Query 018855
Match_columns 349
No_of_seqs 171 out of 1437
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 04:36:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018855.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018855hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 8E-106 2E-110 775.6 25.6 299 23-329 21-324 (324)
2 cd00693 secretory_peroxidase H 100.0 1.7E-99 4E-104 729.3 25.2 298 26-328 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 2.4E-71 5.2E-76 517.1 11.8 229 43-293 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1.7E-68 3.6E-73 509.4 21.2 232 41-326 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 5.1E-66 1.1E-70 486.7 19.7 230 38-314 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 2.6E-64 5.6E-69 473.8 21.2 231 30-314 4-248 (250)
7 cd00692 ligninase Ligninase an 100.0 1.3E-62 2.9E-67 476.5 21.7 239 39-332 16-290 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 3.7E-62 8E-67 458.6 20.9 221 40-314 17-248 (251)
9 cd00314 plant_peroxidase_like 100.0 1.1E-58 2.4E-63 437.4 17.9 224 42-310 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 2.1E-55 4.6E-60 432.8 18.5 259 41-319 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 1.2E-52 2.5E-57 436.7 20.0 255 41-315 55-404 (716)
12 PRK15061 catalase/hydroperoxid 100.0 3.7E-49 8E-54 408.5 19.7 256 40-315 56-410 (726)
13 cd08201 plant_peroxidase_like_ 100.0 7.9E-50 1.7E-54 375.2 11.2 232 27-310 14-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 1.6E-38 3.4E-43 302.2 17.3 221 45-312 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 2.5E-33 5.4E-38 292.4 17.2 221 42-313 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 8E-33 1.7E-37 287.2 18.2 222 45-313 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1.4E-29 3.1E-34 252.5 15.3 252 41-312 70-416 (730)
18 COG0376 KatG Catalase (peroxid 99.4 1.2E-12 2.6E-17 132.1 14.6 217 45-312 452-725 (730)
19 PTZ00411 transaldolase-like pr 68.2 21 0.00045 35.6 7.7 49 137-185 180-231 (333)
20 PF11895 DUF3415: Domain of un 62.0 8.8 0.00019 30.4 3.0 30 297-330 3-32 (80)
21 PRK05269 transaldolase B; Prov 49.0 60 0.0013 32.1 7.1 49 137-185 170-221 (318)
22 PRK12309 transaldolase/EF-hand 39.2 1.7E+02 0.0037 29.8 8.8 48 137-185 174-225 (391)
23 cd00957 Transaldolase_TalAB Tr 38.6 58 0.0013 32.2 5.2 48 137-185 168-219 (313)
24 PF07172 GRP: Glycine rich pro 35.1 29 0.00064 28.2 2.1 20 1-20 1-20 (95)
25 COG3763 Uncharacterized protei 35.0 64 0.0014 25.0 3.8 28 42-69 24-51 (71)
26 PTZ00459 mucin-associated surf 34.7 25 0.00053 34.3 1.9 14 5-18 8-21 (291)
27 KOG0400 40S ribosomal protein 24.3 46 0.001 28.9 1.6 34 168-202 31-65 (151)
28 PRK12346 transaldolase A; Prov 21.4 3.9E+02 0.0085 26.5 7.6 66 119-185 149-220 (316)
29 TIGR00874 talAB transaldolase. 21.1 5.4E+02 0.012 25.5 8.5 137 136-298 167-310 (317)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=7.8e-106 Score=775.56 Aligned_cols=299 Identities=44% Similarity=0.795 Sum_probs=283.7
Q ss_pred CcCCCCcccccCCChhHHHHHHHHHHHHHhhCccchhhHHHHhhhcccccCCCceeeecCCCCCccccccCCCCCchhHH
Q 018855 23 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGF 102 (349)
Q Consensus 23 ~~~~l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~~rg~ 102 (349)
+.++|+++||++|||++|+||+++|++.+.+||+++|++|||+||||||+||||||||+++ ..||++++|. ++|||
T Consensus 21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf 96 (324)
T PLN03030 21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRGY 96 (324)
T ss_pred hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-CcchH
Confidence 3467999999999999999999999999999999999999999999999999999999864 3799999998 78999
Q ss_pred HHHHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhhhhccCCCCCCCCHHHHHHHHHHcCC
Q 018855 103 EVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGL 182 (349)
Q Consensus 103 ~~I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl 182 (349)
++|+.||++||+.||++|||||||||||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999877764 899999999999999999999
Q ss_pred CCccceeeeccccccccccccccccccccCCCCC-CCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchHHHHH
Q 018855 183 NDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTG-KPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSN 261 (349)
Q Consensus 183 s~~~elVaLsGaHTiG~ahc~~f~~Rl~~f~g~~-~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~n 261 (349)
+.+ |||+||||||||++||.+|.+|||||.|++ .+||+||+.|++.|+..||..+++.+.+++|+.||.+|||+||+|
T Consensus 176 ~~~-DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~n 254 (324)
T PLN03030 176 NTQ-DLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSN 254 (324)
T ss_pred CHH-HheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHH
Confidence 999 999999999999999999999999999875 589999999999999999964333446789999999999999999
Q ss_pred hhhcCcccccchhhccCCccchHHHHHHhhcCH----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 018855 262 LRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQ----TAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 329 (349)
Q Consensus 262 l~~~~gll~SD~~L~~d~~~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~vn 329 (349)
|+.++|+|+|||+|+.|+ +|+++|++||.|+ +.|+++|++||+|||+|+|+||.+||||++|+.+|
T Consensus 255 ll~~rGlL~SDq~L~~d~--~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 255 LKNGRGILESDQKLWTDA--STRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHhcCCCcCCchHhhcCc--cHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 999999999999999999 9999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.7e-99 Score=729.26 Aligned_cols=298 Identities=56% Similarity=0.931 Sum_probs=287.5
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHhhCccchhhHHHHhhhcccccCCCceeeecCCCCCccccccCCCCCchhHHHHH
Q 018855 26 QLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVI 105 (349)
Q Consensus 26 ~l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I 105 (349)
||+++||++|||++|+||+++|++.+.++++++|++|||+||||||+||||||||++++++.+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 59999999999999999999999999999999999999999999999999999999887778999999998 67999999
Q ss_pred HHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhhhhccCCCCCCCCHHHHHHHHHHcCCCCc
Q 018855 106 DNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDK 185 (349)
Q Consensus 106 ~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~ 185 (349)
+.||+++|+.||++||||||||||||+||+.+|||.|+|++||+|+.++.+..+ +.||.|+.+++++++.|+++||+++
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999999999999999999998877655 7899999999999999999999999
Q ss_pred cceeeeccccccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchHHHHHhhhc
Q 018855 186 FDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLR 265 (349)
Q Consensus 186 ~elVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~nl~~~ 265 (349)
|||||+||||||++||.+|.+|||+|+|++.+||+||+.|+..|+..||...++.+.+++|+.||.+|||+||+||+.+
T Consensus 159 -d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~ 237 (298)
T cd00693 159 -DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237 (298)
T ss_pred -HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhc
Confidence 9999999999999999999999999999989999999999999999999765556678999999999999999999999
Q ss_pred CcccccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccccc
Q 018855 266 KGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRV 328 (349)
Q Consensus 266 ~gll~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~v 328 (349)
+|+|+|||+|+.|+ +|+++|++||.||+.|+++|+.||+||++++|+||.+||||++|++|
T Consensus 238 ~glL~SD~~L~~d~--~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 238 RGLLTSDQALLSDP--RTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCccCCHHhccCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999 99999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=2.4e-71 Score=517.09 Aligned_cols=229 Identities=49% Similarity=0.845 Sum_probs=210.1
Q ss_pred HHHHHHHHHhhCccchhhHHHHhhhcccc-cCCCceeeecCCCCCccccccCCCCCchhHHHHHHHHHHHHHHhcCCCCc
Q 018855 43 IEDVLKKAFSSDIRIGASLIRLHFHDCFV-DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVS 121 (349)
Q Consensus 43 Vr~~v~~~~~~~~~~aa~lLRL~FHDcfv-~GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I~~iK~~le~~cp~~VS 121 (349)
||++|++.+.++++++|+||||+|||||+ +|||||||+. ..|+++++|.++.+|+++|+.||+++|+.||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 89999999999999999999999999999 9999999983 47999999996656999999999999999999999
Q ss_pred HHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhhhhccCCCCCCCCHHHHHHHHHHcCCCCccceeeecccccccccc
Q 018855 122 CADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALSGAHTFGRAQ 201 (349)
Q Consensus 122 cADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~~elVaLsGaHTiG~ah 201 (349)
|||||+||||+||+.+|||.|+|++||+|+.+++..++ .+||.|+.+++++++.|+++||+++ |||||+||||||++|
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~-e~VaLsGaHTiG~~~ 153 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAE-EMVALSGAHTIGRAH 153 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HH-HHHHHHGGGGSTEES
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchh-hhcceecccccccce
Confidence 99999999999999999999999999999999999877 7899999999999999999999999 999999999999999
Q ss_pred ccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchHHHHHhhhcCcccccchhhccCCcc
Q 018855 202 CKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA 281 (349)
Q Consensus 202 c~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~nl~~~~gll~SD~~L~~d~~~ 281 (349)
|.+|. ||| + .+||+||+.|+.. .| ..++++ .+++| ||.+|||+||++|++++|+|.||++|+.|+
T Consensus 154 c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~-- 218 (230)
T PF00141_consen 154 CSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDP-- 218 (230)
T ss_dssp GGCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHST--
T ss_pred ecccc-ccc-c----cccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCH--
Confidence 99999 999 5 5799999999988 99 433333 77889 999999999999999999999999999999
Q ss_pred chHHHHHHhhcC
Q 018855 282 DTAAIVEDFGRN 293 (349)
Q Consensus 282 ~t~~~V~~yA~d 293 (349)
+|+++|++||+|
T Consensus 219 ~t~~~V~~yA~d 230 (230)
T PF00141_consen 219 ETRPIVERYAQD 230 (230)
T ss_dssp THHHHHHHHHHT
T ss_pred HHHHHHHHHhcC
Confidence 999999999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.7e-68 Score=509.39 Aligned_cols=232 Identities=29% Similarity=0.471 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHhhCccchhhHHHHhhhccc-------ccCCCceeeecCCCCCccccccCCCCCchhHHHHHHHHHHHHH
