~~N--~--i~~~~dG~gIyl~ns~~~~I~~N~i~~~~R~gIh--~m 260 (410)
T 2inu_A 187 LIVRGADALRVNDNMIAECGNCVELTGAGQATIVSGN--H--MGAGPDGVTLLAENHEGLLVTGNNLFPRGRSLIE--FT 260 (410)
T ss_dssp EEETTEESCEEESCEEESSSEEEEECSCEESCEEESC--E--EECCTTSEEEEEESEESCEEESCEECSCSSEEEE--EE
T ss_pred EEEccCCCcEEECCEEEecCCceeeccccccceEecc--e--eeecCCCCEEEEEeCCCCEEECCCcccCcceEEE--EE
Confidence 677788888888888873100 00 0011110 0 123456777999999999999997754 888876 56
Q ss_pred CCceEEEEcceeccCCcee-eccCCCCccCCCCceEEEEeeEecCC
Q 018853 246 GSTGITISNNYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVA 290 (349)
Q Consensus 246 gs~~ITISnn~f~~h~k~~-L~G~sd~~~~d~g~~VTi~hN~F~~n 290 (349)
.+++.+|++|.|.+...++ .+.+. ..+.++..|+|..+
T Consensus 261 ~s~~~~i~~N~f~~~~~Gi~~M~s~-------~~~n~v~~N~f~~~ 299 (410)
T 2inu_A 261 GCNRCSVTSNRLQGFYPGMLRLLNG-------CKENLITANHIRRT 299 (410)
T ss_dssp SCBSCEEESCEEEESSSCSEEEESS-------CBSCEEESCEEEEE
T ss_pred ccCCCEEECCEEecceeEEEEEEcC-------CCCCEEECCEEecc
Confidence 8999999999999765543 33322 12477888999754
No 58
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=95.35 E-value=0.18 Score=48.19 Aligned_cols=203 Identities=8% Similarity=-0.002 Sum_probs=97.0
Q ss_pred hHHHHhhc---CCCeEEEEecCeEEEecc-------eEEecCCceEEeeCce-EEEEec-c------EEEEe----eecc
Q 018853 124 TLRHAVIQ---TEPIWITFASNMLIKLKH-------ELIINSYKTIDGRGAN-VEITGN-G------CLTLQ----YVSH 181 (349)
Q Consensus 124 tLr~av~~---~~P~~IvF~~~g~I~L~~-------~L~i~snkTI~G~ga~-i~I~G~-g------~l~i~----~a~N 181 (349)
.|+.|+.+ .++-+|+|-. |+-.++. +|.+.|++||.|.|.+ ..|... + .+... ...+
T Consensus 21 aiq~Ai~~a~~~gg~~v~~p~-G~y~~~~~~~~~~g~l~~~~~v~l~g~g~~~t~l~~~~~~~~~~~~~~~~~~g~~~~~ 99 (377)
T 2pyg_A 21 SIQAAIDAAYAAGGGTVYLPA-GEYRVSAAGEPGDGCLMLKDGVYLAGAGMGETVIKLIDGSDQKITGMVRSAYGEETSN 99 (377)
T ss_dssp HHHHHHHHHHHTTSEEEEECS-EEEEECCCSSGGGCSEECCTTEEEEESSBTTEEEEECTTCBSCEEEEEECCTTSCCEE
T ss_pred HHHHHHHHHHhcCCCEEEECC-eEEEEcccccCCcccEEecCCeEEEEcCCCCcEEEecCCCccCccceEeccCCCcceE
Confidence 47777754 3567888864 6777663 7888999999998753 333321 1 01111 1256
Q ss_pred EEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCC-CCeeeeeeCCceEEEEcceecc-
Q 018853 182 VIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCT-DGLIDAIMGSTGITISNNYFSH- 259 (349)
Q Consensus 182 VIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~-Dglid~~~gs~~ITISnn~f~~- 259 (349)
+-+++|+|.+......+.+ .||..... ...+.++++++|.+|++..+. +| +.+...+.++++.||.+..
