BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018858
(349 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9DB94|WDR53_MOUSE WD repeat-containing protein 53 OS=Mus musculus GN=Wdr53 PE=2 SV=1
Length = 358
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 149/400 (37%), Gaps = 116/400 (29%)
Query: 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNED 72
GH ++ C A++D G VAS GE G + + + + G VTS+ F +
Sbjct: 8 GHSSSILCLNANKD--GLVASGGEGGDLVAWGEDGTPLGHMQLEGADDVTSVLFSASCPT 65
Query: 73 IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDI 132
+Y S G+ + DV L+ ++ N+EEIN + N S LA ADD G +KI+D+
Sbjct: 66 KLYASHGETISVLDVRSLKG--SLDHFHVNEEEINCLSLNETESLLASADDSGAIKILDL 123
Query: 133 RQHCLYKSLRAGHSSICSSVQFIPWKPWE----GL------------------------- 163
+ + +SL+ HS+ICSSV F P +P GL
Sbjct: 124 EKKKVTRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPVWITNLQEDET 182
Query: 164 --PENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSK 221
E G+ NPA H++++ I DG V + +
Sbjct: 183 EETEGPQTPGRLLNPALAHSVSVASC------GNIFSCGAEDGKVRIFRVM--------- 227
Query: 222 STTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKY 281
G + + GHT S V F
Sbjct: 228 -----------------------------GVKCERELGFKGHTLGVSQVCFL---PESSL 255
Query: 282 LISGGNDKLVKVWDC-------------------------------SRFQGVQTSINNDL 310
L++GGND +++WD SR G + + +
Sbjct: 256 LLTGGNDGRIRLWDVSGKMEKLQKSPARHIHRKKAKRAACPTQGGNSRAPGAEDEGHAKI 315
Query: 311 LIK-NINLNKKVNWLCTTPTE-SENLVVCDTSKVVKVYSI 348
L K +I +KVNWL +T + +++++V D + V VY +
Sbjct: 316 LPKLDIEHGEKVNWLLSTKIKGNKSILVADQTSCVSVYPL 355
>sp|Q32KQ2|WDR53_BOVIN WD repeat-containing protein 53 OS=Bos taurus GN=WDR53 PE=2 SV=1
Length = 358
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 153/405 (37%), Gaps = 126/405 (31%)
Query: 13 GHKATATCCIASRDRPGFVASSGEDG-CICWFDLRSKDVQLVTDV---GNGPVTSLCFKS 68
GH + C AS++ G VAS E G + W +D L+ G VT++ F
Sbjct: 8 GHSSPILCLNASQE--GLVASGAEGGDLVVW----GEDGTLLGHTCFQGAEDVTNVLFSP 61
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+Y S G+ + DV + PL+ ++ N+EEIN + N + LA ADD G +K
Sbjct: 62 SCPTKLYASHGETISILDVR--SLKEPLDDFHVNEEEINCLSLNETENLLASADDSGTIK 119
Query: 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKP--------------W---EGLP------- 164
I+D+ + +SL+ HS+ICSSV F P +P W + P
Sbjct: 120 ILDLENKKISRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWNLRKARPLWITNLQ 178
Query: 165 -------ENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNI 217
E+ + GQ NPA H++++ + DG V + +
Sbjct: 179 EDETEEMESPQSPGQLLNPALAHSVSVASC------GNVFSCGAEDGKVRIFRVM----- 227
Query: 218 SRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGE 277
G + + GH+ S V F
Sbjct: 228 ---------------------------------GVKCEQELGFKGHSLGVSQVCFL---- 250
Query: 278 RGKY-LISGGNDKLVKVWDCS--------------------------RFQGVQTSINND- 309
R Y L++GGND +K+WD S + G S+ +
Sbjct: 251 RESYLLLTGGNDGKIKLWDVSSEIEKKHKSPTKHTHRKKTKRAAYTKQGGGTHASVTGED 310
Query: 310 ----LLIK-NINLNKKVNWLCTTPTES-ENLVVCDTSKVVKVYSI 348
+L K +I +KVNWL +T + N++V D + + VY +
Sbjct: 311 EHGKILPKLSIEHGEKVNWLLSTKIKGYRNILVADQTSCISVYPL 355
>sp|Q7Z5U6|WDR53_HUMAN WD repeat-containing protein 53 OS=Homo sapiens GN=WDR53 PE=2 SV=1
Length = 358
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 147/402 (36%), Gaps = 118/402 (29%)
Query: 13 GHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGNED 72
GH + C AS++ G +AS E G + + + G VTS+ F
Sbjct: 8 GHSSPVLCLNASKE--GLLASGAEGGDLTAWGEDGTPLGHTRFQGADDVTSVLFSPSCPT 65
Query: 73 IIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDI 132
+Y S G+ + DV L+ ++ N+EEIN + N + LA ADD G +KI+D+
Sbjct: 66 KLYASHGETISVLDVRSLKD--SLDHFHVNEEEINCLSLNQTENLLASADDSGAIKILDL 123
Query: 133 RQHCLYKSLRAGHSSICSSVQFIPWKP--------------W---EGLP----------- 164
+ +SL+ HS+ICSSV F P +P W + P
Sbjct: 124 ENKKVIRSLKR-HSNICSSVAFRPQRPQSLVSCGLDMQVMLWSLQKARPLWITNLQEDET 182
Query: 165 ---ENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSK 221
E + GQ NPA H+I++ I DG V + +
Sbjct: 183 EEMEGPQSPGQLLNPALAHSISVASC------GNIFSCGAEDGKVRIFRVM--------- 227
Query: 222 STTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKY 281
G + + GHT+ S V F
Sbjct: 228 -----------------------------GVKCEQELGFKGHTSGVSQVCFL---PESYL 255
Query: 282 LISGGNDKLVKVWD-------------------------CSRFQGVQTSIN--------N 308
L++GGND + +WD C++ QG T+ + N
Sbjct: 256 LLTGGNDGKITLWDANSEVEKKQKSPTKRTHRKKPKRGTCTK-QGGNTNASVTDEEEHGN 314
Query: 309 DLLIKNINLNKKVNWLCTTPTES-ENLVVCDTSKVVKVYSIS 349
L NI +KVNWL T + +N++V D + + VY ++
Sbjct: 315 ILPKLNIEHGEKVNWLLGTKIKGHQNILVADQTSCISVYPLN 356
>sp|Q54BI5|WDR53_DICDI WD repeat-containing protein 53 homolog OS=Dictyostelium discoideum
GN=wdr53 PE=3 SV=1
Length = 368
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRS-KDVQLVTDVGNG-PVTSLCFK 67
+L GHK T CI+S ++ +AS +D + +DL + K +Q + + G PV ++CF
Sbjct: 24 KLIGHKDTV-LCISSHNKKEIIASGSDDCTVRIWDLNTNKSIQSIVEGFQGNPVNNVCF- 81
Query: 68 SGNEDIIYVSSGKEVKSFDVHMP-ASWRPLES-YNYNKEEINQIVCNPKSSFLACADDGG 125
+ +Y S + SFD+ P + + Y +N EEINQ+ + K +LA DD G
Sbjct: 82 -DQDFTLYCSYDNIIVSFDLRQPNVILKEFNTQYKFNTEEINQLSFDSKYQYLAACDDSG 140
Query: 126 DVKIIDIRQHCLYKSLRAGHSSICSSVQFIP 156
KIID+ ++ L +SL H++I + F P
