Your job contains 1 sequence.
>018860
MDKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGH
KGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG
GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI
VQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYG
NKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG
PVTNDDTETLTANGTIGKVKVTADEVSRKIEGFHIADEGKMKEKEEAAN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018860
(349 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2093182 - symbol:AT3G15610 "AT3G15610" species... 1555 1.2e-159 1
TAIR|locus:2035179 - symbol:AT1G52730 "AT1G52730" species... 1536 1.3e-157 1
TAIR|locus:2037818 - symbol:AT1G15470 "AT1G15470" species... 1415 8.4e-145 1
ZFIN|ZDB-GENE-040426-1110 - symbol:strap "serine/threonin... 818 1.5e-81 1
DICTYBASE|DDB_G0286457 - symbol:strap "putative serine-th... 806 2.9e-80 1
UNIPROTKB|Q5E959 - symbol:STRAP "Serine-threonine kinase ... 783 7.9e-78 1
UNIPROTKB|E2RBU1 - symbol:STRAP "Uncharacterized protein"... 783 7.9e-78 1
UNIPROTKB|Q9Y3F4 - symbol:STRAP "Serine-threonine kinase ... 783 7.9e-78 1
MGI|MGI:1329037 - symbol:Strap "serine/threonine kinase r... 782 1.0e-77 1
RGD|1311114 - symbol:Strap "serine/threonine kinase recep... 782 1.0e-77 1
FB|FBgn0034876 - symbol:wmd "wing morphogenesis defect" s... 779 2.1e-77 1
UNIPROTKB|Q5ZL33 - symbol:STRAP "Serine-threonine kinase ... 777 3.4e-77 1
UNIPROTKB|B4DNJ6 - symbol:STRAP "Serine-threonine kinase ... 750 2.5e-74 1
UNIPROTKB|I3LNC4 - symbol:STRAP "Uncharacterized protein"... 743 1.4e-73 1
ASPGD|ASPL0000068374 - symbol:AN7705 species:162425 "Emer... 395 2.0e-61 2
UNIPROTKB|B0AZV0 - symbol:STRAP "cDNA, FLJ79540, highly s... 455 4.5e-43 1
UNIPROTKB|G5EI73 - symbol:MGCH7_ch7g141 "Serine-threonine... 381 3.1e-35 1
FB|FBgn0033440 - symbol:CG10459 species:7227 "Drosophila ... 363 2.5e-33 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 355 4.7e-31 1
UNIPROTKB|F1MUW4 - symbol:APAF1 "Uncharacterized protein"... 299 3.9e-25 1
TAIR|locus:2062994 - symbol:AT2G46290 "AT2G46290" species... 284 5.9e-25 1
FB|FBgn0015834 - symbol:Trip1 "Trip1" species:7227 "Droso... 283 7.6e-25 1
TAIR|locus:2063009 - symbol:TRIP-1 "AT2G46280" species:37... 275 5.3e-24 1
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 288 5.7e-24 1
UNIPROTKB|J9NS21 - symbol:APAF1 "Apoptotic protease-activ... 286 9.4e-24 1
UNIPROTKB|F1Q410 - symbol:APAF1 "Apoptotic protease-activ... 286 9.5e-24 1
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 280 4.1e-23 1
UNIPROTKB|F1SQT5 - symbol:APAF1 "Uncharacterized protein"... 278 6.7e-23 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 280 7.1e-23 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 259 2.6e-22 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 259 2.6e-22 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 259 2.6e-22 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 259 2.6e-22 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 259 2.6e-22 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 259 2.6e-22 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 259 2.6e-22 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 258 3.4e-22 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 256 5.5e-22 1
UNIPROTKB|O14727 - symbol:APAF1 "Apoptotic protease-activ... 269 6.1e-22 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 262 8.4e-22 1
POMBASE|SPAC4D7.05 - symbol:sum1 "translation initiation ... 254 9.0e-22 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 254 9.0e-22 1
CGD|CAL0006083 - symbol:TIF34 species:5476 "Candida albic... 187 6.6e-21 2
UNIPROTKB|Q5AI86 - symbol:TIF34 "Eukaryotic translation i... 187 6.6e-21 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 252 2.3e-20 1
UNIPROTKB|Q5EBE8 - symbol:eif3i "Eukaryotic translation i... 240 2.7e-20 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 238 4.4e-20 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 238 4.4e-20 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 253 4.9e-20 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 243 4.6e-19 1
UNIPROTKB|A4RDD7 - symbol:TIF34 "Eukaryotic translation i... 238 6.2e-19 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 241 6.9e-19 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 241 6.9e-19 1
UNIPROTKB|Q66J51 - symbol:eif3i "Eukaryotic translation i... 234 7.7e-19 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 243 1.1e-18 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 241 2.3e-18 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 236 2.5e-18 1
RGD|1560498 - symbol:Eif3i-ps1 "eukaryotic translation in... 231 2.8e-18 1
UNIPROTKB|Q13347 - symbol:EIF3I "Eukaryotic translation i... 230 4.5e-18 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 237 5.9e-18 1
MGI|MGI:1860763 - symbol:Eif3i "eukaryotic translation in... 229 6.4e-18 1
UNIPROTKB|F1PPR0 - symbol:EIF3I "Uncharacterized protein"... 229 6.4e-18 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 233 7.7e-18 1
UNIPROTKB|F1SV90 - symbol:EIF3I "Uncharacterized protein"... 228 8.9e-18 1
UNIPROTKB|Q5R7R2 - symbol:EIF3I "Eukaryotic translation i... 228 8.9e-18 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 227 9.6e-18 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 235 1.3e-17 1
UNIPROTKB|Q5E966 - symbol:EIF3I "Eukaryotic translation i... 227 1.4e-17 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 234 1.7e-17 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 231 2.3e-17 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 226 2.7e-17 1
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 227 3.5e-17 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 229 4.3e-17 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 229 5.6e-17 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 230 5.7e-17 1
UNIPROTKB|E1C6T8 - symbol:EIF3I "Uncharacterized protein"... 222 7.6e-17 1
UNIPROTKB|B5FZ19 - symbol:EIF3I "Eukaryotic translation i... 222 7.6e-17 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 227 7.9e-17 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 225 8.7e-17 1
GENEDB_PFALCIPARUM|MAL7P1.81 - symbol:MAL7P1.81 "eukaryot... 153 9.7e-17 2
UNIPROTKB|Q8IBT2 - symbol:MAL7P1.81 "Eukaryotic translati... 153 9.7e-17 2
UNIPROTKB|Q5IH81 - symbol:EIF3I "Eukaryotic translation i... 221 1.4e-16 1
ZFIN|ZDB-GENE-040426-1922 - symbol:eif3i "eukaryotic tran... 220 1.4e-16 1
DICTYBASE|DDB_G0277143 - symbol:gpbA "G protein b" specie... 221 1.9e-16 1
WB|WBGene00001232 - symbol:eif-3.I species:6239 "Caenorha... 218 2.9e-16 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 221 4.4e-16 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 220 6.2e-16 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 222 9.1e-16 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 225 9.1e-16 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 219 9.9e-16 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 222 1.0e-15 1
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 222 1.0e-15 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 222 1.1e-15 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 222 1.3e-15 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 222 1.3e-15 1
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 222 1.5e-15 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 214 1.8e-15 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 216 2.0e-15 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 219 2.0e-15 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 213 2.4e-15 1
WARNING: Descriptions of 983 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2093182 [details] [associations]
symbol:AT3G15610 "AT3G15610" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AB017071 HSSP:P16649
HOGENOM:HOG000174258 KO:K13137 OMA:LFDFHTG UniGene:At.53327
EMBL:BT002047 EMBL:BT003420 IPI:IPI00539786 RefSeq:NP_566519.1
UniGene:At.43109 ProteinModelPortal:Q9LW17 SMR:Q9LW17 STRING:Q9LW17
PaxDb:Q9LW17 PRIDE:Q9LW17 EnsemblPlants:AT3G15610.1 GeneID:820803
KEGG:ath:AT3G15610 TAIR:At3g15610 InParanoid:Q9LW17
PhylomeDB:Q9LW17 ProtClustDB:CLSN2687815 ArrayExpress:Q9LW17
Genevestigator:Q9LW17 Uniprot:Q9LW17
Length = 341
Score = 1555 (552.4 bits), Expect = 1.2e-159, P = 1.2e-159
Identities = 288/348 (82%), Positives = 308/348 (88%)
Query: 1 MDKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGH 60
M+KKK+A PLVCHGHSRPVVDLFYSPITPDGFFLISASKDS PMLRNGETGDWIGTFEGH
Sbjct: 1 MEKKKVATPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGH 60
Query: 61 KGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG 120
KGAVWS CLD NALRAASASADFSAK+WDALTGDVLHSFEHKHIVRAC+FS+DT L+TG
Sbjct: 61 KGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITG 120
Query: 121 GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI 180
G EKILR+FDLNR DAPP E+D+SPGS+RT+ WLH DQTILS+CTD+GGVRLWDVRSG+I
Sbjct: 121 GFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKI 180
Query: 181 VQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYG 240
VQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSY+MPC IESASLEPK G
Sbjct: 181 VQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSG 240
Query: 241 NKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300
NKFVAGGEDMWVR FDFHTG EI CNKGHHGPVHCVRF+P GESYASGSEDGTIRIWQTG
Sbjct: 241 NKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQTG 300
Query: 301 PVTNDDTETLTANGTIGKVKVTADEVSRKIEGFHIADEGKMKEKEEAA 348
PV ++ K K + DEV+RKIEGFHI EGK EK A
Sbjct: 301 PVNPEEISE-------SKPKQSVDEVARKIEGFHINKEGKTAEKPSDA 341
>TAIR|locus:2035179 [details] [associations]
symbol:AT1G52730 "AT1G52730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 HSSP:P16649 EMBL:AC008016
HOGENOM:HOG000174258 KO:K13137 ProtClustDB:CLSN2687815
EMBL:BT008315 EMBL:AK227970 EMBL:AK317364 IPI:IPI00547978
RefSeq:NP_175682.2 RefSeq:NP_849800.1 UniGene:At.28102
UniGene:At.67869 ProteinModelPortal:Q9SSS7 SMR:Q9SSS7 IntAct:Q9SSS7
STRING:Q9SSS7 PaxDb:Q9SSS7 PRIDE:Q9SSS7 DNASU:841706
EnsemblPlants:AT1G52730.1 EnsemblPlants:AT1G52730.2 GeneID:841706
KEGG:ath:AT1G52730 TAIR:At1g52730 InParanoid:Q9SSS7 OMA:EDMWVRV
PhylomeDB:Q9SSS7 Genevestigator:Q9SSS7 Uniprot:Q9SSS7
Length = 343
Score = 1536 (545.8 bits), Expect = 1.3e-157, P = 1.3e-157
Identities = 285/344 (82%), Positives = 307/344 (89%)
Query: 1 MDKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGH 60
M+KKK+ +P VCHGHSRPVVDLFYSPITPDGFFLISASKDS PMLRNGETGDWIGTFEGH
Sbjct: 1 MEKKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGH 60
Query: 61 KGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG 120
KGAVWS CLD NALRAASASADFSAK+WDALTGDVLHSFEHKHIVRAC+FSEDT LLTG
Sbjct: 61 KGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTG 120
Query: 121 GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI 180
G EKILR+FD+NR DAPP EVD+SPGS+RT+ WLHSDQTILS+CTD+GGVRLWDVRSG+I
Sbjct: 121 GFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKI 180
Query: 181 VQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYG 240
VQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSY+MPC IESASLEPK G
Sbjct: 181 VQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSG 240
Query: 241 NKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300
KFVAGGEDMWVR FDF+TG EI CNKGHHGPVHCVRF+P G SYASGSEDGTIRIWQT
Sbjct: 241 EKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTT 300
Query: 301 PVTNDDTETLTANGTIGKVKVTADEVSRKIEGFHIADEGKMKEK 344
P ++ ET + +VK + DEVS+KIEGFHI EGK EK
Sbjct: 301 PANPEENETSSR-----RVKHSVDEVSKKIEGFHINKEGKTAEK 339
>TAIR|locus:2037818 [details] [associations]
symbol:AT1G15470 "AT1G15470" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:AC007591 GO:GO:0016301
HSSP:P16649 HOGENOM:HOG000174258 KO:K13137 OMA:LWQTTVG
ProtClustDB:CLSN2687815 EMBL:AY084604 EMBL:BT000935 IPI:IPI00536047
RefSeq:NP_563978.1 UniGene:At.11430 ProteinModelPortal:Q9XI22
SMR:Q9XI22 STRING:Q9XI22 PaxDb:Q9XI22 PRIDE:Q9XI22
EnsemblPlants:AT1G15470.1 GeneID:838117 KEGG:ath:AT1G15470
TAIR:At1g15470 InParanoid:Q9XI22 PhylomeDB:Q9XI22
ArrayExpress:Q9XI22 Genevestigator:Q9XI22 Uniprot:Q9XI22
Length = 333
Score = 1415 (503.2 bits), Expect = 8.4e-145, P = 8.4e-145
Identities = 256/333 (76%), Positives = 289/333 (86%)
Query: 6 IAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVW 65
+ PLVCHGHSRPVVD+ YSP+TPDGFFLISASKDS+PMLRNGETGDWIGTFEGHKGAVW
Sbjct: 1 MGAPLVCHGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVW 60
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKI 125
SC LD NA+RAASASADF+AK+W+ALTGD LHSFEHKHIVRAC+FSEDTH LLTGGMEKI
Sbjct: 61 SCSLDKNAIRAASASADFTAKIWNALTGDELHSFEHKHIVRACAFSEDTHRLLTGGMEKI 120
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE 185
LRIFDLNRPDAPP+EV SPGS+RTV WLHSD TILS+CTD G +RLWD+RS +IV TLE
Sbjct: 121 LRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLE 180
Query: 186 TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA 245
TKSPVTSAEVSQDGRYITTADGS+VKFWDA +FGL+KSY+MPC +ESASLEPK+GN F+A
Sbjct: 181 TKSPVTSAEVSQDGRYITTADGSSVKFWDAKNFGLLKSYDMPCNVESASLEPKHGNTFIA 240
Query: 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTND 305
GGEDMWV FDF TG EI CNKGHHGPVHCVR++PGGESY SGSEDGT+RIW G V +
Sbjct: 241 GGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHP 300
Query: 306 DTETLTANGTIGKVKVTADEVSRKIEGFHIADE 338
+ L+ G VK+ A+EV RK E I+++
Sbjct: 301 EESNLS-----GHVKLVAEEVVRKAESLRISEK 328
>ZFIN|ZDB-GENE-040426-1110 [details] [associations]
symbol:strap "serine/threonine kinase receptor
associated protein" species:7955 "Danio rerio" [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1110 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016301 HSSP:P16649
GeneTree:ENSGT00630000089849 EMBL:BX649476 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG
OrthoDB:EOG4CRM0M EMBL:BC049525 EMBL:BC065428 IPI:IPI00506790
RefSeq:NP_956598.1 UniGene:Dr.12320 STRING:Q7ZW92 DNASU:393274
Ensembl:ENSDART00000013224 Ensembl:ENSDART00000124627 GeneID:393274
KEGG:dre:393274 InParanoid:Q7ZW92 NextBio:20814331 Uniprot:Q7ZW92
Length = 329
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 153/291 (52%), Positives = 207/291 (71%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL C GH+RPVVDL +S ITP G+FLISA KD PMLR G+TGDWIGTF GHKGAVW
Sbjct: 7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGAT 66
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
L+T A +AA+A+ADF+AKVWDA+TGD + + HKHIV++ +F++D++ LLTGG +K+LRI
Sbjct: 67 LNTEATKAATAAADFTAKVWDAVTGDEVLTLAHKHIVKSVNFTQDSNYLLTGGNDKVLRI 126
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
+DL++P+A P+E+ +++ W ++DQ ILS D +RLWD + E V+TL +
Sbjct: 127 YDLSKPEAEPQEIAGHTSAIKKALWCNNDQQILSAADDKT-IRLWDKNTNEAVKTLSFDA 185
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGE 248
V+S E DG + G T+ F++A+ L+K+ + P +I SASL P + FVAGG+
Sbjct: 186 SVSSMEYIPDGETLVITYGRTIAFYNAHSLDLIKTVDAPASIHSASLHPDK-DFFVAGGD 244
Query: 249 DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
D + +D+ T E+ KGH GPVHCVRFSP GE YASGSEDGT+R+WQT
Sbjct: 245 DFKLYKYDYTTKEEMESYKGHFGPVHCVRFSPDGELYASGSEDGTLRLWQT 295
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 153/291 (52%), Positives = 199/291 (68%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL+C GHSRPV DL +S DG F++SA D SPMLRNGE GDWIGTFEGHKGAVWS
Sbjct: 4 PLICSGHSRPVSDLSFSNENSDGSFIVSACLDGSPMLRNGENGDWIGTFEGHKGAVWSSR 63
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
++ A +A +ASAD++ K+WD L G + S EH+ IV+ FS + ++TGG EKILRI
Sbjct: 64 FNSTASQALTASADYTVKLWDTLNGSEILSIEHQSIVKTADFSNNNSRVVTGGSEKILRI 123
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAW-LHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187
FDL RP+ P ++ +++T W +H+D +LS D +R+WD+RSG V +L K
Sbjct: 124 FDLERPNDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEV-IRIWDLRSGTQV-SLCAK 181
Query: 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGG 247
S +TS E S+D R++ T G+ V FWDA F +K Y++P + ASL P +KF+AGG
Sbjct: 182 SSITSMEFSKDRRFLVTTAGNEVTFWDAQSFYPLKVYSLPFDVNCASLHPD-NSKFIAGG 240
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
D WV +DF TGNEI NKGHHGPV+C RFSP G S+ASGS DGTIR+W+
Sbjct: 241 SDFWVHVYDFSTGNEIEVNKGHHGPVNCCRFSPDGASFASGSLDGTIRLWK 291
>UNIPROTKB|Q5E959 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9913 "Bos taurus" [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849
EMBL:BT021061 EMBL:BC119959 IPI:IPI00698102 RefSeq:NP_001015567.1
UniGene:Bt.17089 ProteinModelPortal:Q5E959 STRING:Q5E959
PRIDE:Q5E959 Ensembl:ENSBTAT00000018840 GeneID:510201
KEGG:bta:510201 CTD:11171 HOGENOM:HOG000174258 HOVERGEN:HBG055228
InParanoid:Q5E959 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
NextBio:20869325 Uniprot:Q5E959
Length = 350
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 150/292 (51%), Positives = 199/292 (68%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL C GH+RPVVDL +S ITP G+FLISA KD PMLR G+TGDWIGTF GHKGAVW
Sbjct: 7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGAT 66
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
L+ +A +AA+A+ADF+AKVWDA++GD L + HKHIV+ F++D++ LLTGG +K+LRI
Sbjct: 67 LNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQDKLLRI 126
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
+DLN+P+A P+E+ ++ W D+ ILS D VRLWD + V++L
Sbjct: 127 YDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSA--DDKTVRLWDHATMTEVKSLNFNM 184
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV-AGG 247
V+S E +G + G ++ F A +KS+ P TI SASL P+ +FV AGG
Sbjct: 185 SVSSMEYIPEGEILVITYGRSIAFHSAVSLDPIKSFEAPATINSASLHPE--KEFVVAGG 242
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
ED + +D+++G E+ KGH GP+HCVRFSP GE YASGSEDGT+R+WQT
Sbjct: 243 EDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
>UNIPROTKB|E2RBU1 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000122 GO:GO:0030512 GeneTree:ENSGT00630000089849 CTD:11171
KO:K13137 OMA:LWQTTVG EMBL:AAEX03015237 RefSeq:XP_543790.1
ProteinModelPortal:E2RBU1 Ensembl:ENSCAFT00000020131 GeneID:486663
KEGG:cfa:486663 Uniprot:E2RBU1
Length = 350
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 150/292 (51%), Positives = 199/292 (68%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL C GH+RPVVDL +S ITP G+FLISA KD PMLR G+TGDWIGTF GHKGAVW
Sbjct: 7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGAT 66
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
L+ +A +AA+A+ADF+AKVWDA++GD L + HKHIV+ F++D++ LLTGG +K+LRI
Sbjct: 67 LNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQDKLLRI 126
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
+DLN+P+A P+E+ ++ W D+ ILS D VRLWD + V++L
Sbjct: 127 YDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSA--DDKTVRLWDHATMTEVKSLNFNM 184
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKF-VAGG 247
V+S E +G + G ++ F A +KS+ P TI SASL P+ +F VAGG
Sbjct: 185 SVSSMEYIPEGEILVITYGRSIAFHSAVSLDPIKSFEAPATINSASLHPE--KEFLVAGG 242
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
ED + +D+++G E+ KGH GP+HCVRFSP GE YASGSEDGT+R+WQT
Sbjct: 243 EDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
>UNIPROTKB|Q9Y3F4 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0005634 Reactome:REACT_111102
Pathway_Interaction_DB:tgfbrpathway GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0007179 EMBL:CH471094 GO:GO:0030512 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:AJ010025 EMBL:AB024327 EMBL:AF161496 EMBL:AY049776
EMBL:AL136691 EMBL:BT020044 EMBL:BT020045 EMBL:AK312295
EMBL:BC000162 EMBL:BC062306 IPI:IPI00941907 RefSeq:NP_009109.3
UniGene:Hs.504895 ProteinModelPortal:Q9Y3F4 SMR:Q9Y3F4
IntAct:Q9Y3F4 MINT:MINT-1346033 STRING:Q9Y3F4 PhosphoSite:Q9Y3F4
DMDM:12643951 OGP:Q9Y3F4 PaxDb:Q9Y3F4 PeptideAtlas:Q9Y3F4
PRIDE:Q9Y3F4 DNASU:11171 Ensembl:ENST00000419869 GeneID:11171
KEGG:hsa:11171 UCSC:uc001rdc.4 GeneCards:GC12P016035
HGNC:HGNC:30796 HPA:HPA027320 MIM:605986 neXtProt:NX_Q9Y3F4
PharmGKB:PA134867032 InParanoid:Q9Y3F4 PhylomeDB:Q9Y3F4
ChiTaRS:STRAP GenomeRNAi:11171 NextBio:42509 ArrayExpress:Q9Y3F4
Bgee:Q9Y3F4 CleanEx:HS_STRAP Genevestigator:Q9Y3F4
GermOnline:ENSG00000023734 Uniprot:Q9Y3F4
Length = 350
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 150/292 (51%), Positives = 199/292 (68%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL C GH+RPVVDL +S ITP G+FLISA KD PMLR G+TGDWIGTF GHKGAVW
Sbjct: 7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGAT 66
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
L+ +A +AA+A+ADF+AKVWDA++GD L + HKHIV+ F++D++ LLTGG +K+LRI
Sbjct: 67 LNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQDKLLRI 126
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
+DLN+P+A P+E+ ++ W D+ ILS D VRLWD + V++L
Sbjct: 127 YDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSA--DDKTVRLWDHATMTEVKSLNFNM 184
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKF-VAGG 247
V+S E +G + G ++ F A +KS+ P TI SASL P+ +F VAGG
Sbjct: 185 SVSSMEYIPEGEILVITYGRSIAFHSAVSLDPIKSFEAPATINSASLHPE--KEFLVAGG 242
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
ED + +D+++G E+ KGH GP+HCVRFSP GE YASGSEDGT+R+WQT
Sbjct: 243 EDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
>MGI|MGI:1329037 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005102 "receptor binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1329037 EMBL:AF096285 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005102
GO:GO:0005681 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
ChiTaRS:STRAP EMBL:AK075804 EMBL:AK077504 EMBL:AK145971
EMBL:AK152283 IPI:IPI00918973 RefSeq:NP_035629.2 UniGene:Mm.22584
ProteinModelPortal:Q9Z1Z2 SMR:Q9Z1Z2 STRING:Q9Z1Z2
PhosphoSite:Q9Z1Z2 REPRODUCTION-2DPAGE:IPI00130670
REPRODUCTION-2DPAGE:Q9Z1Z2 PaxDb:Q9Z1Z2 PRIDE:Q9Z1Z2
Ensembl:ENSMUST00000064910 GeneID:20901 KEGG:mmu:20901
NextBio:299765 Bgee:Q9Z1Z2 Genevestigator:Q9Z1Z2
GermOnline:ENSMUSG00000030224 Uniprot:Q9Z1Z2
Length = 350
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 150/292 (51%), Positives = 199/292 (68%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL C GH+RPVVDL +S ITP G+FLISA KD PMLR G+TGDWIGTF GHKGAVW
Sbjct: 7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGAT 66
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
L+ +A +AA+A+ADF+AKVWDA++GD L + HKHIV+ F++D++ LLTGG +K+LRI
Sbjct: 67 LNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQDKLLRI 126
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
+DLN+P+A P+E+ ++ W D+ ILS D VRLWD + V++L
Sbjct: 127 YDLNKPEAEPKEISGHTSGIKKALWCSDDKQILSA--DDKTVRLWDHATMTEVKSLNFNM 184
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKF-VAGG 247
V+S E +G + G ++ F A +KS+ P TI SASL P+ +F VAGG
Sbjct: 185 SVSSMEYIPEGEILVITYGRSIAFHSAVSLEPIKSFEAPATINSASLHPE--KEFLVAGG 242
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
ED + +D+++G E+ KGH GP+HCVRFSP GE YASGSEDGT+R+WQT
Sbjct: 243 EDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
>RGD|1311114 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005102 "receptor binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030054 "cell
junction" evidence=ISO] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1311114 GO:GO:0005739 GO:GO:0005886 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:BC083714 IPI:IPI00364585 RefSeq:NP_001011969.1
UniGene:Rn.228807 ProteinModelPortal:Q5XIG8 IntAct:Q5XIG8
STRING:Q5XIG8 PRIDE:Q5XIG8 Ensembl:ENSRNOT00000009923 GeneID:297699
KEGG:rno:297699 UCSC:RGD:1311114 InParanoid:Q5XIG8 NextBio:642559
Genevestigator:Q5XIG8 Uniprot:Q5XIG8
Length = 350
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 150/292 (51%), Positives = 199/292 (68%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL C GH+RPVVDL +S ITP G+FLISA KD PMLR G+TGDWIGTF GHKGAVW
Sbjct: 7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGAT 66
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
L+ +A +AA+A+ADF+AKVWDA++GD L + HKHIV+ F++D++ LLTGG +K+LRI
Sbjct: 67 LNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTGGQDKLLRI 126
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
+DLN+P+A P+E+ ++ W D+ ILS D VRLWD + V++L
Sbjct: 127 YDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSA--DDKTVRLWDHATMTEVKSLNFNM 184
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKF-VAGG 247
V+S E +G + G ++ F A +KS+ P TI SASL P+ +F VAGG
Sbjct: 185 SVSSMEYIPEGEILVITYGRSIAFHSAVSLEPIKSFEAPATINSASLHPE--KEFLVAGG 242
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
ED + +D+++G E+ KGH GP+HCVRFSP GE YASGSEDGT+R+WQT
Sbjct: 243 EDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
>FB|FBgn0034876 [details] [associations]
symbol:wmd "wing morphogenesis defect" species:7227
"Drosophila melanogaster" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007476 GeneTree:ENSGT00630000089849 KO:K13137 OMA:LWQTTVG
EMBL:AY061000 RefSeq:NP_001097436.1 RefSeq:NP_611804.1
UniGene:Dm.3756 SMR:Q9W1N4 STRING:Q9W1N4 EnsemblMetazoa:FBtr0072114
EnsemblMetazoa:FBtr0113112 GeneID:37727 KEGG:dme:Dmel_CG3957
UCSC:CG3957-RA CTD:37727 FlyBase:FBgn0034876 InParanoid:Q9W1N4
OrthoDB:EOG4QBZMZ ChiTaRS:wmd GenomeRNAi:37727 NextBio:805102
Uniprot:Q9W1N4
Length = 328
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 147/292 (50%), Positives = 198/292 (67%)
Query: 8 VPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSC 67
+PL C GH+RPVV L +S I G+FLISA KD SPMLR+G+TGDW+GTFEGHKGAVW+
Sbjct: 9 IPLTCSGHTRPVVHLDFSDICDAGYFLISACKDGSPMLRHGDTGDWVGTFEGHKGAVWNA 68
Query: 68 CLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILR 127
L+ NA AAS +ADF+ KVW+A+TG +HSF+HKHIV++ +F D+ ++TG EK++R
Sbjct: 69 TLNRNATLAASGAADFTGKVWNAVTGAEIHSFQHKHIVKSVAFDRDSENIVTGSNEKLVR 128
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187
+F+L +P+A P E G+++ + D+ I+S D VRLWD +G VQ L+
Sbjct: 129 VFNLEQPEAQPEEYAGHTGAIKRALFCRGDKCIISAAEDKT-VRLWDRMTGIEVQRLQFN 187
Query: 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGG 247
S S E+S D +T + GS++ FW+ + +K +P + SASL P + FV GG
Sbjct: 188 SNPNSLEISSDNHILTISHGSSISFWEIDTLKKLKEVKVPTNVASASLHPDK-HVFVCGG 246
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
ED + FD+ TGNEI KGH GPVH V+FSP GE YASGSEDGT+R+WQT
Sbjct: 247 EDFKMYKFDYITGNEIESFKGHFGPVHSVKFSPDGELYASGSEDGTLRLWQT 298
>UNIPROTKB|Q5ZL33 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9031 "Gallus gallus" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0005102 GO:GO:0005681 GO:GO:0000122 GO:GO:0030512 HSSP:P63005
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M EMBL:AJ719901
IPI:IPI00577361 RefSeq:NP_001006247.2 UniGene:Gga.44357
ProteinModelPortal:Q5ZL33 STRING:Q5ZL33 PRIDE:Q5ZL33
Ensembl:ENSGALT00000021374 GeneID:418175 KEGG:gga:418175
InParanoid:Q5ZL33 NextBio:20821378 Uniprot:Q5ZL33
Length = 350
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 149/291 (51%), Positives = 196/291 (67%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL C GH+RPVVDL +S +TP G+FLISA KD PMLR G+TGDWIGTF GHKGAVW
Sbjct: 7 PLTCSGHTRPVVDLAFSGVTPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGAT 66
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
L+ +A +AA+A+ADF+AKVWDA++GD L + HKHIV++ F++D++ LLTGG +K+LRI
Sbjct: 67 LNKDATKAATAAADFTAKVWDAVSGDELITLAHKHIVKSVDFTQDSNYLLTGGQDKLLRI 126
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
+DL++P+A P V ++ W D+ ILS D VRLWD + V+ L
Sbjct: 127 YDLSKPEAEPDVVSGHTSGIKKALWSSDDKQILSA--DDKTVRLWDRSTMTEVKALNVAM 184
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGE 248
V+S E +G+ + G T+ F A +KS+ P TI SASL P+ VAGGE
Sbjct: 185 SVSSMEYVPEGQILVITYGKTIAFHSAETLEQIKSFEAPATINSASLHPEK-ECLVAGGE 243
Query: 249 DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
D + +D++TG E+ KGH GP+HCVRFSP GE YASGSEDGT+R+WQT
Sbjct: 244 DFKLYKYDYNTGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
>UNIPROTKB|B4DNJ6 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0016301 "kinase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0030054 "cell
junction" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005739 GO:GO:0005886 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0016301 HOGENOM:HOG000174258
HOVERGEN:HBG055228 OMA:LWQTTVG UniGene:Hs.504895 HGNC:HGNC:30796
ChiTaRS:STRAP EMBL:AC022073 EMBL:AK297942 IPI:IPI00294536
SMR:B4DNJ6 IntAct:B4DNJ6 STRING:B4DNJ6 Ensembl:ENST00000025399
UCSC:uc010shw.2 Uniprot:B4DNJ6
Length = 363
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 150/305 (49%), Positives = 199/305 (65%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASK-------------DSSPMLRNGETGDWIG 55
PL C GH+RPVVDL +S ITP G+FLISA K D PMLR G+TGDWIG
Sbjct: 7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKGAGQHLPRLSGQHDGKPMLRQGDTGDWIG 66
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTH 115
TF GHKGAVW L+ +A +AA+A+ADF+AKVWDA++GD L + HKHIV+ F++D++
Sbjct: 67 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSN 126
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LLTGG +K+LRI+DLN+P+A P+E+ ++ W D+ ILS D VRLWD
Sbjct: 127 YLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQILSA--DDKTVRLWDH 184
Query: 176 RSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASL 235
+ V++L V+S E +G + G ++ F A +KS+ P TI SASL
Sbjct: 185 ATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLDPIKSFEAPATINSASL 244
Query: 236 EPKYGNKF-VAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
P+ +F VAGGED + +D+++G E+ KGH GP+HCVRFSP GE YASGSEDGT+
Sbjct: 245 HPE--KEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTL 302
Query: 295 RIWQT 299
R+WQT
Sbjct: 303 RLWQT 307
>UNIPROTKB|I3LNC4 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030512 "negative regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 OMA:LWQTTVG EMBL:FP325218
Ensembl:ENSSSCT00000023218 Uniprot:I3LNC4
Length = 363
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 149/305 (48%), Positives = 198/305 (64%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKD-------------SSPMLRNGETGDWIG 55
PL C GH+RPVVDL +S ITP G+FLISA K PMLR G+TGDWIG
Sbjct: 7 PLTCSGHTRPVVDLAFSGITPYGYFLISACKGFTVHLPRRPGQHHGKPMLRQGDTGDWIG 66
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTH 115
TF GHKGAVW L+ +A +AA+A+ADF+AKVWDA++GD L + HKHIV+ F++D++
Sbjct: 67 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSN 126
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LLTGG +K+LRI+DLN+P+A P+E+ ++ W D+ ILS D VRLWD
Sbjct: 127 YLLTGGQDKLLRIYDLNKPEAEPKEISGHSSGIKKALWCSEDKQILSA--DDKTVRLWDH 184
Query: 176 RSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASL 235
+ V++L V+S E +G + G ++ F A +KS+ P TI SASL
Sbjct: 185 ATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAISLDPIKSFEAPATINSASL 244
Query: 236 EPKYGNKF-VAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
P+ +F VAGGED + +D+++G E+ KGH GP+HCVRFSP GE YASGSEDGT+
Sbjct: 245 HPE--KEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTL 302
Query: 295 RIWQT 299
R+WQT
Sbjct: 303 RLWQT 307
>ASPGD|ASPL0000068374 [details] [associations]
symbol:AN7705 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001304 EMBL:AACD01000131
HOGENOM:HOG000174258 KO:K13137 RefSeq:XP_680974.1
ProteinModelPortal:Q5AVH5 STRING:Q5AVH5
EnsemblFungi:CADANIAT00000837 GeneID:2869479 KEGG:ani:AN7705.2
OMA:LFDFHTG OrthoDB:EOG4PRX0H Uniprot:Q5AVH5
Length = 340
Score = 395 (144.1 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 80/135 (59%), Positives = 96/135 (71%)
Query: 2 DKKKIAVPLVCHGHSRPVVDL-FYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGH 60
D K+ VPL CHGHSRPV + F S + D ++L+SA KD++PMLR+G TGDWIGTF GH
Sbjct: 4 DIPKV-VPLTCHGHSRPVPHISFSSTVEDDQYYLVSACKDNNPMLRDGITGDWIGTFLGH 62
Query: 61 KGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSF--SEDTHLLL 118
KGAVW L T+A AA+A+ADFSAKVWD TG LH+ +H HIVRA +F +L
Sbjct: 63 KGAVWQARLSTDANIAATAAADFSAKVWDTHTGQCLHTLQHSHIVRAVAFPLQPSPQVLA 122
Query: 119 TGGMEKILRIFDLNR 133
TGG EK LRIFDL R
Sbjct: 123 TGGYEKKLRIFDLTR 137
Score = 251 (93.4 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 52/160 (32%), Positives = 85/160 (53%)
Query: 146 GSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVS------QDG 199
G+++++ W + D IL+T D +R WD+RS V + + S E++ D
Sbjct: 172 GTIKSIVW-NRDYNILTTAADDRKIRWWDLRSRHPVVEYPVEGNIGSCELNTLATRPNDT 230
Query: 200 RYITTADGSTVKFWDANHFG-LVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258
++ A G +V +D + G L+K + + SA++ +D W R +D H
Sbjct: 231 GILSVAAGKSVYLFDGHTPGRLLKKIDFGYEVASAAVNNDTARLVTGSADDTWARVYDLH 290
Query: 259 TGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