T Consensus 100 ~~~~~~~I~G~~~~~~G~i------dGw~~~~~--~~~~~~~~nv~I~~~~i~n~~~~g-i~~~~~~~~~~i~n~~~~~~ 170 (377)
T 2pyg_A 100 FGMRDLTLDGNRDNTSGKV------DGWFNGYI--PGGDGADRDVTIERVEVREMSGYG-FDPHEQTINLTIRDSVAHDN 170 (377)
T ss_dssp EEEEEEEEECCGGGCBSCE------EEEEECSC--TTSSCCEEEEEEEEEEEECCSSCS-EEECSSEEEEEEESCEEESC
T ss_pred EEEEEEEEECCCccCCccc------cceecccC--ccccccccceEEEeEEEEecccce-EEeecccCCeEEEeEEeecC
Confidence 7788888875321000111 01110000 001123455555555555432 22 2222233344444444421
Q ss_pred -CCceeeccC--------------CCCccCCC-CceEEEEeeEecCCCcCcC-------cccCCCeEEEEcceEeCCcce
Q 018853 260 -HNEVMLLGH--------------NDKYALDM-GMQVTIAFNHFGVALVQRM-------PRCRRGYIHVVNNDFTSWEMY 316 (349)
Q Consensus 260 -h~k~~L~G~--------------sd~~~~d~-g~~VTi~hN~F~~n~~~R~-------Pr~R~G~~HvvNN~~~~~~~y 316 (349)
.+-..+..+ .+.-.... ...+++.+|.+..+...-. +...-..+++.||..++-..+
T Consensus 171 ~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~ 250 (377)
T 2pyg_A 171 GLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNARE 250 (377)
T ss_dssp SSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSC
T ss_pred CCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccC
Confidence 111111100 00000011 2468888888864321111 011234678889987764444
Q ss_pred EEecCCCceEEEEcceEeCC
Q 018853 317 AIGGSANPTINSQGNRYTAP 336 (349)
Q Consensus 317 aigg~~~~~i~~egN~F~~~ 336 (349)
++.......+.+++|.|...
T Consensus 251 Gi~~~~~~~v~i~~N~i~~~ 270 (377)
T 2pyg_A 251 GVLLKMTSDITLQNADIHGN 270 (377)
T ss_dssp SEEEEEEEEEEEESCEEESC
T ss_pred ceEeccccCeEEECCEEECC
Confidence 44322334677888888765
No 59
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=95.23 E-value=0.2 Score=49.96 Aligned_cols=148 Identities=15% Similarity=0.050 Sum_probs=84.0
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEee-CCceEEEEeeEEecCCCCeeeeeeCC-----
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIF-GSQKIWVDHCSLSYCTDGLIDAIMGS----- 247 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~-gs~nVWIDHcS~s~~~Dglid~~~gs----- 247 (349)
|.|.+++||+|.+..|..+... -.+.|..+|......+..|.+. ++++|=|-+|-|....-+++--..++
T Consensus 192 I~i~~s~nVWIDHcs~s~~~~~----d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~ 267 (416)
T 1vbl_A 192 ISIEGSSHIWIDHNTFTDGDHP----DRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADS 267 (416)
T ss_dssp EEEESCEEEEEESCEEECTTCC----GGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGT
T ss_pred EEecCCceEEEEccEEecCCCc----ccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccC
Confidence 8888999999999999975311 0112223333222112235566 68888888888887544443111111
Q ss_pred --ceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcCc----C--cccC-CCeEEEEcceEeCCc----
Q 018853 248 --TGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQR----M--PRCR-RGYIHVVNNDFTSWE---- 314 (349)
Q Consensus 248 --~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R----~--Pr~R-~G~~HvvNN~~~~~~---- 314 (349)
-.||+-+|+|.++..=| . .-+.-++-+.+|+|.. .... + =..+ .+.+-+-||||..-.
T Consensus 268 g~~~VT~hhN~f~~~~~R~-----P---r~R~G~~Hv~NN~~~n-~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~~~~~~ 338 (416)
T 1vbl_A 268 GHLRVTLHHNYYKNVTQRL-----P---RVRFGQVHIYNNYYEF-SNLADYDFQYAWGVGVFSQIYAQNNYFSFDWDIDP 338 (416)
T ss_dssp TCCCEEEESCEEEEEEECS-----S---EESSCEEEEESCEEEE-CTTSSSCCCCSEEEETTCEEEEESCEEEESSCCCG
T ss_pred CceEEEEECcEecCCccCC-----c---ccccceEEEEcceEEC-CCCCcccceeEeccCCCcEEEEECCEEECCCCCCc
Confidence 26999999997543211 0 0122257789999952 2211 0 0011 357889999998541
Q ss_pred --ceEEecCCCceEEEEcceEe
Q 018853 315 --MYAIGGSANPTINSQGNRYT 334 (349)
Q Consensus 315 --~yaigg~~~~~i~~egN~F~ 334 (349)
...-....+..+...||+|.
T Consensus 339 ~~~~~~~~~~~~~~~~~gn~~~ 360 (416)
T 1vbl_A 339 SLIIKVWSKNEESMYETGTIVD 360 (416)
T ss_dssp GGSEEEECSSCCEEEEESCEEE
T ss_pred cceeeeeccCCceEEecCCEEe
Confidence 11111113446778899994
No 60
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=94.03 E-value=0.2 Score=48.97 Aligned_cols=142 Identities=18% Similarity=0.166 Sum_probs=78.0
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCc-EEee-CCceEEEEeeEEecCCCCeeeeeeCC---c
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIF-GSQKIWVDHCSLSYCTDGLIDAIMGS---T 248 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDa-Isi~-gs~nVWIDHcS~s~~~Dglid~~~gs---~ 248 (349)
|.+.+++||+|.+..|...... . ...++ .....|+ +.+. ++++|=|.+|-|....-..+.-...+ .