Q 018855 41 NIIEDVLKKAFSSDIRIGASLIRLHFHDCF-------VDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVE 113 (349)
Q Consensus 41 ~iVr~~v~~~~~~~~~~aa~lLRL~FHDcf-------v~GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I~~iK~~le 113 (349)
+.+|++|. .+.++|.++|.+|||+||||| ++||||||+++ +|+++++|.++.+||++|+.||+++
T Consensus 15 ~~~~~~~~-~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDLR-ALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHHH-HHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 45667774 467799999999999999999 89999999984 6999999996557999999999987
Q ss_pred HhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhhhhccCCCCCCCCHHHHHHHHHHcCCCCccceeeecc
Q 018855 114 KACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALSG 193 (349)
Q Consensus 114 ~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~~elVaLsG 193 (349)
++|||||||+||||+||+.+|||.|+|++||+|++++++ +++||+|+.+++++++.|+++||+++ |||+|+|
T Consensus 87 ----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~-D~VaLsG 158 (289)
T PLN02608 87 ----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDK-DIVALSG 158 (289)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHH-HHhhhcc
Confidence 489999999999999999999999999999999999863 46899999999999999999999999 9999999
Q ss_pred ccccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchHHHHHhhhc--Ccc--c
Q 018855 194 AHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLR--KGL--L 269 (349)
Q Consensus 194 aHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~nl~~~--~gl--l 269 (349)
|||||++||. |+ +|.|. ++ .||.+|||+||+|++.+ +|+ |
T Consensus 159 AHTiG~ahc~----r~-g~~g~------------------------------~~-~Tp~~FDN~Yy~~ll~~~~~gll~L 202 (289)
T PLN02608 159 GHTLGRAHPE----RS-GFDGP------------------------------WT-KEPLKFDNSYFVELLKGESEGLLKL 202 (289)
T ss_pred cccccccccc----CC-CCCCC------------------------------CC-CCCCccChHHHHHHHcCCcCCcccc
Confidence 9999999994 54 43221 11 68999999999999998 788 7
Q ss_pred ccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCCCCCCccccccc
Q 018855 270 QSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCR 326 (349)
Q Consensus 270 ~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 326 (349)
+||++|+.|+ +|+++|+.||.|++.|+++|+.||+||++|+|+||++||+.+.-+
T Consensus 203 ~SD~~L~~d~--~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 203 PTDKALLEDP--EFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred ccCHhhhcCh--hHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 9999999999 999999999999999999999999999999999999999987543
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=5.1e-66 Score=486.72 Aligned_cols=230 Identities=27% Similarity=0.417 Sum_probs=208.3
Q ss_pred hHHHHHHHHHHHHHhhCccchhhHHHHhhhcccccCCCceeeecC---CCCCccccccCCCCCchhHHHHHHHHHHHHHH
Q 018855 38 NVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDS---TNTIDSEKFAAPNNNSARGFEVIDNMKAAVEK 114 (349)
Q Consensus 38 ~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~GcDgSill~~---~~~~~~E~~~~~N~~~~rg~~~I~~iK~~le~ 114 (349)
..++|||++|++.+. +++++|++|||+|||||+ ||+|+++++ +..+.+|+++++|.++.+||++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 567899999999999 999999999999999994 777777643 333457999999996669999999999986
Q ss_pred hcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhhhhccCCCCCCCCHHHHHHHHHHcCCCCccceeeeccc
Q 018855 115 ACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALSGA 194 (349)
Q Consensus 115 ~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~~elVaLsGa 194 (349)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.++++++++|+++||+++ |||+|+||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~-d~VaLsGa 161 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQ-EIVALSGA 161 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHH-HHHHhccc
Confidence 4 8999999999999999999999999999999999998777778899999999999999999999999 99999999
Q ss_pred cccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchHHHHHhhhcCc-------
Q 018855 195 HTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKG------- 267 (349)
Q Consensus 195 HTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~nl~~~~g------- 267 (349)
||||++||.. ++|.|+ |..||.+|||+||+||+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~-------------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP-------------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCCC-------------------------------CCCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999953 233221 115899999999999999999
Q ss_pred -ccccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCC
Q 018855 268 -LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPL 314 (349)
Q Consensus 268 -ll~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 314 (349)
+|+||++|+.|+ +|+++|+.||.|++.|+++|++||+||+++||.
T Consensus 206 ~~L~sD~~L~~d~--~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 206 LMLPTDKALLEDP--KFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred eechhhHHHHcCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999 999999999999999999999999999999985
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=2.6e-64 Score=473.78 Aligned_cols=231 Identities=29% Similarity=0.518 Sum_probs=207.9
Q ss_pred cccc--CCChhHHHHHHHHHHHHHhhCccchhhHHHHhhh-----ccccc--CCCceeeecCCCCCccccccCCCCCchh
Q 018855 30 SFYS--STCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFH-----DCFVD--GCDASILLDSTNTIDSEKFAAPNNNSAR 100 (349)
Q Consensus 30 ~fY~--~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FH-----Dcfv~--GcDgSill~~~~~~~~E~~~~~N~~~~r 100 (349)
+||. +-|+.+++.|+..+++.+ .+++++|.||||+|| ||+++ ||||||.. .+|+++++|.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 5665 348899999999999988 789999999999999 88876 99999944 46999999997669
Q ss_pred HHHHHHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhhhhccCCCCCCCCHHHHHHHHHH-
Q 018855 101 GFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRN- 179 (349)
Q Consensus 101 g~~~I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~- 179 (349)
||++|+.||+++ ++|||||||+||||+||+.+|||.|+|++||+|+++++. .++||.|+.++++|++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHh
Confidence 999999999998 589999999999999999999999999999999999864 46799999999999999997
Q ss_pred cCCCCccceeeeccccccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchHHH
Q 018855 180 VGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYF 259 (349)
Q Consensus 180 ~Gls~~~elVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy 259 (349)
+||+++ |||+|+||||||++|| .|+ +|.|. ++ .||.+|||+||
T Consensus 149 ~Gl~~~-d~VaLsGaHTiG~~hc----~r~-~~~g~------------------------------~~-~tp~~fDn~Yy 191 (250)
T PLN02364 149 MGLSDK-DIVALSGAHTLGRCHK----DRS-GFEGA------------------------------WT-SNPLIFDNSYF 191 (250)
T ss_pred cCCCHH-HheeeecceeeccccC----CCC-CCCCC------------------------------CC-CCCCccchHHH
Confidence 699999 9999999999999999 354 43221 11 68999999999
Q ss_pred HHhhhc--Ccccc--cchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCC
Q 018855 260 SNLRLR--KGLLQ--SDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPL 314 (349)
Q Consensus 260 ~nl~~~--~gll~--SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 314 (349)
++|+.+ +|+|. ||++|+.|+ +|+.+|+.||.|++.|+++|++||+||++||+-
T Consensus 192 ~~ll~~~~~gll~l~sD~~L~~d~--~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 192 KELLSGEKEGLLQLVSDKALLDDP--VFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHhcCCcCCCccccchHHHccCc--hHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999998 89875 999999999 999999999999999999999999999999973
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.3e-62 Score=476.46 Aligned_cols=239 Identities=27% Similarity=0.372 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHHhhCcc---chhhHHHHhhhcccc------------cCCCceeeecCCCCCccccccCCCCCchhHHH
Q 018855 39 VLNIIEDVLKKAFSSDIR---IGASLIRLHFHDCFV------------DGCDASILLDSTNTIDSEKFAAPNNNSARGFE 103 (349)
Q Consensus 39 ~e~iVr~~v~~~~~~~~~---~aa~lLRL~FHDcfv------------~GcDgSill~~~~~~~~E~~~~~N~~~~rg~~ 103 (349)
+|..|+++|++.+..+.. .|+.+|||+||||++ +|||||||++.+ .|+++++|.+ ++ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~g-L~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIG-LD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCC-HH--H
Confidence 588999999999986544 577799999999996 799999999742 6999999984 44 8
Q ss_pred HHHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhh-cCCCceeecCCCCCCCcchhhhhccCCCCCCCCHHHHHHHHHHcCC
Q 018855 104 VIDNMKAAVEKACRRVVSCADILTIAAERSVAL-SGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGL 182 (349)
Q Consensus 104 ~I~~iK~~le~~cp~~VScADilalAar~AV~~-~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gl 182 (349)
+|+.||..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 99999999999999996 59999999999999999864 45799999999999999999999
Q ss_pred CCccceeeeccccccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchHHHHHh
Q 018855 183 NDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNL 262 (349)
Q Consensus 183 s~~~elVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~nl 262 (349)
+++ |||+|+||||||++|. .||+++ ..++| .||.+|||+||+|+
T Consensus 163 ~~~-E~VaLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~l 206 (328)
T cd00692 163 SPD-ELVALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFFIET 206 (328)
T ss_pred CHH-HHhhhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHHHHH
Confidence 999 9999999999999982 366664 14578 69999999999998
Q ss_pred h-hcCc-------------------ccccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCCCCCCccc
Q 018855 263 R-LRKG-------------------LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIR 322 (349)
Q Consensus 263 ~-~~~g-------------------ll~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR 322 (349)
+ .+++ +|+||++|+.|+ +|+.+|++||+||+.|+++|++||+||++|||.. ..+
T Consensus 207 l~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~--~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~~----~~l 280 (328)
T cd00692 207 LLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDP--RTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQDN----ISL 280 (328)
T ss_pred HHcCCCCCCccccccccccCccccccccchHHHhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCc----chh
Confidence 7 4555 499999999999 9999999999999999999999999999999874 478
Q ss_pred cccccccCCC
Q 018855 323 LNCRRVNGNN 332 (349)
Q Consensus 323 ~~C~~vn~~~ 332 (349)
.+|+.|++..