Sbjct: 141 QTKIIDVTKNKLVESLNKKHTNIATGCVFRP 171
>sp|Q8JZX3|POC1A_MOUSE POC1 centriolar protein homolog A OS=Mus musculus GN=Poc1a PE=2
SV=2
Length = 405
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 115/296 (38%), Gaps = 54/296 (18%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
+++ R GHK TC S +AS D + + K V V S+
Sbjct: 51 QSRAYRFTGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACA 121
F S + ++ S K VK + H R L S + IN + C +P + A
Sbjct: 110 HFCSDGQSLVTASDDKTVKVWSTHRQ---RFLFSLT---QHINWVRCAKFSPDGRLIVSA 163
Query: 122 DDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFV- 179
D VK+ D + C++ H + V F P +G C A +
Sbjct: 164 SDDKTVKLWDKTSRECIHSYCE--HGGFVTYVDFHP-------------SGTCIAAAGMD 208
Query: 180 HAIAIPDADMLDKTNKICVVAK-GDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNI 238
+ + + DA +T+++ + V+ ++ N + S+
Sbjct: 209 NTVKVWDA----RTHRLLQHYQLHSAAVNALSFHPSGNYLITASS--------------- 249
Query: 239 RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 294
D+ ++ILD G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW
Sbjct: 250 -DSTLKILDLMEGRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVW 298
>sp|Q8NBT0|POC1A_HUMAN POC1 centriolar protein homolog A OS=Homo sapiens GN=POC1A PE=1
SV=2
Length = 407
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 107/299 (35%), Gaps = 60/299 (20%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
+++ R GHK TC S +AS D + + K V V S+
Sbjct: 51 QSRAYRFTGHKDAVTCVNFSPSG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACA 121
F S + + S K VK + H L + IN + C +P + A
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWATHRQKFLFSLS------QHINWVRCAKFSPDGRLIVSA 163
Query: 122 DDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFVHA 181
D VK+ D KS R S C F+ + ++P+
Sbjct: 164 SDDKTVKLWD-------KSSRECVHSYCEHGGFVTYVD--------------FHPS---- 198
Query: 182 IAIPDADMLDKTNKICVVAKG-DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNI-- 238
C+ A G D V V ++ + + + + + G N
Sbjct: 199 -------------GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI 245
Query: 239 ---RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 294
D+ ++ILD G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW
Sbjct: 246 TASSDSTLKILDLMEGRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVW 298
>sp|Q7ZVF0|POC1A_DANRE POC1 centriolar protein homolog A OS=Danio rerio GN=poc1a PE=2 SV=1
Length = 416
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 109/301 (36%), Gaps = 64/301 (21%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
+++ R GHK TC S +ASS D + + K ++ G V S+
Sbjct: 50 QSRAYRFTGHKDAVTCVQFS-PSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSV 108
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACA 121
CF + + ++ S + +K + VH L +N N + C +P +
Sbjct: 109 CFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHN------NWVRCARFSPDGQLMVSV 162
Query: 122 DDGGDVKIIDIRQHCLYKSL--RAGHSSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFV 179
D VK+ D L + G+SS V F P
Sbjct: 163 SDDRTVKLWDASSRQLIHTFCEPGGYSSY---VDFHP----------------------- 196
Query: 180 HAIAIPDADMLDKTNKICV-VAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVN- 237
+ C+ A D V V +I + + + + + N
Sbjct: 197 --------------SSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNH 242
Query: 238 ----IRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKV 293
D+ ++ILD G+ L Y++ GH +ASCV+FS G++ S G+D+ V V
Sbjct: 243 LLTASSDSTLKILDLLEGRLL---YTLHGHQGSASCVSFSRSGDQ---FASAGSDQQVMV 296
Query: 294 W 294
W
Sbjct: 297 W 297
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 114/278 (41%), Gaps = 58/278 (20%)
Query: 29 GFVASSGEDGCICWFDLRSKDVQLVTDVG-NGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
G + ++G+ G I F + +L+T G N V S+ F + + S + V+ +D+
Sbjct: 876 GKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDI 935
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQ-HCLYKSLRAGHS 146
+S + L+++ + + +V +P S LA V++ DI CLY + GH+
Sbjct: 936 ---SSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLY--IFQGHT 990
Query: 147 SICSSVQFIPWKPWEGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVV 206
G Y+ AF D ML GD V
Sbjct: 991 ------------------------GWVYSVAFN-----LDGSML-------ATGSGDQTV 1014
Query: 207 DVINIES-------ELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYS 259
+ +I S + + S +S G+ S + D + + D S G L Y+
Sbjct: 1015 RLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSD--DQTVRLWDISSGNCL---YT 1069
Query: 260 VGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS 297
+ GHT SCV +F G L SGG+D++V++WD S
Sbjct: 1070 LQGHT---SCVRSVVFSPDGAMLASGGDDQIVRLWDIS 1104
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 127/318 (39%), Gaps = 48/318 (15%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKSGN 70
L+GH + + + D + S + W ++ S V S+ F
Sbjct: 1196 LQGHTSWVNSVVFNPDGSTLASGSSDQTVRLW-EINSSKCLCTFQGHTSWVNSVVFNPDG 1254
Query: 71 EDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKII 130
+ SS K V+ +D+ +S + L ++ + +N + NP S LA V++
Sbjct: 1255 SMLASGSSDKTVRLWDI---SSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLW 1311