T Consensus 133 I~i~~s~nVWIDH~s~s~~~~~--~--~g~~~-----~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~g~ 203 (353)
T 1air_A 133 IRVDDSPNVWVDHNELFAANHE--C--DGTPD-----NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGR 203 (353)
T ss_dssp EEEESCCSEEEESCEEECCSCC--C--TTCGG-----GCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCCCC
T ss_pred EEeeCCCcEEEEeeEEecCCcc--c--ccccc-----cccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCCCc
Confidence 8888999999999999853210 0 00000 0011344 4554 78899999998886543333211111 4
Q ss_pred eEEEEcceeccCCcee-eccCCCCccCCCCceEEEEeeEecCCCcCcCcccC-CCeEEEEcceEeCCcc--eEE-ecCCC
Q 018853 249 GITISNNYFSHHNEVM-LLGHNDKYALDMGMQVTIAFNHFGVALVQRMPRCR-RGYIHVVNNDFTSWEM--YAI-GGSAN 323 (349)
Q Consensus 249 ~ITISnn~f~~h~k~~-L~G~sd~~~~d~g~~VTi~hN~F~~n~~~R~Pr~R-~G~~HvvNN~~~~~~~--yai-gg~~~ 323 (349)
.||+-+|+|.++..=+ ++ +.-++-+.+|+|. +...+.-..+ .+.+-+.||||.+-.. ..- .+...
T Consensus 204 ~vT~hhN~f~~~~~R~Pr~---------r~G~~Hv~NN~~~-n~~~~~~~~~~~~~i~~e~N~F~~~~~p~~~~~~~~~~ 273 (353)
T 1air_A 204 NITYHHNYYNDVNARLPLQ---------RGGLVHAYNNLYT-NITGSGLNVRQNGQALIENNWFEKAINPVTSRYDGKNF 273 (353)
T ss_dssp EEEEESCEEEEEEECSCEE---------ESSEEEEESCEEE-EESSCSEEEETTCEEEEESCEEEEEESSEEECSSSSSC
T ss_pred eEEEEceEEcCCcCCCCCC---------cCceEEEEccEEE-CCCCceeccCCCcEEEEEceEEECCCCceEecCCCCCC
Confidence 7999999997643111 11 1125667888885 3332222222 3578888888876421 111 12223
Q ss_pred ceEEEEcceEe
Q 018853 324 PTINSQGNRYT 334 (349)
Q Consensus 324 ~~i~~egN~F~ 334 (349)
......+|.|.
T Consensus 274 g~~~~~~n~~~ 284 (353)
T 1air_A 274 GTWVLKGNNIT 284 (353)
T ss_dssp CEEEEESCSCC
T ss_pred ceeEecccccc
Confidence 45555666553
No 61
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=93.89 E-value=0.2 Score=49.13 Aligned_cols=126 Identities=17% Similarity=0.115 Sum_probs=72.4
Q ss_pred EEEee-eccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCC-cEEee-CCceEEEEeeEEecCCCCeeeeeeC----
Q 018853 174 LTLQY-VSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGD-GISIF-GSQKIWVDHCSLSYCTDGLIDAIMG---- 246 (349)
Q Consensus 174 l~i~~-a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgD-aIsi~-gs~nVWIDHcS~s~~~Dglid~~~g---- 246 (349)
|.|.+ ++||+|.+..|..+.... .+.|..+|... .-.| .|.+. ++++|=|-+|-|....-+++--..+
T Consensus 146 I~i~~~s~nVWIDHcs~s~~~~~~----~~~~~~~G~~~-~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~ 220 (361)
T 1pe9_A 146 MNITNGAHHVWIDHVTISDGNFTD----DMYTTKDGETY-VQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGS 220 (361)
T ss_dssp EEEETTCEEEEEESCEEECTTSCG----GGCCEETTEEC-CCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHH
T ss_pred EEeecCCceEEEEccEeecccccc----cccccccCcce-eeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcc
Confidence 88888 999999999999763211 11222233211 1134 35665 6888888888887654444321111
Q ss_pred ----CceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEecCCCcC-------cCcccC-CCeEEEEcceEeCC
Q 018853 247 ----STGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHFGVALVQ-------RMPRCR-RGYIHVVNNDFTSW 313 (349)
Q Consensus 247 ----s~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F~~n~~~-------R~Pr~R-~G~~HvvNN~~~~~ 313 (349)
.-.||+-+|+|.++.. -.. .-+.-++-+.+|+|. +... -.-..+ .+.+-+-||||..-
T Consensus 221 ~d~g~~~vT~hhN~f~~~~~-----R~P---r~R~G~~Hv~NN~~~-~~~~~~~~~~~ya~g~~~~~~i~~E~N~F~~~ 290 (361)
T 1pe9_A 221 QDKGKLHVTLFNNVFNRVTE-----RAP---RVRYGSIHSFNNVFK-GDAKDPVYRYQYSFGIGTSGSVLSEGNSFTIA 290 (361)
T ss_dssp HHTTCCEEEEESCEEEEEEE-----CSS---EESSCEEEEESCEEE-EETTCSSSCCCCSEEECTTCEEEEESCEEEEE
T ss_pred cccCcceEEEECeEEcCccc-----cCc---ccccceEEEEcceEe-cccCCCccccceEecCCCCcEEEEECCEEECC
Confidence 1269999999975421 110 012225778899993 1111 000111 35889999999764
No 62
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=93.51 E-value=0.42 Score=48.29 Aligned_cols=87 Identities=16% Similarity=0.111 Sum_probs=60.4
Q ss_pred EEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCc-EEeeCCceEEEEeeEEecCCCCeeeeee-------
Q 018853 174 LTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDG-ISIFGSQKIWVDHCSLSYCTDGLIDAIM------- 245 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDa-Isi~gs~nVWIDHcS~s~~~Dglid~~~------- 245 (349)
+.+ .++||.|+|++|... .+++| +...+++||.|++|.|.. .+|+ .++.
