Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>018859
MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGRLSLNRWSTNRKFQLKAVRDSASSNE
DQNLESGKVAVAADTKTKDPVAKFQETLISLPPVAFVMKRHTRSSFAIGLSLSTAFLVIV
VRAFIVRRSRYNRPGSVEDLVRRGQLRSDRRGISRPLKYEDPFNNPLVKVGKSNSTMEMC
GKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPPDVDPDTVRWIPANHPF
ATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQKLNKLVIDSSNAKDFE
RAFKLNPKSEEPLDQNPFVNQSGDLRPPRPDQAPNGYDSNSSSEEMQKP

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  018859
        (349 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030512 - symbol:MCD1 "AT1G20830" species:3702...   954  5.9e-96   1


>TAIR|locus:2030512 [details] [associations]
            symbol:MCD1 "AT1G20830" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0009706 "chloroplast inner
            membrane" evidence=IDA] [GO:0010020 "chloroplast fission"
            evidence=IMP] EMBL:CP002684 GO:GO:0009706 GO:GO:0010020
            EMBL:BT006034 EMBL:AK118972 IPI:IPI00527413 RefSeq:NP_173507.1
            UniGene:At.41684 PaxDb:Q8GWA7 PRIDE:Q8GWA7
            EnsemblPlants:AT1G20830.1 GeneID:838675 KEGG:ath:AT1G20830
            TAIR:At1g20830 eggNOG:NOG256126 InParanoid:Q8GWA7 OMA:YVVRKSR
            PhylomeDB:Q8GWA7 ProtClustDB:CLSN2679435 ArrayExpress:Q8GWA7
            Genevestigator:Q8GWA7 Uniprot:Q8GWA7
        Length = 349

 Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
 Identities = 204/341 (59%), Positives = 256/341 (75%)

Query:     1 MASIWTLQFHSLYFPHRVSSTVAKLRTEFTLSQGR---LSLN--RWSTNRKFQLKAVRDS 55
             MASI +LQFHSL    + S   AKL+   +L   R   ++LN  ++ T   F  KA+ DS
Sbjct:     1 MASIDSLQFHSLC-NLQSSIGRAKLQNPSSLVIFRRRPVNLNWVQFETKGSFVCKAIGDS 59

Query:    56 ASSNED-QNLESGK--VAVAADTKTKDP------VAKFQETLISLPPVAFVMKRHTRSSF 106
             ++ +ED QN +S    V V A T++  P      +++F+  + +LPPV F+MK+ + +S 
Sbjct:    60 STPDEDIQNTQSDDNVVVVTATTQSDIPHDSEYSISRFRSMVTTLPPVVFLMKKCSVNSI 119

Query:   107 AIGLSLSTAFLVIVVRAFIVRRSRYN-RPGSVEDLVRRGQLRS-DRRGISRPLKYEDPFN 164
              IG+ ++   LV  +RA++VR+SR N R GSV DLVRRGQLRS DRRGIS+ L YEDPFN
Sbjct:   120 WIGVCITATVLVAAIRAYVVRKSRDNQRAGSVADLVRRGQLRSGDRRGISKSLNYEDPFN 179

Query:   165 NPLVKVGKSNSTMEMCGKVYRLAPITLTKEQQTIHQKRRSRAYQWKRPTIFLKEGDLIPP 224
             NP VK+ K +ST+EMCGKVYRLAP+TLT+++QTIHQKRRSRAYQWKRPTIFLKEGD IPP
Sbjct:   180 NPFVKLDKGSSTVEMCGKVYRLAPVTLTEKEQTIHQKRRSRAYQWKRPTIFLKEGDSIPP 239

Query:   225 DVDPDTVRWIPANHPFATTANDIDEDLAQNNVYQKQGVPFRIRAEHEALQKKLEALQNEQ 284
             DVDPDTVRWIPANHPFATT +DID+DLAQNNVYQKQGVPFRIRAEHEA+QKKLEALQNE+
Sbjct:   240 DVDPDTVRWIPANHPFATTVSDIDQDLAQNNVYQKQGVPFRIRAEHEAMQKKLEALQNEE 299

Query:   285 KLNKLVIDSSNAKDFERAFKLNPKSE-EPLDQNPFVNQSGD 324
             KLN L IDS NA+DF+R +K + K E E + +N   N +G+
Sbjct:   300 KLNNLSIDSQNARDFQRPYKFSAKLEGENIQKNSQENHTGN 340


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.131   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      349       349   0.00099  116 3  11 22  0.42    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  222 KB (2122 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.17u 0.15s 32.32t   Elapsed:  00:00:01
  Total cpu time:  32.17u 0.15s 32.32t   Elapsed:  00:00:01
  Start:  Fri May 10 07:39:14 2013   End:  Fri May 10 07:39:15 2013

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