T +E+ KGHHGP+ V FSP G+ Y +GSEDGTI++W+
Sbjct: 291 TDDELEVQKGHHGPIWSVSFSPDGKLYGTGSEDGTIKLWK 330
>UNIPROTKB|B0AZV0 [details] [associations]
symbol:STRAP "cDNA, FLJ79540, highly similar to
Serine-threonine kinase receptor-associatedprotein" species:9606
"Homo sapiens" [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0016301
GO:GO:0000122 GO:GO:0030512 HOVERGEN:HBG055228 UniGene:Hs.504895
HGNC:HGNC:30796 ChiTaRS:STRAP EMBL:AC022073 EMBL:AK315891
IPI:IPI01015342 SMR:B0AZV0 STRING:B0AZV0 Ensembl:ENST00000538352
Uniprot:B0AZV0
Length = 256
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 90/200 (45%), Positives = 126/200 (63%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
HKHIV+ F++D++ LLTGG +K+LRI+DLN+P+A P+E+ ++ W D+ I
Sbjct: 5 HKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQI 64
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGL 220
LS D VRLWD + V++L V+S E +G + G ++ F A
Sbjct: 65 LSA--DDKTVRLWDHATMTEVKSLNFNMSVSSMEYIPEGEILVITYGRSIAFHSAVSLDP 122
Query: 221 VKSYNMPCTIESASLEPKYGNKF-VAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFS 279
+KS+ P TI SASL P+ +F VAGGED + +D+++G E+ KGH GP+HCVRFS
Sbjct: 123 IKSFEAPATINSASLHPE--KEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFS 180
Query: 280 PGGESYASGSEDGTIRIWQT 299
P GE YASGSEDGT+R+WQT
Sbjct: 181 PDGELYASGSEDGTLRLWQT 200
>UNIPROTKB|G5EI73 [details] [associations]
symbol:MGCH7_ch7g141 "Serine-threonine kinase
receptor-associated protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016301 EMBL:CM000230
EMBL:CM001237 KO:K13137 RefSeq:XP_003721358.1
ProteinModelPortal:G5EI73 EnsemblFungi:MGG_10588T0 GeneID:2682201
KEGG:mgr:MGG_10588 Uniprot:G5EI73
Length = 351
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 90/216 (41%), Positives = 124/216 (57%)
Query: 8 VPLVCHGHSRPVVDL-FYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWS 66
VPL CHGHSRPV + F S + +F+ISA KD +PMLR G+TGDWIGTF GHKGAVW
Sbjct: 10 VPLTCHGHSRPVPHINFSSTFESENYFMISACKDGNPMLRQGQTGDWIGTFIGHKGAVWQ 69
Query: 67 CCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTH-LLLTGGMEKI 125
L + AA+ASADFS K+W++ TG+VL + +H+HIVRA ++ +T ++ TGG EK
Sbjct: 70 AKLSPDMSNAATASADFSCKIWNSHTGEVLFTLKHEHIVRAIAYPPNTSDMVATGGFEKK 129
Query: 126 LRIFDLNRPDAP----PREVDRSPGSVRTV-AWLHSD--QTIL------STCTDMGGVRL 172
LR++DL EV + A H+D + I+ T G
Sbjct: 130 LRLWDLQAASKKLAETTEEVAVESSEAHEIGAGTHTDPIKAIVWAPDPTKIITASGKTLR 189
Query: 173 W-DVRSGEIVQTLETKSPVTSAEVSQ-DGRYITTAD 206
W DV + +V+TL + S E SQ D ++ ++D
Sbjct: 190 WFDVPTKSLVKTLVLDDEIKSCESSQLDPQFADSSD 225
Score = 196 (74.1 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 54/166 (32%), Positives = 83/166 (50%)
Query: 148 VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQ-DGRYITTAD 206
++ + W D T + T + +R +DV + +V+TL + S E SQ D ++ ++D
Sbjct: 168 IKAIVWA-PDPTKIITASGKT-LRWFDVPTKSLVKTLVLDDEIKSCESSQLDPQFADSSD 225
Query: 207 ------------GSTVKFWDANHFGL-VKSYNMPCTIESASLEPKYGNKFVAGGED-MWV 252
G TV F+ +K + I S +L+ K KF G E WV
Sbjct: 226 INGGSPVLAVAAGKTVVFFGGRQMNEELKRIKLTHGIASVALDLKQ-RKFAVGEEPGTWV 284
Query: 253 RFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
R + + EI +KGHHGPV + FSP G+ YA+ SEDGTI++W+
Sbjct: 285 RVYSYEDEKEIDVHKGHHGPVWSIAFSPDGKLYATASEDGTIKLWK 330
>FB|FBgn0033440 [details] [associations]
symbol:CG10459 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=ISS] [GO:0005102 "receptor binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00630000089849 RefSeq:NP_610513.2 UniGene:Dm.28171
ProteinModelPortal:A1Z7Y4 SMR:A1Z7Y4 PRIDE:A1Z7Y4
EnsemblMetazoa:FBtr0088468 GeneID:36000 KEGG:dme:Dmel_CG10459
UCSC:CG10459-RA FlyBase:FBgn0033440 InParanoid:A1Z7Y4 OMA:VEHEVEN
OrthoDB:EOG4QBZMX PhylomeDB:A1Z7Y4 GenomeRNAi:36000 NextBio:796270
Bgee:A1Z7Y4 Uniprot:A1Z7Y4
Length = 322
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 100/299 (33%), Positives = 140/299 (46%)
Query: 8 VPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSC 67
+ ++C GHS VV+L ++ G+FL SA D LR+G+TGD I H +VWS
Sbjct: 5 IGVLCPGHSDSVVELSFNRDYDTGYFLASAGLDGVAALRHGDTGDCITHLRKHTDSVWSV 64
Query: 68 CLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG--GMEKI 125
L +A AS AD +VWDAL G L H V + LLTG E
Sbjct: 65 SLSHDAKILASGGADCKVRVWDALLGKQLKKLRHTKTVACVDLNPKATRLLTGCIDQESP 124
Query: 126 LRIFDLNRPD-APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL 184
L +FD+ + + AP E VR V + + LS+ D VR+WD R+G ++
Sbjct: 125 LALFDMEQSEKAPLMEFRGHSRGVRDVIFCLEEHCFLSSSYDRT-VRMWDCRTGTRTNSI 183
Query: 185 ETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV 244
V S E+ G +T A V F D F ++K +P + +ASL P G +V
Sbjct: 184 FLPHHVKSLELHHSGDIVTIAYAGGVIFLDPKSFEVLKHRKLPYKVTAASLSPNKGI-YV 242
Query: 245 AGGEDMWVRF-FDFHTGNEIACNKGHH-GPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
G +M F +D+ T + V + FSP GE A GS+DG+I +WQ P
Sbjct: 243 CGN-NMGYSFKYDYDTDVDRGLYVSQEPSAVLALSFSPDGEVCAIGSQDGSIILWQMNP 300
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 355 (130.0 bits), Expect = 4.7e-31, P = 4.7e-31
Identities = 90/290 (31%), Positives = 151/290 (52%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V L +SP DG L S S D++ L + TG+ + TFEGH ++WS +
Sbjct: 790 GHSGTVESLAFSP---DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDG 846
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASAS D + K+WD TG++ + + H VR+ +FS D LL + ++ +++++
Sbjct: 847 KELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPA 906
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
+ RS G V++VA+ D L++ ++ V+LW+ +GE++QTLE S V
Sbjct: 907 TGELQQSLEGRS-GWVKSVAF-SPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVR 964
Query: 192 SAEVSQDGRYITTADG-STVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVAGGED 249
S S DG+ + ++ +T+K W++ L +++ I + + P G V+G +D
Sbjct: 965 SVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPD-GKHLVSGSDD 1023
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ +D T + H VH V FSP + AS S D TI++W +
Sbjct: 1024 NTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDS 1073
Score = 330 (121.2 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 88/283 (31%), Positives = 148/283 (52%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
+PDG L S S+ ++ L N TG+ + T EGH +V S + + AS+S+D + K+
Sbjct: 927 SPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKL 986
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG 146
W++ TG++ +F+ H +RA +FS D L++G + ++++DL + D S
Sbjct: 987 WNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSR- 1045
Query: 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA 205
SV VA+ D+ + S+ D ++LWD +GE+ +TLE S V S S DG+ + +
Sbjct: 1046 SVHAVAFSPDDKQLASSSLD-STIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASN 1104
Query: 206 --DGSTVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE 262
DG T+K W+ L ++ ++S + P G + +G D ++ +D TG
Sbjct: 1105 SYDG-TIKLWNPLTGELQQTLTGRSDWVDSVAFSPD-GKQLASGYYDSTIKLWDSATGEL 1162
Query: 263 IACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTND 305
+ +GH + V FSP G+ ASGS D T ++W P T +
Sbjct: 1163 LQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWD--PATGE 1203
Score = 329 (120.9 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 84/287 (29%), Positives = 149/287 (51%)
Query: 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL 74
H PV + +SP DG L+S S D + + + TG+ + T +GH G V S +
Sbjct: 749 HLGPVESVVFSP---DGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGK 805
Query: 75 RAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR 133
AS S D + +WD+ TG++L +FE H H + + +F+ D L + + ++I+DL
Sbjct: 806 LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLAT 865
Query: 134 PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTS 192
+ + +D SVR+VA+ + + S+ D +++W+ +GE+ Q+LE +S V S
Sbjct: 866 GELQ-QTLDSHSQSVRSVAFSPDGKLLASSSLD-STIKVWNPATGELQQSLEGRSGWVKS 923
Query: 193 AEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPC-TIESASLEPKYGNKFVAGGEDM 250
S DG+ + + ++ +TVK W+ L+++ ++ S + P G + + D
Sbjct: 924 VAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPD-GKQLASSSSDT 982
Query: 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
++ ++ TG KGH + V FSP G+ SGS+D TI++W
Sbjct: 983 TIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLW 1029
Score = 317 (116.6 bits), Expect = 5.3e-27, P = 5.3e-27
Identities = 94/316 (29%), Positives = 152/316 (48%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS+ V + +SP DG L S+S D++ L N TG+ TF+GH + + +
Sbjct: 958 GHSQSVRSVAFSP---DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
S S D + K+WD T ++ S E H V A +FS D L + ++ ++++D
Sbjct: 1015 KHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSA 1074
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
+ R ++ VR+V + + + S D G ++LW+ +GE+ QTL +S V
Sbjct: 1075 TGELQ-RTLEGHSQGVRSVTFSPDGKLLASNSYD-GTIKLWNPLTGELQQTLTGRSDWVD 1132
Query: 192 SAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGED 249
S S DG+ + + ST+K WD+ L+++ I+S P G +G D
Sbjct: 1133 SVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPD-GKLLASGSYD 1191
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTET 309
+ +D TG + +GH V V FSP G+ AS S TI++W PVT + +T
Sbjct: 1192 QTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD--PVTGELLQT 1249
Query: 310 LT-ANGTIGKVKVTAD 324
L + + G V + D
Sbjct: 1250 LNDPDESAGSVAFSPD 1265
Score = 288 (106.4 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 74/248 (29%), Positives = 126/248 (50%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDT 114
T E H G V S + + S S D + K+WD TG++L + + H V + +FS D
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
LL +G + + ++D + + + P S+ +VA+ D L++ +D +++WD
Sbjct: 805 KLLASGSYDNTIDLWDSATGELL-QTFEGHPHSIWSVAFA-PDGKELASASDDSTIKIWD 862
Query: 175 VRSGEIVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYN-MPCTIE 231
+ +GE+ QTL++ S V S S DG+ + ++ ST+K W+ L +S ++
Sbjct: 863 LATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVK 922
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
S + P G K +G E V+ ++ TG + +GH V V FSP G+ AS S D
Sbjct: 923 SVAFSPD-GKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSD 981
Query: 292 GTIRIWQT 299
TI++W +
Sbjct: 982 TTIKLWNS 989
Score = 194 (73.4 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 60/203 (29%), Positives = 97/203 (47%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS+ V + +SP DG L S S D + L N TG+ T G V S +
Sbjct: 1084 GHSQGVRSVTFSP---DGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDG 1140
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ AS D + K+WD+ TG++L + E H +++ FS D LL +G ++ +++D
Sbjct: 1141 KQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPA 1200
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVT 191
+ S V +VA+ D +L++ + ++LWD +GE++QTL +
Sbjct: 1201 TGELLQIFEGHSKW-VESVAF-SPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAG 1258
Query: 192 SAEVSQDGRYITTADGSTVKFWD 214
S S DG + + D K WD
Sbjct: 1259 SVAFSPDGNRLASVDIFDTKIWD 1281
Score = 179 (68.1 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 51/164 (31%), Positives = 81/164 (49%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
+PDG L S DS+ L + TG+ + T EGH + S + AS S D +AK+
Sbjct: 1137 SPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKL 1196
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP--REVDRS 144
WD TG++L FE H V + +FS D LL + + ++++D + + D S
Sbjct: 1197 WDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDES 1256
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
GSV D L++ D+ ++WD +GE++Q L+ S
Sbjct: 1257 AGSVA----FSPDGNRLAS-VDIFDTKIWDPATGELLQALKGHS 1295
Score = 153 (58.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 48/163 (29%), Positives = 75/163 (46%)
Query: 182 QTLETK-SPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPC-TIESASLEPK 238
QTLE PV S S DG+ + + TVK WD L+++ + T+ES + P
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 239 YGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
G +G D + +D TG + +GH + V F+P G+ AS S+D TI+IW
Sbjct: 804 -GKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIW- 861
Query: 299 TGPVTNDDTETLTANGTIGKVKVTADEVSRKIEGFHIADEGKM 341
D T G+++ T D S+ + + +GK+
Sbjct: 862 -------DLAT-------GELQQTLDSHSQSVRSVAFSPDGKL 890
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 299 (110.3 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 87/320 (27%), Positives = 150/320 (46%)
Query: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL 69
LV H+ V +++ + DG + S D + + ETG+ + + H+ V C
Sbjct: 611 LVVRPHTDAV---YHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF 667
Query: 70 DTNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDT-HLLL-TGGMEKIL 126
+ A+ S D K+W+++TG+++ + EH V C F+ ++ HLLL TG + L
Sbjct: 668 SADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFL 727
Query: 127 RIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET 186
+++DLN+ + + SV + DQ +L++C+ G ++LWDV+S +++
Sbjct: 728 KLWDLNQEECRNTMFGHT-NSVSHCRFSPDDQ-VLASCSADGTLKLWDVKSANERKSINV 785
Query: 187 KS-------PVTSAEV-------SQDGRYITTADGSTVKFWDANHFGLVKSYNMP--CTI 230
K P EV S DG I A + V +D + GL+ +M +
Sbjct: 786 KQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHHSAV 845
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
+ P + + V V + +G ++A +GH VHCV FSP G S+ + S+
Sbjct: 846 QYCDFSP-HNHLAVVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSD 904
Query: 291 DGTIRIWQTGPVTNDDTETL 310
D TIR+W+T V + L
Sbjct: 905 DQTIRLWETKKVCKNSATVL 924
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTN 72
+GH V + + T DG LIS+S DS+ + N ++ D + H+ V L N
Sbjct: 1002 NGHKTTVRHIQF---TADGKTLISSSDDSAVQIWNWQSEDPF-FLQAHQETVKDFRLLKN 1057
Query: 73 ALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
+ R S S D + KVW+ +T + F H+ V +C S D + +K +I+
Sbjct: 1058 S-RLLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWSF 1116
Query: 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVT 191
+P E+ G VR ++ + T+L+T D G +R+W+V +GE+ L +P++
Sbjct: 1117 ELL-SPLHELRGHKGCVRCSSF-SVNNTLLATGDDNGEIRIWNVSNGEL---LHLCAPIS 1171
Query: 192 SAE-VSQDGRYIT 203
E + G ++T
Sbjct: 1172 VEEGAATHGGWVT 1184
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 56/184 (30%), Positives = 84/184 (45%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
L+S S D + + N T F H+ V SC + ++A + +S SAD +AK+W
Sbjct: 1060 LLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFELL 1119
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD----APPREVDRSPGSV 148
LH HK VR SFS + LL TG +RI++++ + P V+ G+
Sbjct: 1120 SPLHELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEE--GAA 1177
Query: 149 RTVAWLHSDQTILSTCTDM----GG-VRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI 202
W+ +D S T M GG ++ W+V +GE QT T + VS D +
Sbjct: 1178 THGGWV-TD-LCFSPDTKMLVSAGGYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTY 1235
Query: 203 TTAD 206
T D
Sbjct: 1236 VTVD 1239
Score = 134 (52.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 69/296 (23%), Positives = 123/296 (41%)
Query: 45 LRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKH 103
L NG TG E V CCL + A D + ++ + L + S HK
Sbjct: 950 LINGNTGQIDYLTEAQ---VSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQSRNGHKT 1006
Query: 104 IVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163
VR F+ D L++ + ++I++ D P + +V+ L + + +LS
Sbjct: 1007 TVRHIQFTADGKTLISSSDDSAVQIWNWQSED--PFFLQAHQETVKDFRLLKNSR-LLSW 1063
Query: 164 CTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLV 221
D G V++W++ + I + + V S ++S D ++ +T+ T K W +
Sbjct: 1064 SFD-GTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFELLSPL 1122
Query: 222 KSY--NMPCTIESASLEPKYGNKFVAGGEDMW-VRFFDFHTGN------EIACNKG---H 269
+ C + +S N +A G+D +R ++ G I+ +G H
Sbjct: 1123 HELRGHKGC-VRCSSFS--VNNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATH 1179
Query: 270 HGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANGT-IGKVKVTAD 324
G V + FSP + S G ++ W VT + ++T NGT + K+ V+ D
Sbjct: 1180 GGWVTDLCFSPDTKMLVSAG--GYLKWWNV--VTGESSQTFYTNGTNLKKIHVSPD 1231
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 62/288 (21%), Positives = 116/288 (40%)
Query: 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDT 71
C GH V + +SP DG +++S D + +R ET
Sbjct: 880 CRGHLSWVHCVMFSP---DGSSFLTSSDDQT--IRLWETKKVCKNSATVLKQEIDVVFQE 934
Query: 72 NALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
N + + ++ + TG + + E + V C S L GG + ++I +L
Sbjct: 935 NEVTVLAVDNIRRLQLINGNTGQIDYLTEAQ--VSCCCLSPHLQYLAFGGEDGAIQILEL 992
Query: 132 -NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
N R ++ +VR + + +T++S+ D V++W+ +S + + V
Sbjct: 993 LNNRIFQSRNGHKT--TVRHIQFTADGKTLISSSDD-SAVQIWNWQSEDPFFLQAHQETV 1049
Query: 191 TSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGED 249
+ ++ R ++ + TVK W+ + K + T+ S + KF + D
Sbjct: 1050 KDFRLLKNSRLLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSD-ATKFSSTSAD 1108
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ + F + + +GH G V C FS A+G ++G IRIW
Sbjct: 1109 KTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIW 1156
>TAIR|locus:2062994 [details] [associations]
symbol:AT2G46290 "AT2G46290" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009506 EMBL:CP002685 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003743 GO:GO:0080008
KO:K03246 OMA:ATVAGWS IPI:IPI00519717 RefSeq:NP_182152.2
UniGene:At.36529 ProteinModelPortal:F4II66 SMR:F4II66 PRIDE:F4II66
EnsemblPlants:AT2G46290.1 GeneID:819237 KEGG:ath:AT2G46290
Uniprot:F4II66
Length = 355
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 71/258 (27%), Positives = 124/258 (48%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH RP+ L Y+ +G L S +KD +P + + G+ +GT+ GH GAVW C
Sbjct: 30 PILMKGHERPLTFLRYNR---NGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCD 86
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHL--LLTGGMEKIL 126
+ ++ R + SAD +AK+WD +G L +F+ R+ FS HL + T
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTS 146
Query: 127 RIFDLNRPDAPPRE-------VDRSPGSVRTV---AWLHSDQTILSTCTDMGGVRLWDVR 176
+ R P + V +SP + + W +QTI+S D +R+WD
Sbjct: 147 SAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGED-AAIRIWDAE 205
Query: 177 SGEIVQTLET----KSPVTS-AEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIE 231
+G++++ + K +TS + + D ++T + T K WD L+K+Y +
Sbjct: 206 TGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVPVN 265
Query: 232 SASLEPKYGNKFVAGGED 249
+ ++ P + + GG+D
Sbjct: 266 AVAMSPLLNHVVLGGGQD 283
Score = 166 (63.5 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 36/124 (29%), Positives = 61/124 (49%)
Query: 187 KSPVTS-AEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA 245
K +TS + + D ++T + T K WD L+K+Y + + ++ P + +
Sbjct: 220 KEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVPVNAVAMSPLLNHVVLG 279
Query: 246 GGED-------------MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
GG+D +F+D EI KGH GP++ + FSP G+S++SG EDG
Sbjct: 280 GGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGKSFSSGGEDG 339
Query: 293 TIRI 296
+R+
Sbjct: 340 YVRL 343
>FB|FBgn0015834 [details] [associations]
symbol:Trip1 "Trip1" species:7227 "Drosophila melanogaster"
[GO:0003743 "translation initiation factor activity"
evidence=ISS;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS;NAS] [GO:0005829 "cytosol" evidence=NAS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
KO:K03246 HAMAP:MF_03008 GeneTree:ENSGT00630000089849 OMA:ATVAGWS
EMBL:U90930 EMBL:AY118527 RefSeq:NP_523478.1 UniGene:Dm.2654
ProteinModelPortal:O02195 SMR:O02195 DIP:DIP-18772N IntAct:O02195
MINT:MINT-1576694 STRING:O02195 PaxDb:O02195 PRIDE:O02195
EnsemblMetazoa:FBtr0079053 GeneID:33710 KEGG:dme:Dmel_CG8882
UCSC:CG8882-RA CTD:33710 FlyBase:FBgn0015834 InParanoid:O02195
OrthoDB:EOG463XTJ PhylomeDB:O02195 ChiTaRS:PSMC5 GenomeRNAi:33710
NextBio:784905 Bgee:O02195 GermOnline:CG8882 Uniprot:O02195
Length = 326
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 70/255 (27%), Positives = 126/255 (49%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL+ GH R + + Y+ +G L S SKD P + G+ +GT++GH+GAVW
Sbjct: 3 PLMLQGHERSITQIKYNR---EGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRAC--SFSEDTHLLLTG---GME 123
+D + + + + D +AK+WD G V+ S K VR SFS + T G
Sbjct: 60 VDWESRKLITGAGDMTAKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQS 119
Query: 124 KILRIFDLNRPDA------PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
L + D+ D+ P + + + ++ W D+TI+ T D G + +WD+R
Sbjct: 120 CELFLIDVRNADSSLSEQEPTLRIPMTESKITSMLWGPLDETII-TGHDNGNIAIWDIRK 178
Query: 178 GE-IVQT-LETKSPVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSYNMPCTIESAS 234
G+ +V + + + + ++S+DG ++T + +T K +D+ +K+Y + SA+
Sbjct: 179 GQKVVDSGTDHSAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAA 238
Query: 235 LEPKYGNKFVAGGED 249
+ P + + GG+D
Sbjct: 239 ISPIMDHVVLGGGQD 253
Score = 217 (81.4 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 54/179 (30%), Positives = 93/179 (51%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE-IVQT-LETKSPVTSAE 194
P + + + ++ W D+TI+ T D G + +WD+R G+ +V + + + + +
Sbjct: 139 PTLRIPMTESKITSMLWGPLDETII-TGHDNGNIAIWDIRKGQKVVDSGTDHSAGINDMQ 197
Query: 195 VSQDGR-YITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGED-MWV 252
+S+DG ++T + +T K +D+ +K+Y + SA++ P + + GG+D M V
Sbjct: 198 LSKDGTMFVTASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIMDHVVLGGGQDAMEV 257
Query: 253 ------------RFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
RFF E A KGH GP++ + F P G+SYASG EDG +R+ QT
Sbjct: 258 TTTSTKAGKFDSRFFHLIYEEEFARLKGHFGPINSLAFHPDGKSYASGGEDGFVRV-QT 315
>TAIR|locus:2063009 [details] [associations]
symbol:TRIP-1 "AT2G46280" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0046686 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0009651 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003743 EMBL:AC005397
GO:GO:0080008 EMBL:U36765 EMBL:AF285835 EMBL:AF370485 EMBL:AY064633
IPI:IPI00547942 PIR:H84900 PIR:S60256 RefSeq:NP_182151.1
RefSeq:NP_850450.1 UniGene:At.21646 ProteinModelPortal:Q38884
SMR:Q38884 IntAct:Q38884 STRING:Q38884 PaxDb:Q38884 PRIDE:Q38884
EnsemblPlants:AT2G46280.1 EnsemblPlants:AT2G46280.2 GeneID:819236
KEGG:ath:AT2G46280 GeneFarm:2828 TAIR:At2g46280
HOGENOM:HOG000231322 InParanoid:Q38884 KO:K03246 OMA:GKKRINR
PhylomeDB:Q38884 ProtClustDB:CLSN2683457 Genevestigator:Q38884
HAMAP:MF_03008 Uniprot:Q38884
Length = 328
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 74/258 (28%), Positives = 127/258 (49%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH RP+ L Y+ +G L S +KD +P L + G+ +GT+ GH GAVW C
Sbjct: 3 PILMKGHERPLTFLRYNR---EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHL-LLTGG--MEK- 124
+ ++ R + SAD +AK+WD +G L +F+ R+ F+ L ++T +++
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRT 119
Query: 125 ----ILRIF-DLNRPDAPPREVDRSPGSVRTV---AWLHSDQTILSTCTDMGGVRLWDVR 176
+ RI D DA V P + + W +QTI+S D +R+WD
Sbjct: 120 AAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKV-IRIWDAE 178
Query: 177 SGEIVQTLET----KSPVTS-AEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIE 231
+G++++ + K +TS + + D ++T + T K WD L+K+Y +
Sbjct: 179 TGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVN 238
Query: 232 SASLEPKYGNKFVAGGED 249
+ SL P + + GG+D
Sbjct: 239 AVSLSPLLNHVVLGGGQD 256
Score = 162 (62.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 187 KSPVTS-AEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA 245
K +TS + + D ++T + T K WD L+K+Y + + SL P + +
Sbjct: 193 KKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVLG 252
Query: 246 GGED-------------MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
GG+D +F+D EI KGH GP++ + F+P G+S++SG EDG
Sbjct: 253 GGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDG 312
Query: 293 TIRI 296
+R+
Sbjct: 313 YVRL 316
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 288 (106.4 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 88/316 (27%), Positives = 150/316 (47%)
Query: 17 RPVVD-LFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALR 75
RP D ++++ + DG + S D + + ETG+ + + H+ V C ++
Sbjct: 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSY 671
Query: 76 AASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFS-EDTHLLL-TGGMEKILRIFDLN 132
A+ SAD K+WD+ TG ++H++ EH V C F+ + HLLL TG + L+++DLN
Sbjct: 672 IATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLN 731
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK----- 187
+ + + SV + D+ +L++C+ G +RLWDVRS +++ K
Sbjct: 732 QKECRNTMFGHT-NSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLS 789
Query: 188 --SPVTSAEV-------SQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE-- 236
P EV S DG I A + V +D + GL+ + T ++++
Sbjct: 790 SEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIH---TGHHSTIQYC 846
Query: 237 --PKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
Y + V V ++ + ++A +GH VH V FSP G S+ + S+D TI
Sbjct: 847 DFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTI 906
Query: 295 RIWQTGPVTNDDTETL 310
R+W+T V + L
Sbjct: 907 RVWETKKVCKNSAIVL 922
Score = 179 (68.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 59/194 (30%), Positives = 99/194 (51%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + V + + T DG LIS+S+DS + N +TGD++ + H+ V L ++
Sbjct: 1001 GHKKAVRHIQF---TADGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVKDFRLLQDS 1056
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRI--FD 130
R S S D + KVW+ +TG + F H+ V +C+ S D + +K +I FD
Sbjct: 1057 -RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFD 1115
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
L +P E+ G VR A+ D +L+T D G +R+W+V G++ L + +P+
Sbjct: 1116 LL---SPLHELKGHNGCVRCSAF-SLDGILLATGDDNGEIRIWNVSDGQL---LHSCAPI 1168
Query: 191 TSAE-VSQDGRYIT 203
+ E + G ++T
Sbjct: 1169 SVEEGTATHGGWVT 1182
Score = 153 (58.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 56/184 (30%), Positives = 85/184 (46%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
L+S S D + + N TG F H+G V SC + ++A + +S SAD +AK+W
Sbjct: 1058 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLL 1117
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD----APPREVDRSP--- 145
LH + H VR +FS D LL TG +RI++++ P V+
Sbjct: 1118 SPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATH 1177
Query: 146 -GSVRTVAWLHSDQTILSTCTDMGG-VRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI 202
G V V + +T++S GG ++ W+V +G+ QT T + VS D R
Sbjct: 1178 GGWVTDVCFSPDSKTLVSA----GGYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTY 1233
Query: 203 TTAD 206
T D
Sbjct: 1234 VTVD 1237
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 65/274 (23%), Positives = 117/274 (42%)
Query: 67 CCLDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKI 125
CCL + A D + K+ + V S HK VR F+ D L++ + +
Sbjct: 967 CCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSV 1026
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE 185
+++++ D + + +V+ L D +LS D G V++W+V +G I +
Sbjct: 1027 IQVWNWQTGDYVFLQAHQE--TVKDFRLLQ-DSRLLSWSFD-GTVKVWNVITGRIERDFT 1082
Query: 186 T-KSPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLV---KSYNMPCTIESASLEPKYG 240
+ V S +S D ++ +T+ T K W + + K +N + SL+ G
Sbjct: 1083 CHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLD---G 1139
Query: 241 NKFVAGGEDMWVRFFD------FHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSED 291
G ++ +R ++ H+ I+ +G H G V V FSP ++ S
Sbjct: 1140 ILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG-- 1197
Query: 292 GTIRIWQTGPVTNDDTETLTANGT-IGKVKVTAD 324
G ++ W T D ++T NGT + K+ V+ D
Sbjct: 1198 GYLKWWNVA--TGDSSQTFYTNGTNLKKIHVSPD 1229
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 105 VRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC 164
V C S + G + ++I +L V +VR + + +T++S+
Sbjct: 964 VSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKK-AVRHIQFTADGKTLISSS 1022
Query: 165 TDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSY 224
D +++W+ ++G+ V + V + QD R ++ + TVK W+ + + +
Sbjct: 1023 ED-SVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDF 1081
Query: 225 NM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE 283
T+ S ++ KF + D + + F + + KGH+G V C FS G
Sbjct: 1082 TCHQGTVLSCAISSD-ATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGI 1140
Query: 284 SYASGSEDGTIRIW 297
A+G ++G IRIW
Sbjct: 1141 LLATGDDNGEIRIW 1154
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 286 (105.7 bits), Expect = 9.4e-24, P = 9.4e-24
Identities = 86/320 (26%), Positives = 150/320 (46%)
Query: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL 69
LV H+ V +++ + DG + S D + + ETG+ + + H+ V C
Sbjct: 610 LVVRPHTDAV---YHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF 666
Query: 70 DTNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLL--TGGMEKIL 126
T+ A+ S D K+W+++TG ++H + EH V C F+ ++H LL T + L
Sbjct: 667 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFL 726
Query: 127 RIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET 186
+++DLN+ + + SV + D+ +L++C+ G ++LWDV+S +++
Sbjct: 727 KLWDLNQKECRNTMFGHT-NSVNHCRFSPDDK-LLASCSADGTLKLWDVKSANERKSINV 784
Query: 187 KS-------PVTSAEV-------SQDGRYITTADGSTVKFWDANHFGLVKSYNMP--CTI 230
K P EV S DG I A + + +D + GL+ + TI
Sbjct: 785 KQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTI 844
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
+ P+ VA + V ++ + ++A +GH VHCV FSP G S+ + S+
Sbjct: 845 QYCDFSPQNHLAVVALSQ-CCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSD 903
Query: 291 DGTIRIWQTGPVTNDDTETL 310
D TIR+W+T V + L
Sbjct: 904 DQTIRLWETKKVCKNSAIVL 923
Score = 165 (63.1 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 54/192 (28%), Positives = 93/192 (48%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + V + + T DG LIS+S DSS + N ++ +++ + H+ V L N+
Sbjct: 1002 GHKKTVRHIQF---TDDGKTLISSSDDSSIQVWNWQSEEYV-FLQAHQETVKDFKLLKNS 1057
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ S S D + K+W +TG + F H+ V +C S D + +K +I+
Sbjct: 1058 -KLLSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFE 1116
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
+P E+ G VR + D T+L+T D G +R+W+V +GE+ L +P+
Sbjct: 1117 LL-SPLHELRGHKGCVRCSVF-SVDSTLLATGDDNGEIRIWNVSNGEL---LHLCAPILV 1171
Query: 193 AE-VSQDGRYIT 203
E + G ++T
Sbjct: 1172 EEGAATHGGWVT 1183
Score = 139 (54.0 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 46/207 (22%), Positives = 88/207 (42%)
Query: 92 TGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTV 151
TG + + E + V C S + GG + + I +L + +VR +
Sbjct: 954 TGQIDYLIEAQ--VSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKK-TVRHI 1010
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVK 211
+ +T++S+ D +++W+ +S E V + V ++ ++ + ++ + TVK
Sbjct: 1011 QFTDDGKTLISSSDD-SSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSFDGTVK 1069
Query: 212 FWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
W + K + T+ S + P KF + D + + F + + +GH
Sbjct: 1070 IWSIITGRIEKDFVCHQDTVLSCDISPD-ATKFSSTSADKTAKIWSFELLSPLHELRGHK 1128
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIW 297
G V C FS A+G ++G IRIW
Sbjct: 1129 GCVRCSVFSVDSTLLATGDDNGEIRIW 1155
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 54/182 (29%), Positives = 81/182 (44%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
L+S S D + + + TG F H+ V SC + +A + +S SAD +AK+W
Sbjct: 1059 LLSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELL 1118
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD-----AP--PREVDRSP 145
LH HK VR FS D+ LL TG +RI++++ + AP E +
Sbjct: 1119 SPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATH 1178
Query: 146 GSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITT 204
G T D +L + G ++ W+V +GE QT T + VS D + T
Sbjct: 1179 GGWVTDLCFSPDSKMLVSAG--GYLKWWNVVTGESSQTFYTNGTCLKKIHVSSDFKTYVT 1236
Query: 205 AD 206
D
Sbjct: 1237 VD 1238
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 286 (105.7 bits), Expect = 9.5e-24, P = 9.5e-24
Identities = 86/320 (26%), Positives = 150/320 (46%)
Query: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL 69
LV H+ V +++ + DG + S D + + ETG+ + + H+ V C
Sbjct: 617 LVVRPHTDAV---YHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAF 673
Query: 70 DTNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLL--TGGMEKIL 126
T+ A+ S D K+W+++TG ++H + EH V C F+ ++H LL T + L
Sbjct: 674 STDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFL 733
Query: 127 RIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET 186
+++DLN+ + + SV + D+ +L++C+ G ++LWDV+S +++