T Consensus 170 i~i-~s~nV~I~n~~I~~g--------------------ddgiGs~~~~~~~NV~V~n~~~~g-g~GI-rIktg~d~IG~ 226 (464)
T 1h80_A 170 RLH-WSRNGIIERIKQNNA--------------------LFGYGLIQTYGADNILFRNLHSEG-GIAL-RMETDNLLMKN 226 (464)
T ss_dssp EEE-EEEEEEEEEEEEESC--------------------CTTCEEEEESEEEEEEEEEEEEES-SEEE-EEECCCHHHHH
T ss_pred cee-eccCEEEeceEEecC--------------------CCeEEecccCCEeEEEEEeeEEEC-CCEE-EEEeCCceecc
Confidence 455 799999999999841 23556 556789999999999887 3332 2322
Q ss_pred ----CCceEEEEcceeccCCceeeccCCCCccCCCCceEEEEeeEe
Q 018853 246 ----GSTGITISNNYFSHHNEVMLLGHNDKYALDMGMQVTIAFNHF 287 (349)
Q Consensus 246 ----gs~~ITISnn~f~~h~k~~L~G~sd~~~~d~g~~VTi~hN~F 287 (349)
...+|+++||.|.+-.....++.+.. .-.+|+|.+-..
T Consensus 227 ~~~g~v~NI~~~Ni~~~nv~~~I~I~p~~~----~isnItfeNI~~ 268 (464)
T 1h80_A 227 YKQGGIRNIFADNIRCSKGLAAVMFGPHFM----KNGDVQVTNVSS 268 (464)
T ss_dssp HTCCEEEEEEEEEEEEESSSEEEEEECTTC----BCCCEEEEEEEE
T ss_pred CCCCcEEEEEEEeEEEECCceeEEEeCCCc----eEeEEEEEEEEE
Confidence 25799999999998877777773211 113577766555
No 63
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=93.11 E-value=0.53 Score=48.82 Aligned_cols=85 Identities=14% Similarity=0.058 Sum_probs=53.0
Q ss_pred EEEeeeccE--EEEeeEEEeeccC-CCccccCCCCcccc---CCCCCCCcEEeeCCceEEEEeeEEecCCCCe-eeee--
Q 018853 174 LTLQYVSHV--IIHNVHIHHCKPS-GNTMIASSPTHVGY---RGKSDGDGISIFGSQKIWVDHCSLSYCTDGL-IDAI-- 244 (349)
Q Consensus 174 l~i~~a~NV--IIrnL~I~~~~p~-~~~~v~~~~~~~G~---r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dgl-id~~-- 244 (349)
+.+..++|| .|+|+++....+. .++.-.. .++-. .-..++|+|.|.. +||.|.+|.+..+..+. +.+.
T Consensus 350 i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~ 426 (574)
T 1ogo_X 350 MDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY-SGASVSRATIWKCHNDPIIQMGWT 426 (574)
T ss_dssp EEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEESSCSEECCS-TTCEEEEEEEEECSSSCSEECCSS
T ss_pred EeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECCCCEEEECC-ccEEEEeEEEECCCCCceEEEcCC
Confidence 334468999 9999998743211 2221100 11100 1134679999865 99999999998765433 4332
Q ss_pred -eCCceEEEEcceeccCC
Q 018853 245 -MGSTGITISNNYFSHHN 261 (349)
Q Consensus 245 -~gs~~ITISnn~f~~h~ 261 (349)
....+|+|+||.|.+..