T Consensus 281 ~dcs~v~p~~ 290 (328)
T cd00692 281 TDCSDVIPPP 290 (328)
T ss_pred ccCcccCCCC
Confidence 8999999653
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=3.7e-62 Score=458.59 Aligned_cols=221 Identities=28% Similarity=0.479 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHHhhCccchhhHHHHhhhcccc-------cCCCceeeecCCCCCccccccCCCCCchhHHHHHHHHHHHH
Q 018855 40 LNIIEDVLKKAFSSDIRIGASLIRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAV 112 (349)
Q Consensus 40 e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I~~iK~~l 112 (349)
.+-++..+.+.+ .+...+|.+|||+||||.+ +||||||++. .|+++++|.++..++++|+.||+++
T Consensus 17 ~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~~ 89 (251)
T PLN02879 17 VQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHHc
Confidence 345677888876 4679999999999999964 8999999763 6999999997666999999999987
Q ss_pred HHhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhhhhccCCCCCCCCHHHHHHHHHHcCCCCccceeeec
Q 018855 113 EKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALS 192 (349)
Q Consensus 113 e~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~~elVaLs 192 (349)
++|||||||+||||+||+.+|||.|+|++||+|+.++.+ +++||.|+.+++++++.|+++||+++ |||||+
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~-dlVALs 160 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDK-DIVALS 160 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHH-HHeeee
Confidence 589999999999999999999999999999999998854 46899999999999999999999999 999999
Q ss_pred cccccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchHHHHHhhhc--Ccc--
Q 018855 193 GAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLR--KGL-- 268 (349)
Q Consensus 193 GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~nl~~~--~gl-- 268 (349)
||||||++||. | ++|.|. +| .||.+|||+||++|+.+ +|+
T Consensus 161 GaHTiG~ah~~----r-~g~~g~------------------------------~d-~tp~~FDN~Yy~~ll~~~~~gll~ 204 (251)
T PLN02879 161 GGHTLGRCHKE----R-SGFEGA------------------------------WT-PNPLIFDNSYFKEILSGEKEGLLQ 204 (251)
T ss_pred ccccccccccc----c-ccCCCC------------------------------CC-CCccceeHHHHHHHHcCCcCCCcc
Confidence 99999999995 3 344321 22 58999999999999998 888
Q ss_pred cccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCC
Q 018855 269 LQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPL 314 (349)
Q Consensus 269 l~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 314 (349)
|+||++|+.|+ +|+++|++||.||+.|+++|+.||+||++||+.
T Consensus 205 L~SD~aL~~D~--~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 205 LPTDKALLDDP--LFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred chhhHHHhcCC--cHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 67999999999 999999999999999999999999999999975
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=1.1e-58 Score=437.44 Aligned_cols=224 Identities=33% Similarity=0.514 Sum_probs=206.0
Q ss_pred HHHHHHHHHHhhCccchhhHHHHhhhccccc--------CCCceeeecCCCCCccccccCCCCCchhHHHHHHHHHHHHH
Q 018855 42 IIEDVLKKAFSSDIRIGASLIRLHFHDCFVD--------GCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVE 113 (349)
Q Consensus 42 iVr~~v~~~~~~~~~~aa~lLRL~FHDcfv~--------GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I~~iK~~le 113 (349)
.|++.|++.+.+++++++++|||+||||++. ||||||+++ +|+++++|.++.+++++|+.||+++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999996 999999997 39999999977899999999999999
Q ss_pred HhcCCCCcHHHHHHHhhhhHhhhc--CCCceeecCCCCCCCcch--hhhhccCCCCCCCCHHHHHHHHHHcCCCCcccee
Q 018855 114 KACRRVVSCADILTIAAERSVALS--GGPSWAVPLGRRDSRTAN--RALANQNLPGPSNSLDELKSSFRNVGLNDKFDLV 189 (349)
Q Consensus 114 ~~cp~~VScADilalAar~AV~~~--GGP~~~v~~GRrD~~~s~--~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~~elV 189 (349)
. |++|||||||+||+++||+.+ |||.|+|++||+|+..+. ...+...+|.|..+++++++.|.++||+++ |||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~-e~V 152 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPS-ELV 152 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHH-HHH
Confidence 8 899999999999999999999 999999999999999764 223345688888899999999999999999 999
Q ss_pred eec-ccccc-ccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchHHHHHhhhcC-
Q 018855 190 ALS-GAHTF-GRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRK- 266 (349)
Q Consensus 190 aLs-GaHTi-G~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~nl~~~~- 266 (349)
||+ ||||| |++||..|..|+ | .+|+.||.+|||+||++++.++
T Consensus 153 AL~~GaHti~G~~~~~~~~~~~------------------------~----------~~~~~tp~~fDN~yy~~l~~~~~ 198 (255)
T cd00314 153 ALSAGAHTLGGKNHGDLLNYEG------------------------S----------GLWTSTPFTFDNAYFKNLLDMNW 198 (255)
T ss_pred hhccCCeeccCcccCCCCCccc------------------------C----------CCCCCCCCccchHHHHHHhcCCc
Confidence 999 99999 999998777664 2 1344799999999999999988
Q ss_pred ---------------cccccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhc
Q 018855 267 ---------------GLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGN 310 (349)
Q Consensus 267 ---------------gll~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 310 (349)
++|+||++|+.|+ +|+.+|+.||.|++.|+++|++||+||++
T Consensus 199 ~~~~~~~~~~~~~~~~~l~sD~~L~~d~--~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 199 EWRVGSPDPDGVKGPGLLPSDYALLSDS--ETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred ccccCCccCCCcccCCCchhhHHHhcCH--hHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 8999999999999 99999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=2.1e-55 Score=432.76 Aligned_cols=259 Identities=20% Similarity=0.331 Sum_probs=228.6
Q ss_pred HHHHHHHHHHHhhC--------ccchhhHHHHhhhcccc-------cCCC-ceeeecCCCCCccccccCCCCCchhHHHH
Q 018855 41 NIIEDVLKKAFSSD--------IRIGASLIRLHFHDCFV-------DGCD-ASILLDSTNTIDSEKFAAPNNNSARGFEV 104 (349)
Q Consensus 41 ~iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GcD-gSill~~~~~~~~E~~~~~N~~~~rg~~~ 104 (349)
+.|+++|++.+... ...+|.+|||+|||+.+ +|++ |+|.+. +|++++.|.++.+++.+
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL~~a~~~ 118 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNLDKARRL 118 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhHHHHHHH
Confidence 68999999999864 37999999999999986 7886 788764 69999999988899999
Q ss_pred HHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhh---------------------------
Q 018855 105 IDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRA--------------------------- 157 (349)
Q Consensus 105 I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~--------------------------- 157 (349)
++.||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 119 L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a 194 (409)
T cd00649 119 LWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAA 194 (409)
T ss_pred HHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhh
Confidence 99999987 34799999999999999999999999999999999754320
Q ss_pred ----------hhccCCCCCCCCHHHHHHHHHHcCCCCccceeee-ccccccccccccccccccccCCCCCCCCCcccHHH
Q 018855 158 ----------LANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL-SGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTL 226 (349)
Q Consensus 158 ----------~a~~~lP~p~~~~~~l~~~F~~~Gls~~~elVaL-sGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~ 226 (349)
+....||+|..++.+|++.|.+|||+++ ||||| +||||||++||..|.+||. +||.+++.|
T Consensus 195 ~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~-E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~~~~ 266 (409)
T cd00649 195 VQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASHVG-------PEPEAAPIE 266 (409)
T ss_pred hhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHH-HHeeeccCCcceeecCcccccccCC-------CCCCcCHHH
Confidence 1122699999999999999999999999 99999 5999999999999999982 699999999
Q ss_pred HHHHH--hhCCCCCC-CCcccccC---CCCCCccchHHHHHhhh------------------------------------
Q 018855 227 LKQLR--ELCPQGGN-GAVLANFD---VKTPDAFDNKYFSNLRL------------------------------------ 264 (349)
Q Consensus 227 ~~~L~--~~Cp~~~~-~~~~~~lD---~~tp~~FDN~Yy~nl~~------------------------------------ 264 (349)
++.|. +.||...+ +...+.+| +.||.+|||+||++|+.