Query: 131 DI-RQHCLYKSLRAGHSSICSSVQFIPWKPWEGLPENNG-----------NAGQCYNPAF 178
+I CL+ GH+S SSV F P +G +G ++G+C
Sbjct: 1312 EISSSKCLHTF--QGHTSWVSSVTFSP----DGTMLASGSDDQTVRLWSISSGECLYTFL 1365
Query: 179 VHA------IAIPDADML-----DKTNKICVVAKGDGVVDVINIESEL-NISRSKSTTKP 226
H I PD +L D+T ++ ++ G + + + + +I S T
Sbjct: 1366 GHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLL 1425
Query: 227 LKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG 286
GS D + + + S G+ L Y++ GH + VAFS G L SG
Sbjct: 1426 ASGSD--------DQTVRLWNISSGECL---YTLHGHINSVRSVAFS---SDGLILASGS 1471
Query: 287 NDKLVKVWDCSRFQGVQT 304
+D+ +K+WD + ++T
Sbjct: 1472 DDETIKLWDVKTGECIKT 1489
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 109/295 (36%), Gaps = 54/295 (18%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
+ +GH + + S + +AS D + +D+ S + + G V S+ F
Sbjct: 942 KTFKGHTSRVRSVVFSPNSL-MLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNL 1000
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+ S + V+ +D+ +S + + + + +V + + LA D V+
Sbjct: 1001 DGSMLATGSGDQTVRLWDI---SSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVR 1057
Query: 129 IIDIRQ-HCLYKSLRAGHSSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFVHAIAIPDA 187
+ DI +CLY GH+S SV F P D
Sbjct: 1058 LWDISSGNCLYT--LQGHTSCVRSVVFSP-----------------------------DG 1086
Query: 188 DML-----DKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAE 242
ML D+ ++ ++ G+ + + S + L S D
Sbjct: 1087 AMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS-------DQI 1139
Query: 243 MEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCS 297
+ + D S K L Y++ GHT + VAFS G L SG D+ V++WD S
Sbjct: 1140 VRLWDISSKKCL---YTLQGHTNWVNAVAFS---PDGATLASGSGDQTVRLWDIS 1188
>sp|Q2UGU1|LIS1_ASPOR Nuclear distribution protein nudF OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=nudF PE=3 SV=2
Length = 455
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 90 PASWRP------LESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA 143
PASW P LES+ ++++N + +P S +A D +KI D L ++L+
Sbjct: 99 PASWLPSTVRYSLESH---RDKVNCVAFHPTFSSIASGSDDCTIKIWDWELGELERTLK- 154
Query: 144 GHSSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD 203
GH+ V + G P +N C + ++I D I + D
Sbjct: 155 GHTRAVRDVDY-------GGPRDNVLLASCSSD-----LSIKLWKPTDNYKNIRTLQGHD 202
Query: 204 GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGH 263
+V + N+ S S RD +M I D + G + ++ GH
Sbjct: 203 HIVSAVRFIPSRNLLVSAS----------------RDNDMRIWDVTTG---YCVKTINGH 243
Query: 264 TAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQ 303
T V+ S G++L S G D ++WD S ++
Sbjct: 244 TDWVRDVSISF---DGRFLFSTGQDMTARLWDISTVSNIE 280
>sp|B8N9H4|LIS1_ASPFN Nuclear distribution protein nudF OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=nudF PE=3 SV=2
Length = 455
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 44/220 (20%)
Query: 90 PASWRP------LESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRA 143
PASW P LES+ ++++N + +P S +A D +KI D L ++L+
Sbjct: 99 PASWLPSTVRYSLESH---RDKVNCVAFHPTFSSIASGSDDCTIKIWDWELGELERTLK- 154
Query: 144 GHSSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGD 203
GH+ V + G P +N C + ++I D I + D
Sbjct: 155 GHTRAVRDVDY-------GGPRDNVLLASCSSD-----LSIKLWKPTDNYKNIRTLQGHD 202
Query: 204 GVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGH 263
+V + N+ S S RD +M I D + G + ++ GH
Sbjct: 203 HIVSAVRFIPSRNLLVSAS----------------RDNDMRIWDVTTG---YCVKTINGH 243
Query: 264 TAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQ 303
T V+ S G++L S G D ++WD S ++
Sbjct: 244 TDWVRDVSISF---DGRFLFSTGQDMTARLWDISTVSNIE 280
>sp|Q2TBP4|POC1A_BOVIN POC1 centriolar protein homolog A OS=Bos taurus GN=POC1A PE=2 SV=1
Length = 407
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 103/300 (34%), Gaps = 62/300 (20%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
+ + R GHK TC S +AS D + + K V V S+
Sbjct: 51 QTRAYRFAGHKDAVTCVNFS-PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV 109
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACA 121
F S + + S K VK + H L + IN + C +P + A
Sbjct: 110 HFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLS------QHINWVRCAKFSPDGRLIVSA 163
Query: 122 DDGGDVKIID-IRQHCLYKSLRAGHSSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFVH 180
D VK+ D + C++ H + V F P
Sbjct: 164 SDDKTVKLWDKTSRECVHSYCE--HGGFVTYVDFHP------------------------ 197
Query: 181 AIAIPDADMLDKTNKICVVAKG-DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNI- 238
+ C+ A G D V V ++ + + + + + N
Sbjct: 198 -------------SGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYL 244
Query: 239 ----RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 294
D+ ++ILD G+ L Y++ GH A+ VAFS GE Y SGG+D+ V VW
Sbjct: 245 VTASSDSTLKILDLMEGRLL---YTLHGHQGPATTVAFSRTGE---YFASGGSDEQVMVW 298
>sp|Q7T0P4|POC1A_XENLA POC1 centriolar protein homolog A OS=Xenopus laevis GN=poc1a PE=1
SV=2
Length = 441
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 112/298 (37%), Gaps = 58/298 (19%)
Query: 5 EAKPRRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSL 64
+ + R GHK A + +AS+ D + + K G V S+
Sbjct: 50 QMRAYRFVGHK-DAILSVDFSPSGHLIASASRDKTVRLWVPSVKGESTAFKAHTGTVRSV 108