T Consensus 427 ~g~V~NV~v~N~~i~~~~ 444 (574)
T 1ogo_X 427 SRDISGVTIDTLNVIHTR 444 (574)
T ss_dssp CCCEEEEEEEEEEEEECC
T ss_pred CCcEEEEEEEeEEEECCc
Confidence 24579999999998753
No 64
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=93.01 E-value=1.1 Score=44.87 Aligned_cols=103 Identities=12% Similarity=0.092 Sum_probs=67.3
Q ss_pred hHHHHhhc-----CCCeEEEEecCeEEEecceEEe---cCCceEEeeCce---EEEEe----------------------
Q 018853 124 TLRHAVIQ-----TEPIWITFASNMLIKLKHELII---NSYKTIDGRGAN---VEITG---------------------- 170 (349)
Q Consensus 124 tLr~av~~-----~~P~~IvF~~~g~I~L~~~L~i---~snkTI~G~ga~---i~I~G---------------------- 170 (349)
|+.+||.+ ...+++||=..|+-+ +.|.| ++++||.|.|.. |+|.-
T Consensus 91 TIqeAVdaap~~~~~~r~vI~Ik~GvY~--E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~~~~~~d~~~~~n~~G~~~ 168 (422)
T 3grh_A 91 TIQAAVDAAIIKRTNKRQYIAVMPGEYQ--GTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYM 168 (422)
T ss_dssp SHHHHHHHHHTTCCSSCEEEEECSEEEE--SCEEECCCSSCEEEEECSSSGGGEEEEECCCTTSCHHHHHHHHCGGGSSC
T ss_pred CHHHHHHhchhcCCCccEEEEEeCCeEe--eeEEecCCCCcEEEEeccCCCceEEEeecccccccccccccccccccccc
Confidence 78888864 133566666677665 55777 489999999874 55531
Q ss_pred ------------------------ccEEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceE
Q 018853 171 ------------------------NGCLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKI 226 (349)
Q Consensus 171 ------------------------~g~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nV 226 (349)
.+.+.+ .+++++.+||.|++..+... + ......-|+.+ .++++
T Consensus 169 ~G~~aw~tf~~~~~~~sat~gT~~SAT~~V-~g~~F~a~niTf~Ntag~~~----------~-~~~~QAVAL~v-~gDr~ 235 (422)
T 3grh_A 169 PGKPAWYMYDSCQSKRSDSIGVLCSAVFWS-QNNGLQLQNLTIENTLGDSV----------D-AGNHPAVALRT-DGDQV 235 (422)
T ss_dssp TTSTTHHHHHHHHTCCSSSCCGGGCCSEEE-CCTTCEEEEEEEEETTGGGS----------C-SSCCCCCSEEE-CCSSE
T ss_pred cCccccccccccccccccceeccceEEEEE-ECCCEEEEeeEEEeCCCCCC----------C-CCCCceEEEEe-cCCcE
Confidence 002333 47999999999998642100 0 00112345555 57899
Q ss_pred EEEeeEEecCCCCee
Q 018853 227 WVDHCSLSYCTDGLI 241 (349)
Q Consensus 227 WIDHcS~s~~~Dgli 241 (349)
.+.+|.|....|=|+
T Consensus 236 ~fy~C~f~G~QDTLy 250 (422)
T 3grh_A 236 QINNVNILGRQNTFF 250 (422)
T ss_dssp EEEEEEEECSTTCEE
T ss_pred EEEeeEEEeecceee
Confidence 999999998888776
No 65
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=92.15 E-value=0.51 Score=48.57 Aligned_cols=48 Identities=10% Similarity=0.152 Sum_probs=36.7
Q ss_pred CCCCcEEeeCCceEEEEeeEEecCCCCe-eeee---eCCceEEEEcceeccCC
Q 018853 213 SDGDGISIFGSQKIWVDHCSLSYCTDGL-IDAI---MGSTGITISNNYFSHHN 261 (349)
Q Consensus 213 ~dgDaIsi~gs~nVWIDHcS~s~~~Dgl-id~~---~gs~~ITISnn~f~~h~ 261 (349)
.+.|+|.|.. +||.|.+|.+..+..+. +.+. ....+|+|+||.|.+..