T Consensus 267 ~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~ 346 (409)
T cd00649 267 QQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKH 346 (409)
T ss_pred HHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCcccccccc
Confidence 99995 89997543 33455788 58999999999999998
Q ss_pred cCcccccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHh--hcCCCCCCCCC
Q 018855 265 RKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRM--GNLKPLTGNQG 319 (349)
Q Consensus 265 ~~gll~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 319 (349)
+++||+||++|+.|+ +|+++|++||.|+++|+++|++||+|| +.+||++--.|
T Consensus 347 ~~gmL~SD~aL~~Dp--~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 347 APMMLTTDLALRFDP--EYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred CcccchhhHhhhcCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 569999999999999 999999999999999999999999999 68999875444
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.2e-52 Score=436.70 Aligned_cols=255 Identities=21% Similarity=0.308 Sum_probs=223.2
Q ss_pred HHHHHHHHHHHhhC--------ccchhhHHHHhhhcccc-------cCC-CceeeecCCCCCccccccCCCCCchhHHHH
Q 018855 41 NIIEDVLKKAFSSD--------IRIGASLIRLHFHDCFV-------DGC-DASILLDSTNTIDSEKFAAPNNNSARGFEV 104 (349)
Q Consensus 41 ~iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~Gc-DgSill~~~~~~~~E~~~~~N~~~~rg~~~ 104 (349)
+.||++|++.+... ...+|.+|||+||++.+ +|| .|+|.+. +|++|+.|.++.+++.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------PLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------cccCchhhhhHHHHHHH
Confidence 57999999999874 36899999999999986 688 4788764 79999999988899999
Q ss_pred HHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchh--------------------------h-
Q 018855 105 IDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANR--------------------------A- 157 (349)
Q Consensus 105 I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~--------------------------~- 157 (349)
++.||+ .||++|||||||+||+++||+.+|||.|+|.+||+|+..+.. .
T Consensus 129 L~pIk~----kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 129 LWPIKK----KYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHH----HCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 999987 489999999999999999999999999999999999943210 0
Q ss_pred ---------hhccCCCCCCCCHHHHHHHHHHcCCCCccceeeec-cccccccccccccccccccCCCCCCCCCcccHHHH
Q 018855 158 ---------LANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALS-GAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLL 227 (349)
Q Consensus 158 ---------~a~~~lP~p~~~~~~l~~~F~~~Gls~~~elVaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~ 227 (349)
+....+|+|..++.+|++.|.+||||++ |||||+ ||||||++||.+|.+|| ++||++++.|+
T Consensus 205 ~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~-EmVALiaGaHTiGkaHc~s~~~rl-------g~dP~~~~~~~ 276 (716)
T TIGR00198 205 EMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDE-ETVALIAGGHTVGKCHGAGPAELI-------GPDPEGAPIEE 276 (716)
T ss_pred hccccccCcccccCCCCCCCCHHHHHHHHHHcCCChH-HHeeeecCceeccccCCCcccccC-------CCCCCcCHHHH
Confidence 1122699999999999999999999999 999995 99999999999999998 27999999999
Q ss_pred HHHHhhCCCCC--C-CCcccccC---CCCCCccchHHHHHhhhc----------------------------------Cc
Q 018855 228 KQLRELCPQGG--N-GAVLANFD---VKTPDAFDNKYFSNLRLR----------------------------------KG 267 (349)
Q Consensus 228 ~~L~~~Cp~~~--~-~~~~~~lD---~~tp~~FDN~Yy~nl~~~----------------------------------~g 267 (349)
+.|+..||... + +...+.+| +.||.+|||+||+||+.. .+
T Consensus 277 ~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~ 356 (716)
T TIGR00198 277 QGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPI 356 (716)
T ss_pred HHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccC
Confidence 99999998532 2 23346677 579999999999999974 68
Q ss_pred ccccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhh--cCCCCC
Q 018855 268 LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMG--NLKPLT 315 (349)
Q Consensus 268 ll~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~t 315 (349)
+|+||++|..|+ +|+++|++||.|++.|+++|++||+||+ .+|++.
T Consensus 357 mL~SDlaL~~Dp--~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~ 404 (716)
T TIGR00198 357 MLDADLALRFDP--EFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKS 404 (716)
T ss_pred ccchhHHhccCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchh
Confidence 999999999999 9999999999999999999999999999 466544
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=3.7e-49 Score=408.51 Aligned_cols=256 Identities=21% Similarity=0.333 Sum_probs=223.5
Q ss_pred HHHHHHHHHHHHhhC--------ccchhhHHHHhhhcccc-------cCCC-ceeeecCCCCCccccccCCCCCchhHHH
Q 018855 40 LNIIEDVLKKAFSSD--------IRIGASLIRLHFHDCFV-------DGCD-ASILLDSTNTIDSEKFAAPNNNSARGFE 103 (349)
Q Consensus 40 e~iVr~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GcD-gSill~~~~~~~~E~~~~~N~~~~rg~~ 103 (349)
.+.||++|.+.+... ...+|.+|||+||++.+ +||+ |+|.+. +|.+++.|.++.+++.