Sbjct: 734 KLWDLNQKECRNTMFGHT-NSVNHCRFSPDDK-LLASCSADGTLKLWDVKSANERKSINV 791
Query: 187 KS-------PVTSAEV-------SQDGRYITTADGSTVKFWDANHFGLVKSYNMP--CTI 230
K P EV S DG I A + + +D + GL+ + TI
Sbjct: 792 KQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTI 851
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
+ P+ VA + V ++ + ++A +GH VHCV FSP G S+ + S+
Sbjct: 852 QYCDFSPQNHLAVVALSQ-CCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSD 910
Query: 291 DGTIRIWQTGPVTNDDTETL 310
D TIR+W+T V + L
Sbjct: 911 DQTIRLWETKKVCKNSAIVL 930
Score = 156 (60.0 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + V + + T DG LIS+S DSS + N ++ +++ + H+ V L N+
Sbjct: 1009 GHKKTVRHIQF---TDDGKTLISSSDDSSIQVWNWQSEEYV-FLQAHQETVKDFKLLKNS 1064
Query: 74 LRAASASADFSAK-VWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
+ S S D + K +W +TG + F H+ V +C S D + +K +I+
Sbjct: 1065 -KLLSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSF 1123
Query: 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVT 191
+P E+ G VR + D T+L+T D G +R+W+V +GE+ L +P+
Sbjct: 1124 ELL-SPLHELRGHKGCVRCSVF-SVDSTLLATGDDNGEIRIWNVSNGEL---LHLCAPIL 1178
Query: 192 SAE-VSQDGRYIT 203
E + G ++T
Sbjct: 1179 VEEGAATHGGWVT 1191
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/208 (22%), Positives = 89/208 (42%)
Query: 92 TGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTV 151
TG + + E + V C S + GG + + I +L + +VR +
Sbjct: 961 TGQIDYLIEAQ--VSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKK-TVRHI 1017
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-DGSTV 210
+ +T++S+ D +++W+ +S E V + V ++ ++ + ++ + DG+
Sbjct: 1018 QFTDDGKTLISSSDD-SSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSFDGTVK 1076
Query: 211 KFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
K W + K + T+ S + P KF + D + + F + + +GH
Sbjct: 1077 KIWSIITGRIEKDFVCHQDTVLSCDISPD-ATKFSSTSADKTAKIWSFELLSPLHELRGH 1135
Query: 270 HGPVHCVRFSPGGESYASGSEDGTIRIW 297
G V C FS A+G ++G IRIW
Sbjct: 1136 KGCVRCSVFSVDSTLLATGDDNGEIRIW 1163
Score = 130 (50.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 48/159 (30%), Positives = 71/159 (44%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F H+ V SC + +A + +S SAD +AK+W LH HK VR FS D+
Sbjct: 1090 FVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDST 1149
Query: 116 LLLTGGMEKILRIFDLNRPD-----AP--PREVDRSPGSVRTVAWLHSDQTILSTCTDMG 168
LL TG +RI++++ + AP E + G T D +L + G
Sbjct: 1150 LLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG--G 1207
Query: 169 GVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTAD 206
++ W+V +GE QT T + VS D + T D
Sbjct: 1208 YLKWWNVVTGESSQTFYTNGTCLKKIHVSSDFKTYVTVD 1246
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 280 (103.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 87/316 (27%), Positives = 147/316 (46%)
Query: 17 RPVVD-LFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALR 75
RP D ++++ + DG + S D + + ETG+ + + H+ V C ++
Sbjct: 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSY 671
Query: 76 AASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFS-EDTHLLL-TGGMEKILRIFDLN 132
A+ S D K+WD+ TG ++H++E H V C F+ + HLLL TG + L+++DLN
Sbjct: 672 IATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLN 731
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK----- 187
+ + + SV T D +L++C+ G ++LWDVRS +++ K
Sbjct: 732 QKECRNTMFGHT-NSV-THCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKRFFLS 789
Query: 188 --SPVTSAEV-------SQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE-- 236
P EV S DG I A + V D + GL+ + T ++++
Sbjct: 790 SEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIH---TGHHSTIQYC 846
Query: 237 --PKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
Y + V V ++ + ++A +GH VH V FSP G S+ + S+D TI
Sbjct: 847 DFSPYDHLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTI 906
Query: 295 RIWQTGPVTNDDTETL 310
R+W+T V + L
Sbjct: 907 RVWETRKVCKNSAIVL 922
Score = 150 (57.9 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 54/182 (29%), Positives = 82/182 (45%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
L+S S D + + N TG F H+G V SC + ++A + +S SAD +AK+W
Sbjct: 1058 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELP 1117
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD----APPREVDRSP--- 145
LH + H VR +FS D LL TG +RI++++ P ++
Sbjct: 1118 SPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATH 1177
Query: 146 GSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITT 204
G T D+ +L + G ++ W+V +GE QT T + VS D R T
Sbjct: 1178 GGWVTDVCFSPDRKMLVSAG--GYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFRTYVT 1235
Query: 205 AD 206
D
Sbjct: 1236 VD 1237
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 63/274 (22%), Positives = 116/274 (42%)
Query: 67 CCLDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKI 125
CCL + A + + K+ + V S HK VR F+ D L++ + +
Sbjct: 967 CCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSV 1026
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE 185
+++++ + + + +V+ L D +LS D G V++W+V +G I +
Sbjct: 1027 IQVWNWQTEEYVFLQAHQE--TVKDFRLLR-DSRLLSWSFD-GTVKVWNVITGRIERDFT 1082
Query: 186 T-KSPVTSAEVSQDG-RYITTADGSTVKFWD---ANHFGLVKSYNMPCTIESASLEPKYG 240
+ V S +S D ++ +T+ T K W + +K +N + SL+ G
Sbjct: 1083 CHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLD---G 1139
Query: 241 NKFVAGGEDMWVRFFDFHTGN------EIACNKG---HHGPVHCVRFSPGGESYASGSED 291
G ++ +R ++ G I+ +G H G V V FSP + S
Sbjct: 1140 ILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSAG-- 1197
Query: 292 GTIRIWQTGPVTNDDTETLTANGT-IGKVKVTAD 324
G ++ W VT + ++T NGT + K+ V+ D
Sbjct: 1198 GYLKWWNV--VTGESSQTFYTNGTNLKKIHVSPD 1229
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 61/287 (21%), Positives = 114/287 (39%)
Query: 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDT 71
C GH V + +SP DG ++AS D + +R ET
Sbjct: 878 CRGHLSWVHGVMFSP---DGSSFLTASDDQT--IRVWETRKVCKNSAIVLKQEIDVVFQE 932
Query: 72 NALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
N + + ++ TG + + E + V C S + G E ++I +L
Sbjct: 933 NEMMVLAVDNIRGLQLIAGKTGQIDYLPEAQ--VSCCCLSPHLEYVAFGDEEGAIKIIEL 990
Query: 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVT 191
+ +VR + + +T++S+ D +++W+ ++ E V + V
Sbjct: 991 PNNRVFSSGIGHKK-AVRHIQFTADGKTLISSSED-SVIQVWNWQTEEYVFLQAHQETVK 1048
Query: 192 SAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDM 250
+ +D R ++ + TVK W+ + + + T+ S ++ KF + D
Sbjct: 1049 DFRLLRDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSD-ATKFSSTSADK 1107
Query: 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ + F + + KGH+ V C FS G A+G ++G IRIW
Sbjct: 1108 TAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIW 1154
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 278 (102.9 bits), Expect = 6.7e-23, P = 6.7e-23
Identities = 84/320 (26%), Positives = 154/320 (48%)
Query: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL 69
LV H+ V +++ + DG + S D + + ETG+ + + H+ V C
Sbjct: 609 LVVRPHTDAV---YHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAF 665
Query: 70 DTNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDT-HLLL-TGGMEKIL 126
+ A+ S D K+W+++TG+++ S+ EH V C F+ ++ HLLL TG + L
Sbjct: 666 SADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFL 725
Query: 127 RIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET 186
+++DLN+ + + SV + D+ +L++C+ G ++LWDV+S +++
Sbjct: 726 KLWDLNQKECRNTMFGHT-NSVSHCRFSPDDK-LLASCSADGTLKLWDVKSANERKSINV 783
Query: 187 KSPVTSAEVSQDGRYIT------TADGST--------VKFWDANHFGLVKSYNMP--CTI 230
K ++E SQ+ + +ADG++ V ++ + GL+ + TI
Sbjct: 784 KQFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHTGHHSTI 843
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
+ P VA + V ++ + ++A +GH VHC FSP G S+ + S+
Sbjct: 844 QYCDFSPSNHLAVVALSQ-YCVELWNMDSCLKVADCRGHLSWVHCAMFSPDGSSFLTSSD 902
Query: 291 DGTIRIWQTGPVTNDDTETL 310
D TIR+W+T V + L
Sbjct: 903 DETIRLWETKKVCKNSAIVL 922
Score = 177 (67.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 62/226 (27%), Positives = 111/226 (49%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
T DG +IS+S DS+ + N ++ + + + + H+ V L N+ R S S D + KV
Sbjct: 1012 TTDGKNVISSSDDSAIQVWNWQSEETV-SLQAHQETVKDFRLLKNS-RLLSWSFDGTVKV 1069
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRI--FDLNRPDAPPREVDRS 144
W+ +TG + F H+ V +C S D + +K +I FDL +P E+
Sbjct: 1070 WNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLL---SPLHELRGH 1126
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-----LETKSP-----VTSAE 194
G VR A+ D T+L+T D G +R+W+V +GE++ + +E + VT
Sbjct: 1127 KGCVRCSAF-SVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLR 1185
Query: 195 VSQDGRYITTADGSTVKFWDANHFGLVKS-YNMPCTIESASLEPKY 239
S DG+ + +A G +K+W+ + +++ Y ++ + P +
Sbjct: 1186 FSPDGKMLVSA-GGYLKWWNVDSGKSIQTFYTNGTNLKKIHVSPDF 1230
Score = 142 (55.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 63/288 (21%), Positives = 114/288 (39%)
Query: 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDT 71
C GH V +SP DG +++S D + +R ET
Sbjct: 878 CRGHLSWVHCAMFSP---DGSSFLTSSDDET--IRLWETKKVCKNSAIVLNKKIDVVFQE 932
Query: 72 NALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
N + + +V + TG + + E + V C S L G + +++ +L
Sbjct: 933 NEVMVLAVDNIRRLQVINGKTGQIDYLTEAQ--VSCCCLSPHLQYLAFGSDDGAIQVLEL 990
Query: 132 -NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
N R R +VR + + + ++S+ D +++W+ +S E V + V
Sbjct: 991 LNNRLFQSRT--RHKNTVRHIQFTTDGKNVISSSDD-SAIQVWNWQSEETVSLQAHQETV 1047
Query: 191 TSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGED 249
+ ++ R ++ + TVK W+ + K + T+ S + P KF + D
Sbjct: 1048 KDFRLLKNSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPD-ATKFSSTSAD 1106
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ + F + + +GH G V C FS A+G ++G IRIW
Sbjct: 1107 KTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIW 1154
Score = 131 (51.2 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 67/294 (22%), Positives = 126/294 (42%)
Query: 47 NGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIV 105
NG+TG E V CCL + A S D + +V + L + S HK+ V
Sbjct: 950 NGKTGQIDYLTEAQ---VSCCCLSPHLQYLAFGSDDGAIQVLELLNNRLFQSRTRHKNTV 1006
Query: 106 RACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT 165
R F+ D +++ + +++++ + + + +V+ L + + +LS
Sbjct: 1007 RHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSLQAHQE--TVKDFRLLKNSR-LLSWSF 1063
Query: 166 DMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLVKS 223
D G V++W++ +G I + + V S ++S D ++ +T+ T K W + +
Sbjct: 1064 D-GTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHE 1122
Query: 224 Y--NMPCTIESASLEPKYGNKFVAGGEDMW-VRFFDFHTGNEI-ACN----KG----HHG 271
+ C SA + +A G+D +R ++ G + +C +G H G
Sbjct: 1123 LRGHKGCVRCSAF---SVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGG 1179
Query: 272 PVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANGT-IGKVKVTAD 324
V +RFSP G+ S G ++ W + +T NGT + K+ V+ D
Sbjct: 1180 WVTDLRFSPDGKMLVSAG--GYLKWWNVD--SGKSIQTFYTNGTNLKKIHVSPD 1229
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 280 (103.6 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 89/332 (26%), Positives = 149/332 (44%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ V + +S D L SAS D + + + TG +GH +V S ++
Sbjct: 303 GHNEWVKSVVFSH---DSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDS 359
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
AS S D + ++W+ TG + H+FE H+ V A SF+ D+ L + ++I+D
Sbjct: 360 RLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD-T 418
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
R + ++ V +V++ D +L++ +D V++W +G + +TLE + V
Sbjct: 419 RTGSLQNVLEGHDDCVNSVSF-SPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVR 477
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDM 250
S S D R I +A D TVK WD L + + + + +DM
Sbjct: 478 SVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDM 537
Query: 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETL 310
V+ +D TG+ +GH V+ V FSP AS S+DGT++IW T T
Sbjct: 538 TVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAA--TGTVQHTF 595
Query: 311 TANGTIGKVKVTADEVSRKIEGFHIADEGKMK 342
+G + + + S + D+G +K
Sbjct: 596 DGSGRVA-ISLAFSHTSNLLAS--AMDDGTVK 624
Score = 273 (101.2 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 99/341 (29%), Positives = 152/341 (44%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P GH R V + +S D L SAS D + + + T T EGH V S
Sbjct: 256 PAQFKGHDRAVGSVSFSH---DSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVV 312
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILR 127
++ ASAS D + K+WD TG + + H VR+ FS D+ L+ +G ++ +R
Sbjct: 313 FSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVR 372
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187
I++ D SV V++ H D L++ +D G V++WD R+G + LE
Sbjct: 373 IWETTTGLLRHTFEDHED-SVMAVSFAH-DSRRLASASDGGNVKIWDTRTGSLQNVLEGH 430
Query: 188 SP-VTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFV 244
V S S D R + +A D TVK W A L ++ + S + ++ +
Sbjct: 431 DDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFS--HDSRLI 488
Query: 245 AGG-EDMWVRFFDFHTGNEIACN-KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302
A +DM V+ +D T + N + H V V FS AS S+D T++IW T
Sbjct: 489 ASASDDMTVKIWDTATV-PLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTA-- 545
Query: 303 TNDDTETLTANGT-IGKVKVTADEVSRKIEGFHIADEGKMK 342
T TL + + V + D SR + +D+G +K
Sbjct: 546 TGSLENTLEGHDDRVNSVSFSPD--SRLLAS--ASDDGTVK 582
Score = 235 (87.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 79/288 (27%), Positives = 125/288 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ V + +S D + S S D + + TG TFE H+ +V + ++
Sbjct: 345 GHNDSVRSVVFSH---DSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDS 401
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
R ASAS + K+WD TG + + E H V + SFS D+ LL + ++ ++I+
Sbjct: 402 RRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHA- 460
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
+ R ++ VR+V + H + I S DM V++WD + + LE+ V
Sbjct: 461 ATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMT-VKIWDTATVPLQNNLESHDNWVR 519
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVAGGED 249
S S D R + +A D TVK WD L + + S S P + +D
Sbjct: 520 SVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPD-SRLLASASDD 578
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
V+ + TG G + FS AS +DGT++IW
Sbjct: 579 GTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIW 626
Score = 142 (55.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 59/222 (26%), Positives = 98/222 (44%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L SAS D + + + TG T EGH V S ++ ASAS D + K+W
Sbjct: 526 DSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWY 585
Query: 90 ALTGDVLHSFEHK-HIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV 148
A TG V H+F+ + + +FS ++LL + + ++I+D+ R +
Sbjct: 586 AATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSL--RHTFDLDHEI 643
Query: 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRS----GEIVQTLETKSPVTSAEVSQDGRYITT 204
+ + + D+++ S T++G ++L D RS G + +S + G Y +
Sbjct: 644 QRIQF---DKSMSSLITNVGRIQL-DARSKATEGFASSQVLDRSQAQGHHPRRQG-YGLS 698
Query: 205 ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAG 246
D S + + N L Y PC I + S+ PK V G
Sbjct: 699 DDFSWITWNGDNVLWLPPGYR-PC-ISTVSVPPKESGTSVIG 738
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 80/296 (27%), Positives = 141/296 (47%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH++ V + +SP +G +L S+S D + G + T GHK + +++
Sbjct: 70 GHTKAVSAVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
S S D + KVW+ TG L + + H + V C+F+ ++L+++G ++ +RI+D+
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV- 185
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL--ETKSPV 190
R + + V V + I+S+ D G R+WD SG+ ++TL + PV
Sbjct: 186 RTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQCLKTLIDDDNPPV 244
Query: 191 TSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTIESASLEPKYGNKFVA 245
+ + S +G+YI A +T+K WD + +K+Y N I A+ G V+
Sbjct: 245 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI-FANFSVTGGKWIVS 303
Query: 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS--EDGTIRIWQT 299
G ED V ++ + + +GH V C P AS + D TI++W++
Sbjct: 304 GSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359
Score = 221 (82.9 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 78/273 (28%), Positives = 127/273 (46%)
Query: 36 SASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDV 95
SAS SS ++ T + T GH AV + N AS+SAD K+W A G
Sbjct: 49 SASNKSSLSVKPNYTLKF--TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKF 106
Query: 96 LHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWL 154
+ HK + ++S D+ LL++G +K L++++L+ + + + V +
Sbjct: 107 EKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSL-KTLKGHSNYVFCCNFN 165
Query: 155 HSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTA--DGSTVK 211
I+S D VR+WDVR+G+ ++TL S PV++ ++DG I ++ DG +
Sbjct: 166 PQSNLIVSGSFDES-VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCR 223
Query: 212 FWDANHFGLVKSY----NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK 267
WD +K+ N P + S KY +A D ++ +D+ G +
Sbjct: 224 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY---ILAATLDNTLKLWDYSKGKCLKTYT 280
Query: 268 GHHGPVHCV--RFS-PGGESYASGSEDGTIRIW 297
GH +C+ FS GG+ SGSED + IW
Sbjct: 281 GHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIW 313
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 86/311 (27%), Positives = 146/311 (46%)
Query: 3 KKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG 62
K A+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 6 KPNYALKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 62
Query: 63 AV----WSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
+ WS D+N L SAS D + K+WD +G L + + H + V C+F+ ++L+
Sbjct: 63 GISDVAWSS--DSNLL--VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 118
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
++G ++ +RI+D+ + + V V + I+S+ D G R+WD S
Sbjct: 119 VSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTAS 176
Query: 178 GEIVQTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTI 230
G+ ++TL + PV+ + S +G+YI A +T+K WD + +K+Y N I
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 236
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS- 289
A+ G V+G ED V ++ T + +GH V P AS +
Sbjct: 237 -FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 295
Query: 290 -EDGTIRIWQT 299
D TI++W++
Sbjct: 296 ENDKTIKLWKS 306
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 86/311 (27%), Positives = 146/311 (46%)
Query: 3 KKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG 62
K A+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 63 AV----WSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
+ WS D+N L SAS D + K+WD +G L + + H + V C+F+ ++L+
Sbjct: 89 GISDVAWSS--DSNLL--VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
++G ++ +RI+D+ + + V V + I+S+ D G R+WD S
Sbjct: 145 VSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTAS 202
Query: 178 GEIVQTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTI 230
G+ ++TL + PV+ + S +G+YI A +T+K WD + +K+Y N I
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS- 289
A+ G V+G ED V ++ T + +GH V P AS +
Sbjct: 263 -FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 290 -EDGTIRIWQT 299
D TI++W++
Sbjct: 322 ENDKTIKLWKS 332
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 86/311 (27%), Positives = 146/311 (46%)
Query: 3 KKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG 62
K A+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 63 AV----WSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
+ WS D+N L SAS D + K+WD +G L + + H + V C+F+ ++L+
Sbjct: 89 GISDVAWSS--DSNLL--VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
++G ++ +RI+D+ + + V V + I+S+ D G R+WD S
Sbjct: 145 VSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTAS 202
Query: 178 GEIVQTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTI 230
G+ ++TL + PV+ + S +G+YI A +T+K WD + +K+Y N I
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS- 289
A+ G V+G ED V ++ T + +GH V P AS +
Sbjct: 263 -FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 290 -EDGTIRIWQT 299
D TI++W++
Sbjct: 322 ENDKTIKLWKS 332
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 86/311 (27%), Positives = 146/311 (46%)
Query: 3 KKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG 62
K A+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 63 AV----WSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
+ WS D+N L SAS D + K+WD +G L + + H + V C+F+ ++L+
Sbjct: 89 GISDVAWSS--DSNLL--VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
++G ++ +RI+D+ + + V V + I+S+ D G R+WD S
Sbjct: 145 VSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTAS 202
Query: 178 GEIVQTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTI 230
G+ ++TL + PV+ + S +G+YI A +T+K WD + +K+Y N I
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS- 289
A+ G V+G ED V ++ T + +GH V P AS +
Sbjct: 263 -FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 290 -EDGTIRIWQT 299
D TI++W++
Sbjct: 322 ENDKTIKLWKS 332
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 86/311 (27%), Positives = 146/311 (46%)
Query: 3 KKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG 62
K A+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 63 AV----WSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
+ WS D+N L SAS D + K+WD +G L + + H + V C+F+ ++L+
Sbjct: 89 GISDVAWSS--DSNLL--VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
++G ++ +RI+D+ + + V V + I+S+ D G R+WD S
Sbjct: 145 VSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTAS 202
Query: 178 GEIVQTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTI 230
G+ ++TL + PV+ + S +G+YI A +T+K WD + +K+Y N I
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS- 289
A+ G V+G ED V ++ T + +GH V P AS +
Sbjct: 263 -FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 290 -EDGTIRIWQT 299
D TI++W++
Sbjct: 322 ENDKTIKLWKS 332
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 86/311 (27%), Positives = 146/311 (46%)
Query: 3 KKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG 62
K A+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 32 KPNYALKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKL 88
Query: 63 AV----WSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
+ WS D+N L SAS D + K+WD +G L + + H + V C+F+ ++L+
Sbjct: 89 GISDVAWSS--DSNLL--VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
++G ++ +RI+D+ + + V V + I+S+ D G R+WD S
Sbjct: 145 VSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTAS 202
Query: 178 GEIVQTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTI 230
G+ ++TL + PV+ + S +G+YI A +T+K WD + +K+Y N I
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS- 289
A+ G V+G ED V ++ T + +GH V P AS +
Sbjct: 263 -FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAAL 321
Query: 290 -EDGTIRIWQT 299
D TI++W++
Sbjct: 322 ENDKTIKLWKS 332
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 77/298 (25%), Positives = 143/298 (47%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + + + +SP DG +L SAS D + + G + T EGHK + ++
Sbjct: 44 GHLKSISSVKFSP---DGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS D + K+WD +G ++ + + HK V SF+ ++L+++G ++ +RI+D+N
Sbjct: 101 KLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVN 160
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS--PV 190
+ + + V V + ++S D G VR+WD +G+++ T+ T+ V
Sbjct: 161 TGECT-KMISAHSDPVTGVHFNRDGTLVVSGSYD-GTVRIWDTTTGQLLNTISTEDGKEV 218
Query: 191 TSAEVSQDGRYIT--TADGSTVKFWDANHFG-LVKSYN-----MPCTIESASLEPKYGNK 242
+ + S +G+++ T D +T++ W N+ +K+Y C + S+ G
Sbjct: 219 SFVKFSPNGKFVLAGTLD-NTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVT--CGKW 275
Query: 243 FVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS--EDGTIRIWQ 298
V G ED + ++ T + GH V V P ASG+ +D +++IW+
Sbjct: 276 IVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIWK 333
Score = 206 (77.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 71/267 (26%), Positives = 124/267 (46%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDT 114
T +GH ++ S + ASASAD + K+W A G + E HK + ++S+D+
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDS 100
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L+ + +K ++I+D+ + + V V++ I+S D VR+WD
Sbjct: 101 KLICSASDDKTIKIWDVESGKMV-KTLKGHKEYVFGVSFNPQSNLIVSGSFDEN-VRIWD 158
Query: 175 VRSGEIVQTLETKS-PVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIE 231
V +GE + + S PVT ++DG + + DG TV+ WD L+ + + E
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDG-TVRIWDTTTGQLLNTISTEDGKE 217
Query: 232 SASLEPKYGNKFV-AGGEDMWVRFFDFHTGNE-IACNKGHHGPVHCV--RFSPG-GESYA 286
+ ++ KFV AG D +R + ++ + + GH +C+ FS G+
Sbjct: 218 VSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIV 277
Query: 287 SGSEDGTIRIWQTGPVTNDDTETLTAN 313
+GSED I I+ T + +TL +
Sbjct: 278 TGSEDNLIYIYNLQ--TREIVQTLAGH 302
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 83/301 (27%), Positives = 143/301 (47%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAV----WSCCL 69
GH++ V + +SP +G +L S+S D + G + T GHK + WS
Sbjct: 43 GHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-- 97
Query: 70 DTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRI 128
D+N L SAS D + K+WD +G L + + H + V C+F+ ++L+++G ++ +RI
Sbjct: 98 DSNLL--VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL--ET 186
+D+ + + V V + I+S+ D G R+WD SG+ ++TL +
Sbjct: 156 WDVKTGKCL-KTLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQCLKTLIDDD 213
Query: 187 KSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMP-----CTIESASLEPKYG 240
PV+ + S +G+YI A +T+K WD + +K+Y C + S+ G
Sbjct: 214 NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTG--G 271
Query: 241 NKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS--EDGTIRIWQ 298
V+G ED V ++ T + +GH V P AS + D TI++W+
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331
Query: 299 T 299
+
Sbjct: 332 S 332
Score = 204 (76.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 71/253 (28%), Positives = 116/253 (45%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDT 114
T GH AV S N AS+SAD K+W A G + HK + ++S D+
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
+LL++ +K L+I+D++ + + V + I+S D VR+WD
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDES-VRIWD 157
Query: 175 VRSGEIVQTLETKS-PVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSY----NMP 227
V++G+ ++TL S PV++ ++DG I ++ DG + WD +K+ N P
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIWDTASGQCLKTLIDDDNPP 216
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCV--RFS-PGGES 284
+ S KY +A D ++ +D+ G + H +C+ FS GG+
Sbjct: 217 VSFVKFSPNGKY---ILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKW 273
Query: 285 YASGSEDGTIRIW 297
SGSED + IW
Sbjct: 274 IVSGSEDNLVYIW 286
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 269 (99.8 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 81/313 (25%), Positives = 144/313 (46%)
Query: 17 RPVVD-LFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALR 75
RP D ++++ + DG + S D + + ETG+ + + H+ V C T+
Sbjct: 612 RPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRF 671
Query: 76 AASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTH--LLLTGGMEKILRIFDLN 132
A+ S D K+W+++TG+++H++ EH V C F+ +H LL TG + L+++DLN
Sbjct: 672 IATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLN 731
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS---- 188
+ + + SV + D+ +L++C+ G ++LWD S +++ K
Sbjct: 732 QKECRNTMFGHT-NSVNHCRFSPDDK-LLASCSADGTLKLWDATSANERKSINVKQFFLN 789
Query: 189 ---PVTSAEV-------SQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK 238
P EV S DG I A + + +D + GL+ + +
Sbjct: 790 LEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFS 849
Query: 239 YGNKF-VAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
N V V ++ + +++A +GH VH V FSP G S+ + S+D TIR+W
Sbjct: 850 PQNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLW 909
Query: 298 QTGPVTNDDTETL 310
+T V + L
Sbjct: 910 ETKKVCKNSAVML 922
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 57/185 (30%), Positives = 88/185 (47%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW--DAL 91
L+S S D + + N TG+ F H+G V SC + +A + +S SAD +AK+W D L
Sbjct: 1058 LLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLL 1117
Query: 92 TGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD-----APPREVDRSP 145
LH H VR +FS D+ LL TG +RI++++ + AP E +
Sbjct: 1118 LP--LHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAAT 1175
Query: 146 --GSVRTVAWLHSDQTILSTCTDMGG-VRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRY 201
G V + + + ++S GG ++ W+V +GE QT T + VS D +
Sbjct: 1176 HGGWVTDLCFSPDGKMLISA----GGYIKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKT 1231
Query: 202 ITTAD 206
T D
Sbjct: 1232 YVTVD 1236
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 262 (97.3 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 74/243 (30%), Positives = 114/243 (46%)
Query: 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHL 116
EGH+ AV S ++ ASAS D + K+WD TG + H+ E H +VR+ FS D+ L
Sbjct: 293 EGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRL 352
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + + ++I+D ++ VR+V + H Q +L++ +D V++WD
Sbjct: 353 LASAS-DSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDTG 409
Query: 177 SGEIVQTLET-KSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESAS 234
+G + TLE + V S S D + + +A D STVK WD L + +
Sbjct: 410 TGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSV 469
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
+ + +D VR +D G+ +GH V V FS AS S D T+
Sbjct: 470 IFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTV 529
Query: 295 RIW 297
RIW
Sbjct: 530 RIW 532
Score = 253 (94.1 bits), Expect = 4.8e-20, P = 4.8e-20
Identities = 73/222 (32%), Positives = 110/222 (49%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V + +S D L SAS DS+ + + TG T EGH+ V S ++
Sbjct: 336 GHSDLVRSVIFSH---DSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS 391
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASAS D + K+WD TG + H+ E H+ VR+ FS D+ LL + + ++I+D
Sbjct: 392 QLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 451
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
++ VR+V + H D +L++ +D VR+WD G TLE S VT
Sbjct: 452 TGSLQ-HTLEGHRDWVRSVIFSH-DSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVT 509
Query: 192 SAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCTIES 232
S S D R + +A TV+ WD L ++++ TIE+
Sbjct: 510 SVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDATIEA 551
Score = 243 (90.6 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 75/249 (30%), Positives = 119/249 (47%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V+ + YS D L SAS D + + + ETG T EGH V S ++
Sbjct: 294 GHEAAVLSVSYSH---DSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS 350
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASAS D + K+WD TG + H+ E H+ VR+ FS D+ LL + + ++I+D
Sbjct: 351 RLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 409
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVT 191
++ VR+V + H Q +L++ +D V++WD +G + TLE + V
Sbjct: 410 TGSLQ-HTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVR 467
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDA---NHFGLVKSYNMPCTIESASLEPKYGNKFVAGG 247
S S D R + +A D TV+ WD +H ++ ++ T S S + + +
Sbjct: 468 SVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRL---LASAS 524
Query: 248 EDMWVRFFD 256
D VR +D
Sbjct: 525 NDQTVRIWD 533
Score = 188 (71.2 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 58/207 (28%), Positives = 97/207 (46%)
Query: 96 LHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWL 154
L + E H+ V + S+S D+ LL + ++ ++I+D + ++ VR+V +
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWD-TETGSLQHTLEGHSDLVRSVIFS 347
Query: 155 HSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTA-DGSTVKF 212
H D +L++ +D V++WD +G + TLE + V S S D + + +A D STVK
Sbjct: 348 H-DSRLLASASD-STVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKI 405
Query: 213 WDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP 272
WD L + + + + +D V+ +D TG+ +GH
Sbjct: 406 WDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDW 465
Query: 273 VHCVRFSPGGESYASGSEDGTIRIWQT 299