Query: 65 CFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVC---NPKSSFLACA 121
F + ++ S K +K + VH + L S N + IN + C +P + A
Sbjct: 109 SFSGDGQSLVTASDDKTIKVWTVHRQ---KFLFSLN---QHINWVRCAKFSPDGRLIVSA 162
Query: 122 DDGGDVKIIDIRQHCLYKSLRAGHSSICSS---VQFIPWKPWEGLPENNGNAGQCYNPAF 178
D +K+ D K+ R S C V F+ + P +G C A
Sbjct: 163 SDDKTIKLWD-------KTSRECIQSFCEHGGFVNFVDFHP----------SGTCIAAAA 205
Query: 179 V-HAIAIPDADMLDKTNKICVVAK-GDGVVDVINIESELNISRSKSTTKPLKGSQSTSKV 236
+ + + D M NK+ + GVV+ ++ N + S
Sbjct: 206 TDNTVKVWDIRM----NKLIQHYQVHSGVVNSLSFHPSGNYLITASN------------- 248
Query: 237 NIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVW 294
D+ +++LD G+ L Y++ GH +CV FS G + SGG+D+ V VW
Sbjct: 249 ---DSTLKVLDLLEGRLL---YTLHGHQGPVTCVKFS---REGDFFASGGSDEQVMVW 297
>sp|Q55AR8|SNR40_DICDI U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium
discoideum GN=snrnp40 PE=3 SV=1
Length = 355
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Query: 9 RRLRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
+R+R H C +R P VAS +D FD RSK + PVTS+CF
Sbjct: 141 KRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTSVCFSD 199
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
++ +I ++ +D+ PL + +++ I + ++L K
Sbjct: 200 ASDQLITGGIDNVIRVWDIRNQED--PLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCK 257
Query: 129 IIDIRQH 135
I DIR +
Sbjct: 258 IWDIRPY 264
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
Query: 170 AGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKG 229
G+C H + + M D I + D + V N E+ I T ++
Sbjct: 332 TGKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 388
Query: 230 SQSTSKVNI---RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG 286
K + RDA + + D G+ LH+ + GH AA CV + G+ ++SG
Sbjct: 389 MHLHEKRVVSGSRDATLRVWDIETGQCLHV---LMGHVAAVRCVQYD-----GRRVVSGA 440
Query: 287 NDKLVKVWD 295
D +VKVWD
Sbjct: 441 YDFMVKVWD 449
>sp|Q8TBZ3|WDR20_HUMAN WD repeat-containing protein 20 OS=Homo sapiens GN=WDR20 PE=1 SV=2
Length = 569
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 99/270 (36%), Gaps = 41/270 (15%)
Query: 45 LRSKDVQLVTDVGNGPVTSLCFKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKE 104
+R V L GNG LCF G E Y+ G K+ D+ P R +
Sbjct: 48 VRVSFVNLNDQSGNG--DRLCFNVGRELYFYIYKGVR-KAADLSKPIDKRIYKGTQPTCH 104
Query: 105 EINQIVCNPKSSFLACADDGGDVKIID-IRQHC--LYKSLRAGHSSICSSVQFIPWKPWE 161
+ N + +S L G V++ID I++ L+ R S + V+++P
Sbjct: 105 DFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESL 164
Query: 162 GLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISRSK 221
L ++ YN P +L + V + +SK
Sbjct: 165 FLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAV-----------------HTCKSK 207
Query: 222 STTKPL------KGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAAS------C 269
ST PL +G+ + + + + Q G R+ SV H S C
Sbjct: 208 STRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLC 267
Query: 270 VAFSMFGERGKYLISGGNDKLVKVW---DC 296
V +S GKY+++GG D LV VW DC
Sbjct: 268 VCWS---PDGKYIVTGGEDDLVTVWSFVDC 294
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 262 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINND 309
GHTAA +AFS E G YL +G D VK+WD + + ++T N +
Sbjct: 378 GHTAAVRSIAFS---ENGYYLATGSEDGEVKLWDLRKLKNLKTFANEE 422
>sp|O22467|MSI1_ARATH Histone-binding protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1
SV=1
Length = 424
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL------RSKDVQLVTDVGNGPVTS 63
+LRGH + S+ + G + S +D IC +D+ +S D Q + G V
Sbjct: 173 KLRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVED 232
Query: 64 LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LACA 121
+ + +E + V + + +D+ P++ +P++S + E+N + NP + + +A
Sbjct: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATG 292
Query: 122 DDGGDVKIIDIRQ 134
VK+ D+R+
Sbjct: 293 STDKTVKLFDLRK 305
Score = 35.0 bits (79), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 30 FVASSGEDGCICWFDLRS----KDVQLVTDVGNGPVTSLCFKSGNEDIIYV-SSGKEVKS 84
S G+D + +DLRS K VQ V + V L F NE ++ S+ K VK
Sbjct: 242 LFGSVGDDQYLLIWDLRSPSASKPVQSVV-AHSMEVNCLAFNPFNEWVVATGSTDKTVKL 300
Query: 85 FDVHMPASWRPLESYNYNKEEINQIVCNPKS 115
FD+ ++ L +++ +KEE+ Q+ NPK+
Sbjct: 301 FDLRKLST--ALHTFDSHKEEVFQVGWNPKN 329
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 130/326 (39%), Gaps = 48/326 (14%)
Query: 30 FVASSGEDGCI-CWFDLRSKDVQLVTDV-GNGPVTSLCFKSGNEDIIYVSSGKEVKSFDV 87
+A++G DG I W S+D L+ + GN + + F + I ++ K VK + V
Sbjct: 1377 IIATAGADGNIQLW---HSQDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRV 1433
Query: 88 HMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSS 147
+ + L ++ E+N++ +P LA A VK+ ++ K+L+ GH+
Sbjct: 1434 RDGKALKTLIGHD---NEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLK-GHTD 1489
Query: 148 ICSSVQFIP-------------WKPWEGLPENNGNAGQCYNPAFVHAIAIPDADML---- 190
V F P + W+ N + +N PD ML
Sbjct: 1490 EVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTS 1549
Query: 191 -DKTNKICVVAKGDGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQS 249
DKT K+ G ++ + S + S S S S S D ++I
Sbjct: 1550 ADKTVKLWRSHDGH-LLHTFSGHSNVVYSSSFSPDGRYIASAS------EDKTVKIWQID 1602