T Consensus 56 ~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------pe~~w~~N~gL~ka~~ 129 (726)
T PRK15061 56 LEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------PLNSWPDNVNLDKARR 129 (726)
T ss_pred HHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------ccccchhhhhHHHHHH
Confidence 357999999999864 37899999999999986 6886 788664 7999999998889999
Q ss_pred HHHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhh--------------------------
Q 018855 104 VIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRA-------------------------- 157 (349)
Q Consensus 104 ~I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~-------------------------- 157 (349)
+++.||+++ |..||.||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 130 ~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl 205 (726)
T PRK15061 130 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPL 205 (726)
T ss_pred HHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccch
Confidence 999999987 45799999999999999999999999999999998654321
Q ss_pred ------------hhccCCCCCCCCHHHHHHHHHHcCCCCccceeeec-cccccccccccccccccccCCCCCCCCCcccH
Q 018855 158 ------------LANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALS-GAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDR 224 (349)
Q Consensus 158 ------------~a~~~lP~p~~~~~~l~~~F~~~Gls~~~elVaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~ 224 (349)
+-+..+|+|..++.+|++.|.+|||+++ |||||+ ||||||++||..|.+|| .+||.+++
T Consensus 206 ~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDe-EtVALiaGgHT~GkaHca~~~~rl-------gpdP~~a~ 277 (726)
T PRK15061 206 AAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGDASHV-------GPEPEAAP 277 (726)
T ss_pred hhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHH-HheeeccCCceeeeCCCcCccccc-------CCCCCcCH
Confidence 0012379999999999999999999999 999995 99999999999999998 37999999
Q ss_pred HHHHHHH--hhCCCCCC-CCcccccC---CCCCCccchHHHHHhhhc---------------------------------
Q 018855 225 TLLKQLR--ELCPQGGN-GAVLANFD---VKTPDAFDNKYFSNLRLR--------------------------------- 265 (349)
Q Consensus 225 ~~~~~L~--~~Cp~~~~-~~~~~~lD---~~tp~~FDN~Yy~nl~~~--------------------------------- 265 (349)
.|++.|. +.||.+.+ +...+.+| ..||.+|||+||++|+.+
T Consensus 278 ~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~ 357 (726)
T PRK15061 278 IEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSK 357 (726)
T ss_pred HHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCccccccc
Confidence 9999985 99997533 33455677 679999999999999984
Q ss_pred ---CcccccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhc--CCCCC
Q 018855 266 ---KGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGN--LKPLT 315 (349)
Q Consensus 266 ---~gll~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~--lgv~t 315 (349)
.+||+||++|..|+ +++++|++||.|+++|+++|++||.||++ +|+++
T Consensus 358 ~~~~~MLtSD~AL~~DP--~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ 410 (726)
T PRK15061 358 KHAPTMLTTDLALRFDP--EYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKS 410 (726)
T ss_pred ccCcccccccHHhhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchh
Confidence 58999999999999 99999999999999999999999999955 66655
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=7.9e-50 Score=375.16 Aligned_cols=232 Identities=25% Similarity=0.346 Sum_probs=185.6
Q ss_pred CCcccccCCChhHHHHHHHHHHHHHhhCccchhhHHHHhhhccc-------ccCCCceeeecCCCCCccccc-cCCCCCc
Q 018855 27 LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCF-------VDGCDASILLDSTNTIDSEKF-AAPNNNS 98 (349)
Q Consensus 27 l~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~lLRL~FHDcf-------v~GcDgSill~~~~~~~~E~~-~~~N~~~ 98 (349)
++.+||.. ..-+.|...-......++++++.+|||+||||| ++||||||+++.. .+|+. .+.|. .
T Consensus 14 ~~~g~~~~---~f~~~v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~-~ 86 (264)
T cd08201 14 LQSGYSAR---GFVAGVTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNT-T 86 (264)
T ss_pred hcccceec---ccccccccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhh-c
Confidence 44555553 222334444445566789999999999999999 8999999999742 46776 44454 6
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchhhhhccCCCCCCCCHHHHHHHHH
Q 018855 99 ARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFR 178 (349)
Q Consensus 99 ~rg~~~I~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~ 178 (349)
+++|+.|+.+ +||||||||||+|+||+.+|||.|+|++||+|++++.+. .||.|+.++++|++.|+
T Consensus 87 l~~~~~i~~~----------~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa 152 (264)
T cd08201 87 LNFFVNFYSP----------RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFR 152 (264)
T ss_pred cccceeeccC----------ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHH
Confidence 7888877543 699999999999999999999999999999999988753 49999999999999999
Q ss_pred HcCCCCccceeeecc-ccccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCccchH
Q 018855 179 NVGLNDKFDLVALSG-AHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNK 257 (349)
Q Consensus 179 ~~Gls~~~elVaLsG-aHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~ 257 (349)
+|||+++ |||+|+| |||||++||..|.+++- |. ...+...++| .||.+|||+
T Consensus 153 ~~Gfs~~-DmVaLsggaHTiG~ahc~~f~~~~~---------~g----------------~~~~~~~p~d-stp~~FDn~ 205 (264)
T cd08201 153 RQGFSTS-EMIALVACGHTLGGVHSEDFPEIVP---------PG----------------SVPDTVLQFF-DTTIQFDNK 205 (264)
T ss_pred HcCCChH-HHheeecCCeeeeecccccchhhcC---------Cc----------------cccCCCCCCC-CCccccchH
Confidence 9999999 9999995 99999999998876641 10 0001134567 699999999
Q ss_pred HHHHhhhcCc----------ccccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhc
Q 018855 258 YFSNLRLRKG----------LLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGN 310 (349)
Q Consensus 258 Yy~nl~~~~g----------ll~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 310 (349)
||.+++.+.. .+.||..++...+|.| ++..| ++..|.+.++..+.||.+
T Consensus 206 ~f~E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~n~t---~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 206 VVTEYLSGTTNNPLVVGPNNTTNSDLRIFSSDGNVT---MNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred HHHHHhcCCCCCceeecCCCCccchhhheecCccHH---HHHhc-ChHHHHHHHHHHHHHHhC
Confidence 9999998642 4689999998775555 55666 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.6e-38 Score=302.18 Aligned_cols=221 Identities=19% Similarity=0.241 Sum_probs=180.2
Q ss_pred HHHHHHHhhCccchhhHHHHhhhcccc-------cCCCce-eeecCCCCCccccccCCCCC--chhHHHHHHHHHHHHHH
Q 018855 45 DVLKKAFSSDIRIGASLIRLHFHDCFV-------DGCDAS-ILLDSTNTIDSEKFAAPNNN--SARGFEVIDNMKAAVEK 114 (349)
Q Consensus 45 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~~--~~rg~~~I~~iK~~le~ 114 (349)
+.+++.+....-.++.||||+||++.+ +|++|+ |.| .+|++|+.|.+ +.+.+.+++.||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 567777787888999999999999976 799998 655 47999999998 77899999999999842
Q ss_pred h-cC-CCCcHHHHHHHhhhhHhhhcCC-----CceeecCCCCCCCcchhhhh--ccCCCCCCC------------CHHHH
Q 018855 115 A-CR-RVVSCADILTIAAERSVALSGG-----PSWAVPLGRRDSRTANRALA--NQNLPGPSN------------SLDEL 173 (349)
Q Consensus 115 ~-cp-~~VScADilalAar~AV~~~GG-----P~~~v~~GRrD~~~s~~~~a--~~~lP~p~~------------~~~~l 173 (349)
. -+ ..||.||+|+||+..|||.+|| |.|++.+||.|...+..... ...+|.+.. ..+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 1 12 2699999999999999999999 99999999999987643211 123454321 34679
Q ss_pred HHHHHHcCCCCccceeeecccc-ccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCC
Q 018855 174 KSSFRNVGLNDKFDLVALSGAH-TFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPD 252 (349)
Q Consensus 174 ~~~F~~~Gls~~~elVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~ 252 (349)
++.|.++||+++ |||||+||| ++|+.|..+ +.|. + ..+|.
T Consensus 171 rd~f~rlglsd~-EmvaL~Gg~r~lG~~~~~s-------~~G~-------------------------w------T~~p~ 211 (297)
T cd08200 171 VDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHGV-------------------------F------TDRPG 211 (297)
T ss_pred HHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCCC-------------------------C------cCCCC
Confidence 999999999999 999999997 699887432 1121 2 15799
Q ss_pred ccchHHHHHhhhc--------------------Cc-----ccccchhhccCCccchHHHHHHhhcC--HHHHHHHHHHHH
Q 018855 253 AFDNKYFSNLRLR--------------------KG-----LLQSDQELFSTPGADTAAIVEDFGRN--QTAFFKNFVISM 305 (349)
Q Consensus 253 ~FDN~Yy~nl~~~--------------------~g-----ll~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~Am 305 (349)
+|||.||+||+.- .| .+.+|..|..|+ +.|++|+.||.| ++.|++||++||
T Consensus 212 ~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~--~~R~~ve~YA~dd~~~~F~~DF~~A~ 289 (297)
T cd08200 212 VLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRAVAEVYASDDAQEKFVKDFVAAW 289 (297)
T ss_pred ccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCH--HHHHHHHHHhcccchhHHHHHHHHHH
Confidence 9999999999841 01 267899999999 999999999998 999999999999
Q ss_pred HHhhcCC
Q 018855 306 IRMGNLK 312 (349)
Q Consensus 306 ~Km~~lg 312 (349)
.||+++.