V V FS AS S+D T+RIW T
Sbjct: 466 VRSVIFSHDSRLLASASDDRTVRIWDT 492
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 47/155 (30%), Positives = 74/155 (47%)
Query: 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA 205
+V +V++ H D +L++ +D V++WD +G + TLE S V S S D R + +A
Sbjct: 298 AVLSVSYSH-DSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASA 356
Query: 206 DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIAC 265
STVK WD L + + + + +D V+ +D TG+
Sbjct: 357 SDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHT 416
Query: 266 NKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300
+GH V V FS + AS S+D T++IW TG
Sbjct: 417 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 451
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/122 (30%), Positives = 58/122 (47%)
Query: 181 VQTLET-KSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPK 238
+Q LE ++ V S S D R + +A D TVK WD L + + + +
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIF-S 347
Query: 239 YGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
+ ++ +A D V+ +D TG+ +GH V V FS + AS S+D T++IW
Sbjct: 348 HDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 407
Query: 299 TG 300
TG
Sbjct: 408 TG 409
>POMBASE|SPAC4D7.05 [details] [associations]
symbol:sum1 "translation initiation factor eIF3i"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006413 "translational
initiation" evidence=IMP] [GO:0016282 "eukaryotic 43S preinitiation
complex" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0065007 "biological regulation" evidence=NAS]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IDA] [GO:0071541 "eukaryotic translation initiation
factor 3 complex, eIF3m" evidence=IDA] [GO:0003743 "translation
initiation factor activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC4D7.05 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0071470 GO:GO:0003743 GO:GO:0034399 GO:GO:0065007
GO:GO:0002183 GO:GO:0016282 GO:GO:0071540 GO:GO:0071541
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 OMA:ATVAGWS
OrthoDB:EOG44QX8Q EMBL:Y09529 EMBL:D89187 PIR:T38796 PIR:T42745
PIR:T46558 RefSeq:NP_594958.1 ProteinModelPortal:P79083
STRING:P79083 PRIDE:P79083 EnsemblFungi:SPAC4D7.05.1 GeneID:2543537
KEGG:spo:SPAC4D7.05 NextBio:20804546 Uniprot:P79083
Length = 328
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 71/257 (27%), Positives = 124/257 (48%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH RP+ + Y+ DG L S +KD + G+ +GT+EGH GA+W+C
Sbjct: 3 PIILQGHERPLTQIKYNH---DGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSED-THLLLT-------G 120
++ ++ S +AD + ++WD TG L+ +E V+ F+ED T +L
Sbjct: 60 INKSSTLMVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRVEFNEDDTRILAVTEERMGYA 119
Query: 121 GMEKILRIFDLNRPDAP---PREVDRSPGSVRTVA-WLHSDQTILSTCTDMGGVRLWDVR 176
G + R+ ++ DA P V + S TVA W + + + + D G V +D
Sbjct: 120 GTVTVFRV-PISESDAAAETPLYVITTRESKATVAGWSYLSKFLFTGHED-GSVSRYDAI 177
Query: 177 SGEIVQTLETK---SPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIES 232
+GE V++ + S +T + D Y IT+ +T K D + F ++K+Y + +
Sbjct: 178 TGEFVESKQVHNSGSTITDLQFYPDRTYFITSCKDTTAKAIDVDSFEVIKTYLTDTPLNT 237
Query: 233 ASLEPKYGNKFVAGGED 249
+S P + GG++
Sbjct: 238 SSFTPVQDFVILGGGQE 254
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/132 (27%), Positives = 58/132 (43%)
Query: 179 EIVQTLETKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEP 237
E Q + S +T + D Y IT+ +T K D + F ++K+Y + ++S P
Sbjct: 183 ESKQVHNSGSTITDLQFYPDRTYFITSCKDTTAKAIDVDSFEVIKTYLTDTPLNTSSFTP 242
Query: 238 KYGNKFVAGGED-------------MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
+ GG++ RF+ E+ KGH GP++ + P G
Sbjct: 243 VQDFVILGGGQEARDVTTTAARQGKFEARFYHAILEEELGRVKGHFGPINTIAVHPKGTG 302
Query: 285 YASGSEDGTIRI 296
YASG EDG +R+
Sbjct: 303 YASGGEDGYVRV 314
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 82/309 (26%), Positives = 145/309 (46%)
Query: 3 KKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG 62
K A+ L GHS + + +SP +G +L S++ D+ ++ G+ T GH
Sbjct: 26 KPNYALRLTLAGHSAAISSVKFSP---NGEWLASSAADALIIIWGAYDGNCKKTLYGHSL 82
Query: 63 AVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGG 121
+ +++ R SAS D + KVWD +G L + + H V C F+ ++L+++G
Sbjct: 83 EISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGS 142
Query: 122 MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIV 181
++ ++I+++ + + + V + + I+S D G R+WD SG+ +
Sbjct: 143 FDESVKIWEVKTGKCL-KTLSAHSDPISAVNFNCNGSLIVSGSYD-GLCRIWDAASGQCL 200
Query: 182 QTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYN-----MPCTIESA 233
+TL E PV+ + S +G+YI TA +T+K WD + +K+Y C S
Sbjct: 201 RTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASF 260
Query: 234 SLEPKYGNKFV-AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS--E 290
S+ G K+V +G ED V ++ T + +GH V P AS +
Sbjct: 261 SVT---GRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALEN 317
Query: 291 DGTIRIWQT 299
D TI++W +
Sbjct: 318 DKTIKVWSS 326
>CGD|CAL0006083 [details] [associations]
symbol:TIF34 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IEA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IEA]
[GO:0043614 "multi-eIF complex" evidence=IEA] [GO:0071540
"eukaryotic translation initiation factor 3 complex, eIF3e"
evidence=IEA] [GO:0034399 "nuclear periphery" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0071470 "cellular response
to osmotic stress" evidence=IEA] [GO:0002188 "translation
reinitiation" evidence=IEA] [GO:0003743 "translation initiation
factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0006083 GO:GO:0005737
EMBL:AACQ01000017 EMBL:AACQ01000015 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0035690
GO:GO:0003743 KO:K03246 HAMAP:MF_03008 RefSeq:XP_721194.1
RefSeq:XP_721466.1 ProteinModelPortal:Q5AI86 STRING:Q5AI86
GeneID:3636872 GeneID:3637196 KEGG:cal:CaO19.10484
KEGG:cal:CaO19.2967 Uniprot:Q5AI86
Length = 350
Score = 187 (70.9 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P+ GH R + + Y+ +G L S +KD++ + G+ +GT EGH+G +WS
Sbjct: 3 PIKLMGHERSLTQVKYNR---EGDLLFSVAKDNAASIWYSSNGERLGTLEGHQGVIWSID 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGG---MEKI 125
+D A+ D + K+W G +++++ VR +FS D LL M I
Sbjct: 60 VDPETHLCATGGGDLAIKLWKVENGQCVYTWDSPSPVRRVAFSPDGKKLLAIADQVMGHI 119
Query: 126 --LRIFDLNRPDA--------PPREVD-RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
+ +FD+N DA P ++ +S GS TVA D + D G V +D
Sbjct: 120 GTVSVFDINDDDATLSQQKAEPSLVIETKSEGSKATVAGWSGDGDYIIVGHDNGYVSKYD 179
Query: 175 VRSGEIVQTLE 185
++G++V +L+
Sbjct: 180 SKTGKLVTSLQ 190
Score = 119 (46.9 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 41/153 (26%), Positives = 65/153 (42%)
Query: 185 ETKSPVTSAEVSQDGR--YITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNK 242
E +T + + + R +IT++ T D + F ++K Y + +A++ P
Sbjct: 198 EKNVSITDIQFAPEDRSYFITSSKDKTATLIDVDTFEILKVYKADAPMNTAAITPVKDFV 257
Query: 243 FVAGGED-------------MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS 289
+ GG++ RF+ EI KGH GP++ V P G Y+SG
Sbjct: 258 ILGGGQEARNVTTTAESQGKFEARFYHKIFEEEIGRVKGHFGPLNTVAVHPDGTGYSSGG 317
Query: 290 EDGTIRI------WQTGPVTNDDTETLTANGTI 316
EDG IR+ +Q + TE A GTI
Sbjct: 318 EDGFIRVHTFDKSYQDFLFDAERTERAAAAGTI 350
>UNIPROTKB|Q5AI86 [details] [associations]
symbol:TIF34 "Eukaryotic translation initiation factor 3
subunit I" species:237561 "Candida albicans SC5314" [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0006083 GO:GO:0005737
EMBL:AACQ01000017 EMBL:AACQ01000015 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0035690
GO:GO:0003743 KO:K03246 HAMAP:MF_03008 RefSeq:XP_721194.1
RefSeq:XP_721466.1 ProteinModelPortal:Q5AI86 STRING:Q5AI86
GeneID:3636872 GeneID:3637196 KEGG:cal:CaO19.10484
KEGG:cal:CaO19.2967 Uniprot:Q5AI86
Length = 350
Score = 187 (70.9 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 54/191 (28%), Positives = 91/191 (47%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P+ GH R + + Y+ +G L S +KD++ + G+ +GT EGH+G +WS
Sbjct: 3 PIKLMGHERSLTQVKYNR---EGDLLFSVAKDNAASIWYSSNGERLGTLEGHQGVIWSID 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGG---MEKI 125
+D A+ D + K+W G +++++ VR +FS D LL M I
Sbjct: 60 VDPETHLCATGGGDLAIKLWKVENGQCVYTWDSPSPVRRVAFSPDGKKLLAIADQVMGHI 119
Query: 126 --LRIFDLNRPDA--------PPREVD-RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
+ +FD+N DA P ++ +S GS TVA D + D G V +D
Sbjct: 120 GTVSVFDINDDDATLSQQKAEPSLVIETKSEGSKATVAGWSGDGDYIIVGHDNGYVSKYD 179
Query: 175 VRSGEIVQTLE 185
++G++V +L+
Sbjct: 180 SKTGKLVTSLQ 190
Score = 119 (46.9 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 41/153 (26%), Positives = 65/153 (42%)
Query: 185 ETKSPVTSAEVSQDGR--YITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNK 242
E +T + + + R +IT++ T D + F ++K Y + +A++ P
Sbjct: 198 EKNVSITDIQFAPEDRSYFITSSKDKTATLIDVDTFEILKVYKADAPMNTAAITPVKDFV 257
Query: 243 FVAGGED-------------MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS 289
+ GG++ RF+ EI KGH GP++ V P G Y+SG
Sbjct: 258 ILGGGQEARNVTTTAESQGKFEARFYHKIFEEEIGRVKGHFGPLNTVAVHPDGTGYSSGG 317
Query: 290 EDGTIRI------WQTGPVTNDDTETLTANGTI 316
EDG IR+ +Q + TE A GTI
Sbjct: 318 EDGFIRVHTFDKSYQDFLFDAERTERAAAAGTI 350
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 252 (93.8 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 76/290 (26%), Positives = 127/290 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + L +SP G + S S D+S M+ N + F GHK AV +A
Sbjct: 16 GHRDAITSLDFSP---SGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSA 72
Query: 74 LRAASASADFSAKVW-DALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
AS+S D + ++W ++ G+ + H VR+ FS D LLT ++ ++++ ++
Sbjct: 73 HLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVH 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
R + + VR + Q ++S D V+LWD S +++ T +S
Sbjct: 133 RQKIICTLREHN-NWVRCARFSPDGQLMVSVSDDRT-VKLWDASSRQLIHTFCEPGGYSS 190
Query: 193 -AEVSQDGRYITTADG-STVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGED 249
+ I TA +TV+ WD L++ Y + + + S P GN + D
Sbjct: 191 YVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPS-GNHLLTASSD 249
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ D G + GH G CV FS G+ +AS D + +W+T
Sbjct: 250 STLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRT 299
Score = 238 (88.8 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 72/246 (29%), Positives = 111/246 (45%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GH+ A+ S + + AS S D S VW+ + F HK V FS H
Sbjct: 14 FKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAH 73
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREV-DRS-PGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
LL + +K +R++ P V R+ GSVR+V + Q++L T +D ++LW
Sbjct: 74 LLASSSRDKTVRLWV---PSVKGESVLFRAHTGSVRSVCFSADGQSLL-TASDDQSIKLW 129
Query: 174 DVRSGEIVQTL-ETKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIE 231
V +I+ TL E + V A S DG+ ++ +D TVK WDA+ L+ ++ P
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYS 189
Query: 232 S-ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
S P D VR +D T + + H V+ + F P G + S
Sbjct: 190 SYVDFHPS-STCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASS 248
Query: 291 DGTIRI 296
D T++I
Sbjct: 249 DSTLKI 254
>UNIPROTKB|Q5EBE8 [details] [associations]
symbol:eif3i "Eukaryotic translation initiation factor 3
subunit I" species:8364 "Xenopus (Silurana) tropicalis" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
GeneTree:ENSGT00630000089849 HOVERGEN:HBG000900 OMA:ATVAGWS
OrthoDB:EOG4HX519 EMBL:CR855704 EMBL:BC089722 EMBL:BC127352
EMBL:BC157539 RefSeq:NP_001015781.1 UniGene:Str.31533
ProteinModelPortal:Q5EBE8 STRING:Q5EBE8 PRIDE:Q5EBE8
Ensembl:ENSXETT00000011458 GeneID:548498 KEGG:xtr:548498
Xenbase:XB-GENE-974377 InParanoid:Q5EBE8 Bgee:Q5EBE8 Uniprot:Q5EBE8
Length = 325
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 63/253 (24%), Positives = 116/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ DG L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---DGDLLFTVAKDPVVNVWYSVNGERLGTYSGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
+D + S SAD S ++WD TG L E VR C F ++++ G +
Sbjct: 60 VDWDTRHVLSGSADNSCRLWDCETGKQLALLETNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ DL P + P ++ S + + W + I++ + G + + +SG
Sbjct: 120 CFVSFIDLRDPTQIEDNEPYMKIPCSESKITSAVWGPLGENIIAG-HENGELNQYSAKSG 178
Query: 179 EIVQTLETKSP-VTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
EIV +++ S + + S+D ++T + T K +D+ K++ + SA++
Sbjct: 179 EIVNSIKEHSKQINDIQTSRDMTMFVTASKDCTSKLFDSTSLEHQKTFRTERPVNSAAIS 238
Query: 237 PKYGNKFVAGGED 249
P Y + + GG++
Sbjct: 239 PIYDHVVLGGGQE 251
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEV 195
P ++ S + + W + I++ + G + + +SGEIV +++ S + +
Sbjct: 138 PYMKIPCSESKITSAVWGPLGENIIAG-HENGELNQYSAKSGEIVNSIKEHSKQINDIQT 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D ++T + T K +D+ K++ + SA++ P Y + + GG++
Sbjct: 197 SRDMTMFVTASKDCTSKLFDSTSLEHQKTFRTERPVNSAAISPIYDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ + F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHVAFEEEFGRVKGHFGPINSLAFHPDGKSYSSGGEDGYVRIHYFDP 316
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 77/276 (27%), Positives = 117/276 (42%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW-DALT 92
L S S DS+ M+ + + F GHK AV + AS S D + ++W +
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 93 GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
G+ H VR+ F D LL+T +K ++++ +R + + VR
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFL-FSLTQHINWVRCAK 152
Query: 153 WLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYITTAD-GSTV 210
+ + I+S D V+LWD S E V + E VT + G I A +TV
Sbjct: 153 FSPDGRLIVSASDDKT-VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 211
Query: 211 KFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
K WD LV+ Y + + + S P GN + D ++ D G + GH
Sbjct: 212 KVWDTRTHRLVQHYQLHSAAVNALSFHPS-GNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Query: 270 HGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTND 305
GP V FS GE +ASG D + +W++ T D
Sbjct: 271 QGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDTVD 306
Score = 212 (79.7 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 72/245 (29%), Positives = 105/245 (42%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GH+ AV N AS S D + +W + F HK V +FS H
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRS-PGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
LL +G +K +RI+ N V R+ +VR+V + SD +L T +D V++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGEST--VFRAHTATVRSVHFC-SDGQLLVTASDDKTVKVWS 131
Query: 175 VRSGEIVQTLETK-SPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSY-NMPCTIE 231
+ +L + V A+ S DGR I +A D TVK WD V SY +
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
P G A G D V+ +D T + + H V+ + F P G + S D
Sbjct: 192 YVDFHPS-GTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSD 250
Query: 292 GTIRI 296
T++I
Sbjct: 251 STLKI 255
Score = 158 (60.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 58/211 (27%), Positives = 87/211 (41%)
Query: 97 HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
H H+ V FS +T L +G M+ L I+ + +P + +V V + S
Sbjct: 14 HFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM-KPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 157 DQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-DGSTVKFW 213
+ S D VR+W +V+ V T + V S DG+ + TA D TVK W
Sbjct: 73 GHLLASGSRDKT-VRIWVPNVKGESTVFRAHTAT-VRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 214 DANH----FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
+ F L + N + A P G V+ +D V+ +D T E +
Sbjct: 131 STHRQRFLFSLTQHINW---VRCAKFSPD-GRLIVSASDDKTVKLWD-KTSRECVHSYCE 185
Query: 270 HGP-VHCVRFSPGGESYASGSEDGTIRIWQT 299
HG V V F P G A+ D T+++W T
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDT 216
Score = 158 (60.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 66/255 (25%), Positives = 102/255 (40%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSC--CLDT 71
GH V + +SP G L S S+D + + F H V S C D
Sbjct: 59 GHKDAVTCVNFSP---SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 72 NALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
L +AS D + KVW L S +H + VR FS D L+++ +K ++++D
Sbjct: 116 QLL--VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
+ + G T H T ++ V++WD R+ +VQ + S
Sbjct: 174 KTSRECVHSYCEH--GGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAA 231
Query: 191 TSA-EVSQDGRYITTADG-STVKFWDANHFGLVKS---YNMPCTIESASLEPKYGNKFVA 245
+A G Y+ TA ST+K D L+ + + P T + S + G F +
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS---RTGEYFAS 288
Query: 246 GGED----MWVRFFD 256
GG D +W FD
Sbjct: 289 GGSDEQVMVWKSNFD 303
Score = 133 (51.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 46/211 (21%), Positives = 87/211 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
DG L++AS D + + + ++ + H V + SAS D + K+WD
Sbjct: 114 DGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 90 ALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV 148
+ + +HS+ EH V F + GM+ ++++D R + +V
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD-TRTHRLVQHYQLHSAAV 232
Query: 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADG 207
+++ H L T + +++ D+ G ++ TL + P T+ S+ G Y +
Sbjct: 233 NALSF-HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGS 291
Query: 208 ST-VKFWDANH----FGLVKSYNMPCTIESA 233
V W +N +G +K+ P SA
Sbjct: 292 DEQVMVWKSNFDTVDYGDMKARRPPPQASSA 322
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 79/297 (26%), Positives = 137/297 (46%)
Query: 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLR-----NGETGDWIGTFEGHKGAVWSCCL 69
H+R V + +S DG L SAS D + N + + F GH+ +
Sbjct: 23 HNRAVSSVKFSS---DGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 70 DTNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRI 128
++A SAS D + K+WD TG ++ + H + +F+ ++++++G ++ +RI
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL--ET 186
+D+ + + V V + I+S+ D G R+WD +G V+TL +
Sbjct: 140 WDVTTGKCL-KVLPAHSDPVTAVDFNRDGSLIVSSSYD-GLCRIWDSGTGHCVKTLIDDE 197
Query: 187 KSPVTSAEVSQDGRYIT--TADGSTVKFWDANHFGLVKSY----NMPCTIESASLEPKYG 240
PV+ S +G++I T D +T++ W+ + +K+Y N I SA G
Sbjct: 198 NPPVSFVRFSPNGKFILVGTLD-NTLRLWNISSAKFLKTYTGHVNAQYCISSA-FSVTNG 255
Query: 241 NKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ V+G ED V ++ ++ + +GH V V P ASGS D T+RIW
Sbjct: 256 KRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 179 (68.1 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 61/249 (24%), Positives = 109/249 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + D+ +S D F++SAS D + L + ETG I T GH + + +
Sbjct: 69 GHENGISDVAFSS---DARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQS 125
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
S S D + ++WD TG L H V A F+ D L+++ + + RI+D
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT----LETKS 188
+D V V + + + IL D +RLW++ S + ++T + +
Sbjct: 186 TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLD-NTLRLWNISSAKFLKTYTGHVNAQY 244
Query: 189 PVTSA-EVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPC-TIESASLEPKYGNKFVAG 246
++SA V+ R ++ ++ + V W+ N L++ T+ + + P N +G
Sbjct: 245 CISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE-NLIASG 303
Query: 247 GEDMWVRFF 255
D VR +
Sbjct: 304 SLDKTVRIW 312
Score = 167 (63.8 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 63/259 (24%), Positives = 113/259 (43%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVW------DALTGDVLHSFEHKHIVRACS 109
T H AV S ++ ASASAD + + + D + V H++ + +
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 110 FSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGG 169
FS D +++ +K L+++D+ + + + V + I+S D
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAF-CVNFNPQSNMIVSGSFDET- 136
Query: 170 VRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSY-- 224
VR+WDV +G+ ++ L S PVT+ + ++DG I ++ DG + WD+ VK+
Sbjct: 137 VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDG-LCRIWDSGTGHCVKTLID 195
Query: 225 --NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR--FS- 279
N P + P G + G D +R ++ + + GH +C+ FS
Sbjct: 196 DENPP--VSFVRFSPN-GKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSV 252
Query: 280 PGGESYASGSEDGTIRIWQ 298
G+ SGSED + +W+
Sbjct: 253 TNGKRIVSGSEDNCVHMWE 271
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 36/113 (31%), Positives = 50/113 (44%)
Query: 190 VTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIE-SASLEPKYGNKFVAGG 247
++ S D R+I +A D T+K WD L+K+ + P+ N V+G
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGS 132
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300
D VR +D TG + H PV V F+ G S S DG RIW +G
Sbjct: 133 FDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Score = 112 (44.5 bits), Expect = 0.00097, P = 0.00097
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 182 QTLETKS-PVTSAEVSQDGRYITTADGS-TVKFWDANHFG--LVKSYNMPCTIESASLEP 237
QTL + + V+S + S DGR + +A T++ + N + + E+ +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 238 KYGN--KF-VAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
+ + +F V+ +D ++ +D TG+ I GH CV F+P SGS D T+
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 295 RIW 297
RIW
Sbjct: 138 RIW 140
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 253 (94.1 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 79/290 (27%), Positives = 131/290 (45%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
+ GHS + +S D L++ S D + L N TGD TF GH G V S +
Sbjct: 769 ILKGHSHECSTMAFSS---DSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAIS 825
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
++ + S S + + K+WDA TGD+L + + +FS D+ + G + +IF
Sbjct: 826 SDGRQIVSGSIE-AVKLWDAATGDLLKTLA-SGFAGSVAFSPDSRQIAAGFKDG--KIFI 881
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
+ + ++R PG++ ++A+ D L TC+ ++ WD+ G + + + V
Sbjct: 882 WDAAGTLQKTLERHPGAIMSIAF-SPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHV 940
Query: 191 TSAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPC-TIESASLEPKYGNKFVAGGE 248
T+ +S DG+ I + T+K WDA L K+ T+E N+ +
Sbjct: 941 TTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFS--LDNRQIVSCS 998
Query: 249 DMWVRFFDFHTGNEIACNKGHHGPVHC-VRFSPGGESYASGSEDGTIRIW 297
V+ +D TG N V V SP G+ ASG +G I++W
Sbjct: 999 SEAVKIWDAATGK--VQNSFESDDVFTIVAVSPDGKHIASGHCNGRIKLW 1046
Score = 204 (76.9 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 79/315 (25%), Positives = 139/315 (44%)
Query: 38 SKDSSP-MLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVL 96
S+DS+ ML + TGD +GH + +++ + + S D + ++W+ TGD+
Sbjct: 750 SRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLE 809
Query: 97 HSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
+F H V + + S D +++G +E + +++D D GSV A+
Sbjct: 810 KTFVGHTGTVLSVAISSDGRQIVSGSIEAV-KLWDAATGDLLKTLASGFAGSV---AFSP 865
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GSTVKFW 213
+ I + D G + +WD +G + +TLE + S S D + + T ST+K W
Sbjct: 866 DSRQIAAGFKD-GKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRW 923
Query: 214 DANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPV 273
D G+ ++ + + L P G +G D ++ +D TG+ GH V
Sbjct: 924 DITIGGVQEAVGHSKHVTTMVLSPD-GKVIASGSADKTIKLWDAATGDLQKTLTGHLDTV 982
Query: 274 HCVRFSPGGESYASGSEDGTIRIWQ--TGPVTN----DDTETLTANGTIGKVKVTADEVS 327
V FS S S + ++IW TG V N DD T+ A GK + + +
Sbjct: 983 EKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQNSFESDDVFTIVAVSPDGK-HIASGHCN 1040
Query: 328 RKIEGFHIADEGKMK 342
+I+ + +A +K
Sbjct: 1041 GRIKLWDMATGSLLK 1055
Score = 170 (64.9 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 46/197 (23%), Positives = 87/197 (44%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
+PD + + KD + + G T E H GA+ S + + + S D + K
Sbjct: 864 SPDSRQIAAGFKDGKIFIWDA-AGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKR 922
Query: 88 WDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGS 147
WD G V + H V S D ++ +G +K ++++D D + + +
Sbjct: 923 WDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQ-KTLTGHLDT 981
Query: 148 VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTAD- 206
V V + ++ I+S ++ V++WD +G++ + E+ T VS DG++I +
Sbjct: 982 VEKVVFSLDNRQIVSCSSE--AVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHC 1039
Query: 207 GSTVKFWDANHFGLVKS 223
+K WD L+K+
Sbjct: 1040 NGRIKLWDMATGSLLKT 1056
Score = 61 (26.5 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 266 NKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ G+ + V FS G+ A+ S D TIR+W
Sbjct: 1136 SSGYPNWIFSVAFSSDGQHIAAASADKTIRVW 1167
Score = 45 (20.9 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 29 PDGFFLISASKDSSPMLRNGETGD 52
PD +IS D S ML + TGD
Sbjct: 681 PDSKLIISGYYDGSVMLWDTTTGD 704
Score = 41 (19.5 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 278 FSPGGESYASGSEDGTIRIW 297
FSP + S S D I++W
Sbjct: 1091 FSPDAKLILSTSTDRAIKLW 1110
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 243 (90.6 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 81/321 (25%), Positives = 140/321 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS + L + P DG + ++S DS+ +L N F H V
Sbjct: 16 GHSGGITQLRFGP---DGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKG 72
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASA D + K+W+ V F H VR+ F HL+LT +K +I+ +
Sbjct: 73 NLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVA 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
R ++ VR+ + + + +++T +D VR++DV SGE V+T T+
Sbjct: 133 RRQFVSSFAQQN-NWVRSAKFSPNGK-LVATASDDKSVRIYDVDSGECVRTF-TEERAAP 189
Query: 193 AEVSQD--GRYITTADG-STVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGE 248
+++ G + A G + +K +D + L++ Y + + + P G+ ++G +
Sbjct: 190 RQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPS-GHFLLSGSD 248
Query: 249 DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTE 308
D +R D G I GH V+ V FS G+ +A+G D + +WQ+ T D ++
Sbjct: 249 DRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTYDASQ 308
Query: 309 TLTANGTIGKVKVTADEVSRK 329
A + + VS K
Sbjct: 309 -FEAKSALASSSCESSGVSSK 328
Score = 167 (63.8 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 58/244 (23%), Positives = 108/244 (44%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDA-LTGDVLHSFEHKHIVRACSFSEDTH 115
F GH G + + + A++S D + +W+ + H V ++S +
Sbjct: 14 FTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGN 73
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
L+ + G ++ ++I++ V S +VR+V + S ++ T +D ++W V
Sbjct: 74 LVASAGHDRTVKIWEPKLRGVSGEFVAHSK-AVRSVDF-DSTGHLMLTASDDKSAKIWRV 131
Query: 176 RSGEIVQTLETKSP-VTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESA 233
+ V + ++ V SA+ S +G+ + TA D +V+ +D + V+++
Sbjct: 132 ARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQ 191
Query: 234 SLEPKYGNKF-VAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
+GN VA G + ++ FD + H PV+ V F P G SGS+D
Sbjct: 192 LAWHPWGNMLAVALGCNR-IKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDR 250
Query: 293 TIRI 296
TIRI
Sbjct: 251 TIRI 254
>UNIPROTKB|A4RDD7 [details] [associations]
symbol:TIF34 "Eukaryotic translation initiation factor 3
subunit I" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CM001235 eggNOG:COG2319
GO:GO:0003743 GO:GO:0043581 KO:K03246 HAMAP:MF_03008
OrthoDB:EOG44QX8Q RefSeq:XP_003717931.1 ProteinModelPortal:A4RDD7
STRING:A4RDD7 EnsemblFungi:MGG_01013T0 GeneID:2674740
KEGG:mgr:MGG_01013 Uniprot:A4RDD7
Length = 341
Score = 238 (88.8 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 74/255 (29%), Positives = 123/255 (48%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + ++P DG + S +KD + G+ +GT+ GH+GA+W+
Sbjct: 3 PILLSGHERALTQVKFNP---DGDLIFSVAKDQHICVWFAHNGERLGTYHGHQGAIWTVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSED-THLL-LT----GGM 122
D + A+ SAD + K+W+ TG LH++E V+ FS D T LL +T G +
Sbjct: 60 CDPTSTIIATGSADNTIKLWEIKTGRCLHTWEFPTAVKRVEFSPDGTRLLGVTEKRMGHL 119
Query: 123 EKILRI---FDLNRPDAPPREVDR-SPGSVRTVA-WLHSDQTILSTCTDMGGVRLWDVRS 177
I+ + D++ P R + S TVA W + + I++ D G V +D ++
Sbjct: 120 GTIVVLDVKLDVDAEQNPERAMTIVCDESKATVAGWSYLAKYIIAGHED-GSVSQYDAKN 178
Query: 178 GE---IVQTLETKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESA 233
G+ VQ + S + + SQD Y IT + T K A ++K+Y + SA
Sbjct: 179 GDQLHSVQIHDMGSEIRDLQWSQDRTYFITASKDKTAKLVTARDLEVLKTYPADTPLNSA 238
Query: 234 SLEPKYGNKFVAGGE 248
+ PK + GG+
Sbjct: 239 VITPKKDYVILGGGQ 253
Score = 135 (52.6 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 181 VQTLETKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKY 239
VQ + S + + SQD Y IT + T K A ++K+Y + SA + PK
Sbjct: 185 VQIHDMGSEIRDLQWSQDRTYFITASKDKTAKLVTARDLEVLKTYPADTPLNSAVITPKK 244
Query: 240 GNKFVAGGE---DMWV----------RFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYA 286
+ GG+ D+ RF+ +EI +GH GP++ V P G+ YA
Sbjct: 245 DYVILGGGQAAMDVTTTSARQGKFEARFYHKIFEDEIGRVRGHFGPLNYVAAEPNGKGYA 304
Query: 287 SGSEDGTIRIWQ 298
SG EDG +R+ Q
Sbjct: 305 SGGEDGYVRVHQ 316
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 241 (89.9 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 78/302 (25%), Positives = 142/302 (47%)
Query: 10 LVC--HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSC 67
L+C GH++ + +SP G +L ++S D + + N + T GHK V
Sbjct: 79 LMCTLEGHTKSISSAKFSPC---GKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 68 CLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKIL 126
+++ SAS D + K+++ +T + + + H + V C+F+ + L+++G ++ +
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 127 RIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-- 184
RI+D+ + + + V V++ I S D G VR+WD +G+ ++TL
Sbjct: 196 RIWDV-KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYD-GLVRIWDTANGQCIKTLVD 253
Query: 185 ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTIESASLEPKY 239
+ PV + S +G+YI ++ ST+K WD + +K Y N I A+
Sbjct: 254 DENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI-FANFSVTG 312
Query: 240 GNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS--EDGTIRIW 297
G ++G ED + ++ T + C +GH PV P ASG+ D I IW
Sbjct: 313 GKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Query: 298 QT 299
++
Sbjct: 373 RS 374
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 52/227 (22%), Positives = 97/227 (42%)
Query: 76 AASASADFSA--KVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR 133
AA ASA SA K+ L G H + + FS L T +K ++I++++
Sbjct: 66 AAGASASGSANYKLMCTLEG-------HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDH 118
Query: 134 PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTS 192
G V +AW SD + + +D ++++++ + + +TL+ + V
Sbjct: 119 MICERTLTGHKLG-VNDIAW-SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFC 176
Query: 193 AEVS-QDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW 251
+ Q ++ + +V+ WD +K+ SA + G+ +G D
Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL 236
Query: 252 VRFFDFHTGNEI-ACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
VR +D G I + PV V+FSP G+ + + D T+++W
Sbjct: 237 VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLW 283
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 241 (89.9 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 78/302 (25%), Positives = 142/302 (47%)
Query: 10 LVC--HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSC 67
L+C GH++ + +SP G +L ++S D + + N + T GHK V
Sbjct: 79 LMCTLEGHTKSISSAKFSPC---GKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 68 CLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKIL 126
+++ SAS D + K+++ +T + + + H + V C+F+ + L+++G ++ +
Sbjct: 136 AWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 127 RIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-- 184
RI+D+ + + + V V++ I S D G VR+WD +G+ ++TL
Sbjct: 196 RIWDV-KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYD-GLVRIWDTANGQCIKTLVD 253
Query: 185 ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTIESASLEPKY 239
+ PV + S +G+YI ++ ST+K WD + +K Y N I A+
Sbjct: 254 DENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCI-FANFSVTG 312
Query: 240 GNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS--EDGTIRIW 297
G ++G ED + ++ T + C +GH PV P ASG+ D I IW
Sbjct: 313 GKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Query: 298 QT 299
++
Sbjct: 373 RS 374
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 52/227 (22%), Positives = 97/227 (42%)
Query: 76 AASASADFSA--KVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR 133
AA ASA SA K+ L G H + + FS L T +K ++I++++