T Consensus 355 ~gDDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~ 406 (549)
T 1x0c_A 355 TDDDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQA 406 (549)
T ss_dssp ESSCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECC
T ss_pred CCCCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECcc
Confidence 4578999976 99999999998765544 5432 24579999999998754
No 66
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=91.46 E-value=0.39 Score=50.01 Aligned_cols=21 Identities=10% Similarity=-0.061 Sum_probs=10.8
Q ss_pred EEEEeeEEecCCCCeeee-eeCC
Q 018853 226 IWVDHCSLSYCTDGLIDA-IMGS 247 (349)
Q Consensus 226 VWIDHcS~s~~~Dglid~-~~gs 247 (349)
|+|.+|.++.+ |..+.+ +.++
T Consensus 233 V~I~nc~I~tG-DDCIAI~KSGs 254 (600)
T 2x6w_A 233 TVYVNCPYSGV-ESCYFSMSSSF 254 (600)
T ss_dssp EEEECSSSEEE-ESCEEECCCTT
T ss_pred EEEEeeEEecC-CcEEEEecCCC
Confidence 66666666544 333344 4343
No 67
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=84.17 E-value=5.8 Score=40.27 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=30.1
Q ss_pred hHHHHhhc----CCCeEEEEecCe----EEEecceEEecCCceEEeeCce
Q 018853 124 TLRHAVIQ----TEPIWITFASNM----LIKLKHELIINSYKTIDGRGAN 165 (349)
Q Consensus 124 tLr~av~~----~~P~~IvF~~~g----~I~L~~~L~i~snkTI~G~ga~ 165 (349)
.+..|+.+ +++.+|+|-. | +..+...|.+.++++|.|.+..
T Consensus 70 AIQkAIdaA~a~~GGGtVyVPa-G~~~~tYlvt~tI~LkSnV~L~Ge~~A 118 (514)
T 2vbk_A 70 AIQNAIDAVASLPSGGELFIPA-SNQAVGYIVGSTLLIPGGVNIRGVGKA 118 (514)
T ss_dssp HHHHHHHHHHTSTTCEEEECCC-CSSTTCEEESSCEEECTTEEEECCSTT
T ss_pred HHHHHHHHHhhcCCCeEEEECC-CCcceeEEECCeEEecCCeEEEEecCc
Confidence 46666652 3678888865 5 6667788888999999998653
No 68
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=82.74 E-value=6.1 Score=41.20 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=30.7
Q ss_pred cEEe---eCCceEEEEeeE----Eec--CCCCeeeeeeCCceEEEEcceeccCCceeec
Q 018853 217 GISI---FGSQKIWVDHCS----LSY--CTDGLIDAIMGSTGITISNNYFSHHNEVMLL 266 (349)
Q Consensus 217 aIsi---~gs~nVWIDHcS----~s~--~~Dglid~~~gs~~ITISnn~f~~h~k~~L~ 266 (349)
.|.+ ..++||.|++|+ +.. -.||. |+|+||.|..-+.+.-+
T Consensus 200 ~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI---------V~I~nc~I~tGDDCIAI 249 (600)
T 2x6w_A 200 AITLGWNGYGSNCYVRKCRFINLVNSSVNADHS---------TVYVNCPYSGVESCYFS 249 (600)
T ss_dssp SEEECBTTBEEEEEEESCEEECCCCCSSCCCEE---------EEEECSSSEEEESCEEE
T ss_pred EEEeCCCCCcccEEEeCeEEcceEecCCCCCEE---------EEEEeeEEecCCcEEEE
Confidence 5677 789999999999 443 35665 88999988876655444
No 69
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=76.66 E-value=26 Score=37.43 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=21.9
Q ss_pred CeEEEEecCeEEEecceEEecCCceEEeeCc
Q 018853 134 PIWITFASNMLIKLKHELIINSYKTIDGRGA 164 (349)
Q Consensus 134 P~~IvF~~~g~I~L~~~L~i~snkTI~G~ga 164 (349)
|.+|+|-. |+-.++.+|.+.+++.|.|.+.
T Consensus 90 ~~~V~~P~-GtYlvs~tI~l~~~t~L~G~~~ 119 (758)
T 3eqn_A 90 PALVYFPP-GTYKVSSPLVVLYQTQLIGDAK 119 (758)
T ss_dssp CEEEEECS-SEEEESSCEECCTTEEEEECSS
T ss_pred ceEEEECC-ceEEEcccEEccCCeEEEecCC
Confidence 46777764 5777777788888888888755
No 70
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=72.38 E-value=17 Score=32.67 Aligned_cols=49 Identities=10% Similarity=0.066 Sum_probs=33.1
Q ss_pred CCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEEEcceeccCC
Q 018853 212 KSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHN 261 (349)
Q Consensus 212 ~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITISnn~f~~h~ 261 (349)
.-..||+++.++..+.|.-+++..+.|..+- ..+...++|+|-+..+..