Query: 250 GGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF--QGVQTSIN 307
G HL ++ H A V ++F GK LISG D K+W RF Q +TS
Sbjct: 1603 G----HLLTTLPQHQAG---VMSAIFSPDGKTLISGSLDTTTKIW---RFDSQQAKTSQM 1652
Query: 308 NDLLIKNINLNKKVNWLCTTPTESEN 333
N L++ N + ++L T P + N
Sbjct: 1653 NTLVMSACNWLQ--DYLNTNPNVTPN 1676
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 35/189 (18%)
Query: 167 NGNAGQCYNPAFVHAIAIPDADML-----DKTNKICVVAKGDGVVDVINIESELNISRSK 221
NG+ Y+ +F PD + DKT K+ + G + + E +N
Sbjct: 1110 NGHEDAVYSVSFS-----PDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFS 1164
Query: 222 STTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKY 281
K L + S D +++ D + G+ L ++ GH+A V FS G+
Sbjct: 1165 PDGKNLASASS-------DHSIKLWDTTSGQLL---MTLTGHSAGVITVRFS---PDGQT 1211
Query: 282 LISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKK-VNWLCTTPTESENLVVCDTS 340
+ +G DK VK+W + L+K +N ++ VN L +P + + L
Sbjct: 1212 IAAGSEDKTVKLWHR----------QDGKLLKTLNGHQDWVNSLSFSP-DGKTLASASAD 1260
Query: 341 KVVKVYSIS 349
K +K++ I+
Sbjct: 1261 KTIKLWRIA 1269
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 259 SVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNI 315
++ GH A V+FS G+ + SGG+DK +K+W S ++T ++ + N+
Sbjct: 1108 TLNGHEDAVYSVSFS---PDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNV 1161
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
Query: 170 AGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGVVDVINIESELNISR---SKSTTKP 226
G+C H + + M D I + D + V N E+ I ST +
Sbjct: 410 TGKCLRTLVGHTGGVWSSQMRDN---IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRC 466
Query: 227 LKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGG 286
+ + RDA + + D G+ LH+ + GH AA CV + G+ ++SG
Sbjct: 467 MHLHEKRVVSGSRDATLRVWDIETGQCLHV---LMGHVAAVRCVQYD-----GRRVVSGA 518
Query: 287 NDKLVKVWD 295
D +VKVWD
Sbjct: 519 YDFMVKVWD 527
>sp|C7Z6H2|LIS1_NECH7 Nuclear distribution protein PAC1 OS=Nectria haematococca (strain
77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=PAC1 PE=3
SV=1
Length = 448
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 90 PASWRPLESYNY----NKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGH 145
PASW P + ++ IN + +P S +A D+ +KI D L ++++ GH
Sbjct: 87 PASWLPAGPPRHVLQSHRTPINCVAFHPIYSSIASGDEDAIIKIWDWEFGELERTVK-GH 145
Query: 146 SSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGV 205
+ + + G P+ + C + + I D D+ I + D
Sbjct: 146 TKAVLDLDY-------GGPKGHTLLASCSS-----DLTIKLWDPSDEYKNIRTLPGHDHS 193
Query: 206 VDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTA 265
V S + S + PL G+ S RD + I D + G L ++ GH+
Sbjct: 194 V------SAVRFIPSGAPGAPLSGNLLASAS--RDVTVRIWDVTTGYCLK---TIRGHSD 242
Query: 266 AASCVAFSMFGERGKYLISGGNDKLVKVWDCS 297
V+ S+ GKYL+S GND+ +++WD S
Sbjct: 243 WIRDVSPSL---DGKYLLSTGNDRTLRLWDIS 271
>sp|Q54YD8|COPB2_DICDI Coatomer subunit beta' OS=Dictyostelium discoideum GN=copb2 PE=3
SV=1
Length = 1005
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 255 HLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 304
H +++ GH + V + GE+ YLISG +DKLVK+WD VQT
Sbjct: 177 HPHFTLEGHEKGINSVEYFSGGEK-PYLISGADDKLVKIWDYQSKTCVQT 225
>sp|O22466|MSI1_SOLLC WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum
GN=MSI1 PE=2 SV=1
Length = 424
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 10 RLRGHKATATCCIASRDRPGFVASSGEDGCICWFDL------RSKDVQLVTDVGNGPVTS 63
RLRGH S+ + G + S +D IC +D+ ++ + + V G V
Sbjct: 173 RLRGHSTEGYGLSWSQFKQGHLLSGSDDSHICLWDINATPKNKALEAMQIFKVHEGVVED 232
Query: 64 LCFKSGNEDII-YVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSF-LACA 121
+ + +E + V + + +D+ P+ +P++S ++ E+N + NP + + +A
Sbjct: 233 VAWHLRHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATG 292
Query: 122 DDGGDVKIIDIRQ 134
VK+ D+R+
Sbjct: 293 STDKTVKLFDLRK 305
>sp|B9WD30|LIS1_CANDC Nuclear distribution protein PAC1 OS=Candida dubliniensis (strain
CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL
Y-17841) GN=PAC1 PE=3 SV=1
Length = 489
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 128/357 (35%), Gaps = 69/357 (19%)
Query: 3 DAEAKPRRLRGH-KATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPV 61
D + ++ H +A C + +P ++A+ D I +D + ++ + V
Sbjct: 154 DNTIPEKMIKAHTRAINKICFTYK-KPYYLATCSSDLTIKIWDEKFNHIRTLNG-HEHTV 211
Query: 62 TSLCFKSGNEDIIY-VSSGKEVKSFDVHMPASWRPLESYNY-----------NKEEINQI 109
+S+ F + I+Y VS K ++ +D+ S + ++ N +
Sbjct: 212 SSIQFSPIDNSILYSVSRDKNIRVWDIFQGISLKSFVGHSEWCRDLDIVSSDNNGDFVLT 271
Query: 110 VCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEGLPENNGN 169
N +S+ L+ A G + +I GH + +V+F+P + N
Sbjct: 272 CSNDQSARLSHASSGAGLAMI------------VGHGHVVETVKFLP------ALQANKI 313
Query: 170 AGQCYNPAFVHAIAIPDADMLDKTN-----KICVVAKGDGVVDVINIESELNISRSKSTT 224
+ IP + DKT K C+ A D + + I
Sbjct: 314 LDEYITKNIEQFPTIPLELLKDKTYNQLGFKYCITASRDNTIKLWLIPPPKIAPHRPPLP 373
Query: 225 KPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLIS 284
SQS +R GH++ C+ G+++IS
Sbjct: 374 SKYNNSQSWMIAELR----------------------GHSSWVKCLCVH---PNGRFIIS 408
Query: 285 GGNDKLVKVWDCSRF------QGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLV 335
G +DK +K WD S V+T I +D I +I+ + +TPT E+L+