Sbjct: 66 AAGASASGSANYKLMCTLEG-------HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDH 118
Query: 134 PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTS 192
G V +AW SD + + +D ++++++ + + +TL+ + V
Sbjct: 119 MICERTLTGHKLG-VNDIAW-SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFC 176
Query: 193 AEVS-QDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW 251
+ Q ++ + +V+ WD +K+ SA + G+ +G D
Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGL 236
Query: 252 VRFFDFHTGNEI-ACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
VR +D G I + PV V+FSP G+ + + D T+++W
Sbjct: 237 VRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLW 283
>UNIPROTKB|Q66J51 [details] [associations]
symbol:eif3i "Eukaryotic translation initiation factor 3
subunit I" species:8355 "Xenopus laevis" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 GO:GO:0005852
KO:K03246 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900 EMBL:BC081058
RefSeq:NP_001087664.1 UniGene:Xl.77336 ProteinModelPortal:Q66J51
PRIDE:Q66J51 GeneID:447488 KEGG:xla:447488 Xenbase:XB-GENE-974385
Uniprot:Q66J51
Length = 325
Score = 234 (87.4 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 62/253 (24%), Positives = 115/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ DG L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---DGDLLFTVAKDPVVNVWYSVNGERLGTYNGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
+D S SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 VDWETRHVLSGSADNSCRLWDCETGKQLALLQTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ DL P + P ++ S + + W + I++ + G + + +SG
Sbjct: 120 CFVSFIDLRDPSQIEDNEPYMKIPCSESKITSAVWGPLGENIIAG-HENGELNHYSAKSG 178
Query: 179 EIVQTLETKSP-VTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
EIV +++ S + + S+D ++T + T K +D+ K++ + SA++
Sbjct: 179 EIVNSIKEHSKQINDIQTSRDMTMFVTASKDCTSKLFDSTSLEHQKTFRTERPVNSAAVS 238
Query: 237 PKYGNKFVAGGED 249
P Y + + GG++
Sbjct: 239 PIYDHVVLGGGQE 251
Score = 168 (64.2 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 46/180 (25%), Positives = 83/180 (46%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEV 195
P ++ S + + W + I++ + G + + +SGEIV +++ S + +
Sbjct: 138 PYMKIPCSESKITSAVWGPLGENIIAG-HENGELNHYSAKSGEIVNSIKEHSKQINDIQT 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D ++T + T K +D+ K++ + SA++ P Y + + GG++
Sbjct: 197 SRDMTMFVTASKDCTSKLFDSTSLEHQKTFRTERPVNSAAVSPIYDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ + F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHVAFEEEFGRVKGHFGPINSLAFHPDGKSYSSGGEDGYVRIHYFDP 316
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 243 (90.6 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 78/290 (26%), Positives = 125/290 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + L ++P+G L +AS D+ ML N + + GHK V S +
Sbjct: 16 GHKAAITSL---DLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHG 72
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASAS D + ++W F+ H VR+ FS D L T +K ++++ +
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMY 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
R + R VR A D ++ +C++ +++WD + + V +
Sbjct: 133 RQRFL-YSLYRHTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190
Query: 193 -AEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGED 249
+ + G I +A TVK WD L++ Y + + S P GN + D
Sbjct: 191 FVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS-GNYLITASSD 249
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ D G I +GH GPV V FS GGE +ASG D + +W+T
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 212 (79.7 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 62/246 (25%), Positives = 113/246 (45%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GHK A+ S L N + A+AS D +W+ + + HK +V + FS +
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 116 LLLTGGMEKILRIFDLNRPDAPPR--EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
LL + ++ +R++ PD + E VR+V + +D L+T ++ +++W
Sbjct: 74 LLASASRDRTVRLWI---PDKRGKFSEFKAHTAPVRSVDF-SADGQFLATASEDKSIKVW 129
Query: 174 DVRSGEIVQTLETKSP-VTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIE 231
+ + +L + V A+ S DGR I + ++ T+K WD + V +++
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 232 S-ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
+ P G + G D V+ +D + + H G V+C+ F P G + S
Sbjct: 190 NFVDFNPS-GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASS 248
Query: 291 DGTIRI 296
DGT++I
Sbjct: 249 DGTLKI 254
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 241 (89.9 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 75/290 (25%), Positives = 126/290 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + V+ + P+ L + S D S M+ N F GH + +
Sbjct: 16 GH-KDVISC--ADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSG 72
Query: 74 LRAASASADFSAKVWD-ALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
AS+S D + ++W ++ G+ H VR+ FS D L+T +K ++++ +
Sbjct: 73 SLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVE 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVT 191
R ++R VR A D ++++C D VRLWD S + + + T
Sbjct: 133 RKKFL-YSLNRHTNWVRC-ARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 192 SAEVSQDGRYITTADG-STVKFWDANHFGLVKSYNMP-CTIESASLEPKYGNKFVAGGED 249
+ + G I ++ +T+K WD L++ Y + + S P GN ++G D
Sbjct: 191 FVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPS-GNYLISGSSD 249
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ D G I GH GPV V FS G+ +ASG D + +W+T
Sbjct: 250 STIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKT 299
Score = 197 (74.4 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 63/247 (25%), Positives = 106/247 (42%)
Query: 57 FEGHKGAVWSCC-LDTNALRAASASADFSAKVWD-ALTGDVLHSFEHKHIVRACSFSEDT 114
F+GHK + SC + N + A+ S D S +W+ A H ++ +F+
Sbjct: 14 FKGHKDVI-SCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSG 72
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L+ + ++ +R++ + SVR+V + Q ++ T +D V++W
Sbjct: 73 SLVASSSRDQTVRLWTPSIK-GESTVFKAHTASVRSVHFSRDGQRLV-TASDDKSVKVWG 130
Query: 175 VRSGEIVQTLETKSP-VTSAEVSQDGRYITTA-DGSTVKFWD-ANH--FGLVKSYNMPCT 229
V + + +L + V A S DGR I + D TV+ WD ++H + Y T
Sbjct: 131 VERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS 289
+ G + G D ++ +D T I K H+ V+C F P G SGS
Sbjct: 191 FVDFNSS---GTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGS 247
Query: 290 EDGTIRI 296
D TI+I
Sbjct: 248 SDSTIKI 254
Score = 164 (62.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 58/208 (27%), Positives = 85/208 (40%)
Query: 97 HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH- 155
H HK ++ F+ + L TG +K L I++L AP R G + ++
Sbjct: 13 HFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNL----APKARAFRFVGHTDVITGVNF 68
Query: 156 --SDQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDG-RYITTADGSTV 210
S + S+ D VRLW ++ V T S V S S+DG R +T +D +V
Sbjct: 69 APSGSLVASSSRDQT-VRLWTPSIKGESTVFKAHTAS-VRSVHFSRDGQRLVTASDDKSV 126
Query: 211 KFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
K W + S N + A P G + G+D VR +D + I +
Sbjct: 127 KVWGVERKKFLYSLNRHTNWVRCARFSPD-GRLIASCGDDRTVRLWDTSSHQCINIFTDY 185
Query: 270 HGPVHCVRFSPGGESYASGSEDGTIRIW 297
G V F+ G AS D TI+IW
Sbjct: 186 GGSATFVDFNSSGTCIASSGADNTIKIW 213
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 236 (88.1 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 83/303 (27%), Positives = 137/303 (45%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDT 71
GHS V + + P + S S D S +L N G+ ++ G GHKGA+
Sbjct: 64 GHSGEVFAVRFDPTAQH---IASGSMDRSILLWNTYGQCENY-GILSGHKGAILDLQWSR 119
Query: 72 NALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSE-DTHLLLTGGMEKILRIF 129
++ SASAD + WD +G + + H+ ++ + S+ +L++ + + I+
Sbjct: 120 DSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIW 179
Query: 130 DLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-S 188
D + +A P + VA + + S D + +WD+R IV ++
Sbjct: 180 DPRQKEAIDYLETELP--ITAVAQSEAGNEVFSGGID-NAIHVWDIRKKAIVYSMAGHMD 236
Query: 189 PVTSAEVSQDGR-YITTADGSTVKFWDANHFGL----VKSYN-MPCTIES----ASLEPK 238
+TS EVS D + ++ + STV+ WD F +++Y+ P +E AS P
Sbjct: 237 TITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPA 296
Query: 239 YGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESY-ASGSEDGTIRIW 297
G+K AG D V +DF TG + GH G V+ VRF+P E S S D + +
Sbjct: 297 -GDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLG 355
Query: 298 QTG 300
+ G
Sbjct: 356 ELG 358
Score = 171 (65.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 63/289 (21%), Positives = 120/289 (41%)
Query: 36 SASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDV 95
+A SS ++ + D G + V S D ++A ++ +A + + LTG
Sbjct: 10 AAFGSSSQLVVKRKKSD--GGLDNSAAVVKSSGQDGTLVQAVPRTSGLNAPIME-LTG-- 64
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
HS E V A F + +G M++ + +++ + G++ + W
Sbjct: 65 -HSGE----VFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILSGHKGAILDLQWSR 119
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQT-LETKSPVTSAEVSQDGR--YITTADGSTVKF 212
+TI S DM + WD+ SG+ ++ + + + S E+S+ G+ ++ +D T+
Sbjct: 120 DSKTIFSASADMT-LASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGI 178
Query: 213 WDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP 272
WD + I +A + + GN+ +GG D + +D + GH
Sbjct: 179 WDPRQKEAIDYLETELPI-TAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDT 237
Query: 273 VHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANGT-IGKVK 320
+ + SP ++ S S D T+R W P + T +G +G K
Sbjct: 238 ITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEK 286
>RGD|1560498 [details] [associations]
symbol:Eif3i-ps1 "eukaryotic translation initiation factor 3,
subunit I, pseudogene 1" species:10116 "Rattus norvegicus"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
KO:K03246 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900
OrthoDB:EOG4HX519 EMBL:BC158748 EMBL:BC158821 IPI:IPI00766018
RefSeq:NP_001108507.1 UniGene:Rn.162577 ProteinModelPortal:B0BNA7
STRING:B0BNA7 PhosphoSite:B0BNA7 PRIDE:B0BNA7 GeneID:682390
KEGG:rno:682390 RGD:728910 NextBio:722902 ArrayExpress:B0BNA7
Genevestigator:B0BNA7 Uniprot:B0BNA7
Length = 325
Score = 231 (86.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 60/253 (23%), Positives = 115/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 ADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P ++ + + + W + I++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYMKIPCNDSKITSAVWGPLGECIIAG-HESGELNQYSAKSG 178
Query: 179 EI-VQTLETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E+ V E + ++S+D ++T + +T K +D+ K++ + SA+L
Sbjct: 179 EVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTSLEHQKTFRTERPVNSAALS 238
Query: 237 PKYGNKFVAGGED 249
P Y + + GG++
Sbjct: 239 PNYDHVVLGGGQE 251
Score = 174 (66.3 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI-VQTLETKSPVTSAEV 195
P ++ + + + W + I++ + G + + +SGE+ V E + ++
Sbjct: 138 PYMKIPCNDSKITSAVWGPLGECIIAG-HESGELNQYSAKSGEVLVNVKEHSRQINDIQL 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D ++T + +T K +D+ K++ + SA+L P Y + + GG++
Sbjct: 197 SRDMTMFVTASKDNTAKLFDSTSLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>UNIPROTKB|Q13347 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9606 "Homo sapiens" [GO:0006413 "translational
initiation" evidence=IC;IDA;TAS] [GO:0003743 "translation
initiation factor activity" evidence=IC;IDA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743
GO:GO:0005852 Reactome:REACT_1762 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900 OMA:ATVAGWS
OrthoDB:EOG4HX519 EMBL:U39067 EMBL:U36764 EMBL:BC000413
EMBL:BC003140 IPI:IPI00012795 PIR:S60335 RefSeq:NP_003748.1
UniGene:Hs.530096 ProteinModelPortal:Q13347 SMR:Q13347
DIP:DIP-31116N IntAct:Q13347 MINT:MINT-5004513 STRING:Q13347
PhosphoSite:Q13347 DMDM:2494895 DOSAC-COBS-2DPAGE:Q13347 OGP:Q13347
PaxDb:Q13347 PeptideAtlas:Q13347 PRIDE:Q13347 DNASU:8668
Ensembl:ENST00000373586 GeneID:8668 KEGG:hsa:8668 UCSC:uc001bur.4
GeneCards:GC01P032687 HGNC:HGNC:3272 HPA:HPA029939 HPA:HPA029940
MIM:603911 neXtProt:NX_Q13347 PharmGKB:PA162384875
InParanoid:Q13347 PhylomeDB:Q13347 ChiTaRS:EIF3I GenomeRNAi:8668
NextBio:32515 ArrayExpress:Q13347 Bgee:Q13347 CleanEx:HS_EIF3I
Genevestigator:Q13347 GermOnline:ENSG00000084623 Uniprot:Q13347
Length = 325
Score = 230 (86.0 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 60/253 (23%), Positives = 115/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 ADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P ++ + + + W + I++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAG-HESGELNQYSAKSG 178
Query: 179 EI-VQTLETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E+ V E + ++S+D ++T + +T K +D+ K++ + SA+L
Sbjct: 179 EVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALS 238
Query: 237 PKYGNKFVAGGED 249
P Y + + GG++
Sbjct: 239 PNYDHVVLGGGQE 251
Score = 173 (66.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI-VQTLETKSPVTSAEV 195
P ++ + + + W + I++ + G + + +SGE+ V E + ++
Sbjct: 138 PYMKIPCNDSKITSAVWGPLGECIIAG-HESGELNQYSAKSGEVLVNVKEHSRQINDIQL 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D ++T + +T K +D+ K++ + SA+L P Y + + GG++
Sbjct: 197 SRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 237 (88.5 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 78/290 (26%), Positives = 124/290 (42%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + L ++P+G L +AS D+ ML N + + GHK V S +
Sbjct: 16 GHKAAITSL---DLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHG 72
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASAS D + ++W F+ H VR+ FS D L T +K ++++ +
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMY 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
R + R VR A D ++ +C++ +++WD + + V +
Sbjct: 133 RQRFL-YSLYRHTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190
Query: 193 -AEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGED 249
+ + G I +A TVK WD L++ Y + + S P N V D
Sbjct: 191 FVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPS-DNYLVTASSD 249
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ D G I +GH GPV V FS GGE +ASG D + +W+T
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 206 (77.6 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 61/246 (24%), Positives = 112/246 (45%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GHK A+ S L N + A+AS D +W+ + + HK +V + FS +
Sbjct: 14 FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGN 73
Query: 116 LLLTGGMEKILRIFDLNRPDAPPR--EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
LL + ++ +R++ PD + E VR+V + +D L+T ++ +++W
Sbjct: 74 LLASASRDRTVRLWI---PDKRGKFSEFKAHTAPVRSVDF-SADGQFLATASEDKSIKVW 129
Query: 174 DVRSGEIVQTLETKSP-VTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIE 231
+ + +L + V A+ S DGR I + ++ T+K WD + V +++
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 189
Query: 232 S-ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
+ P G + G D V+ +D + + H G V+C+ F P + S
Sbjct: 190 NFVDFNPS-GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASS 248
Query: 291 DGTIRI 296
DGT++I
Sbjct: 249 DGTLKI 254
>MGI|MGI:1860763 [details] [associations]
symbol:Eif3i "eukaryotic translation initiation factor 3,
subunit I" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISO;IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1860763 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006413 eggNOG:COG2319
GO:GO:0003743 GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 OMA:ATVAGWS OrthoDB:EOG4HX519 ChiTaRS:EIF3I
EMBL:AF188297 EMBL:AF271072 EMBL:AK012375 EMBL:AK002896
EMBL:AK010781 EMBL:BC029625 IPI:IPI00269613 RefSeq:NP_061269.1
UniGene:Mm.250874 ProteinModelPortal:Q9QZD9 SMR:Q9QZD9
MINT:MINT-1869798 STRING:Q9QZD9 PhosphoSite:Q9QZD9
REPRODUCTION-2DPAGE:Q9QZD9 PaxDb:Q9QZD9 PRIDE:Q9QZD9
Ensembl:ENSMUST00000102593 GeneID:54709 KEGG:mmu:54709
InParanoid:Q9QZD9 NextBio:311544 Bgee:Q9QZD9 Genevestigator:Q9QZD9
GermOnline:ENSMUSG00000028798 Uniprot:Q9QZD9
Length = 325
Score = 229 (85.7 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 59/253 (23%), Positives = 115/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 ADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P ++ + + + W + +++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYMKIPCNDSKITSAVWGPLGECVIAG-HESGELNQYSAKSG 178
Query: 179 EI-VQTLETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E+ V E + ++S+D ++T + +T K +D+ K++ + SA+L
Sbjct: 179 EVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALS 238
Query: 237 PKYGNKFVAGGED 249
P Y + + GG++
Sbjct: 239 PNYDHVVLGGGQE 251
Score = 172 (65.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/180 (25%), Positives = 82/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI-VQTLETKSPVTSAEV 195
P ++ + + + W + +++ + G + + +SGE+ V E + ++
Sbjct: 138 PYMKIPCNDSKITSAVWGPLGECVIAG-HESGELNQYSAKSGEVLVNVKEHSRQINDIQL 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D ++T + +T K +D+ K++ + SA+L P Y + + GG++
Sbjct: 197 SRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>UNIPROTKB|F1PPR0 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006413 "translational initiation"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 GeneTree:ENSGT00630000089849
OMA:ATVAGWS EMBL:AAEX03001657 Ensembl:ENSCAFT00000017014
Uniprot:F1PPR0
Length = 325
Score = 229 (85.7 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 60/253 (23%), Positives = 115/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYMGHSGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 ADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P ++ + + + W + I++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAG-HEGGELNQYSAKSG 178
Query: 179 EI-VQTLETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E+ V E + ++S+D ++T + +T K +D+ K++ + SA+L
Sbjct: 179 EVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALS 238
Query: 237 PKYGNKFVAGGED 249
P Y + + GG++
Sbjct: 239 PNYDHVVLGGGQE 251
Score = 171 (65.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI-VQTLETKSPVTSAEV 195
P ++ + + + W + I++ + G + + +SGE+ V E + ++
Sbjct: 138 PYMKIPCNDSKITSAVWGPLGECIIAG-HEGGELNQYSAKSGEVLVNVKEHSRQINDIQL 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D ++T + +T K +D+ K++ + SA+L P Y + + GG++
Sbjct: 197 SRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 233 (87.1 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 77/297 (25%), Positives = 138/297 (46%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH++ + + +SP G FL ++S D + + N T GHK V ++
Sbjct: 77 GHTKSISAVKFSPC---GKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADS 133
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+AS D + K+++ T + + + H + V C+F+ + L+++G ++ +RI+D+
Sbjct: 134 KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDV- 192
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL--ETKSPV 190
R + + V V++ I S D G VR+WD +G+ V+TL + PV
Sbjct: 193 RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYD-GLVRIWDTANGQCVKTLVDDENPPV 251
Query: 191 TSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY-----NMPCTIESASLEPKYGNKFV 244
+ S +G+YI +++ +T+K WD +K Y N C + S+ G +
Sbjct: 252 AFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTG--GKWII 309
Query: 245 AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS--EDGTIRIWQT 299
+G ED + ++ T + +GH V P ASG+ D TIRIW++
Sbjct: 310 SGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIWRS 366
Score = 198 (74.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 67/255 (26%), Positives = 117/255 (45%)
Query: 54 IGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE 112
I T EGH ++ + ++SAD + K+W+ + HK V ++S
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA 131
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
D+ ++T +K L+I+++ P + + + + +++ + + VR+
Sbjct: 132 DSKSIVTASDDKTLKIYEV--PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSY----N 225
WDVR+G V+TL S PV++ ++DG IT+ DG V+ WD + VK+ N
Sbjct: 190 WDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDG-LVRIWDTANGQCVKTLVDDEN 248
Query: 226 MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCV--RFS-PGG 282
P S KY ++ D ++ +DF G + +GH +C+ FS GG
Sbjct: 249 PPVAFVKFSPNGKY---ILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGG 305
Query: 283 ESYASGSEDGTIRIW 297
+ SGSED I +W
Sbjct: 306 KWIISGSEDCKIYVW 320
>UNIPROTKB|F1SV90 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006413 "translational initiation" evidence=IEA]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 KO:K03246 CTD:8668
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:FP102820
RefSeq:NP_001231553.1 UniGene:Ssc.17315 Ensembl:ENSSSCT00000004007
GeneID:100521499 KEGG:ssc:100521499 Uniprot:F1SV90
Length = 325
Score = 228 (85.3 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 60/253 (23%), Positives = 115/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 ADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P ++ + + + W + I++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYMKIPCNDSKITSAVWGPLGECIIAG-HEGGELNQYSAKSG 178
Query: 179 EI-VQTLETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E+ V E + ++S+D ++T + +T K +D+ K++ + SA+L
Sbjct: 179 EVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALS 238
Query: 237 PKYGNKFVAGGED 249
P Y + + GG++
Sbjct: 239 PNYDHVVLGGGQE 251
Score = 171 (65.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI-VQTLETKSPVTSAEV 195
P ++ + + + W + I++ + G + + +SGE+ V E + ++
Sbjct: 138 PYMKIPCNDSKITSAVWGPLGECIIAG-HEGGELNQYSAKSGEVLVNVKEHSRQINDIQL 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D ++T + +T K +D+ K++ + SA+L P Y + + GG++
Sbjct: 197 SRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>UNIPROTKB|Q5R7R2 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9601 "Pongo abelii" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
HOVERGEN:HBG000900 EMBL:CR860050 RefSeq:NP_001126286.1
UniGene:Pab.18842 ProteinModelPortal:Q5R7R2 PRIDE:Q5R7R2
GeneID:100173261 KEGG:pon:100173261 InParanoid:Q5R7R2
Uniprot:Q5R7R2
Length = 325
Score = 228 (85.3 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 60/253 (23%), Positives = 114/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F +++ G +
Sbjct: 60 ADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGSIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P ++ + + + W + I++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAG-HESGELNQYSAKSG 178
Query: 179 EI-VQTLETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E+ V E + ++S+D ++T + +T K +D+ K++ + SA+L
Sbjct: 179 EVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALS 238
Query: 237 PKYGNKFVAGGED 249
P Y + + GG++
Sbjct: 239 PNYDHVVLGGGQE 251
Score = 163 (62.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/180 (25%), Positives = 81/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI-VQTLETKSPVTSAEV 195
P ++ + + + W + I++ + G + + +SGE+ V E + ++
Sbjct: 138 PYMKIPCNDSKITSAVWGPLGECIIAG-HESGELNQYSAKSGEVLVNVKEHSRQINDIQL 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D ++T + +T K +D+ K++ + SA+L P Y + + GG++
Sbjct: 197 SRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH G ++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGLINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 227 (85.0 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 67/245 (27%), Positives = 105/245 (42%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVW-DALTGDVLHSFEHKHIVRACSFSEDTHLL 117
GHK AV + AS S D + +W ++ G+ H VR+ FS D L
Sbjct: 60 GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSL 119
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
+T +K ++++ ++R + + VR A D ++++ +D V+LWD S
Sbjct: 120 VTASDDKTIKVWTVHRQKFL-FSLSQHINWVRC-ARFSPDGRLIASASDDKTVKLWDKTS 177
Query: 178 GEIVQTL-ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNM-PCTIESAS 234
E + + E E G I A TVK WD L++ Y + + S S
Sbjct: 178 RECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLS 237
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
P GN + D ++ D G + GH GP CV FS G+ +ASG D +
Sbjct: 238 FHPS-GNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQV 296
Query: 295 RIWQT 299
+W+T
Sbjct: 297 MVWKT 301
Score = 183 (69.5 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 63/244 (25%), Positives = 98/244 (40%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F GH+ A+ S N + AS S D K+W + HK V FS H
Sbjct: 16 FRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGH 75
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
L+ +G +K + ++ + +VR+V + SD L T +D +++W V
Sbjct: 76 LVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHF-SSDGQSLVTASDDKTIKVWTV 133
Query: 176 RSGEIVQTLETK-SPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSY-NMPCTIES 232
+ + +L + V A S DGR I +A D TVK WD + S+
Sbjct: 134 HRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANH 193
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P G A G D V+ +D + + H V+ + F P G + S D
Sbjct: 194 VEFHPS-GTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDS 252
Query: 293 TIRI 296
T++I
Sbjct: 253 TLKI 256
Score = 153 (58.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 62/242 (25%), Positives = 101/242 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V+ + +SP G + S S+D + L F+ H V S ++
Sbjct: 60 GHKDAVMCVQFSP---SGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDG 116
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+AS D + KVW L S +H + VR FS D L+ + +K ++++D
Sbjct: 117 QSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKT 176
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
+ + G V + S I + TD V++WDVR ++Q + + V
Sbjct: 177 SRECIHSFCEHG-GFANHVEFHPSGTCIAAAGTDKT-VKVWDVRMNRLLQHYQVHTAAVN 234
Query: 192 SAEVSQDGRYITTADG-STVKFWDANHFGLVKS---YNMPCTIESASLEPKYGNKFVAGG 247
S G Y+ TA ST+K D L+ + + P T + S + G+ F +GG
Sbjct: 235 SLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFS---RTGDFFASGG 291
Query: 248 ED 249
D
Sbjct: 292 SD 293
Score = 134 (52.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 51/206 (24%), Positives = 84/206 (40%)
Query: 97 HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
H H+ + + FS + L +G M+ L+I+ + +P + +V V + S
Sbjct: 15 HFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSM-KPQMRAYCLVGHKDAVMCVQFSPS 73
Query: 157 DQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-DGSTVKFW 213
+ S D V LW V+ V T + V S S DG+ + TA D T+K W
Sbjct: 74 GHLVASGSRDKT-VCLWVPSVKGESTVFKAHTAT-VRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 214 DANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP 272
+ + S + + A P G + +D V+ +D T E + HG
Sbjct: 132 TVHRQKFLFSLSQHINWVRCARFSPD-GRLIASASDDKTVKLWD-KTSRECIHSFCEHGG 189
Query: 273 -VHCVRFSPGGESYASGSEDGTIRIW 297
+ V F P G A+ D T+++W
Sbjct: 190 FANHVEFHPSGTCIAAAGTDKTVKVW 215
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 45/209 (21%), Positives = 87/209 (41%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
V H+ V + +S DG L++AS D + + ++ + H V
Sbjct: 99 VFKAHTATVRSVHFSS---DGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFS 155
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIF 129
+ ASAS D + K+WD + + +HSF EH F + G +K ++++
Sbjct: 156 PDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVW 215
Query: 130 DLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KS 188
D+ R + + +V ++++ H L T ++ +++ D+ G ++ TL +
Sbjct: 216 DV-RMNRLLQHYQVHTAAVNSLSF-HPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQG 273
Query: 189 PVTSAEVSQDGRYITTADGST-VKFWDAN 216
P T S+ G + + V W N
Sbjct: 274 PATCVAFSRTGDFFASGGSDEQVMVWKTN 302
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 235 (87.8 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 77/290 (26%), Positives = 125/290 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + + +SP G L +AS D+ ML N + + GHK V S
Sbjct: 16 GHKAAITSVDFSP---SGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLG 72
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASAS D + ++W F+ H VR+ FS D L T +K ++++++
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMY 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
R + R VR A D ++ +C++ +++WD + + V +
Sbjct: 133 RQRFL-YSLYRHTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190
Query: 193 -AEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGED 249
+ + +G I +A TVK WD L++ Y + + S P GN + D
Sbjct: 191 FVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPS-GNYIITASSD 249
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ D G I +GH GPV V FS GGE ++SG D + +W+T
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRT 299
Score = 203 (76.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 59/244 (24%), Positives = 110/244 (45%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT-GDVLHSFEHKHIVRACSFSEDTH 115
F+GHK A+ S + + A+AS D +W+ HK +V + FS +
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGN 73
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL + ++ +R++ ++ E VR+V + +D L+T ++ +++W++
Sbjct: 74 LLASASRDRTVRLWIPDKR-GKSSEFKAHTAPVRSVDF-SADGQFLATASEDKSIKVWNM 131
Query: 176 RSGEIVQTLETKSP-VTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIES- 232
+ +L + V A+ S DGR I + ++ T+K WD + V +++ +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P G + G D V+ +D + + H G V+CV F P G + S DG
Sbjct: 192 VDFNPN-GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDG 250
Query: 293 TIRI 296
T++I
Sbjct: 251 TLKI 254
>UNIPROTKB|Q5E966 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9913 "Bos taurus" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743
GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
EMBL:BT021054 EMBL:BC103177 IPI:IPI00692672 RefSeq:NP_001015628.1
UniGene:Bt.37139 ProteinModelPortal:Q5E966 STRING:Q5E966
PRIDE:Q5E966 Ensembl:ENSBTAT00000019134 GeneID:521747
KEGG:bta:521747 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 InParanoid:Q5E966 OMA:ATVAGWS OrthoDB:EOG4HX519
NextBio:20873359 Uniprot:Q5E966
Length = 325
Score = 227 (85.0 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 60/253 (23%), Positives = 114/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 ADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P + + + + W + I++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIDSNEPYMRIPCNDSKITSAVWGPLGECIIAG-HEGGELNQYSAKSG 178
Query: 179 EI-VQTLETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E+ V E + ++S+D ++T + +T K +D+ K++ + SA+L
Sbjct: 179 EVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALS 238
Query: 237 PKYGNKFVAGGED 249
P Y + + GG++
Sbjct: 239 PNYDHVVLGGGQE 251
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI-VQTLETKSPVTSAEV 195
P + + + + W + I++ + G + + +SGE+ V E + ++
Sbjct: 138 PYMRIPCNDSKITSAVWGPLGECIIAG-HEGGELNQYSAKSGEVLVNVKEHSRQINDIQL 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D ++T + +T K +D+ K++ + SA+L P Y + + GG++
Sbjct: 197 SRDMTMFVTASKDNTAKLFDSTTLEHQKTFRTERPVNSAALSPNYDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 234 (87.4 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 76/290 (26%), Positives = 121/290 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + +SP + +AS D+ ML + + + GHK V S
Sbjct: 16 GHKAAITSADFSPNCKQ---IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASAS D + ++W F+ H VR+ FS D L+T +K ++++ +
Sbjct: 73 NLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMY 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
R + R VR A D ++ +C++ +++WD S + V +
Sbjct: 133 RQRFL-YSLYRHTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFAN 190
Query: 193 -AEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGED 249
+ S +G I +A V+ WD L++ Y + C + S P GN V D
Sbjct: 191 FVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPS-GNSLVTASSD 249
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
V+ D G I +GH GPV V FS GE + SG D + +W+T
Sbjct: 250 GTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRT 299
Score = 217 (81.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 63/244 (25%), Positives = 109/244 (44%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GHK A+ S N + A+AS D +W + + HK +V + FS +
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL + +K +R++ L+R E VR+V + +D L T ++ +++W +
Sbjct: 74 LLASASRDKTVRLWVLDRK-GKSSEFKAHTAPVRSVDF-SADGQFLVTASEDKSIKVWSM 131
Query: 176 RSGEIVQTLETKSP-VTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIES- 232
+ +L + V A+ S DGR I + ++ T+K WD V +++ +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANF 191