T Consensus 290 ~Klmeld 296 (297)
T cd08200 290 TKVMNLD 296 (297)
T ss_pred HHHHhcC
Confidence 9999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=2.5e-33 Score=292.38 Aligned_cols=221 Identities=20% Similarity=0.237 Sum_probs=176.5
Q ss_pred HHHHHHHH---HHhhCccchhhHHHHhhhcccc-------cCCCce-eeecCCCCCccccccCCC--CCchhHHHHHHHH
Q 018855 42 IIEDVLKK---AFSSDIRIGASLIRLHFHDCFV-------DGCDAS-ILLDSTNTIDSEKFAAPN--NNSARGFEVIDNM 108 (349)
Q Consensus 42 iVr~~v~~---~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N--~~~~rg~~~I~~i 108 (349)
+|+++|.. .+....-..+.|||++||++.+ +|++|+ |.|. +|++++.| .++.+.+++++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 34555555 3555667889999999999976 799998 7664 79999999 7788899999999
Q ss_pred HHHHHHhcCCCCcHHHHHHHhhhhHhhhc---CCC--ceeecCCCCCCCcchhhhhccCC---CCC------------CC
Q 018855 109 KAAVEKACRRVVSCADILTIAAERSVALS---GGP--SWAVPLGRRDSRTANRALANQNL---PGP------------SN 168 (349)
Q Consensus 109 K~~le~~cp~~VScADilalAar~AV~~~---GGP--~~~v~~GRrD~~~s~~~~a~~~l---P~p------------~~ 168 (349)
|+++.. +.||.||+|+||+..|||.+ ||| .+++.+||.|....... ++... |.+ ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td-~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTD-AESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCC-ccccccCCCCCcccchhccccccCC
Confidence 998742 27999999999999999999 898 57999999999876432 22222 211 12
Q ss_pred CHHHHHHHHHHcCCCCccceeeeccc-cccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccC
Q 018855 169 SLDELKSSFRNVGLNDKFDLVALSGA-HTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFD 247 (349)
Q Consensus 169 ~~~~l~~~F~~~Gls~~~elVaLsGa-HTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD 247 (349)
....|++.|.++||+++ |||||+|| |++|+.|..+ +.|. +
T Consensus 579 ~~~~l~d~a~~lglt~~-EmvaL~Gg~r~lG~~~~~s-------~~G~-------------------------~------ 619 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAP-EMTVLIGGMRVLGANHGGS-------KHGV-------------------------F------ 619 (716)
T ss_pred HHHHHHHHHHhCCCChH-HHHheecchhhccccCCCC-------CCCC-------------------------C------
Confidence 35668999999999999 99999999 5999998532 1121 1
Q ss_pred CCCCCccchHHHHHhhhcC--------------------c---cc--ccchhhccCCccchHHHHHHhhcCH--HHHHHH
Q 018855 248 VKTPDAFDNKYFSNLRLRK--------------------G---LL--QSDQELFSTPGADTAAIVEDFGRNQ--TAFFKN 300 (349)
Q Consensus 248 ~~tp~~FDN~Yy~nl~~~~--------------------g---ll--~SD~~L~~d~~~~t~~~V~~yA~d~--~~F~~~ 300 (349)
..+|.+|||.||+||+... | ++ .+|..|..|+ +.|++|+.||+|+ +.|++|
T Consensus 620 T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~--~lra~aE~YA~dd~~~~F~~D 697 (716)
T TIGR00198 620 TDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNS--ILRAVAEVYAQDDAREKFVKD 697 (716)
T ss_pred cCCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCH--HHHHHHHHHhcccccchHHHH
Confidence 1578999999999998610 1 22 6799999999 9999999999997 899999
Q ss_pred HHHHHHHhhcCCC
Q 018855 301 FVISMIRMGNLKP 313 (349)
Q Consensus 301 Fa~Am~Km~~lgv 313 (349)
|++||.|+++++-
T Consensus 698 F~~Aw~Klm~ldr 710 (716)
T TIGR00198 698 FVAAWTKVMNLDR 710 (716)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999984
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=8e-33 Score=287.19 Aligned_cols=222 Identities=19% Similarity=0.255 Sum_probs=181.2
Q ss_pred HHHHHHHhhCccchhhHHHHhhhcccc-------cCCCce-eeecCCCCCccccccCCCC--CchhHHHHHHHHHHHHHH
Q 018855 45 DVLKKAFSSDIRIGASLIRLHFHDCFV-------DGCDAS-ILLDSTNTIDSEKFAAPNN--NSARGFEVIDNMKAAVEK 114 (349)
Q Consensus 45 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDgS-ill~~~~~~~~E~~~~~N~--~~~rg~~~I~~iK~~le~ 114 (349)
..+++.+....-..+.|||++||++.+ +|++|+ |.|. +|++++.|. ++.+.+++++.||++...
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 567777777778899999999999975 799998 7775 799999999 778899999999999864
Q ss_pred hc--CCCCcHHHHHHHhhhhHhhhc---CC--CceeecCCCCCCCcchhhhh--ccCCCCCC------------CCHHHH
Q 018855 115 AC--RRVVSCADILTIAAERSVALS---GG--PSWAVPLGRRDSRTANRALA--NQNLPGPS------------NSLDEL 173 (349)
Q Consensus 115 ~c--p~~VScADilalAar~AV~~~---GG--P~~~v~~GRrD~~~s~~~~a--~~~lP~p~------------~~~~~l 173 (349)
.- ...||.||+|+||+..|||.+ || |.|++.+||.|.+....... ...+|.+. .....|
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td~esf~~l~P~Adgfrny~~~~~~~~~e~~L 595 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTDVESFAVLEPKADGFRNYLKKGYSVSPEELL 595 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCCcccccccCCCCccccccccccCCCCHHHHH
Confidence 32 136999999999999999999 68 99999999999987643211 12456543 134779
Q ss_pred HHHHHHcCCCCccceeeecccc-ccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCC
Q 018855 174 KSSFRNVGLNDKFDLVALSGAH-TFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPD 252 (349)
Q Consensus 174 ~~~F~~~Gls~~~elVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~ 252 (349)
++.|.++||+++ |||||+||| ++|..|..+ +.|. + ..+|.
T Consensus 596 ~d~a~~lglt~~-EmvaL~Gg~r~Lg~~~~~S-------~~G~-------------------------~------T~~p~ 636 (726)
T PRK15061 596 VDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHGV-------------------------F------TDRPG 636 (726)
T ss_pred HHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCCC-------------------------C------cCCCC
Confidence 999999999999 999999997 788887432 1121 1 15799
Q ss_pred ccchHHHHHhhhc----------C----------c---c--cccchhhccCCccchHHHHHHhhcC--HHHHHHHHHHHH
Q 018855 253 AFDNKYFSNLRLR----------K----------G---L--LQSDQELFSTPGADTAAIVEDFGRN--QTAFFKNFVISM 305 (349)
Q Consensus 253 ~FDN~Yy~nl~~~----------~----------g---l--l~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~Am 305 (349)
+|||.||+||+.- . | + +.+|..|..|+ +.|++|+.||+| ++.|++||++||
T Consensus 637 ~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds--~lRa~aEvYA~dd~~~kF~~DF~~Aw 714 (726)
T PRK15061 637 VLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNS--QLRALAEVYASDDAKEKFVRDFVAAW 714 (726)
T ss_pred ccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCH--HHHHHHHHHhcccchhHHHHHHHHHH
Confidence 9999999999841 1 1 1 47899999999 999999999999 999999999999
Q ss_pred HHhhcCCC
Q 018855 306 IRMGNLKP 313 (349)
Q Consensus 306 ~Km~~lgv 313 (349)
.|+++++-
T Consensus 715 ~Kvmeldr 722 (726)
T PRK15061 715 TKVMNLDR 722 (726)
T ss_pred HHHHhCCC
Confidence 99999873
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.4e-29 Score=252.52 Aligned_cols=252 Identities=20% Similarity=0.308 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHhhCc--------cchhhHHHHhhhcccc-------cCCCceeeecCCCCCccccccCCCCCchhHHHHH
Q 018855 41 NIIEDVLKKAFSSDI--------RIGASLIRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVI 105 (349)
Q Consensus 41 ~iVr~~v~~~~~~~~--------~~aa~lLRL~FHDcfv-------~GcDgSill~~~~~~~~E~~~~~N~~~~rg~~~I 105 (349)
..|+..+...+.... ..+|.+|||+||-+.+ +|..+- ..++.++.++|.|.++.+++.++
T Consensus 70 ~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G-----~qRFaPlnSWPDN~nLDKarRLL 144 (730)
T COG0376 70 AAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGG-----QQRFAPLNSWPDNANLDKARRLL 144 (730)
T ss_pred HHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCC-----ceecccccCCCcccchHHHHHHh
Confidence 356667776666542 4799999999999986 333321 23456889999999999999999
Q ss_pred HHHHHHHHHhcCCCCcHHHHHHHhhhhHhhhcCCCceeecCCCCCCCcchh-----------------------------
Q 018855 106 DNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANR----------------------------- 156 (349)
Q Consensus 106 ~~iK~~le~~cp~~VScADilalAar~AV~~~GGP~~~v~~GRrD~~~s~~----------------------------- 156 (349)
..||+++ +..+|.||+|+|++..|++.+|++.+.+..||.|--.+..