Sbjct: 409 GSDDKTIKFWDLSSLLETGSVNVVKTIIGHDGFINDIDFARLKEASDSTPTSQEDLL 465
>sp|O62621|COPB2_DROME Coatomer subunit beta' OS=Drosophila melanogaster GN=beta'Cop PE=2
SV=2
Length = 914
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 257 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 304
++++ GH +CV + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCVDYYHGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB
PE=2 SV=1
Length = 732
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 17/97 (17%)
Query: 252 KRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLL 311
K L Y++ H A + S G+YL SG NDK +KVWD F+
Sbjct: 570 KTLECKYTLESHARAVKTLCIS-----GQYLFSGSNDKTIKVWDLKTFRC---------- 614
Query: 312 IKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 348
N L W+ T NL K ++V+++
Sbjct: 615 --NYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNL 649
>sp|Q20168|COPB2_CAEEL Probable coatomer subunit beta' OS=Caenorhabditis elegans
GN=F38E11.5 PE=3 SV=3
Length = 1000
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 257 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 304
++++ GH +CV + GE+ Y+ISG +D LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCVDYYHGGEK-PYIISGADDHLVKIWDYQNKTCVQT 224
>sp|A7S338|LIS1_NEMVE Lissencephaly-1 homolog OS=Nematostella vectensis GN=v1g242515 PE=3
SV=1
Length = 409
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 124/327 (37%), Gaps = 35/327 (10%)
Query: 8 PRR--LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLC 65
P R L GH++ T + V SS ED + +D + D + V L
Sbjct: 97 PERYTLTGHRSPITKVLFHPVYSVMVTSS-EDATVKVWDYETGDFERTLKGHTDAVQDLA 155
Query: 66 FKSGNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGG 125
F + + S+ +K +D R L +++N ++ I P L A
Sbjct: 156 FDHTGKFLASSSADMTIKLWDFQGFECIRTLHGHDHN---VSSISFLPSGDHLVSASRDK 212
Query: 126 DVKIIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEGLPENNGNA-GQCYNPAFVHAIAI 184
+K+ +I K+ + GH V+ P +G+ C N + +
Sbjct: 213 TIKMWEIATGYCVKTFQ-GHGEWVRRVR----------PNADGSLIASCSNDQTIRVWVV 261
Query: 185 PDA----DMLDKTNKICVVAKG-DGVVDVINIESELNISRSKSTTKPLKGSQSTSKVNIR 239
D+ D + I + + VIN + + + + P S S R
Sbjct: 262 ASRECKCDLRDHDHVIEDLNWAPESATPVINEAAGVEGGKKAMSPGPFLVSAS------R 315
Query: 240 DAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRF 299
D ++I D S G L ++ GH V MF GK+++S +DK +++WD
Sbjct: 316 DKSIKIWDVSAGVCL---VTLVGHDNWVRAV---MFHPGGKFIVSCSDDKTLRIWDYKNK 369
Query: 300 QGVQTSINNDLLIKNINLNKKVNWLCT 326
+ +T + ++ + ++ +K ++ T
Sbjct: 370 RCAKTLVAHEHFVTTLDFHKSAPFVAT 396
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 257 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 304
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
>sp|Q38960|LWD2_ARATH WD repeat-containing protein LWD2 OS=Arabidopsis thaliana GN=LWD2
PE=2 SV=1
Length = 346
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 29/155 (18%)
Query: 5 EAKPRRLRGHKATATCCIASRDRP---------------------GFVASSGEDGCICWF 43
EA+PRR+ TC I +R G AS EDG + F
Sbjct: 145 EAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVSEDGSVRVF 204
Query: 44 DLRSKDVQLVTDVGNGPVTSLCFKSGN-EDIIYVSS----GKEVKSFDVHMPASWRPLES 98
DLR K+ + P T L S N +D Y+++ ++ D+ PA P+
Sbjct: 205 DLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDIRFPA--LPVVE 262
Query: 99 YNYNKEEINQIVCNPKSSFLAC-ADDGGDVKIIDI 132
++ +N I P SS C A D I DI
Sbjct: 263 LQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDI 297
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 257 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 304
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 257 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 304
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 257 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 304
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
>sp|Q4R4I8|COPB2_MACFA Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1
Length = 906
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 257 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 304
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 257 DYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT 304
++++ GH +C+ + G++ YLISG +D+LVK+WD VQT
Sbjct: 178 NFTLEGHEKGVNCIDYYSGGDK-PYLISGADDRLVKIWDYQNKTCVQT 224
>sp|P61963|DCAF7_MOUSE DDB1- and CUL4-associated factor 7 OS=Mus musculus GN=Dcaf7 PE=2
SV=1
Length = 342
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 30 FVASSGEDGCICWFDLRSKDVQLVT--DVGNGPVTSLCFKSGNEDIIYVSS--GKEVKSF 85
AS G DG + FDLR + + D + P+ LC+ + + + + G EV
Sbjct: 191 MFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGMEVVIL 250
Query: 86 DVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC-ADDGGDVKIIDIRQ 134
DV +P + P+ N ++ +N I P SS C A D I DI+Q
Sbjct: 251 DVRVPCT--PVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQ 298
>sp|P61962|DCAF7_HUMAN DDB1- and CUL4-associated factor 7 OS=Homo sapiens GN=DCAF7 PE=1
SV=1
Length = 342
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 30 FVASSGEDGCICWFDLRSKDVQLVT--DVGNGPVTSLCFKSGNEDIIYVSS--GKEVKSF 85
AS G DG + FDLR + + D + P+ LC+ + + + + G EV