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P G + G D VR +D + + H V+C+ F P G S + S DG
Sbjct: 192 VDFSPN-GTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDG 250
Query: 293 TIRI 296
T++I
Sbjct: 251 TVKI 254
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 231 (86.4 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 73/270 (27%), Positives = 115/270 (42%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW-DALT 92
L S S DS+ M+ + + F GHK AV + AS S D + ++W +
Sbjct: 34 LASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 93 GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
G+ H VR+ F D L+T +K ++++ +R + + VR
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFL-FSLTQHINWVRCAK 152
Query: 153 WLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYITTAD-GSTV 210
+ + I+S D V+LWD S E + + E VT + G I A +TV
Sbjct: 153 FSPDGRLIVSASDDKT-VKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 211
Query: 211 KFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
K WDA L++ Y + + + S P GN + D ++ D G + GH
Sbjct: 212 KVWDARTHRLLQHYQLHSAAVNALSFHPS-GNYLITASSDSTLKILDLMEGRLLYTLHGH 270
Query: 270 HGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
GP V FS GE +ASG D + +W++
Sbjct: 271 QGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 206 (77.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 69/245 (28%), Positives = 105/245 (42%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GH+ AV N AS S D + +W + F HK V +FS H
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRS-PGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
LL +G +K +RI+ N V R+ +VR+V + Q+++ T +D V++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGEST--VFRAHTATVRSVHFCSDGQSLV-TASDDKTVKVWS 131
Query: 175 VRSGEIVQTLETK-SPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSY-NMPCTIE 231
+ +L + V A+ S DGR I +A D TVK WD + SY +
Sbjct: 132 THRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVT 191
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
P G A G D V+ +D T + + H V+ + F P G + S D
Sbjct: 192 YVDFHPS-GTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSD 250
Query: 292 GTIRI 296
T++I
Sbjct: 251 STLKI 255
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 65/255 (25%), Positives = 103/255 (40%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSC--CLDT 71
GH V + +SP G L S S+D + + F H V S C D
Sbjct: 59 GHKDAVTCVNFSP---SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 72 NALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
+L +AS D + KVW L S +H + VR FS D L+++ +K ++++D
Sbjct: 116 QSL--VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
+ + G T H T ++ V++WD R+ ++Q + S
Sbjct: 174 KTSRECIHSYCEH--GGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAA 231
Query: 191 TSA-EVSQDGRYITTADG-STVKFWDANHFGLVKS---YNMPCTIESASLEPKYGNKFVA 245
+A G Y+ TA ST+K D L+ + + P T + S + G F +
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS---RTGEYFAS 288
Query: 246 GGED----MWVRFFD 256
GG D +W FD
Sbjct: 289 GGSDEQVMVWKSNFD 303
Score = 151 (58.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 57/209 (27%), Positives = 86/209 (41%)
Query: 97 HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
H H+ V FS +T L +G M+ L I+ + +P + +V V + S
Sbjct: 14 HFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM-KPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 157 DQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-DGSTVKFW 213
+ S D VR+W +V+ V T + V S DG+ + TA D TVK W
Sbjct: 73 GHLLASGSRDKT-VRIWVPNVKGESTVFRAHTAT-VRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 214 DANH----FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
+ F L + N + A P G V+ +D V+ +D T E +
Sbjct: 131 STHRQRFLFSLTQHINW---VRCAKFSPD-GRLIVSASDDKTVKLWD-KTSRECIHSYCE 185
Query: 270 HGP-VHCVRFSPGGESYASGSEDGTIRIW 297
HG V V F P G A+ D T+++W
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 135 (52.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 47/216 (21%), Positives = 89/216 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
DG L++AS D + + + ++ + H V + SAS D + K+WD
Sbjct: 114 DGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 90 ALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV 148
+ + +HS+ EH V F + GM+ ++++D R + +V
Sbjct: 174 KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDA-RTHRLLQHYQLHSAAV 232
Query: 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADG 207
+++ H L T + +++ D+ G ++ TL + P T+ S+ G Y +
Sbjct: 233 NALSF-HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGS 291
Query: 208 ST-VKFWDANH----FGLVKSYNMPCTIESASLEPK 238
V W +N +G +K+ P S+ PK
Sbjct: 292 DEQVMVWKSNFDIVDYGDMKARRPPPLTSSSGTLPK 327
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 226 (84.6 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 81/296 (27%), Positives = 137/296 (46%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ + + +S DG L SAS D + +L + I +EGH + +++
Sbjct: 41 GHTAAISCVKFSN---DGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 74 LRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
SAS D + ++WDA + + L H + V +F+ ++L+++G ++ +RI+++
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPV 190
R + + +V + I+S D G ++WD + G ++TL + KSP
Sbjct: 158 KTGKCV-RMIKAHSMPISSVHFNRDGSLIVSASHD-GSCKIWDAKEGTCLKTLIDDKSPA 215
Query: 191 TS-AEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY----NMPCTIESASLEPKYGNKFV 244
S A+ S +G++I A ST+K + +K Y N I SA G V
Sbjct: 216 VSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSA-FSVTNGKYIV 274
Query: 245 AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSP-GGESYASGSE-DGTIRIWQ 298
+G ED V +D N + +GH V V P E +SG+ D TIRIW+
Sbjct: 275 SGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 70/252 (27%), Positives = 116/252 (46%)
Query: 56 TFEGHKGAVWSCCLDTN-ALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSED 113
T EGH A+ SC +N ASAS D + +W A ++H +E H + ++S D
Sbjct: 38 TLEGHTAAI-SCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 114 THLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
+H + + LRI+D P + + V V + I+S D +R+W
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDET-IRIW 155
Query: 174 DVRSGEIVQTLETKS-PVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSY--NMPC 228
+V++G+ V+ ++ S P++S ++DG I +A DGS K WDA +K+ +
Sbjct: 156 EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSC-KIWDAKEGTCLKTLIDDKSP 214
Query: 229 TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR--FS-PGGESY 285
+ A P G + D ++ ++ TG + GH V C+ FS G+
Sbjct: 215 AVSFAKFSPN-GKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYI 273
Query: 286 ASGSEDGTIRIW 297
SGSED + +W
Sbjct: 274 VSGSEDNCVYLW 285
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 227 (85.0 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 82/307 (26%), Positives = 137/307 (44%)
Query: 6 IAVPLV-CHGHSRPVVDLFYSPITPDGFFLISASKDSSPML--RNGETGDWIGTFEGHKG 62
+ PL+ GHS ++F + G ++ S S D S +L NG+ ++ G GH+G
Sbjct: 49 LQAPLMELSGHSG---EIFCAKFNSAGQYIASGSMDRSILLWRANGDCENY-GILSGHRG 104
Query: 63 AVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE-DTHLLLTG 120
A+ ++ SASAD WD TG+ + + H+ ++ + S+ +L +G
Sbjct: 105 AILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSG 164
Query: 121 GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI 180
+ + I+D + A + S V VA + I S D +++WDVR +
Sbjct: 165 SDDGTIGIWDPRKKHAA--DYIESDFPVTAVAISEAGNEIYSGGID-NDIKVWDVRKKAV 221
Query: 181 VQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGL----VKSYN-MPCTIESA 233
V + + +T+ +VS D + + + A ST + WD F +++++ P IE
Sbjct: 222 VYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKN 281
Query: 234 SLE---PKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYA-SGS 289
+ K G + G D V + TG GH V+CV FSPG E SGS
Sbjct: 282 LVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGS 341
Query: 290 EDGTIRI 296
D T+ +
Sbjct: 342 SDKTLLV 348
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 63/262 (24%), Positives = 109/262 (41%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHS---FEHKHIVRACSFSEDTH 115
GH G ++ ++ AS S D S +W A GD + H+ + +S D+
Sbjct: 58 GHSGEIFCAKFNSAGQYIASGSMDRSILLWRA-NGDCENYGILSGHRGAILDLQWSRDSD 116
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
++ + + L +DL + R V + ++ + IL + +D G + +WD
Sbjct: 117 IIFSASADMHLASWDLTTGERIRRYVGHEE-VINSLDISKRGEEILFSGSDDGTIGIWDP 175
Query: 176 RSGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPC---TIE 231
R +E+ PVT+ +S+ G I + + +K WD +V YNM TI
Sbjct: 176 RKKHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVV--YNMAGHRDTIT 233
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFH----TGNEIACNKGHHGPV--HCVR--FSPGGE 283
+ + P ++ D R +D T I G + + VR + G+
Sbjct: 234 TLKVSPD-SQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWDKEGK 292
Query: 284 SYASGSEDGTIRIW--QTGPVT 303
A G+ DGT+ IW +TG +T
Sbjct: 293 RVAMGAADGTVVIWSNETGKLT 314
Score = 144 (55.7 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 46/219 (21%), Positives = 89/219 (40%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H + F+ + +G M++ + ++ N + G++ + W I
Sbjct: 59 HSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQWSRDSDII 118
Query: 161 LSTCTDMGGVRLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYI--TTADGSTVKFWDAN- 216
S DM + WD+ +GE ++ + + + S ++S+ G I + +D T+ WD
Sbjct: 119 FSASADMH-LASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRK 177
Query: 217 -HFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC 275
H + P T + S + GN+ +GG D ++ +D + GH +
Sbjct: 178 KHAADYIESDFPVTAVAIS---EAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITT 234
Query: 276 VRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANG 314
++ SP +S S + D T R W P + T +G
Sbjct: 235 LKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDG 273
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 229 (85.7 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 77/290 (26%), Positives = 120/290 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + + +S T L S S DS M+ + + F GHK AV +
Sbjct: 17 GHRDAITSVDFSLNTKQ---LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSG 73
Query: 74 LRAASASADFSAKVW-DALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
AS S D + ++W + G+ H VR+ F D L+T +K ++++ +
Sbjct: 74 HLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVT 191
R + + VR + + I+S D V+LWD S E V + E VT
Sbjct: 134 RQKFL-FSLSQHINWVRCARFSPDGRLIVSASDDKT-VKLWDKTSRECVHSYCEHGGFVT 191
Query: 192 SAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGED 249
+ G I A +TVK WD L++ Y + + + S P GN + D
Sbjct: 192 YVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS-GNYLLTASSD 250
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ D G + GH GP V FS GE +ASG D + +W++
Sbjct: 251 STLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 207 (77.9 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 70/245 (28%), Positives = 105/245 (42%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GH+ A+ S N + AS S D VW + F HK V +FS H
Sbjct: 15 FKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGH 74
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRS-PGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
LL +G +K +RI+ N V R+ +VR+V + Q+++ T +D V++W
Sbjct: 75 LLASGSRDKTVRIWIPNVKGEST--VFRAHTATVRSVHFCSDGQSLV-TASDDKTVKVWS 131
Query: 175 VRSGEIVQTLETK-SPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSY-NMPCTIE 231
+ + +L + V A S DGR I +A D TVK WD V SY +
Sbjct: 132 THRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
P G A D V+ +D T + + H V+ + F P G + S D
Sbjct: 192 YVDFHPS-GTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSD 250
Query: 292 GTIRI 296
T++I
Sbjct: 251 STLKI 255
Score = 174 (66.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 88/352 (25%), Positives = 139/352 (39%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSC--CLDT 71
GH V + +SP G L S S+D + + F H V S C D
Sbjct: 59 GHKDAVTCVNFSP---SGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 72 NALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
+L +AS D + KVW L S +H + VR FS D L+++ +K ++++D
Sbjct: 116 QSL--VTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
+ + G T H T ++ + V++WDVR+ ++Q + S
Sbjct: 174 KTSRECVHSYCEH--GGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 191 TSA-EVSQDGRYITTADG-STVKFWDANHFGLVKS---YNMPCTIESASLEPKYGNKFVA 245
+A G Y+ TA ST+K D L+ + + P T + S + G F +
Sbjct: 232 VNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS---RTGEYFAS 288
Query: 246 GGED----MWVRFFDFHTGNEIACNKGHHGPVHC--------VRFS--PGGESYASGSED 291
GG D +W FD E+ K H P V F PGG G
Sbjct: 289 GGSDEQVMVWKSNFDVVDYREVI--KVHRPPAPLATSGNLPEVDFPVPPGG-----GRSQ 341
Query: 292 GTIRIWQTGPVTNDDTETLTANGTIGKVKVTADEVSRKIEGFHIADEGKMKE 343
+++ P++ T T T +G++ V VS +E E K+K+
Sbjct: 342 ESVQSQLQEPISMPQTLTSTLEHIVGQLDVLTQTVSI-LEQRLTLTEDKLKQ 392
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 54/206 (26%), Positives = 87/206 (42%)
Query: 97 HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
H H+ + + FS +T L +G M+ L ++ + +P + +V V + S
Sbjct: 14 HFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHM-KPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 157 DQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-DGSTVKFW 213
+ S D VR+W +V+ V T + V S DG+ + TA D TVK W
Sbjct: 73 GHLLASGSRDKT-VRIWIPNVKGESTVFRAHTAT-VRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 214 DANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP 272
+ + S + + A P G V+ +D V+ +D T E + HG
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPD-GRLIVSASDDKTVKLWD-KTSRECVHSYCEHGG 188
Query: 273 -VHCVRFSPGGESYASGSEDGTIRIW 297
V V F P G A+ S D T+++W
Sbjct: 189 FVTYVDFHPSGTCIAAASMDNTVKVW 214
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 229 (85.7 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 84/315 (26%), Positives = 136/315 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS + + +SP DG L S S D++ L + +G T EGH +V S N
Sbjct: 39 GHSDWIETVTFSP---DGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
AS S+D + K+W++ + + H+ E H V + +FS + L I L
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPA-------IGSLK 148
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
++ V +VA+ Q + S + ++LWD + + TL S V
Sbjct: 149 HT------IEGHSDWVLSVAFSPDGQLLASGSAEKT-IKLWDSATCGLKHTLGGHSNWVL 201
Query: 192 SAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGED 249
S DGR + + ++ +T+K WD L + IES + P G +G D
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPN-GQLLASGSSD 260
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTET 309
++ +D TG+ KGH V V FSP + SGS D TI++W P T +
Sbjct: 261 ATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD--PATGILKHS 318
Query: 310 LTANGTIGKVKVTAD 324
+ G + ++ + +
Sbjct: 319 MRTPGIVRSIEFSIE 333
Score = 216 (81.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 66/253 (26%), Positives = 115/253 (45%)
Query: 51 GDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACS 109
G + T EGH + + + AS S D + K+WD +G + + E H V++ +
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 110 FSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGG 169
FS + LL +G + +++++ + D+ ++ G HSD+ + S G
Sbjct: 91 FSPNGQLLASGSSDTTIKLWN-SASDSLKHTME---G--------HSDR-VESVAFSPNG 137
Query: 170 VRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMP 227
+LW+ G + T+E S V S S DG+ + + T+K WD+ GL +
Sbjct: 138 -QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGH 196
Query: 228 CT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYA 286
+ P G +G D ++ +D +G+ +GH + + FSP G+ A
Sbjct: 197 SNWVLPLVFSPD-GRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLA 255
Query: 287 SGSEDGTIRIWQT 299
SGS D TI++W T
Sbjct: 256 SGSSDATIKLWDT 268
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 36/106 (33%), Positives = 52/106 (49%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS + L +SP +G L S S D++ L + TG + T +GH V S ++
Sbjct: 237 GHSNKIESLAFSP---NGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDS 293
Query: 74 LRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLT 119
S S D + K+WD TG + HS IVR+ FS + L+T
Sbjct: 294 QLLESGSGDNTIKLWDPATGILKHSMRTPGIVRSIEFSIELPQLIT 339
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 230 (86.0 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 77/290 (26%), Positives = 121/290 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + +SP + +AS D+ ML + + + GHK V S
Sbjct: 16 GHKAAITSADFSPNCKQ---IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASAS D + ++W F+ H VR+ FS D LL+T +K ++++ +
Sbjct: 73 NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMF 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
R + R VR A D ++ +C++ +++WD + + V +
Sbjct: 133 RQRFL-YSLYRHTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190
Query: 193 -AEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGED 249
+ + +G I +A VK WD L++ Y + C + S P GN V D
Sbjct: 191 FVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHP-LGNSLVTASSD 249
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
V+ D G I +GH GPV V FS GE SG D + IW+T
Sbjct: 250 GTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRT 299
Score = 208 (78.3 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 60/245 (24%), Positives = 112/245 (45%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDT 114
+F+GHK A+ S N + A+AS D +W + + HK +V + FS
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
+LL + ++ +R++ L+R E VR+V + +D +L T ++ +++W
Sbjct: 73 NLLASASRDRTVRLWVLDRK-GKSSEFKAHTAPVRSVDF-SADGQLLVTASEDKSIKVWS 130
Query: 175 VRSGEIVQTLETKSP-VTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIES 232
+ + +L + V A+ S DGR I + ++ T+K WD + V +++ +
Sbjct: 131 MFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190
Query: 233 -ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
P G + G D V+ +D + + H V+C+ F P G S + S D
Sbjct: 191 FVDFNPN-GTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSD 249
Query: 292 GTIRI 296
GT+++
Sbjct: 250 GTVKM 254
>UNIPROTKB|E1C6T8 [details] [associations]
symbol:EIF3I "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006413 KO:K03246 CTD:8668
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:AADN02043770
IPI:IPI00580489 RefSeq:NP_001157867.1 UniGene:Gga.7902
ProteinModelPortal:E1C6T8 PRIDE:E1C6T8 Ensembl:ENSGALT00000005281
GeneID:419653 KEGG:gga:419653 NextBio:20822680 Uniprot:E1C6T8
Length = 325
Score = 222 (83.2 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 60/253 (23%), Positives = 114/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYNGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 ADWDTRHVLTGSADNSCRLWDCETGKQLALVKTSSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P ++ S + + W + I++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIENNEPYMKIPCSDSKITSAVWGPLGEFIIAG-HESGELNQFSAKSG 178
Query: 179 EIVQTL-ETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E + + E + + S+D +IT + +T K +D +K++ + SA+L
Sbjct: 179 EQLSNIKEHTKQINDIQTSRDMTMFITASKDNTAKLFDCTTLEHLKTFRTERPVNSAALS 238
Query: 237 PKYGNKFVAGGED 249
P + + + GG++
Sbjct: 239 PIFDHVVLGGGQE 251
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEV 195
P ++ S + + W + I++ + G + + +SGE + + E + +
Sbjct: 138 PYMKIPCSDSKITSAVWGPLGEFIIAG-HESGELNQFSAKSGEQLSNIKEHTKQINDIQT 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D +IT + +T K +D +K++ + SA+L P + + + GG++
Sbjct: 197 SRDMTMFITASKDNTAKLFDCTTLEHLKTFRTERPVNSAALSPIFDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>UNIPROTKB|B5FZ19 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:59729 "Taeniopygia guttata" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 CTD:8668
HOVERGEN:HBG000900 OrthoDB:EOG4HX519 EMBL:DQ214273 EMBL:DQ214274
EMBL:DQ214277 EMBL:DQ214278 EMBL:DQ214279 EMBL:DQ214280
RefSeq:NP_001157823.1 UniGene:Tgu.2619 ProteinModelPortal:B5FZ19
STRING:B5FZ19 PRIDE:B5FZ19 GeneID:100190672 KEGG:tgu:100190672
Uniprot:B5FZ19
Length = 325
Score = 222 (83.2 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 60/253 (23%), Positives = 114/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYNGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 ADWDTRHVLTGSADNSCRLWDCETGKQLALVKTSSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P ++ S + + W + I++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIENNEPYMKIPCSDSKITSAVWGPLGEFIIAG-HENGELNQFSAKSG 178
Query: 179 EIVQTL-ETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E + + E + + S+D +IT + +T K +D +K++ + SA+L
Sbjct: 179 EQLSNIKEHTKQINDIQTSRDMTMFITASKDNTAKLFDCTSLKHLKTFRTERPVNSAALS 238
Query: 237 PKYGNKFVAGGED 249
P + + + GG++
Sbjct: 239 PIFDHVVLGGGQE 251
Score = 164 (62.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEV 195
P ++ S + + W + I++ + G + + +SGE + + E + +
Sbjct: 138 PYMKIPCSDSKITSAVWGPLGEFIIAG-HENGELNQFSAKSGEQLSNIKEHTKQINDIQT 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S+D +IT + +T K +D +K++ + SA+L P + + + GG++
Sbjct: 197 SRDMTMFITASKDNTAKLFDCTSLKHLKTFRTERPVNSAALSPIFDHVVLGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 227 (85.0 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 78/290 (26%), Positives = 119/290 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + +S T L S S DS M+ + + F GHK AV +
Sbjct: 17 GHRDAVTSVDFSLNTKQ---LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSG 73
Query: 74 LRAASASADFSAKVW-DALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
AS S D + ++W + G+ H VR+ F D +T +K ++++ +
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTH 133
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVT 191
R + + VR + + I+S D V+LWD S E V + E VT
Sbjct: 134 RQKFL-FSLSQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKTSRECVHSYCEHGGFVT 191
Query: 192 SAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGED 249
+ G I A +TVK WD L++ Y + + + S P GN V D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPS-GNYLVTASSD 250
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ D G + GH GP V FS GE +ASG D + +W++
Sbjct: 251 STLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 213 (80.0 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 72/245 (29%), Positives = 106/245 (43%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GH+ AV S N + AS S D VW + F HK V +FS H
Sbjct: 15 FKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGH 74
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRS-PGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
LL +G +K +RI+ N V R+ +VR+V + Q+ + T +D V++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGEST--VFRAHTATVRSVHFCSDGQSFV-TASDDKTVKVWS 131
Query: 175 VRSGEIVQTLETK-SPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSY-NMPCTIE 231
+ + +L + V A+ S DGR I +A D TVK WD V SY +
Sbjct: 132 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 191
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
P G A G D V+ +D T + + H V+ + F P G + S D
Sbjct: 192 YVDFHPS-GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 250
Query: 292 GTIRI 296
T++I
Sbjct: 251 STLKI 255
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 53/206 (25%), Positives = 86/206 (41%)
Query: 97 HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
H H+ V + FS +T L +G M+ L ++ + +P +V V + S
Sbjct: 14 HFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHM-KPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 157 DQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDGR-YITTADGSTVKFW 213
+ S D VR+W +V+ V T + V S DG+ ++T +D TVK W
Sbjct: 73 GHLLASGSRDKT-VRIWVPNVKGESTVFRAHTAT-VRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 214 DANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP 272
+ + S + + A P G V+ +D V+ +D T E + HG
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLWD-KTSRECVHSYCEHGG 188
Query: 273 -VHCVRFSPGGESYASGSEDGTIRIW 297
V V F P G A+ D T+++W
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVW 214
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 225 (84.3 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 72/270 (26%), Positives = 112/270 (41%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW-DALT 92
L S S DS M+ + + F GHK AV + AS S D + ++W +
Sbjct: 65 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIK 124
Query: 93 GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
G+ H VR+ F D +T +K ++++ +R + + VR
Sbjct: 125 GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFL-FSLSQHINWVRCAK 183
Query: 153 WLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYITTAD-GSTV 210
+ + I+S D V+LWD S E V + E VT + G + A +TV
Sbjct: 184 FSPDGRLIVSASDDKT-VKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTV 242
Query: 211 KFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
K WD L++ Y + + + S P GN V D ++ D G + GH
Sbjct: 243 KVWDVRTHRLLQHYQLHSAAVNALSFHPS-GNYLVTASSDSTLKILDLMEGRLLYTLHGH 301
Query: 270 HGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
GP V FS GE +ASG D + +W++
Sbjct: 302 QGPATTVAFSRTGEYFASGGSDEQVMVWKS 331
Score = 205 (77.2 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 70/245 (28%), Positives = 105/245 (42%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GH+ AV N + AS S D VW + F HK V +FS H
Sbjct: 46 FKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 105
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRS-PGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
LL +G +K +RI+ N V R+ +VR+V + Q+ + T +D +++W
Sbjct: 106 LLASGSRDKTVRIWVPNIKGEST--VFRAHTATVRSVHFCSDGQSFV-TASDDKTIKVWS 162
Query: 175 VRSGEIVQTLETK-SPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSY-NMPCTIE 231
+ + +L + V A+ S DGR I +A D TVK WD V SY +
Sbjct: 163 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVT 222
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
P G A G D V+ +D T + + H V+ + F P G + S D
Sbjct: 223 YVDFHPS-GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSD 281
Query: 292 GTIRI 296
T++I
Sbjct: 282 STLKI 286
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/253 (24%), Positives = 102/253 (40%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + +SP G L S S+D + + F H V S ++
Sbjct: 90 GHKDAVTCVNFSP---SGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDG 146
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+AS D + KVW L S +H + VR FS D L+++ +K ++++D
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT 206
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
+ + G T H T ++ V++WDVR+ ++Q + S +
Sbjct: 207 SRECVHSYCEH--GGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 264
Query: 193 A-EVSQDGRYITTADG-STVKFWDANHFGLVKS---YNMPCTIESASLEPKYGNKFVAGG 247
A G Y+ TA ST+K D L+ + + P T + S + G F +GG
Sbjct: 265 ALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS---RTGEYFASGG 321
Query: 248 ED----MWVRFFD 256
D +W FD
Sbjct: 322 SDEQVMVWKSNFD 334
Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 50/206 (24%), Positives = 85/206 (41%)
Query: 97 HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
H H+ V FS + L +G M+ L ++ + +P + +V V + S
Sbjct: 45 HFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHM-KPQSRAYRFTGHKDAVTCVNFSPS 103
Query: 157 DQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDGR-YITTADGSTVKFW 213
+ S D VR+W +++ V T + V S DG+ ++T +D T+K W
Sbjct: 104 GHLLASGSRDKT-VRIWVPNIKGESTVFRAHTAT-VRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 214 DANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP 272
+ + S + + A P G V+ +D V+ +D T E + HG
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLWD-KTSRECVHSYCEHGG 219
Query: 273 -VHCVRFSPGGESYASGSEDGTIRIW 297
V V F P G A+ D T+++W
Sbjct: 220 FVTYVDFHPSGTCVAAAGMDNTVKVW 245
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/213 (21%), Positives = 90/213 (42%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
DG ++AS D + + + ++ + H V + SAS D + K+WD
Sbjct: 145 DGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Query: 90 ALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV 148
+ + +HS+ EH V F + GM+ ++++D+ R + +V
Sbjct: 205 KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV-RTHRLLQHYQLHSAAV 263
Query: 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADG 207
+++ H L T + +++ D+ G ++ TL + P T+ S+ G Y +
Sbjct: 264 NALSF-HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGS 322
Query: 208 ST-VKFWDANH----FG-LVKSYNMPCTIESAS 234
V W +N +G +++ P T+ S+S
Sbjct: 323 DEQVMVWKSNFDVIDYGEVLRVQRPPATLASSS 355
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
+PDG ++SAS D + L + + + + ++ H G V + A+A D + KV
Sbjct: 185 SPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKV 244
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG 146
WD T +L ++ H V A SF + L+T + L+I DL + G
Sbjct: 245 WDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLL-YTLHGHQG 303
Query: 147 SVRTVAWLHSDQTILSTCTDMGGVRLW----DVRS-GEIVQTLETKSPVTSAEVS 196
TVA+ + + S +D V +W DV GE+++ + P T A S
Sbjct: 304 PATTVAFSRTGEYFASGGSDEQ-VMVWKSNFDVIDYGEVLRV--QRPPATLASSS 355
>GENEDB_PFALCIPARUM|MAL7P1.81 [details] [associations]
symbol:MAL7P1.81 "eukaryotictranslation
initiation factor 3 37.28 kDa subunit, putative" species:5833
"Plasmodium falciparum" [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006446 GO:GO:0003743
EMBL:AL844506 GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246
OMA:ATVAGWS RefSeq:XP_001349071.1 ProteinModelPortal:Q8IBT2
IntAct:Q8IBT2 MINT:MINT-1587139 EnsemblProtists:MAL7P1.81:mRNA
GeneID:2655045 KEGG:pfa:MAL7P1.81 EuPathDB:PlasmoDB:PF3D7_0716800
ProtClustDB:CLSZ2432323 Uniprot:Q8IBT2
Length = 327
Score = 153 (58.9 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 56/241 (23%), Positives = 106/241 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+RP L + DG L + +D +L G IG +E GAV++ + ++
Sbjct: 8 GHNRP---LTHVNTNYDGDLLFTTGRDKKFILWRVSDGTQIGLYEC-SGAVYNSDVTYDS 63
Query: 74 LRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSED---------THLLLTGGMEK 124
R +SA ++D TG+ L E VR F++D H L ++
Sbjct: 64 KRIVCSSAANKVYLFDVYTGEPLKIIEENGPVRFVEFNKDPLNQDKIVVAHDRLKSDHKR 123
Query: 125 ILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL 184
++++DL + ++ D ++ V W D+ ILS + G + +W+ G +++
Sbjct: 124 SIKLYDLKSDNLIWKQ-DHESRCIQ-VRWCFFDKLILSA-HENGEIVVWNAEDGHLIRKF 180
Query: 185 ETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGN 241
+ S VT+ +D + ++ DG T K D +F ++ Y + + + P + N
Sbjct: 181 QAHSKEVTNLSFDKDRMLMLSSSLDG-TAKLRDGVNFEIINEYKTDRPLNTCDISPLFKN 239
Query: 242 K 242
+
Sbjct: 240 E 240
Score = 118 (46.6 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 245 AGGEDMW-VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
A GE + +D NE+ KGH GPVH ++F P G+ + SG EDG RI+
Sbjct: 262 ASGEGKFQTLLYDIIHSNELGSIKGHFGPVHSIKFLPHGDGFVSGGEDGFARIY 315
Score = 87 (35.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++SA ++ ++ N E G I F+ H V + D + + S+S D +AK+ D +
Sbjct: 157 ILSAHENGEIVVWNAEDGHLIRKFQAHSKEVTNLSFDKDRMLMLSSSLDGTAKLRDGVNF 216
Query: 94 DVLHSFEHKHIVRACSFS-----EDT---HLLLTGG 121
++++ ++ + C S E+ H++L GG
Sbjct: 217 EIINEYKTDRPLNTCDISPLFKNENNPKNHIILAGG 252
Score = 67 (28.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 197 QDGRYITTADGSTVKF----WD---ANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGED 249
Q ++TT KF +D +N G +K + P + S P +G+ FV+GGED
Sbjct: 253 QAAEHVTTTASGEGKFQTLLYDIIHSNELGSIKGHFGP--VHSIKFLP-HGDGFVSGGED 309
Query: 250 MWVRFFDF 257
+ R + F
Sbjct: 310 GFARIYHF 317
>UNIPROTKB|Q8IBT2 [details] [associations]
symbol:MAL7P1.81 "Eukaryotic translation initiation factor
3 37.28 kDa subunit, putative" species:36329 "Plasmodium falciparum
3D7" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISS] [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006446 GO:GO:0003743 EMBL:AL844506
GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246 OMA:ATVAGWS
RefSeq:XP_001349071.1 ProteinModelPortal:Q8IBT2 IntAct:Q8IBT2
MINT:MINT-1587139 EnsemblProtists:MAL7P1.81:mRNA GeneID:2655045
KEGG:pfa:MAL7P1.81 EuPathDB:PlasmoDB:PF3D7_0716800
ProtClustDB:CLSZ2432323 Uniprot:Q8IBT2
Length = 327
Score = 153 (58.9 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 56/241 (23%), Positives = 106/241 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+RP L + DG L + +D +L G IG +E GAV++ + ++
Sbjct: 8 GHNRP---LTHVNTNYDGDLLFTTGRDKKFILWRVSDGTQIGLYEC-SGAVYNSDVTYDS 63
Query: 74 LRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSED---------THLLLTGGMEK 124
R +SA ++D TG+ L E VR F++D H L ++
Sbjct: 64 KRIVCSSAANKVYLFDVYTGEPLKIIEENGPVRFVEFNKDPLNQDKIVVAHDRLKSDHKR 123