T Consensus 145 WPIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaav 220 (730)
T COG0376 145 WPIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAV 220 (730)
T ss_pred hhHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhh
Confidence 9999987 4689999999999999999999999999999999766654
Q ss_pred ---------hhhccCCCCCCCCHHHHHHHHHHcCCCCccceeeec-cccccccccccccccccccCCCCCCCCCcccHHH
Q 018855 157 ---------ALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALS-GAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTL 226 (349)
Q Consensus 157 ---------~~a~~~lP~p~~~~~~l~~~F~~~Gls~~~elVaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~ 226 (349)
.. ++..|+|..+..+++..|++|+|+++ |.|||+ ||||+|++|...-.+.+ +++|.-.+--
T Consensus 221 qMGLIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDe-ETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie 291 (730)
T COG0376 221 QMGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIE 291 (730)
T ss_pred eeeeEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcH-hhhhhhhcccccccccCCCchhhc-------CCCccccchh
Confidence 11 24578899999999999999999999 999999 69999999976422221 3566555444
Q ss_pred HHHH--HhhCCCCCCCCcc----cccCCCCCCccchHHHHHhhhc-----------------------------------
Q 018855 227 LKQL--RELCPQGGNGAVL----ANFDVKTPDAFDNKYFSNLRLR----------------------------------- 265 (349)
Q Consensus 227 ~~~L--~~~Cp~~~~~~~~----~~lD~~tp~~FDN~Yy~nl~~~----------------------------------- 265 (349)
.+.| ++.|..+.+..++ ...+..||++|||+||.+|...
T Consensus 292 ~qGlGW~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~ 371 (730)
T COG0376 292 QQGLGWANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHG 371 (730)
T ss_pred hhccccccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccC
Confidence 4444 3445443332222 2234579999999999999852
Q ss_pred CcccccchhhccCCccchHHHHHHhhcCHHHHHHHHHHHHHHhhcCC
Q 018855 266 KGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLK 312 (349)
Q Consensus 266 ~gll~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 312 (349)
..||++|.+|.-|| ..++|.++|..|++.|.+.|++||-||.+-+
T Consensus 372 p~MlttDlaLr~DP--~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 372 PMMLTTDLALRFDP--EYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred ceeeccchhhhcCh--HHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 15899999999999 9999999999999999999999999998754
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.45 E-value=1.2e-12 Score=132.11 Aligned_cols=217 Identities=20% Similarity=0.251 Sum_probs=155.3
Q ss_pred HHHHHHHhhCccchhhHHHHhhhcccc-------cCCCc-eeeecCCCCCccccccCCCCC--chhHHHHHHHHHHHHHH
Q 018855 45 DVLKKAFSSDIRIGASLIRLHFHDCFV-------DGCDA-SILLDSTNTIDSEKFAAPNNN--SARGFEVIDNMKAAVEK 114 (349)
Q Consensus 45 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GcDg-Sill~~~~~~~~E~~~~~N~~--~~rg~~~I~~iK~~le~ 114 (349)
..++..+....-....|+-.+|-.+-+ +|.+| .|.|. ++|+|+.|.. +.+-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 467777777778889999999998865 56665 56664 6899999964 3467888899988876
Q ss_pred hcCCCCcHHHHHHHhhhhHhhhc---CCCc--eeecCCCCCCCcchhhhhcc--CCCCC------------CCCHHHHHH
Q 018855 115 ACRRVVSCADILTIAAERSVALS---GGPS--WAVPLGRRDSRTANRALANQ--NLPGP------------SNSLDELKS 175 (349)
Q Consensus 115 ~cp~~VScADilalAar~AV~~~---GGP~--~~v~~GRrD~~~s~~~~a~~--~lP~p------------~~~~~~l~~ 175 (349)
..||.||+|+|++..+|+.+ +|-. +|+..||.|........... .-|-. .....-|++
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 47999999999999999986 5654 57789999997765331111 11211 112344788
Q ss_pred HHHHcCCCCccceeeecccc-ccccccccccccccccCCCCCCCCCcccHHHHHHHHhhCCCCCCCCcccccCCCCCCcc
Q 018855 176 SFRNVGLNDKFDLVALSGAH-TFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAF 254 (349)
Q Consensus 176 ~F~~~Gls~~~elVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~F 254 (349)
+-+-.+|+.. ||++|.|+- -+|..+. |+ ...+.-| .|..+
T Consensus 602 kAqlL~Ltap-emtVLiGGlRvLg~n~g-----------~s-------------------------~~GVfT~--~pg~L 642 (730)
T COG0376 602 KAQLLTLTAP-EMTVLIGGLRVLGANYG-----------GS-------------------------KHGVFTD--RPGVL 642 (730)
T ss_pred HHHHhccCCc-cceEEEcceEeeccCCC-----------CC-------------------------ccceecc--Ccccc
Confidence 8888999998 999999874 3332221 10 1112222 56777
Q ss_pred chHHHHHhhh--------------------cCcc-----cccchhhccCCccchHHHHHHhhcC--HHHHHHHHHHHHHH
Q 018855 255 DNKYFSNLRL--------------------RKGL-----LQSDQELFSTPGADTAAIVEDFGRN--QTAFFKNFVISMIR 307 (349)
Q Consensus 255 DN~Yy~nl~~--------------------~~gl-----l~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~Am~K 307 (349)
.|.||.||+. +.|- -..|..+-.++ +.|.+.+-||.+ ++.|.+||+.||.|
T Consensus 643 tndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns--~LRA~aEVYa~dda~ekFv~DFvaaw~k 720 (730)
T COG0376 643 TNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRALAEVYASDDAKEKFVKDFVAAWTK 720 (730)
T ss_pred cchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcH--HHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 7777777774 1121 24577777778 999999999985 78999999999999
Q ss_pred hhcCC
Q 018855 308 MGNLK 312 (349)
Q Consensus 308 m~~lg 312 (349)
..++.
T Consensus 721 VMn~D 725 (730)
T COG0376 721 VMNLD 725 (730)
T ss_pred Hhccc
Confidence 99875
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=68.21 E-value=21 Score=35.60 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=29.6
Q ss_pred cCCCceeecCCCCCCCcchhhhhccCCCCC---CCCHHHHHHHHHHcCCCCc
Q 018855 137 SGGPSWAVPLGRRDSRTANRALANQNLPGP---SNSLDELKSSFRNVGLNDK 185 (349)
Q Consensus 137 ~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p---~~~~~~l~~~F~~~Gls~~ 185 (349)
+|-..+..+.||-+-..-.........+.. -..+.++.++|++.|+..+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~ 231 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTI 231 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeE
Confidence 487889999999855322111111111111 2357788889999998765
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=61.98 E-value=8.8 Score=30.40 Aligned_cols=30 Identities=17% Similarity=0.207 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCccccccccccC
Q 018855 297 FFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNG 330 (349)
Q Consensus 297 F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~vn~ 330 (349)
....|..||.||+.||... .---+||.|-+
T Consensus 3 m~~~F~~am~KlavLG~d~----~~LiDCSdVIP 32 (80)
T PF11895_consen 3 MQSAFKAAMAKLAVLGHDR----SDLIDCSDVIP 32 (80)
T ss_dssp HHHHHHHHHHHHCTTTS-G----GGSEE-GGGS-
T ss_pred HHHHHHHHHHHHHHhcCCh----hhcccchhhcc
Confidence 4678999999999998654 34668999984
No 21
>PRK05269 transaldolase B; Provisional
Probab=48.97 E-value=60 Score=32.14 Aligned_cols=49 Identities=10% Similarity=0.019 Sum_probs=30.5
Q ss_pred cCCCceeecCCCCCCCcchhhhhccCC---CCCCCCHHHHHHHHHHcCCCCc
Q 018855 137 SGGPSWAVPLGRRDSRTANRALANQNL---PGPSNSLDELKSSFRNVGLNDK 185 (349)
Q Consensus 137 ~GGP~~~v~~GRrD~~~s~~~~a~~~l---P~p~~~~~~l~~~F~~~Gls~~ 185 (349)
+|-..+..+.||-|-..-........- -++-..+.++.++|++.|+..+
T Consensus 170 AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~t~ 221 (318)
T PRK05269 170 AGVFLISPFVGRILDWYKKNTGKKEYAPAEDPGVVSVTKIYNYYKKHGYKTV 221 (318)
T ss_pred cCCCEEEeeccHHHHHhhhcccccccCcCCCcHHHHHHHHHHHHHHcCCCce
Confidence 488889999999875321110000001 1123468888999999999876
No 22
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=39.18 E-value=1.7e+02 Score=29.84 Aligned_cols=48 Identities=15% Similarity=0.259 Sum_probs=30.5
Q ss_pred cCCCceeecCCCCCCCcchhhhhccCCCCCC----CCHHHHHHHHHHcCCCCc
Q 018855 137 SGGPSWAVPLGRRDSRTANRALANQNLPGPS----NSLDELKSSFRNVGLNDK 185 (349)
Q Consensus 137 ~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~----~~~~~l~~~F~~~Gls~~ 185 (349)
+|-..+..+.||-|--.-.... ...+|... ..+.++.++|++.|+..+
T Consensus 174 AGa~~ISPfVgRi~dw~~~~~g-~~~~~~~~dpGv~~v~~i~~~~~~~~~~T~ 225 (391)
T PRK12309 174 AGVTLISPFVGRILDWYKKETG-RDSYPGAEDPGVQSVTQIYNYYKKFGYKTE 225 (391)
T ss_pred cCCCEEEeecchhhhhhhhccC-CCccccccchHHHHHHHHHHHHHhcCCCcE
Confidence 5888999999997762211110 01133322 357888889999998665
No 23
>cd00957 Transaldolase_TalAB Transaldolases including both TalA and TalB. The enzyme catalyses the reversible transfer of a dyhydroxyacetone moiety, derived from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. The catalytic mechanism is similar to other class I aldolases. The enzyme is found in the non-oxidative branch of the pentose phosphate pathway and forms a dimer in solution.