Sbjct: 191 MFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGMEVVIL 250
Query: 86 DVHMPASWRPLESYNYNKEEINQIVCNPKSSFLAC-ADDGGDVKIIDIRQ 134
DV +P + P+ N ++ +N I P SS C A D I DI+Q
Sbjct: 251 DVRVPCT--PVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQ 298
>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster
GN=ago PE=1 SV=1
Length = 1326
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 239 RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 298
RDA + + D G LH+ + GH AA CV + GK ++SG D +VK+W R
Sbjct: 1093 RDATLRVWDIEQGSCLHV---LVGHLAAVRCVQYD-----GKLIVSGAYDYMVKIWHPER 1144
Query: 299 FQGVQT 304
+ + T
Sbjct: 1145 QECLHT 1150
>sp|A1DP19|LIS1_NEOFI Nuclear distribution protein nudF OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=nudF
PE=3 SV=1
Length = 441
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 90/228 (39%), Gaps = 31/228 (13%)
Query: 90 PASWRPLESYNY----NKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGH 145
P SW P + ++E + + +P S LA D +KI D L ++++ GH
Sbjct: 72 PTSWLPRSPARHILEGHREPVTCVAFHPVFSSLASGSDDTTIKIWDWELGELERTVK-GH 130
Query: 146 SSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGV 205
+ V + G P C + + I D D I + D
Sbjct: 131 TKAVLDVDY-------GGPRGGTLLASCSS-----DLTIKLWDPSDNYKNIRTLPGHDHS 178
Query: 206 VDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTA 265
V S + S + P+ G+ S RD + I D + G + ++ GH
Sbjct: 179 V------SSVRFIPSGAAGSPMSGNLLVSAS--RDKTLRIWDVTTG---YCVKTLSGHVD 227
Query: 266 AASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIK 313
VA S+ G++L + G+D++ ++WD S + T + ++ +I+
Sbjct: 228 WVRAVAPSL---DGRFLFAAGDDRIPRLWDLSSAETKSTFLGHEHVIE 272
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 39.3 bits (90), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 65/328 (19%), Positives = 128/328 (39%), Gaps = 46/328 (14%)
Query: 11 LRGHKATATCCIASRDRPGF--VASSGEDGCICWFDLRSKDVQLVTDVGNGPVTSLCFKS 68
L GH++ T I P F + S+ ED I +D + D + V + F
Sbjct: 104 LSGHRSPVTRVIF---HPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 69 GNEDIIYVSSGKEVKSFDVHMPASWRPLESYNYNKEEINQIVCNPKSSFLACADDGGDVK 128
+ + S+ +K +D R + +++N ++ + P + A +K
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN---VSSVAIMPNGDHIVSASRDKTIK 217
Query: 129 IIDIRQHCLYKSLRAGHSSICSSVQFIPWKPWEGLPENNGNA-GQCYNPAFVHAIAIP-- 185
+ +++ K+ GH V+ P +G C N V +
Sbjct: 218 MWEVQTGYCVKTF-TGHREWVRMVR----------PNQDGTLIASCSNDQTVRVWVVATK 266
Query: 186 --DADMLDKTNKI-CVVAKGDGVVDVINIESELNISRSKSTTKP----LKGSQSTSKVNI 238
A++ + + + C+ + I SE S +K + KP L GS
Sbjct: 267 ECKAELREHEHVVECISWAPESSYSTI---SEATGSETKKSGKPGPFLLSGS-------- 315
Query: 239 RDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 298
RD +++ D S G L ++ GH V +F GK+++S +DK ++VWD
Sbjct: 316 RDKTIKMWDISTGMCL---MTLVGHDNWVRGV---LFHSGGKFILSCADDKTLRVWDFKN 369
Query: 299 FQGVQTSINNDLLIKNINLNKKVNWLCT 326
+ ++T ++ + +++ +K ++ T
Sbjct: 370 KRCMKTLNAHEHFVTSLDFHKTAPYVVT 397
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 39.3 bits (90), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 222 STTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTAAASCVAFSMFGERGKY 281
ST + + + +T RD + + D G LH+ ++ GH AA CV F G
Sbjct: 341 STVRCMAMANTTLVTGSRDCTLRVWDIETG--LHV-RTLQGHQAAVRCVQFD-----GNI 392
Query: 282 LISGGNDKLVKVWDCSRFQGVQTSINNDLLIKNINLNKKVNWLCTTPTESENLVVC---- 337
++SGG D VK+WD + ++T I + N + + ESE +VC
Sbjct: 393 VVSGGYDFTVKIWDAFSGKCLRTLIGHS------------NRVYSLLYESERSIVCSGSL 440
Query: 338 DTSKVVKVYSIS 349
DTS ++V+ S
Sbjct: 441 DTS--IRVWDFS 450
>sp|Q4ICM0|LIS1_GIBZE Nuclear distribution protein PAC1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PAC1 PE=3
SV=2
Length = 460
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 90 PASWRPLESYNY----NKEEINQIVCNPKSSFLACADDGGDVKIIDIRQHCLYKSLRAGH 145
P+SW P + ++ IN + +P S +A D+ +KI D L ++++ GH
Sbjct: 97 PSSWLPAGPPRHVLQSHRTPINCVAFHPIFSSIASGDEDATIKIWDWEFGELERTVK-GH 155
Query: 146 SSICSSVQFIPWKPWEGLPENNGNAGQCYNPAFVHAIAIPDADMLDKTNKICVVAKGDGV 205
+ + + G P+ + C + + I D ++ I + D
Sbjct: 156 TKAVLDLDY-------GGPKGHTLLASCSS-----DLTIKLWDPANEYQNIRTLPGHDHS 203
Query: 206 VDVINIESELNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQSGGKRLHLDYSVGGHTA 265
V S + S + PL G+ S RD + I D + G + ++ GH
Sbjct: 204 V------SAVRFIPSGAPGAPLSGNLLASAS--RDVTVRIWDVTTG---YCVKTIRGHAD 252
Query: 266 AASCVAFSMFGERGKYLISGGNDKLVKVWDCS 297
V+ S+ GKYL+S GND+ V++WD S
Sbjct: 253 WIRDVSPSL---DGKYLLSTGNDRTVRLWDIS 281
>sp|Q9JMJ4|PRP19_RAT Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2
SV=2
Length = 504
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 262 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT-SINNDLLIKNINLNKK 320
GH+ + +AFS E G YL + +D VK+WD + + +T ++N+ +K++ ++
Sbjct: 390 GHSGPITSIAFS---ENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQS 446
Query: 321 VNWLC 325
+L
Sbjct: 447 GTYLA 451
>sp|Q99KP6|PRP19_MOUSE Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1
Length = 504
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 262 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT-SINNDLLIKNINLNKK 320
GH+ + +AFS E G YL + +D VK+WD + + +T ++N+ +K++ ++
Sbjct: 390 GHSGPITSIAFS---ENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQS 446