Query: 125 ILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL 184
++++DL + ++ D ++ V W D+ ILS + G + +W+ G +++
Sbjct: 124 SIKLYDLKSDNLIWKQ-DHESRCIQ-VRWCFFDKLILSA-HENGEIVVWNAEDGHLIRKF 180
Query: 185 ETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGN 241
+ S VT+ +D + ++ DG T K D +F ++ Y + + + P + N
Sbjct: 181 QAHSKEVTNLSFDKDRMLMLSSSLDG-TAKLRDGVNFEIINEYKTDRPLNTCDISPLFKN 239
Query: 242 K 242
+
Sbjct: 240 E 240
Score = 118 (46.6 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 23/54 (42%), Positives = 31/54 (57%)
Query: 245 AGGEDMW-VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
A GE + +D NE+ KGH GPVH ++F P G+ + SG EDG RI+
Sbjct: 262 ASGEGKFQTLLYDIIHSNELGSIKGHFGPVHSIKFLPHGDGFVSGGEDGFARIY 315
Score = 87 (35.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++SA ++ ++ N E G I F+ H V + D + + S+S D +AK+ D +
Sbjct: 157 ILSAHENGEIVVWNAEDGHLIRKFQAHSKEVTNLSFDKDRMLMLSSSLDGTAKLRDGVNF 216
Query: 94 DVLHSFEHKHIVRACSFS-----EDT---HLLLTGG 121
++++ ++ + C S E+ H++L GG
Sbjct: 217 EIINEYKTDRPLNTCDISPLFKNENNPKNHIILAGG 252
Score = 67 (28.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 197 QDGRYITTADGSTVKF----WD---ANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGED 249
Q ++TT KF +D +N G +K + P + S P +G+ FV+GGED
Sbjct: 253 QAAEHVTTTASGEGKFQTLLYDIIHSNELGSIKGHFGP--VHSIKFLP-HGDGFVSGGED 309
Query: 250 MWVRFFDF 257
+ R + F
Sbjct: 310 GFARIYHF 317
>UNIPROTKB|Q5IH81 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9986 "Oryctolagus cuniculus" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000231322 HAMAP:MF_03008 CTD:8668 HOVERGEN:HBG000900
OrthoDB:EOG4HX519 EMBL:AY727926 RefSeq:NP_001075647.1
UniGene:Ocu.6213 ProteinModelPortal:Q5IH81 STRING:Q5IH81
PRIDE:Q5IH81 GeneID:100008959 Uniprot:Q5IH81
Length = 333
Score = 221 (82.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 60/253 (23%), Positives = 114/253 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L + +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
D + + SAD S ++WD TG L + VR C F ++++ G +
Sbjct: 60 ADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP-----DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
+ FDL P + P ++ + + + W + I++ + G + + +SG
Sbjct: 120 CFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAG-HESGELNQYSAKSG 178
Query: 179 EI-VQTLETKSPVTSAEVSQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
E+ V E + ++S++ ++T + +T K +D+ K++ E A+L
Sbjct: 179 EVLVNVKEHSRQINDIQLSREMTMFVTASKDNTAKLFDSTTLEHQKTFRTEPPRELAALS 238
Query: 237 PKYGNKFVAGGED 249
P Y + V GG++
Sbjct: 239 PNYEHVVVGGGQE 251
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 46/180 (25%), Positives = 81/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI-VQTLETKSPVTSAEV 195
P ++ + + + W + I++ + G + + +SGE+ V E + ++
Sbjct: 138 PYMKIPCNDSKITSAVWGPLGECIIAG-HESGELNQYSAKSGEVLVNVKEHSRQINDIQL 196
Query: 196 SQD-GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMW--- 251
S++ ++T + +T K +D+ K++ E A+L P Y + V GG++
Sbjct: 197 SREMTMFVTASKDNTAKLFDSTTLEHQKTFRTEPPRELAALSPNYEHVVVGGGQEAMDVT 256
Query: 252 ----------VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++ V F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>ZFIN|ZDB-GENE-040426-1922 [details] [associations]
symbol:eif3i "eukaryotic translation initiation
factor 3, subunit I" species:7955 "Danio rerio" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity"
evidence=IEA;ISS] [GO:0006413 "translational initiation"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1922 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003743 GO:GO:0005852 HOGENOM:HOG000231322 KO:K03246
HAMAP:MF_03008 CTD:8668 GeneTree:ENSGT00630000089849
HOVERGEN:HBG000900 OMA:ATVAGWS OrthoDB:EOG4HX519 EMBL:BC045995
EMBL:BC065874 IPI:IPI00505079 RefSeq:NP_998155.1 UniGene:Dr.76501
ProteinModelPortal:Q7ZV55 STRING:Q7ZV55 PRIDE:Q7ZV55
Ensembl:ENSDART00000005119 GeneID:406263 KEGG:dre:406263
InParanoid:Q7ZV55 NextBio:20817896 Bgee:Q7ZV55 Uniprot:Q7ZV55
Length = 325
Score = 220 (82.5 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 63/253 (24%), Positives = 113/253 (44%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + Y+ +G L S +KD + G+ +GT+ GH GAVW
Sbjct: 3 PILLQGHERSITQIKYNR---EGDLLFSVAKDPIANVWYSVNGERLGTYNGHTGAVWCVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-----GME 123
+D + + SAD S ++WD TG L E VR C F ++++ G +
Sbjct: 60 VDWDTKNVLTGSADNSCRLWDCETGKQLALLETSSAVRTCGFDFSGNIIMFSTDKQMGYQ 119
Query: 124 KILRIFDLNRP----DAPPR-EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
L +DL P D P V S + + W + +++ + G + + +SG
Sbjct: 120 CFLNYYDLRDPQQIEDNQPYISVPCSESKITSAVWGPLGEFVIAG-HENGEINQFSAKSG 178
Query: 179 EIVQTL-ETKSPVTSAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCTIESASLE 236
E+++ E + + S D I +A T K +D++ VK++ + SA++
Sbjct: 179 EVLKKAKEHTKQINDIQSSVDLTMIISASKDCTAKMFDSSTLEHVKTFKTERPVNSAAIS 238
Query: 237 PKYGNKFVAGGED 249
P + + GG++
Sbjct: 239 PIMDHVVMGGGQE 251
Score = 159 (61.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 49/180 (27%), Positives = 82/180 (45%)
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEV 195
P V S + + W + +++ + G + + +SGE+++ E + +
Sbjct: 138 PYISVPCSESKITSAVWGPLGEFVIAG-HENGEINQFSAKSGEVLKKAKEHTKQINDIQS 196
Query: 196 SQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGED-MWV- 252
S D I +A T K +D++ VK++ + SA++ P + + GG++ M V
Sbjct: 197 SVDLTMIISASKDCTAKMFDSSTLEHVKTFKTERPVNSAAISPIMDHVVMGGGQEAMEVT 256
Query: 253 -----------RFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
RFF E KGH GP++CV F P G+SY+SG EDG +RI P
Sbjct: 257 TTSTRIGKFEARFFHAAYEEEFGRVKGHFGPINCVAFHPDGKSYSSGGEDGYVRIHYFDP 316
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 221 (82.9 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 72/268 (26%), Positives = 122/268 (45%)
Query: 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDTHL 116
+GH +++ + + SAS D VWD LT + +H+ + V C++S +
Sbjct: 59 KGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAYSPTANF 118
Query: 117 LLTGGMEKILRIFDLNRPDAPPR---EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
+ GG++ I I++L + P R E++ G + +L+ D+ I+++ DM + LW
Sbjct: 119 VACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLN-DRQIVTSSGDMTCI-LW 176
Query: 174 DVRSG-EIVQTLETKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYN-MPCTI 230
DV +G +I + + V S VS D Y I+ A +T K WD V+++ I
Sbjct: 177 DVENGTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADI 236
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESYA 286
+ P G F G +D R FD E+ + H + C V FS G
Sbjct: 237 NAVQYFPN-GLSFGTGSDDASCRLFDIRADRELM--QYTHDNILCGITSVGFSFSGRFLF 293
Query: 287 SGSEDGTIRIWQTGPVTNDDTETLTANG 314
+G +D T +W T + + +LT +G
Sbjct: 294 AGYDDFTCNVWDT--LKGERVLSLTGHG 319
Score = 158 (60.7 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 65/304 (21%), Positives = 122/304 (40%)
Query: 5 KIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAV 64
KI V GH + + ++ D L+SAS+D ++ +G T + + V
Sbjct: 51 KIKVRRNLKGHLAKIYAMHWAE---DNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWV 107
Query: 65 WSCCLDTNALRAASASADFSAKVWDALTGD----VLHSFE-HKHIVRACSFSEDTHLLLT 119
+C A A D +++ + + V H + C F D ++ +
Sbjct: 108 MTCAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHTGYLSCCRFLNDRQIVTS 167
Query: 120 GGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE 179
G + ++D+ D + G V +V+ +S D +LWD+RSG+
Sbjct: 168 SG-DMTCILWDVENGTKITEFSDHN-GDVMSVSVSPDKNYFISGACD-ATAKLWDLRSGK 224
Query: 180 IVQTLET-KSPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLVKSY---NMPCTIESAS 234
VQT ++ + + + +G + T +D ++ + +D + Y N+ C I S
Sbjct: 225 CVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVG 284
Query: 235 LEPKYGNKFV-AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGT 293
+ +F+ AG +D +D G + GH V C+ G + +GS D
Sbjct: 285 FS--FSGRFLFAGYDDFTCNVWDTLKGERVLSLTGHGNRVSCLGVPTDGMALCTGSWDSL 342
Query: 294 IRIW 297
++IW
Sbjct: 343 LKIW 346
>WB|WBGene00001232 [details] [associations]
symbol:eif-3.I species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0006915 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0000003 GO:GO:0003743
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
GeneTree:ENSGT00630000089849 OMA:ATVAGWS EMBL:FO081786
RefSeq:NP_490988.2 ProteinModelPortal:Q965S8 SMR:Q965S8
STRING:Q965S8 PaxDb:Q965S8 EnsemblMetazoa:Y74C10AR.1 GeneID:171809
KEGG:cel:CELE_Y74C10AR.1 UCSC:Y74C10AR.1 CTD:171809
WormBase:Y74C10AR.1 InParanoid:Q965S8 NextBio:872787 Uniprot:Q965S8
Length = 327
Score = 218 (81.8 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 67/254 (26%), Positives = 116/254 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
PL GH R + + ++ +G S +KD P + E G+ IG+++GH GAVW
Sbjct: 3 PLSLKGHERALTRVRFNR---EGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDID 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLL--TGGMEKIL 126
+ + + +AS D + K+WDA G+ L++ H+ +++C FS +L+ T M K L
Sbjct: 60 VSWDTTKCVTASGDLTVKIWDAELGNCLYTINHQTPMKSCGFSYSGNLVCFTTQKMTKNL 119
Query: 127 RIFDLN--RPDAPPREVDRS----PGSVRTVAWLHSDQTILSTCT-DMGGVRLWDVRSGE 179
F + R + E S V L + L T + G ++ +D+R+ +
Sbjct: 120 STFQVRDLRDSSQMVEGGESFFYSQFDVNATTALFTQMDDLVTIGFESGLLQQYDLRNPD 179
Query: 180 I-VQTLET--KSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESASL 235
+ T E+ + V ++S G ++ +A T D N +K Y + SA +
Sbjct: 180 TPIHTNESVHRYSVQDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQYKSERPVNSACI 239
Query: 236 EPKYGNKFVAGGED 249
P + + GGED
Sbjct: 240 SPNRDHICLGGGED 253
Score = 113 (44.8 bits), Expect = 0.00079, P = 0.00079
Identities = 37/121 (30%), Positives = 54/121 (44%)
Query: 190 VTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGE 248
V ++S G ++ +A T D N +K Y + SA + P + + GGE
Sbjct: 193 VQDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQYKSERPVNSACISPNRDHICLGGGE 252
Query: 249 D-MWVR-------FFD---FHT--GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIR 295
D M V F+ +H E A KGH GP++ + + P G A+G EDG IR
Sbjct: 253 DAMQVTQTSVSAGHFEAKIYHMVFEEEFARFKGHFGPINTMAWHPSGTIIATGGEDGYIR 312
Query: 296 I 296
I
Sbjct: 313 I 313
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 221 (82.9 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 77/290 (26%), Positives = 118/290 (40%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + +S T L S S DS M+ + + F GHK AV +
Sbjct: 17 GHRDAVTCVDFSINTKQ---LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSG 73
Query: 74 LRAASASADFSAKVW-DALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
AS S D + ++W + G+ H VR+ F D +T +K ++++ +
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 133
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVT 191
R + + VR + + I+S D V+LWD S E V + E VT
Sbjct: 134 RQKFL-FSLSQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDKSSRECVHSYCEHGGFVT 191
Query: 192 SAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGED 249
+ G I A +TVK WD L++ Y + + S P GN + D
Sbjct: 192 YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPS-GNYLITASSD 250
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ D G + GH GP V FS GE +ASG D + +W++
Sbjct: 251 STLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKS 300
Score = 204 (76.9 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 71/245 (28%), Positives = 106/245 (43%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F+GH+ AV N + AS S D VW + F HK V +FS H
Sbjct: 15 FKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGH 74
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRS-PGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
LL +G +K +RI+ N V R+ +VR+V + Q+ + T +D V++W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGEST--VFRAHTATVRSVHFCSDGQSFV-TASDDKTVKVWA 131
Query: 175 VRSGEIVQTLETK-SPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSY-NMPCTIE 231
+ + +L + V A+ S DGR I +A D TVK WD + V SY +
Sbjct: 132 THRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVT 191
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
P G A G D V+ +D T + + H V+ + F P G + S D
Sbjct: 192 YVDFHPS-GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSD 250
Query: 292 GTIRI 296
T++I
Sbjct: 251 STLKI 255
Score = 159 (61.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 84/348 (24%), Positives = 135/348 (38%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + +SP G L S S+D + + F H V S ++
Sbjct: 59 GHKDAVTCVNFSP---SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+AS D + KVW L S +H + VR FS D L+++ +K ++++D +
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 175
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
+ + G T H T ++ V++WDVR+ ++Q + S V
Sbjct: 176 SRECVHSYCEH--GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 233
Query: 192 SAEVSQDGRYITTADG-STVKFWDANHFGLVKS---YNMPCTIESASLEPKYGNKFVAGG 247
G Y+ TA ST+K D L+ + + P T + S + G F +GG
Sbjct: 234 GLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS---RTGEYFASGG 290
Query: 248 ED----MWVRFFDFHTGNEI-------ACNKGHHGPVHCVRFS-PGGESYASGSEDGTIR 295
D +W FD E+ A G + V F P G G +++
Sbjct: 291 SDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGR----GRSVESVQ 346
Query: 296 IWQTGPVTNDDTETLTANGTIGKVKVTADEVSRKIEGFHIADEGKMKE 343
PV+ T T T +G++ V VS +E E K+K+
Sbjct: 347 SQPQEPVSVPQTLTSTLEHIVGQLDVLTQTVSI-LEQRLTLTEDKLKQ 393
Score = 150 (57.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 55/209 (26%), Positives = 87/209 (41%)
Query: 97 HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
H H+ V FS +T L +G M+ L ++ + +P + +V V + S
Sbjct: 14 HFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHM-KPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 157 DQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDGR-YITTADGSTVKFW 213
+ S D VR+W +V+ V T + V S DG+ ++T +D TVK W
Sbjct: 73 GHLLASGSRDKT-VRIWVPNVKGESTVFRAHTAT-VRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 214 DANH-----FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG 268
A H F L + N + A P G V+ +D V+ +D + +
Sbjct: 131 -ATHRQKFLFSLSQHINW---VRCAKFSPD-GRLIVSASDDKTVKLWDKSSRECVHSYCE 185
Query: 269 HHGPVHCVRFSPGGESYASGSEDGTIRIW 297
H G V V F P G A+ D T+++W
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 220 (82.5 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 78/298 (26%), Positives = 130/298 (43%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
V H P+ ++ + G I+ S D + L + +G+ + T EGH+ V++ +
Sbjct: 87 VLKAHILPLTNV---ALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 71 TN-ALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRI 128
+ A+ S D + K+W TG H+F H + SF+ + L+ TG M+ ++
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK- 187
+D+ + S + ++++ S I++ D V +WD +G V L
Sbjct: 204 WDIQNGEEVYTLRGHS-AEIISLSFNTSGDRIITGSFDHTVV-VWDADTGRKVNILIGHC 261
Query: 188 SPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVA 245
+ ++SA + D I T T K WDA + V + I + + Y K +A
Sbjct: 262 AEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFD--YTGKLIA 319
Query: 246 -GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW--QTG 300
D R F T IA +GH G + + F+P G +GS D T RIW QTG
Sbjct: 320 TASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTG 377
Score = 219 (82.2 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 73/291 (25%), Positives = 126/291 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + ++ P G + + S D + L + ETG TF GH + + +
Sbjct: 132 GHRNVVYAIAFN--NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
A+ S D +AK+WD G+ +++ H + + SF+ ++TG + + ++D +
Sbjct: 190 TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
Query: 133 RPDAPPREVDRSPGSVRTV--AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP- 189
R+V+ G + A + D +++ T + +LWD +G+ V TL
Sbjct: 250 TG----RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDE 305
Query: 190 VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGG 247
+ + G+ I TA DG+ F A + K I S P+ GN + G
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQ-GNHLLTGS 364
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
D R +D TG + +GH + F+ G +GS+D T RIW+
Sbjct: 365 SDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 222 (83.2 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 83/320 (25%), Positives = 145/320 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P V GH V+ G ++S S D++ + + TG + T GH G VWS
Sbjct: 253 PKVLKGHDDHVITCLQFC----GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 308
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILR 127
+ N + S S D + KVW+A TG+ +H+ + H VR E +++G + LR
Sbjct: 309 MRDNII--ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 364
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLET 186
++D+ + G V V + D + ++S D V++WD + + TL+
Sbjct: 365 VWDIETGQC----LHVLMGHVAAVRCVQYDGRRVVSGAYDFM-VKVWDPETETCLHTLQG 419
Query: 187 KSP-VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV 244
+ V S + DG ++ + T ++ WD + + ++ S +E K N V
Sbjct: 420 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-MELK-DNILV 475
Query: 245 AGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIW--QT 299
+G D V+ +D TG + +G H V C++F+ + S+DGT+++W +T
Sbjct: 476 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 533
Query: 300 GPVTNDDTETLTANGTIGKV 319
G + TL + G+ G V
Sbjct: 534 GEFIRN-LVTLESGGSGGVV 552
Score = 208 (78.3 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 75/268 (27%), Positives = 117/268 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+IS S D + + N ETG+ I T GH V C+ + R S S D + +VWD TG
Sbjct: 314 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 371
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
LH H VR + D +++G + +++++D P+ + G V
Sbjct: 372 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETC-LHTLQGHTNRVY 425
Query: 153 WLHSDQT-ILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVK 211
L D ++S D +R+WDV +G + TL +TS +D ++ STVK
Sbjct: 426 SLQFDGIHVVSGSLDTS-IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 484
Query: 212 FWDANHFGLVKSYNMPCTIESASLEPKYGNKFV-AGGEDMWVRFFDFHTG----NEIACN 266
WD +++ P +SA ++ FV +D V+ +D TG N +
Sbjct: 485 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 544
Query: 267 KGHHGPVHC-VRFSPGGESYASGSEDGT 293
G G V +R S A GS +GT
Sbjct: 545 SGGSGGVVWRIRASNTKLVCAVGSRNGT 572
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 225 (84.3 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 61/176 (34%), Positives = 89/176 (50%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
L S S D + L + TG T EGH G V S + AS S D + ++WD TG
Sbjct: 710 LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATG 769
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
+ + H + VR+ +FS D LL +G +K +R++D + + + +VR+VA
Sbjct: 770 SLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWD-PATGSLQQTLRGHSDTVRSVA 828
Query: 153 WLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGS 208
+ + + S D VRLWD +G + QTL K VT + SQDG YI+T GS
Sbjct: 829 FSPDGRLLASGSFDKT-VRLWDPATGTLQQTLIIKGTVTELQFSQDGSYISTNLGS 883
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 72/251 (28%), Positives = 118/251 (47%)
Query: 89 DALTGDVLHSFEHKHIVRACSFSEDTHL-LLTGGM-----EKILRI-FDLNRPD---APP 138
D+L D LH + + +++ C +++ L + G+ ++R F + P P
Sbjct: 628 DSLLADFLHDAK-RFVLKNCQVADEAPLQIYCAGLVFAPQTALIRSNFSEDLPSWICQLP 686
Query: 139 REVDRSPGSVRTVAWLHSDQT--ILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEV 195
+ ++ ++T+ HS+ +L++ +D VRLWD +G + QTLE S V S
Sbjct: 687 KVNEKWGAELQTLEG-HSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAF 745
Query: 196 SQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVR 253
S DGR + + TV+ WD L ++ + S + P G +G D VR
Sbjct: 746 SPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPD-GRLLASGSFDKTVR 804
Query: 254 FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
+D TG+ +GH V V FSP G ASGS D T+R+W P T +TL
Sbjct: 805 LWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD--PATGTLQQTLIIK 862
Query: 314 GTIGKVKVTAD 324
GT+ +++ + D
Sbjct: 863 GTVTELQFSQD 873
Score = 180 (68.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 55/172 (31%), Positives = 83/172 (48%)
Query: 47 NGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIV 105
N + G + T EGH +VW+ AS S D + ++WD TG + + E H V
Sbjct: 689 NEKWGAELQTLEGHSNSVWAVL--------ASGSDDETVRLWDPATGSLQQTLEGHSGWV 740
Query: 106 RACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGS-VRTVAWLHSDQTILSTC 164
+ +FS D LL +G +K +R++D ++ R + VR+VA+ + + S
Sbjct: 741 LSVAFSPDGRLLASGSFDKTVRLWD--PATGSLQQTLRGHSNWVRSVAFSPDGRLLASGS 798
Query: 165 TDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWD 214
D VRLWD +G + QTL S V S S DGR + + TV+ WD
Sbjct: 799 FDKT-VRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V+ + +SP DG L S S D + L + TG T GH V S +
Sbjct: 735 GHSGWVLSVAFSP---DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDG 791
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
AS S D + ++WD TG + + H VR+ +FS D LL +G +K +R++D
Sbjct: 792 RLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 219 (82.2 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 66/247 (26%), Positives = 106/247 (42%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
+ GHK V S + ASAS D + ++W F+ H VR+ FS D
Sbjct: 14 YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQ 73
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
L T +K ++++ + R + R VR A D ++ +C++ +++WD
Sbjct: 74 FLATASEDKSIKVWSMYRQRFL-YSLYRHTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDT 131
Query: 176 RSGEIVQTLETKSPVTS-AEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCT-IES 232
+ + V + + + G I +A TVK WD L++ Y + +
Sbjct: 132 TNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNC 191
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
S P GN + D ++ D G I +GH GPV V FS GGE +ASG D
Sbjct: 192 ISFHPS-GNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADT 250
Query: 293 TIRIWQT 299
+ +W+T
Sbjct: 251 QVLLWRT 257
Score = 187 (70.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 75/254 (29%), Positives = 107/254 (42%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + +SP G L SAS+D + L + F+ H V S +
Sbjct: 16 GHKDVVTSVQFSP---HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADG 72
Query: 74 LRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
A+AS D S KVW L+S + H H VR FS D L+++ +K ++I+D
Sbjct: 73 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
D S G V + S I S +D V++WDVR +++Q + S V
Sbjct: 133 NKQCVNNFSD-SVGFANFVDFNPSGTCIASAGSDQT-VKVWDVRVNKLLQHYQVHSGGVN 190
Query: 192 SAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSYNMPCTIESASLEPKYGNKFVAG 246
G Y+ TA DG T+K D L+ + + P S S K G F +G
Sbjct: 191 CISFHPSGNYLITASSDG-TLKILDLLEGRLIYTLQGHTGPVFTVSFS---KGGELFASG 246
Query: 247 GED----MWVRFFD 256
G D +W FD
Sbjct: 247 GADTQVLLWRTNFD 260
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 222 (83.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 83/320 (25%), Positives = 145/320 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P V GH V+ G ++S S D++ + + TG + T GH G VWS
Sbjct: 293 PKVLKGHDDHVITCLQFC----GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 348
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILR 127
+ N + S S D + KVW+A TG+ +H+ + H VR E +++G + LR
Sbjct: 349 MRDNII--ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 404
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLET 186
++D+ + G V V + D + ++S D V++WD + + TL+
Sbjct: 405 VWDIETGQC----LHVLMGHVAAVRCVQYDGRRVVSGAYDFM-VKVWDPETETCLHTLQG 459
Query: 187 KSP-VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV 244
+ V S + DG ++ + T ++ WD + + ++ S +E K N V
Sbjct: 460 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-MELK-DNILV 515
Query: 245 AGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIW--QT 299
+G D V+ +D TG + +G H V C++F+ + S+DGT+++W +T
Sbjct: 516 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 573
Query: 300 GPVTNDDTETLTANGTIGKV 319
G + TL + G+ G V
Sbjct: 574 GEFIRN-LVTLESGGSGGVV 592
Score = 208 (78.3 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 75/268 (27%), Positives = 117/268 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+IS S D + + N ETG+ I T GH V C+ + R S S D + +VWD TG
Sbjct: 354 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 411
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
LH H VR + D +++G + +++++D P+ + G V
Sbjct: 412 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETC-LHTLQGHTNRVY 465
Query: 153 WLHSDQT-ILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVK 211
L D ++S D +R+WDV +G + TL +TS +D ++ STVK
Sbjct: 466 SLQFDGIHVVSGSLDTS-IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 524
Query: 212 FWDANHFGLVKSYNMPCTIESASLEPKYGNKFV-AGGEDMWVRFFDFHTG----NEIACN 266
WD +++ P +SA ++ FV +D V+ +D TG N +
Sbjct: 525 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 584
Query: 267 KGHHGPVHC-VRFSPGGESYASGSEDGT 293
G G V +R S A GS +GT
Sbjct: 585 SGGSGGVVWRIRASNTKLVCAVGSRNGT 612
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 222 (83.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 83/320 (25%), Positives = 145/320 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P V GH V+ G ++S S D++ + + TG + T GH G VWS
Sbjct: 295 PKVLKGHDDHVITCLQFC----GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 350
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILR 127
+ N + S S D + KVW+A TG+ +H+ + H VR E +++G + LR
Sbjct: 351 MRDNII--ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 406
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLET 186
++D+ + G V V + D + ++S D V++WD + + TL+
Sbjct: 407 VWDIETGQC----LHVLMGHVAAVRCVQYDGRRVVSGAYDFM-VKVWDPETETCLHTLQG 461
Query: 187 KSP-VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV 244
+ V S + DG ++ + T ++ WD + + ++ S +E K N V
Sbjct: 462 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-MELK-DNILV 517
Query: 245 AGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIW--QT 299
+G D V+ +D TG + +G H V C++F+ + S+DGT+++W +T
Sbjct: 518 SGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 575
Query: 300 GPVTNDDTETLTANGTIGKV 319
G + TL + G+ G V
Sbjct: 576 GEFIRN-LVTLESGGSGGVV 594
Score = 210 (79.0 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 75/268 (27%), Positives = 117/268 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+IS S D + + N ETG+ I T GH V C+ + R S S D + +VWD TG
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 413
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
LH H VR + D +++G + +++++D P+ + G V
Sbjct: 414 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETC-LHTLQGHTNRVY 467
Query: 153 WLHSDQT-ILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVK 211
L D ++S D +R+WDV +G + TL +TS +D ++ STVK
Sbjct: 468 SLQFDGIHVVSGSLDTS-IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 526
Query: 212 FWDANHFGLVKSYNMPCTIESASLEPKYGNKFV-AGGEDMWVRFFDFHTG----NEIACN 266
WD +++ P +SA ++ FV +D V+ +D TG N +
Sbjct: 527 IWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 586
Query: 267 KGHHGPVHC-VRFSPGGESYASGSEDGT 293
G G V +R S A GS +GT
Sbjct: 587 SGGSGGVVWRIRASNTKLVCAVGSRNGT 614
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 222 (83.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 72/287 (25%), Positives = 122/287 (42%)
Query: 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL 74
H PV + P +LIS S+D + G+ + T GH + CC +
Sbjct: 359 HELPVSCIVMHPCRD---YLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGS 415
Query: 75 RAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR 133
+ A++S D + K+WD G+ + E H H V +C++ + + ++ +I+D+N
Sbjct: 416 KLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNS 475
Query: 134 PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVTS 192
+ SV ++ + +L+ D + +WD R+G+ Q+L V
Sbjct: 476 ERCRYTLYGHTD-SVNSIEFFPFSNILLTASADKT-LSVWDARTGKCEQSLYGHMHSVND 533
Query: 193 AEVSQDGRYITTADGSTV-KFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDM 250
A + G I + D V K WD + S ++ P + + + G +
Sbjct: 534 ATFTPRGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQS-GRVLAQASANG 592
Query: 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ D +G +I GH VH V FS GE+ SG DGTIR+W
Sbjct: 593 IIHLLDLKSG-QIHKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 222 (83.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 83/320 (25%), Positives = 145/320 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P V GH V+ G ++S S D++ + + TG + T GH G VWS
Sbjct: 373 PKVLKGHDDHVITCLQFC----GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 428
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILR 127
+ N + S S D + KVW+A TG+ +H+ + H VR E +++G + LR
Sbjct: 429 MRDNII--ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 484
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLET 186
++D+ + G V V + D + ++S D V++WD + + TL+
Sbjct: 485 VWDIETGQC----LHVLMGHVAAVRCVQYDGRRVVSGAYDFM-VKVWDPETETCLHTLQG 539
Query: 187 KSP-VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV 244
+ V S + DG ++ + T ++ WD + + ++ S +E K N V
Sbjct: 540 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-MELK-DNILV 595
Query: 245 AGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIW--QT 299
+G D V+ +D TG + +G H V C++F+ + S+DGT+++W +T
Sbjct: 596 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 653
Query: 300 GPVTNDDTETLTANGTIGKV 319
G + TL + G+ G V
Sbjct: 654 GEFIRN-LVTLESGGSGGVV 672
Score = 208 (78.3 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 75/268 (27%), Positives = 117/268 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+IS S D + + N ETG+ I T GH V C+ + R S S D + +VWD TG
Sbjct: 434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 491
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
LH H VR + D +++G + +++++D P+ + G V
Sbjct: 492 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETC-LHTLQGHTNRVY 545
Query: 153 WLHSDQT-ILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVK 211
L D ++S D +R+WDV +G + TL +TS +D ++ STVK
Sbjct: 546 SLQFDGIHVVSGSLDTS-IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 604
Query: 212 FWDANHFGLVKSYNMPCTIESASLEPKYGNKFV-AGGEDMWVRFFDFHTG----NEIACN 266
WD +++ P +SA ++ FV +D V+ +D TG N +
Sbjct: 605 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 664
Query: 267 KGHHGPVHC-VRFSPGGESYASGSEDGT 293
G G V +R S A GS +GT
Sbjct: 665 SGGSGGVVWRIRASNTKLVCAVGSRNGT 692
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 222 (83.2 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 83/320 (25%), Positives = 145/320 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P V GH V+ G ++S S D++ + + TG + T GH G VWS
Sbjct: 378 PKVLKGHDDHVITCLQFC----GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 433
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILR 127
+ N + S S D + KVW+A TG+ +H+ + H VR E +++G + LR
Sbjct: 434 MRDNII--ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 489
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLET 186
++D+ + G V V + D + ++S D V++WD + + TL+
Sbjct: 490 VWDIETGQC----LHVLMGHVAAVRCVQYDGRRVVSGAYDFM-VKVWDPETETCLHTLQG 544
Query: 187 KSP-VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV 244
+ V S + DG ++ + T ++ WD + + ++ S +E K N V
Sbjct: 545 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-MELK-DNILV 600
Query: 245 AGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIW--QT 299
+G D V+ +D TG + +G H V C++F+ + S+DGT+++W +T
Sbjct: 601 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 658
Query: 300 GPVTNDDTETLTANGTIGKV 319
G + TL + G+ G V
Sbjct: 659 GEFIRN-LVTLESGGSGGVV 677
Score = 208 (78.3 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 75/268 (27%), Positives = 117/268 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+IS S D + + N ETG+ I T GH V C+ + R S S D + +VWD TG
Sbjct: 439 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 496
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
LH H VR + D +++G + +++++D P+ + G V
Sbjct: 497 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETC-LHTLQGHTNRVY 550
Query: 153 WLHSDQT-ILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVK 211
L D ++S D +R+WDV +G + TL +TS +D ++ STVK
Sbjct: 551 SLQFDGIHVVSGSLDTS-IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 609
Query: 212 FWDANHFGLVKSYNMPCTIESASLEPKYGNKFV-AGGEDMWVRFFDFHTG----NEIACN 266
WD +++ P +SA ++ FV +D V+ +D TG N +
Sbjct: 610 IWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 669
Query: 267 KGHHGPVHC-VRFSPGGESYASGSEDGT 293
G G V +R S A GS +GT
Sbjct: 670 SGGSGGVVWRIRASNTKLVCAVGSRNGT 697