Probab=38.62 E-value=58 Score=32.20 Aligned_cols=48 Identities=13% Similarity=0.147 Sum_probs=29.7
Q ss_pred cCCCceeecCCCCCCCcchhhhhccCCCC----CCCCHHHHHHHHHHcCCCCc
Q 018855 137 SGGPSWAVPLGRRDSRTANRALANQNLPG----PSNSLDELKSSFRNVGLNDK 185 (349)
Q Consensus 137 ~GGP~~~v~~GRrD~~~s~~~~a~~~lP~----p~~~~~~l~~~F~~~Gls~~ 185 (349)
+|-..+..+.||-|-..-..... ...+. +-..+.++.++|++.|+..+
T Consensus 168 AGa~~ISPfVgRi~d~~~~~~~~-~~~~~~~d~Gv~~v~~i~~~~~~~~~~T~ 219 (313)
T cd00957 168 AGVTLISPFVGRILDWYKKHSGD-KAYTAEEDPGVASVKKIYNYYKKFGYKTK 219 (313)
T ss_pred cCCCEEEeecchHHHhhhhcccc-ccCCccCCcHHHHHHHHHHHHHHcCCCcE
Confidence 47788999999987532111000 01111 22357888889999999776
No 24
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=35.05 E-value=29 Score=28.25 Aligned_cols=20 Identities=40% Similarity=0.521 Sum_probs=10.4
Q ss_pred CchHHHHHHHHHHHHHHHhc
Q 018855 1 MASLRYLLAAALVVAFVLEG 20 (349)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (349)
|+|=.++|++++|++++|..
T Consensus 1 MaSK~~llL~l~LA~lLlis 20 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLIS 20 (95)
T ss_pred CchhHHHHHHHHHHHHHHHH
Confidence 77434555555554544443
No 25
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.00 E-value=64 Score=25.00 Aligned_cols=28 Identities=21% Similarity=0.374 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhhCccchhhHHHHhhhcc
Q 018855 42 IIEDVLKKAFSSDIRIGASLIRLHFHDC 69 (349)
Q Consensus 42 iVr~~v~~~~~~~~~~aa~lLRL~FHDc 69 (349)
|.|+.+++.+..+|.+-...||+.+--.
T Consensus 24 iark~~~k~lk~NPpine~~iR~M~~qm 51 (71)
T COG3763 24 IARKQMKKQLKDNPPINEEMIRMMMAQM 51 (71)
T ss_pred HHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 8999999999999999999999998754
No 26
>PTZ00459 mucin-associated surface protein (MASP); Provisional
Probab=34.74 E-value=25 Score=34.35 Aligned_cols=14 Identities=43% Similarity=0.477 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHH
Q 018855 5 RYLLAAALVVAFVL 18 (349)
Q Consensus 5 ~~~~~~~~~~~~~~ 18 (349)
|+||+|+|+|+|..
T Consensus 8 RVLLVCALCVLWCg 21 (291)
T PTZ00459 8 RVLLVCALCVLWCG 21 (291)
T ss_pred hHHHHHHHHHHhcC
Confidence 99999999999965
No 27
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=24.34 E-value=46 Score=28.91 Aligned_cols=34 Identities=21% Similarity=0.395 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHcCCCCccce-eeeccccccccccc
Q 018855 168 NSLDELKSSFRNVGLNDKFDL-VALSGAHTFGRAQC 202 (349)
Q Consensus 168 ~~~~~l~~~F~~~Gls~~~el-VaLsGaHTiG~ahc 202 (349)
+++.+.+-.|+++||++. ++ |.|--+|-||+++-
T Consensus 31 ddvkeqI~K~akKGltps-qIGviLRDshGi~q~r~ 65 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPS-QIGVILRDSHGIGQVRF 65 (151)
T ss_pred HHHHHHHHHHHHcCCChh-HceeeeecccCcchhhe
Confidence 456677779999999998 76 56669999998873
No 28
>PRK12346 transaldolase A; Provisional
Probab=21.40 E-value=3.9e+02 Score=26.48 Aligned_cols=66 Identities=12% Similarity=0.041 Sum_probs=37.7
Q ss_pred CCcHHHHHHHhhhhHh--hhcCCCceeecCCCCCCCcchhhhhccCCCC----CCCCHHHHHHHHHHcCCCCc
Q 018855 119 VVSCADILTIAAERSV--ALSGGPSWAVPLGRRDSRTANRALANQNLPG----PSNSLDELKSSFRNVGLNDK 185 (349)
Q Consensus 119 ~VScADilalAar~AV--~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~----p~~~~~~l~~~F~~~Gls~~ 185 (349)
.|+|-=.+.+....|+ ..+|-..+..+.||-|-..-.... ...++. +-..+.++.++|++.|+..+
T Consensus 149 GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~-~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~ 220 (316)
T PRK12346 149 GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKP-MDPYVVEEDPGVKSVRNIYDYYKQHRYETI 220 (316)
T ss_pred CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccc-cccccccCCChHHHHHHHHHHHHHcCCCcE
Confidence 3444443444444333 335888999999998863221110 011211 12457788889999998766
No 29
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=21.05 E-value=5.4e+02 Score=25.52 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=67.4
Q ss_pred hcCCCceeecCCCCCCCcchhhhhcc---CCCCCCCCHHHHHHHHHHcCCCCccceeeeccccccccccccccccccccC
Q 018855 136 LSGGPSWAVPLGRRDSRTANRALANQ---NLPGPSNSLDELKSSFRNVGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDF 212 (349)
Q Consensus 136 ~~GGP~~~v~~GRrD~~~s~~~~a~~---~lP~p~~~~~~l~~~F~~~Gls~~~elVaLsGaHTiG~ahc~~f~~Rl~~f 212 (349)
.+|-..+..+.||-|--.-....... ..-++-..+.++.++|++.|+..+ =|.| .=.+++.... +
T Consensus 167 ~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~k~~g~~T~-Im~A--SfRn~~qv~~------l--- 234 (317)
T TIGR00874 167 EAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYYKKHGYPTE-VMGA--SFRNKEEILA------L--- 234 (317)
T ss_pred HcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHHHHcCCCcE-EEee--ccCCHHHHHH------H---
Confidence 35888999999998652111100000 011123467888889999999776 3322 1112222221 1
Q ss_pred CCCCCCC-CcccHHHHHHHHhhCCCCC---CCCcccccCCCCCCccchHHHHHhhhcCcccccchhhccCCccchHHHHH
Q 018855 213 NKTGKPD-PTVDRTLLKQLRELCPQGG---NGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVE 288 (349)
Q Consensus 213 ~g~~~~d-p~ld~~~~~~L~~~Cp~~~---~~~~~~~lD~~tp~~FDN~Yy~nl~~~~gll~SD~~L~~d~~~~t~~~V~ 288 (349)
.| .| =|++|...++|...-..-. .+......+ ..|..+|-..|+..++..++ .. . ....-++
T Consensus 235 aG---~d~~Ti~p~ll~~L~~~~~~~~~~l~~~~~~~~~-~~~~~~~e~~fr~~~~~d~m-------a~-e--kl~~gir 300 (317)
T TIGR00874 235 AG---CDRLTISPALLDELKESTGPVERKLDPESAKKVD-KQPIILDESEFRFLHNEDAM-------AT-E--KLAEGIR 300 (317)
T ss_pred HC---CCeEeCCHHHHHHHHhCCCCcCccCCcccccccc-ccCCCCCHHHHHHHhCCCcc-------hH-H--HHHHHHH
Confidence 11 12 2688888888875432110 111111111 23456788888755544332 00 1 2334456
Q ss_pred HhhcCHHHHH
Q 018855 289 DFGRNQTAFF 298 (349)
Q Consensus 289 ~yA~d~~~F~ 298 (349)
.|+.|+....
T Consensus 301 ~F~~d~~~Le 310 (317)
T TIGR00874 301 KFAADQEKLE 310 (317)
T ss_pred HHHHHHHHHH
Confidence 6666665443
Done!