Query: 321 VNWLC 325
+L
Sbjct: 447 GTYLA 451
>sp|Q08E38|PRP19_BOVIN Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1
Length = 504
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 262 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT-SINNDLLIKNINLNKK 320
GH+ + +AFS E G YL + +D VK+WD + + +T ++N+ +K++ ++
Sbjct: 390 GHSGPITSIAFS---ENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQS 446
Query: 321 VNWLC 325
+L
Sbjct: 447 GTYLA 451
>sp|Q9UMS4|PRP19_HUMAN Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1
Length = 504
Score = 38.9 bits (89), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 262 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT-SINNDLLIKNINLNKK 320
GH+ + +AFS E G YL + +D VK+WD + + +T ++N+ +K++ ++
Sbjct: 390 GHSGPITSIAFS---ENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQS 446
Query: 321 VNWLC 325
+L
Sbjct: 447 GTYLA 451
>sp|Q5ZMA2|PRP19_CHICK Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1
Length = 505
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 262 GHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQT-SINNDLLIKNINLNKK 320
GH+ + +AFS E G YL + +D VK+WD + + +T ++N+ +K++ ++
Sbjct: 391 GHSGPITSIAFS---ENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQS 447
Query: 321 VNWLC 325
+L
Sbjct: 448 GTYLA 452
>sp|Q758R7|MDV1_ASHGO Mitochondrial division protein 1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MDV1
PE=3 SV=1
Length = 715
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 259 SVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINNDLLIKN---- 314
S+ GH A SC+ + LI+GG D L+K+WD +Q +I+ND + +
Sbjct: 449 SITGHLATVSCMQMDQYNT----LITGGRDALLKMWD------IQKAIDNDSIPSDEVCI 498
Query: 315 INLNKKVNWLCTTPTESENLVVCDTSKVVKVYSIS 349
+ ++ + E+ NLV + ++ + ++
Sbjct: 499 YTFDSHIDEITALSFEANNLVSGSQDRTIRQWDLN 533
>sp|Q5TAQ9|DCAF8_HUMAN DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1
SV=1
Length = 597
Score = 38.9 bits (89), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 252 KRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGV 302
+R L + + GHT CV F +RG +L SG +D V VWD R Q V
Sbjct: 181 QRFRLQHGLEGHTG---CVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPV 228
>sp|Q5U2M6|DCAF8_RAT DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus GN=Dcaf8
PE=2 SV=1
Length = 591
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 252 KRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGV 302
+R L + + GHT CV F +RG +L SG +D V VWD R Q V
Sbjct: 175 QRFRLQHGLEGHTG---CVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPV 222
>sp|Q10281|GBLP_SCHPO Guanine nucleotide-binding protein subunit beta-like protein
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rkp1 PE=1 SV=3
Length = 314
Score = 38.5 bits (88), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 191 DKTNKICVVAKGDGVVDVINIESE-LNISRSKSTTKPLKGSQSTSKVNIRDAEMEILDQS 249
DKT ++ + KG+ + S+ L++S S + + GS RD ++I +
Sbjct: 84 DKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGS--------RDKTIKIWNII 135
Query: 250 GGKRLHLDYSVGGHTAAASCVAFSMFGERGKYLISGGNDKLVKVWDCSRFQGVQTSINND 309
G + + + GGH+ SCV FS + + +S G DK VKVWD F + +
Sbjct: 136 GNCKYTI--TDGGHSDWVSCVRFSPNPDNLTF-VSAGWDKAVKVWDLETFSLRTSHYGHT 192
Query: 310 LLIKNINLNKKVNWLCTTPTESENLVVCDTSKVVKVYSI 348
+ + ++ + LC + L++ D ++ +YS+
Sbjct: 193 GYVSAVTISPDGS-LCASGGRDGTLMLWDLNESTHLYSL 230
Score = 36.2 bits (82), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 118/333 (35%), Gaps = 74/333 (22%)
Query: 11 LRGHKATATCCIASRDRPGFVASSGEDGCICWFDLRSKDVQLVTD----VGNGPVTSLCF 66
L GH T + + P + S D I ++L DV G+ S C
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDC- 69
Query: 67 KSGNEDIIYVSSGKEVKSFDVH--MPASW-RPLESYNYNKEE-----------INQIVCN 112
SFD H + ASW + + ++ K E + + +
Sbjct: 70 ---------------ALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSIS 114
Query: 113 PKSSFLACADDGGDVKIIDIRQHCLYKSLRAGHSSICSSVQFIP-----------W---- 157
P + + +KI +I +C Y GHS S V+F P W
Sbjct: 115 PDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAV 174
Query: 158 KPWEGLPENNGNAGQCYNPAFVHAIAI-PDADMLDKTNKICVVAKGDGVVDV--INIESE 214
K W+ L + + +V A+ I PD + C DG + + +N +
Sbjct: 175 KVWD-LETFSLRTSHYGHTGYVSAVTISPDGSL-------CASGGRDGTLMLWDLNESTH 226
Query: 215 LNISRSKSTTKPLKGS--------QSTSKVNIRDAEMEILDQSGGKRLHLDY-SVGGHTA 265
L +K+ L S + S + I D E Q L +D+ VG ++
Sbjct: 227 LYSLEAKANINALVFSPNRYWLCAATGSSIRIFDLET----QEKVDELTVDFVGVGKKSS 282
Query: 266 AASCVAFSMFGERGKYLISGGNDKLVKVWDCSR 298
C++ + + G+ L SG D L++VW ++
Sbjct: 283 EPECISLT-WSPDGQTLFSGWTDNLIRVWQVTK 314
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,288,189
Number of Sequences: 539616
Number of extensions: 5836148
Number of successful extensions: 16302
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 14992
Number of HSP's gapped (non-prelim): 1671
length of query: 349
length of database: 191,569,459
effective HSP length: 118
effective length of query: 231
effective length of database: 127,894,771
effective search space: 29543692101
effective search space used: 29543692101
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)