T Consensus 84 dVcEDA~T~kg~g~~~I~GGgA~~A~DKV~Q-~Ng~Gtv~I~nF~~~~~G 132 (196)
T 3t9g_A 84 DVGEDALTVKSEGVVEVIGGSAKEAADKVFQ-LNAPCTFKVKNFTATNIG 132 (196)
T ss_dssp SCCSCSEEECSSEEEEEESCEEEEEEEEEEE-ECSSEEEEEEEEEEEEEE
T ss_pred eeeceeeEEcCCCeEEEECCCccCCCceEEE-ECCCceEEEeeEEEccCC
Confidence 3456788887777777888888877777764 345566777766665433
No 71
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=64.54 E-value=24 Score=31.73 Aligned_cols=48 Identities=15% Similarity=0.122 Sum_probs=34.7
Q ss_pred CCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEEEcceecc
Q 018853 211 GKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNNYFSH 259 (349)
Q Consensus 211 ~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITISnn~f~~ 259 (349)
..-..||+++.++..++|.-..+..+.|..+- ..+...++|++-+-.+
T Consensus 79 edVcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q-~Ng~Gtv~I~nF~~~~ 126 (197)
T 1ee6_A 79 EDVGEDALTLKSSGTVNISGGAAYKAYDKVFQ-INAAGTINIRNFRADD 126 (197)
T ss_dssp SSCCSCSEEEEESEEEEEESCEEEEEEEEEEE-ECSSEEEEEESCEEEE
T ss_pred eeccccccEEcCCCeEEEECCCccCCCccEEE-ecCCceEEEeeEEEcc
Confidence 34456888888888888888888888887774 3456678888754443
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=55.99 E-value=21 Score=32.09 Aligned_cols=67 Identities=10% Similarity=0.132 Sum_probs=41.2
Q ss_pred EEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEEEEeeEEecCCCCeeeeeeCCceEEEEc
Q 018853 175 TLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISN 254 (349)
Q Consensus 175 ~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVWIDHcS~s~~~Dglid~~~gs~~ITISn 254 (349)
...+.-.++|+|....+.- ..+ | +-|.. ...++|.||++++++....++-.-.....++++|
T Consensus 114 Q~Ng~Gtv~I~nF~~~~~G----Kl~---------R--SCGnc---~~~r~v~i~~v~~~n~k~~l~rtdS~~~~~~~~n 175 (196)
T 3t9g_A 114 QLNAPCTFKVKNFTATNIG----KLV---------R--QNGNT---TFKVVIYLEDVTLNNVKSCVAKSDSPVSELWYHN 175 (196)
T ss_dssp EECSSEEEEEEEEEEEEEE----EEE---------E--ECTTC---CSCEEEEEEEEEEEEEEEEEEECCCTTCEEEEEE
T ss_pred EECCCceEEEeeEEEccCC----EEE---------E--cCCCC---CceeEEEEeCeEEeCCEEEEEEcCCCCCEEEEec
Confidence 3334556778888777531 111 2 11222 2358999999999998887774433445677777
Q ss_pred ceecc
Q 018853 255 NYFSH 259 (349)
Q Consensus 255 n~f~~ 259 (349)
...++
T Consensus 176 ~~~~~ 180 (196)
T 3t9g_A 176 LNVNN 180 (196)
T ss_dssp EEEEE
T ss_pred ceecC
Confidence 76654
No 73
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=44.14 E-value=40 Score=32.03 Aligned_cols=17 Identities=12% Similarity=-0.033 Sum_probs=14.0
Q ss_pred EEEeeeccEEEEeeEEEe
Q 018853 174 LTLQYVSHVIIHNVHIHH 191 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~ 191 (349)
|++ .++++.++|.+|.+
T Consensus 117 l~v-~~d~~~f~~c~f~g 133 (319)
T 1gq8_A 117 LRV-GSDLSAFYRCDILA 133 (319)
T ss_dssp EEE-CCTTEEEEEEEEEC
T ss_pred EEe-cCCcEEEEEeEECc
Confidence 666 58899999999985
No 74
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=43.76 E-value=45 Score=31.67 Aligned_cols=17 Identities=18% Similarity=0.251 Sum_probs=14.1
Q ss_pred EEEeeeccEEEEeeEEEe
Q 018853 174 LTLQYVSHVIIHNVHIHH 191 (349)
Q Consensus 174 l~i~~a~NVIIrnL~I~~ 191 (349)
|++ .++++.++|.+|.+
T Consensus 113 l~v-~~d~~~f~~c~f~g 129 (317)
T 1xg2_A 113 LRV-GADMSVINRCRIDA 129 (317)
T ss_dssp EEE-CCTTEEEESCEEEC
T ss_pred EEE-eCCcEEEEEeEeCc
Confidence 666 58899999999985
No 75
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=41.16 E-value=1e+02 Score=31.40 Aligned_cols=23 Identities=17% Similarity=0.290 Sum_probs=17.1
Q ss_pred CcEEee-CCceEEEEeeEEecCCC
Q 018853 216 DGISIF-GSQKIWVDHCSLSYCTD 238 (349)
Q Consensus 216 DaIsi~-gs~nVWIDHcS~s~~~D 238 (349)
++|.+. .++||.|..|.|+-+.|
T Consensus 210 ~gL~f~eSCrNV~IsnC~FsVGDd 233 (514)
T 2vbk_A 210 VGLHFLGQCVSVSVSSCHFSRGNY 233 (514)
T ss_dssp EEEEEESCCEEEEEESCEEECTTS
T ss_pred cCccccCCCCeEEEeccEEecCcc
Confidence 366655 58899999999987544
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=38.49 E-value=76 Score=28.46 Aligned_cols=87 Identities=16% Similarity=0.294 Sum_probs=49.7
Q ss_pred CCceEEeeCceEEEEecc-------EEEEeeeccEEEEeeEEEeeccCCCccccCCCCccccCCCCCCCcEEeeCCceEE
Q 018853 155 SYKTIDGRGANVEITGNG-------CLTLQYVSHVIIHNVHIHHCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIW 227 (349)
Q Consensus 155 snkTI~G~ga~i~I~G~g-------~l~i~~a~NVIIrnL~I~~~~p~~~~~v~~~~~~~G~r~~~dgDaIsi~gs~nVW 227 (349)
.=.||.|. ....|.|++ .|...+.-.++|+|....+.- ..+| +-|.. + ..++|-
T Consensus 84 DA~T~k~~-g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~nF~~~~~G----Kl~R-----------ScGnc-~--~~r~v~ 144 (197)
T 1ee6_A 84 DALTLKSS-GTVNISGGAAYKAYDKVFQINAAGTINIRNFRADDIG----KLVR-----------QNGGT-T--YKVVMN 144 (197)
T ss_dssp CSEEEEES-EEEEEESCEEEEEEEEEEEECSSEEEEEESCEEEEEE----EEEE-----------ECTTC-C--SCEEEE
T ss_pred cccEEcCC-CeEEEECCCccCCCccEEEecCCceEEEeeEEEccCC----EEEE-----------cCCCC-c--cceEEE
Confidence 34455552 245666555 233334456777777776531 1122 22232 1 247999
Q ss_pred EEeeEEecCCCCeeeeeeCCceEEEEcceeccC
Q 018853 228 VDHCSLSYCTDGLIDAIMGSTGITISNNYFSHH 260 (349)
Q Consensus 228 IDHcS~s~~~Dglid~~~gs~~ITISnn~f~~h 260 (349)
|+++.++.....++-....-+.+||+|...++.
T Consensus 145 i~~v~~~~~k~~i~~~ds~gdtati~n~~~~~v 177 (197)
T 1ee6_A 145 VENCNISRVKDAILRTDSSTSTGRIVNTRYSNV 177 (197)
T ss_dssp EESCEEEEEEEEEEECCCTTCEEEEESCEEESC
T ss_pred EeceEEECceEEEEEecCCCCEEEEEecccCCc
Confidence 999999987666554333447888988776654
No 77
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=25.79 E-value=2.1e+02 Score=27.85 Aligned_cols=100 Identities=19% Similarity=0.177 Sum_probs=48.1
Q ss_pred CCceEEeeCceEEEEeccEEEEeeeccEEEEeeEEEeeccCCCc-------------cccCCCCcc-ccCCCCCCCcEEe
Q 018853 155 SYKTIDGRGANVEITGNGCLTLQYVSHVIIHNVHIHHCKPSGNT-------------MIASSPTHV-GYRGKSDGDGISI 220 (349)
Q Consensus 155 snkTI~G~ga~i~I~G~g~l~i~~a~NVIIrnL~I~~~~p~~~~-------------~v~~~~~~~-G~r~~~dgDaIsi 220 (349)
|++||.|--+.-+..|.. +.+.+.++|-+.+++|.+.+-.|-. +|++-...| |........++-.
T Consensus 142 s~~ti~~nk~~ds~qg~q-vs~~gg~dvsv~~i~fsn~~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~ 220 (542)
T 2x3h_A 142 SNITVESNKATDTTQGQQ-VSLAGGSDVTVSDVNFSNVKGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLA 220 (542)
T ss_dssp EEEEEECCCSSTTCBCCS-EEEESCEEEEEEEEEEEEECSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEE
T ss_pred eeEEEecccCCccccceE-EEecCCCcceEeeeeeeecCCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEe
Confidence 455666543322222322 4455566778888888876522211 111111111 1212222233444
Q ss_pred eCCceEEEEeeEEecC-CCCeeeeeeCCceEEEEcc
Q 018853 221 FGSQKIWVDHCSLSYC-TDGLIDAIMGSTGITISNN 255 (349)
Q Consensus 221 ~gs~nVWIDHcS~s~~-~Dglid~~~gs~~ITISnn 255 (349)
+.+.|-.||.+=..+. ..|.+..+....+=.|||-
T Consensus 221 dss~nslid~via~nypqfgavelk~~a~ynivsnv 256 (542)
T 2x3h_A 221 DSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNV 256 (542)
T ss_dssp ESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEE
T ss_pred ccchhhhhhhhhhhcCCccceEEeecceeeehhhhh
Confidence 5677888888877764 4555555444444344443
Done!