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 222 (83.2 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 83/320 (25%), Positives = 145/320 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P V GH V+ G ++S S D++ + + TG + T GH G VWS
Sbjct: 426 PKVLKGHDDHVITCLQFC----GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 481
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILR 127
+ N + S S D + KVW+A TG+ +H+ + H VR E +++G + LR
Sbjct: 482 MRDNII--ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 537
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLET 186
++D+ + G V V + D + ++S D V++WD + + TL+
Sbjct: 538 VWDIETGQC----LHVLMGHVAAVRCVQYDGRRVVSGAYDFM-VKVWDPETETCLHTLQG 592
Query: 187 KSP-VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV 244
+ V S + DG ++ + T ++ WD + + ++ S +E K N V
Sbjct: 593 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-MELK-DNILV 648
Query: 245 AGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIW--QT 299
+G D V+ +D TG + +G H V C++F+ + S+DGT+++W +T
Sbjct: 649 SGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRT 706
Query: 300 GPVTNDDTETLTANGTIGKV 319
G + TL + G+ G V
Sbjct: 707 GEFIRN-LVTLESGGSGGVV 725
Score = 209 (78.6 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 75/268 (27%), Positives = 117/268 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+IS S D + + N ETG+ I T GH V C+ + R S S D + +VWD TG
Sbjct: 487 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 544
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
LH H VR + D +++G + +++++D P+ + G V
Sbjct: 545 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETC-LHTLQGHTNRVY 598
Query: 153 WLHSDQT-ILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVK 211
L D ++S D +R+WDV +G + TL +TS +D ++ STVK
Sbjct: 599 SLQFDGIHVVSGSLDTS-IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 657
Query: 212 FWDANHFGLVKSYNMPCTIESASLEPKYGNKFV-AGGEDMWVRFFDFHTG----NEIACN 266
WD +++ P +SA ++ FV +D V+ +D TG N +
Sbjct: 658 IWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLVTLE 717
Query: 267 KGHHGPVHC-VRFSPGGESYASGSEDGT 293
G G V +R S A GS +GT
Sbjct: 718 SGGSGGVVWRIRASNTKLVCAVGSRNGT 745
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 214 (80.4 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 74/278 (26%), Positives = 125/278 (44%)
Query: 29 PDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
P+G L SA D +L N G+ ++ T +GH GAV +T+ SAS D +
Sbjct: 77 PNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 87 VWDALTGDVLHSFE-HKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
VWD+ TG+ + + H V +C L+ TG + ++++D+ + A + ++
Sbjct: 136 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAV--QTFQN 193
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI- 202
V V + + I+S D +++WD+R ++ T+ + VT +S +G Y+
Sbjct: 194 TYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 203 TTADGSTVKFWDANHFG----LVKSY-----NMPCTIESASLEPKYGNKFVAGGEDMWVR 253
+ A +TV+ WD F VK + N + S P G+K AG D +V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-GSKIAAGSADRFVY 311
Query: 254 FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
+D + + GH G ++ V F P S S D
Sbjct: 312 VWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 167 (63.8 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 46/164 (28%), Positives = 83/164 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++L Y+ DG L SAS D + + + ETG+ + +GH V SC
Sbjct: 108 GHSGAVMELHYNT---DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 74 LR-AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ + S D + K+WD + +F++ + V A +F++ + +++GG++ ++++DL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL- 223
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R + + SV ++ +LS D VR+WDVR
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD-NTVRVWDVR 266
Score = 153 (58.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 62/255 (24%), Positives = 103/255 (40%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDTHL 116
GH+G V+ C N ASA D +W+ D + + H V ++ D +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + +K + ++D + R + V + ++ T +D G V+LWD+R
Sbjct: 125 LFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 177 SGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESA-- 233
VQT + V + + I + + +K WD L +Y M +S
Sbjct: 184 KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHADSVTG 241
Query: 234 -SLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGPVH-----CVR--FSPGGES 284
SL + G+ ++ D VR +D + C K G VH +R +SP G
Sbjct: 242 LSLSSE-GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 300
Query: 285 YASGSEDGTIRIWQT 299
A+GS D + +W T
Sbjct: 301 IAAGSADRFVYVWDT 315
Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 44/204 (21%), Positives = 87/204 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ V C F + L + G ++++ ++++ + G+V + + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI--TTADGSTVKFWDANH 217
S TD V +WD +GE V+ L+ + V S ++ G + T +D TVK WD
Sbjct: 126 FSASTDKT-VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 218 FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR 277
V+++ + + + ++ ++GG D ++ +D +GH V +
Sbjct: 185 KAAVQTFQNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 278 FSPGGESYASGSEDGTIRIWQTGP 301
S G S + D T+R+W P
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRP 267
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 216 (81.1 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 72/291 (24%), Positives = 128/291 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + ++ P G + + S D + L + ETG TF GH + + +
Sbjct: 132 GHRNVVYAIAFN--NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
A+ S D +AK+WD +G+ + + H + + SF+ + ++TG + + +++ +
Sbjct: 190 TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
Query: 133 RPDAPPREVDRSPGSVRTV--AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP- 189
R+V G + A + D +++ T + +LWD +G+ V TL
Sbjct: 250 TG----RKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE 305
Query: 190 VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGG 247
+ + G+ I TA DG+ F A + K I S P+ GN+ + G
Sbjct: 306 ILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQ-GNRLLTGS 364
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
D R +D TG + +GH + F+ G+ +GS+D T RIW+
Sbjct: 365 SDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 213 (80.0 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 76/298 (25%), Positives = 130/298 (43%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
V H P+ ++ + G I+ S D + L + +G+ + T EGH+ V++ +
Sbjct: 87 VLRAHILPLTNV---ALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 71 TN-ALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRI 128
+ A+ S D + K+W TG H+F H + SF+ + L+ TG M+ ++
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK- 187
+D+ + S + ++++ S I++ D V +W+ +G V TL
Sbjct: 204 WDIQSGEEVFTLTGHS-AEIISLSFNTSGNRIITGSFDHT-VTVWEADTGRKVYTLIGHC 261
Query: 188 SPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVA 245
+ ++SA + D I T T K WDA + V + I + + Y K +A
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFD--YTGKLIA 319
Query: 246 -GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW--QTG 300
D R F T + +GH G + + F+P G +GS D T RIW QTG
Sbjct: 320 TASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTG 377
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 62/247 (25%), Positives = 109/247 (44%)
Query: 78 SASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDT-HLLLTGGMEKILRIFDLNRPD 135
+ S D + K+WD +G+ LH+ E H+++V A +F+ + TG +K +++ +
Sbjct: 109 TGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGK 168
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAE 194
R + + T+++T + +LWD++SGE V TL S + S
Sbjct: 169 C--YHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLS 226
Query: 195 VSQDG-RYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVR 253
+ G R IT + TV W+A+ V + C S+++ + + G D +
Sbjct: 227 FNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCK 286
Query: 254 FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
+D G +A GH + F G+ A+ S DGT RI+ T + L +
Sbjct: 287 LWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA--TRECVTKLEGH 344
Query: 314 -GTIGKV 319
G I K+
Sbjct: 345 EGEISKI 351
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 219 (82.2 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 71/243 (29%), Positives = 110/243 (45%)
Query: 83 FSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVD 142
++ V L D+LH+ +H +V +FS D L TG + +I+D++ VD
Sbjct: 262 YNPSVQTNLNIDLLHNLQHNSVVCCVNFSNDGKYLATG-CNRSAQIYDVDTGKKVHAFVD 320
Query: 143 RSP--GS--VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQ 197
S G +R+V + D L+T + V++WD+ + +I T + S + S
Sbjct: 321 ESEKDGDLYIRSVCF-SPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSS 379
Query: 198 DGRYITTADGST-VKFWDANH----FGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMW 251
DGR+I + G K WD F L P + S ++ P G AG D
Sbjct: 380 DGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD-GRLVAAGSLDNI 438
Query: 252 VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLT 311
VR +D TG + +GH V+ V FSP G+S ASGS D ++++W + T
Sbjct: 439 VRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRAT 498
Query: 312 ANG 314
NG
Sbjct: 499 FNG 501
Score = 188 (71.2 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 73/289 (25%), Positives = 129/289 (44%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTF--EGHK-GAVW--SCCLDTNALRAASASADFS 84
DG +L + S+ + + +TG + F E K G ++ S C + A+ + D +
Sbjct: 292 DGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLATGAEDKT 350
Query: 85 AKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP----PR 139
KVWD T + H+F H+ + + +S D +++G +K +I+D+ +
Sbjct: 351 VKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNE 410
Query: 140 EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQD 198
EV G V +VA + + + D VRLWD ++G ++ E V S S D
Sbjct: 411 EVGPKNG-VTSVAMSPDGRLVAAGSLD-NIVRLWDAQTGYFLERYEGHLDSVYSVAFSPD 468
Query: 199 GRYITTAD-GSTVKFWDAN----HFGLVKSYN-MPCTIESASLEPKYGNKFVAGGEDMWV 252
G+ + + ++K WD + ++N + S + P G+ ++G +D V
Sbjct: 469 GKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPD-GSWLISGSKDRSV 527
Query: 253 RFFDFHTGNEIACNKGHHGPVHCVRFSPGGES---YASGSEDGTIRIWQ 298
+F+D G +GH V V SP S +A+GS D R+W+
Sbjct: 528 QFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 183 (69.5 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 62/256 (24%), Positives = 114/256 (44%)
Query: 60 HKGAVWSCCLD-TNALRAASASADFSAKVWDALTGDVLHSFEHKH------IVRACSFSE 112
H V CC++ +N + + + SA+++D TG +H+F + +R+ FS
Sbjct: 280 HNSVV--CCVNFSNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSP 337
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
D + L TG +K ++++D++ + ++ + + I+S D ++
Sbjct: 338 DGNYLATGAEDKTVKVWDIHTKKIQHTFYGHEL-DIYSLDYSSDGRFIVSGSGDKKA-KI 395
Query: 173 WDVRSGEIVQTLET-----KSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNM 226
WD+ G+ TL K+ VTS +S DGR + + V+ WDA ++ Y
Sbjct: 396 WDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEG 455
Query: 227 PC-TIESASLEPKYGNKFVAGGEDMWVRFFDFH-TGNEIACN---KGHHGPVHCVRFSPG 281
++ S + P G +G D ++ +D + + C GH V V FSP
Sbjct: 456 HLDSVYSVAFSPD-GKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPD 514
Query: 282 GESYASGSEDGTIRIW 297
G SGS+D +++ W
Sbjct: 515 GSWLISGSKDRSVQFW 530
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 59/206 (28%), Positives = 95/206 (46%)
Query: 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDW---IGTFE-GHKGAVWSCC 68
+GH + L YS DG F++S S D + + E G +G E G K V S
Sbjct: 366 YGHELDIYSLDYSS---DGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVA 422
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILR 127
+ + A+ S D ++WDA TG L +E H V + +FS D L +G ++K L+
Sbjct: 423 MSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLK 482
Query: 128 IFDLNRPDAPPR---EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL 184
++DL+ + R + V +VA+ ++S D V+ WD R+G L
Sbjct: 483 LWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRS-VQFWDPRNGTTHMML 541
Query: 185 ET-KSPVTSAEVS-QDGRYITTADGS 208
+ K+ V S +S ++ + A GS
Sbjct: 542 QGHKNSVISVALSPKNNSHGVFATGS 567
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 63/256 (24%), Positives = 112/256 (43%)
Query: 21 DLFYSPI--TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAAS 78
DL+ + +PDG +L + ++D + + + T TF GH+ ++S ++ S
Sbjct: 327 DLYIRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVS 386
Query: 79 ASADFSAKVWDALTGDVLHSFEHKHI-----VRACSFSEDTHLLLTGGMEKILRIFDLNR 133
S D AK+WD G + ++ + V + + S D L+ G ++ I+R++D
Sbjct: 387 GSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT 446
Query: 134 PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV---RSGEIVQTLET--KS 188
R + SV +VA+ +++ S D ++LWD+ RS + K
Sbjct: 447 GYFLER-YEGHLDSVYSVAFSPDGKSLASGSLDKS-LKLWDLSGSRSRSRCRATFNGHKD 504
Query: 189 PVTSAEVSQDGRY-ITTADGSTVKFWD----ANHFGLVKSYNMPCTIESASLEPKYGNK- 242
V S S DG + I+ + +V+FWD H L N ++ S +L PK +
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKN---SVISVALSPKNNSHG 561
Query: 243 -FVAGGEDMWVRFFDF 257
F G D R + +
Sbjct: 562 VFATGSGDFRSRLWKY 577
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 213 (80.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 78/287 (27%), Positives = 129/287 (44%)
Query: 31 GFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW 88
G L S D L N GE ++ +GHKG + T++ +A D S VW
Sbjct: 74 GTALASGGSDKEIFLWNVYGECINY-SVLKGHKGTILELHWSTDSNEIYTACTDKSIGVW 132
Query: 89 DALTGDVLHSF-EHKHIVRACSFSE-DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG 146
D+ G+++ EH +V +C + L+ +G ++ RIFD + + P
Sbjct: 133 DSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYP- 191
Query: 147 SVRTVAWLH-SDQTILSTCTDMGGVRLWDVRSGEI-VQTLET-KSPVTSAEVSQDGRYI- 202
V +V + SDQ I ++ +R+WD+R+ E + TL + + +TS VS+DG Y+
Sbjct: 192 -VTSVCFSDASDQLITGGIDNV--IRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLL 248
Query: 203 TTADGSTVKFWDANHFGL----VKSYN-MPCTIESASLEPKY---GNKFVAGGEDMWVRF 254
+ + ++ K WD + +K++N E ++ + G + G D V
Sbjct: 249 SNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYI 308
Query: 255 FDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
+D +T C GH G V+ V F P AS S D TI + + P
Sbjct: 309 WDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEIKP 355
Score = 175 (66.7 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 44/167 (26%), Positives = 80/167 (47%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC-L 69
V GH +++L +S D + +A D S + + G+ I H G V SCC
Sbjct: 100 VLKGHKGTILELHWST---DSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPA 156
Query: 70 DTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIF 129
AS S D SA+++D + H F+HK+ V + FS+ + L+TGG++ ++R++
Sbjct: 157 RRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVW 216
Query: 130 DLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
D+ + P + ++ + + +LS D ++WD+R
Sbjct: 217 DIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMD-NSCKIWDIR 262
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 47/245 (19%), Positives = 93/245 (37%)
Query: 95 VLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWL 154
++ HK + +C F+ L +GG +K + ++++ + G++ + W
Sbjct: 55 IMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWS 114
Query: 155 HSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYITTA--DGSTVK 211
I + CTD + +WD GE+++ + E V S ++ G + + D + +
Sbjct: 115 TDSNEIYTACTDKS-IGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSAR 173
Query: 212 FWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE-IACNKGHH 270
+D G + + S ++ + GG D +R +D + + H
Sbjct: 174 IFDTRSKGSTHLFQHKYPVTSVCFSDA-SDQLITGGIDNVIRVWDIRNQEDPLYTLASHQ 232
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANGTIGKVKVTADEVSRKI 330
+ S G S S D + +IW P + T NG + + S I
Sbjct: 233 DTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSI 292
Query: 331 EGFHI 335
+G I
Sbjct: 293 DGRRI 297
Score = 133 (51.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 63/281 (22%), Positives = 115/281 (40%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSF--EHKHIVRACSFSEDTHL 116
GHKG ++SC ++ AS +D +W+ + +S HK + +S D++
Sbjct: 60 GHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNE 119
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
+ T +K + ++D N+ + R + S G V + ++++ +D R++D R
Sbjct: 120 IYTACTDKSIGVWDSNKGELIKRIREHS-GVVNSCCPARRGPPLVASGSDDRSARIFDTR 178
Query: 177 SGEIVQTLETKSPVTSAEVSQ-DGRYITTADGSTVKFWDANHFG--LVKSYNMPCTIESA 233
S + K PVTS S + IT + ++ WD + L + TI S
Sbjct: 179 SKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITST 238
Query: 234 SLEPKYGNKFVAGGEDMWVRFFDFHT----GNEIACNKG--HHGPVHCVR--FSPGGESY 285
S+ K G ++ D + +D I G ++ + ++ +S G
Sbjct: 239 SVS-KDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRI 297
Query: 286 ASGSEDGTIRIWQTGPVTNDDTETLTAN-GTIGKVKVTADE 325
GS D + IW T T L + GT+ +V +E
Sbjct: 298 GCGSSDRQVYIWDTN--TKQLQYCLPGHSGTVNEVTFHPNE 336
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 217 (81.4 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 64/220 (29%), Positives = 107/220 (48%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH R V + +SP D + S D + + TG I TFEGH + + +
Sbjct: 174 GHLRGVSAVRFSP---DASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDG 230
Query: 74 LRAASASADFSAKVWDALTGDVLHS--FEHKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
AS S D + ++W+ LTG + H + V A +FS ++L++G ++ + ++D+
Sbjct: 231 ATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDV 290
Query: 132 NRP---DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL--ET 186
+ P D P S V W D T++++C G VR+WD +G+ ++TL E
Sbjct: 291 RSARVMKSLPAHSD--PVSGIDVVW---DGTLIASCATDGLVRIWDTSTGQCLRTLVHED 345
Query: 187 KSPVTSAEVSQDGRYIT--TADGSTVKFWDANHFGLVKSY 224
PV+S + S +G+Y+ T D V+ WD +K+Y
Sbjct: 346 NPPVSSVKFSPNGKYVLAWTLD-DCVRLWDYVEGRCLKTY 384
Score = 205 (77.2 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 76/258 (29%), Positives = 115/258 (44%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
GH V + +A AS AD + KVW A TG ++++FE H + S+S D +
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATI 233
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
+G +K +R++++ A P V +A+ ++S D V LWDVRS
Sbjct: 234 ASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEA-VFLWDVRS 292
Query: 178 GEIVQTLETKS-PVTSAEVSQDGRYITT-ADGSTVKFWDANHFG----LVKSYNMPCTIE 231
++++L S PV+ +V DG I + A V+ WD + LV N P +
Sbjct: 293 ARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPP--VS 350
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR--FSPGGES----- 284
S P G +A D VR +D+ G + +GH + + F G+S
Sbjct: 351 SVKFSPN-GKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRT 409
Query: 285 --YA---SGSEDGTIRIW 297
YA SGSEDG I W
Sbjct: 410 PGYAFAVSGSEDGAILCW 427
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 43/173 (24%), Positives = 77/173 (44%)
Query: 157 DQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITT-ADGSTVKFWD 214
D +++++ G V++W +G+++ T E + +++ S DG I + +D T++ W+
Sbjct: 187 DASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWN 246
Query: 215 -----ANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
A+ + +N + + + PK GN V+G D V +D + + H
Sbjct: 247 VLTGKAHPTPFIGHHNY---VYAIAFSPK-GNMLVSGSYDEAVFLWDVRSARVMKSLPAH 302
Query: 270 HGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTA--NGTIGKVK 320
PV + G AS + DG +RIW T T TL N + VK
Sbjct: 303 SDPVSGIDVVWDGTLIASCATDGLVRIWDTS--TGQCLRTLVHEDNPPVSSVK 353
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 213 (80.0 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 66/247 (26%), Positives = 102/247 (41%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVW-DALTGDVLHSFEHKHIVRACSFSEDTH 115
F GHK AV + AS S D + ++W + G+ H VR+ F D
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 78
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
+T +K ++++ +R + + VR + + I+S D V+LWD
Sbjct: 79 SFVTASDDKTVKVWATHRQKFL-FSLSQHINWVRCAKFSPDGRLIVSASDDKT-VKLWDK 136
Query: 176 RSGEIVQTL-ETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNM-PCTIES 232
S E V + E VT + G I A +TVK WD L++ Y + +
Sbjct: 137 SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNG 196
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
S P GN + D ++ D G + GH GP V FS GE +ASG D
Sbjct: 197 LSFHPS-GNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDE 255
Query: 293 TIRIWQT 299
+ +W++
Sbjct: 256 QVMVWKS 262
Score = 159 (61.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 84/348 (24%), Positives = 135/348 (38%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + +SP G L S S+D + + F H V S ++
Sbjct: 21 GHKDAVTCVNFSP---SGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 77
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+AS D + KVW L S +H + VR FS D L+++ +K ++++D +
Sbjct: 78 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKS 137
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VT 191
+ + G T H T ++ V++WDVR+ ++Q + S V
Sbjct: 138 SRECVHSYCEH--GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 195
Query: 192 SAEVSQDGRYITTADG-STVKFWDANHFGLVKS---YNMPCTIESASLEPKYGNKFVAGG 247
G Y+ TA ST+K D L+ + + P T + S + G F +GG
Sbjct: 196 GLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFS---RTGEYFASGG 252
Query: 248 ED----MWVRFFDFHTGNEI-------ACNKGHHGPVHCVRFS-PGGESYASGSEDGTIR 295
D +W FD E+ A G + V F P G G +++
Sbjct: 253 SDEQVMVWKSNFDIVDHGEVTKVPRPPATLASSMGNLPEVDFPVPPGR----GRSVESVQ 308
Query: 296 IWQTGPVTNDDTETLTANGTIGKVKVTADEVSRKIEGFHIADEGKMKE 343
PV+ T T T +G++ V VS +E E K+K+
Sbjct: 309 SQPQEPVSVPQTLTSTLEHIVGQLDVLTQTVSI-LEQRLTLTEDKLKQ 355
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 212 (79.7 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 74/278 (26%), Positives = 125/278 (44%)
Query: 29 PDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
P+G L SA D +L N G+ ++ T +GH GAV +T+ SAS D +
Sbjct: 76 PNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 134
Query: 87 VWDALTGDVLHSFE-HKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
VWD+ TG+ + + H V +C L+ TG + ++++D+ + A + ++
Sbjct: 135 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQN 192
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI- 202
V V + + I+S D +++WD+R ++ T+ + VT +S +G Y+
Sbjct: 193 TYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 251
Query: 203 TTADGSTVKFWDANHFG----LVKSY-----NMPCTIESASLEPKYGNKFVAGGEDMWVR 253
+ A +TV+ WD F VK + N + S P G+K AG D +V
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-GSKIAAGSADRFVY 310
Query: 254 FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
+D + + GH G ++ V F P S S D
Sbjct: 311 VWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 168 (64.2 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 46/164 (28%), Positives = 83/164 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++L Y+ DG L SAS D + + + ETG+ + +GH V SC
Sbjct: 107 GHSGAVMELHYNT---DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 74 LR-AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ + S D + K+WD + +F++ + V A +F++ + +++GG++ ++++DL
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL- 222
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R + + SV ++ +LS D VR+WDVR
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD-NTVRVWDVR 265
Score = 152 (58.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 61/255 (23%), Positives = 103/255 (40%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDTHL 116
GH+G V+ C N ASA D +W+ D + + H V ++ D +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + +K + ++D + R + V + ++ T +D G V+LWD+R
Sbjct: 124 LFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 182
Query: 177 SGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESA-- 233
+QT + V + + I + + +K WD L +Y M +S
Sbjct: 183 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHADSVTG 240
Query: 234 -SLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGPVH-----CVR--FSPGGES 284
SL + G+ ++ D VR +D + C K G VH +R +SP G
Sbjct: 241 LSLSSE-GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 299
Query: 285 YASGSEDGTIRIWQT 299
A+GS D + +W T
Sbjct: 300 IAAGSADRFVYVWDT 314
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/204 (21%), Positives = 87/204 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ V C F + L + G ++++ ++++ + G+V + + +
Sbjct: 65 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 124
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI--TTADGSTVKFWDANH 217
S TD V +WD +GE V+ L+ + V S ++ G + T +D TVK WD
Sbjct: 125 FSASTDKT-VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 183
Query: 218 FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR 277
++++ + + + ++ ++GG D ++ +D +GH V +
Sbjct: 184 KAAIQTFQNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 242
Query: 278 FSPGGESYASGSEDGTIRIWQTGP 301
S G S + D T+R+W P
Sbjct: 243 LSSEGSYLLSNAMDNTVRVWDVRP 266
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 212 (79.7 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 74/278 (26%), Positives = 125/278 (44%)
Query: 29 PDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
P+G L SA D +L N G+ ++ T +GH GAV +T+ SAS D +
Sbjct: 77 PNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 87 VWDALTGDVLHSFE-HKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
VWD+ TG+ + + H V +C L+ TG + ++++D+ + A + ++
Sbjct: 136 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQN 193
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI- 202
V V + + I+S D +++WD+R ++ T+ + VT +S +G Y+
Sbjct: 194 TYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 203 TTADGSTVKFWDANHFG----LVKSY-----NMPCTIESASLEPKYGNKFVAGGEDMWVR 253
+ A +TV+ WD F VK + N + S P G+K AG D +V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-GSKIAAGSADRFVY 311
Query: 254 FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
+D + + GH G ++ V F P S S D
Sbjct: 312 VWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 168 (64.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 46/164 (28%), Positives = 83/164 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++L Y+ DG L SAS D + + + ETG+ + +GH V SC
Sbjct: 108 GHSGAVMELHYNT---DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 74 LR-AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ + S D + K+WD + +F++ + V A +F++ + +++GG++ ++++DL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL- 223
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R + + SV ++ +LS D VR+WDVR
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD-NTVRVWDVR 266
Score = 152 (58.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 61/255 (23%), Positives = 103/255 (40%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDTHL 116
GH+G V+ C N ASA D +W+ D + + H V ++ D +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + +K + ++D + R + V + ++ T +D G V+LWD+R
Sbjct: 125 LFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 177 SGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESA-- 233
+QT + V + + I + + +K WD L +Y M +S
Sbjct: 184 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHADSVTG 241
Query: 234 -SLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGPVH-----CVR--FSPGGES 284
SL + G+ ++ D VR +D + C K G VH +R +SP G
Sbjct: 242 LSLSSE-GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 300
Query: 285 YASGSEDGTIRIWQT 299
A+GS D + +W T
Sbjct: 301 IAAGSADRFVYVWDT 315
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/204 (21%), Positives = 87/204 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ V C F + L + G ++++ ++++ + G+V + + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI--TTADGSTVKFWDANH 217
S TD V +WD +GE V+ L+ + V S ++ G + T +D TVK WD
Sbjct: 126 FSASTDKT-VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 218 FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR 277
++++ + + + ++ ++GG D ++ +D +GH V +
Sbjct: 185 KAAIQTFQNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 278 FSPGGESYASGSEDGTIRIWQTGP 301
S G S + D T+R+W P
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRP 267
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 212 (79.7 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 74/278 (26%), Positives = 125/278 (44%)
Query: 29 PDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
P+G L SA D +L N G+ ++ T +GH GAV +T+ SAS D +
Sbjct: 77 PNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 87 VWDALTGDVLHSFE-HKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
VWD+ TG+ + + H V +C L+ TG + ++++D+ + A + ++
Sbjct: 136 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQN 193
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI- 202
V V + + I+S D +++WD+R ++ T+ + VT +S +G Y+
Sbjct: 194 TYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 203 TTADGSTVKFWDANHFG----LVKSY-----NMPCTIESASLEPKYGNKFVAGGEDMWVR 253
+ A +TV+ WD F VK + N + S P G+K AG D +V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-GSKIAAGSADRFVY 311
Query: 254 FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
+D + + GH G ++ V F P S S D
Sbjct: 312 VWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 168 (64.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 46/164 (28%), Positives = 83/164 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++L Y+ DG L SAS D + + + ETG+ + +GH V SC
Sbjct: 108 GHSGAVMELHYNT---DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 74 LR-AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ + S D + K+WD + +F++ + V A +F++ + +++GG++ ++++DL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL- 223
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R + + SV ++ +LS D VR+WDVR
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD-NTVRVWDVR 266
Score = 152 (58.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 61/255 (23%), Positives = 103/255 (40%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDTHL 116
GH+G V+ C N ASA D +W+ D + + H V ++ D +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + +K + ++D + R + V + ++ T +D G V+LWD+R
Sbjct: 125 LFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 177 SGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESA-- 233
+QT + V + + I + + +K WD L +Y M +S
Sbjct: 184 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHADSVTG 241
Query: 234 -SLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGPVH-----CVR--FSPGGES 284
SL + G+ ++ D VR +D + C K G VH +R +SP G
Sbjct: 242 LSLSSE-GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 300
Query: 285 YASGSEDGTIRIWQT 299
A+GS D + +W T
Sbjct: 301 IAAGSADRFVYVWDT 315
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/204 (21%), Positives = 87/204 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ V C F + L + G ++++ ++++ + G+V + + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI--TTADGSTVKFWDANH 217
S TD V +WD +GE V+ L+ + V S ++ G + T +D TVK WD
Sbjct: 126 FSASTDKT-VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 218 FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR 277
++++ + + + ++ ++GG D ++ +D +GH V +
Sbjct: 185 KAAIQTFQNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 278 FSPGGESYASGSEDGTIRIWQTGP 301
S G S + D T+R+W P
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRP 267
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 206 (77.6 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 68/275 (24%), Positives = 121/275 (44%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
DG + ++ KD + L N G I T++ H V + ++ + S D WD
Sbjct: 29 DGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWD 88
Query: 90 ALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREV-DRSPGS 147
TG V+ F H V A F++ + ++++ G ++ LR++D P ++ D +
Sbjct: 89 VSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDT 148
Query: 148 VRTVAWLHSDQTILSTCTDMGGVRLWDVRSG-EIVQTLETKSPVTSAEVSQDGRYITTAD 206
V +V ++ I+ D G VR +D+R G E+ L PV +S DG +
Sbjct: 149 VMSVVLTKTE--IIGGSVD-GTVRTFDMRIGREMSDNLG--QPVNCISISNDGNCVLAGC 203
Query: 207 -GSTVKFWDANHFGLVKSY--NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEI 263
ST++ D L++ Y ++ + ++ + G ED V F+D +
Sbjct: 204 LDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVL 263
Query: 264 ACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
+ + H V V + P + + S DGTIR+W+
Sbjct: 264 SKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVWK 298
Score = 142 (55.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 60/247 (24%), Positives = 106/247 (42%)
Query: 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHL 116
+GH+GAV + + + A + D + ++W+ G ++ +++ H VR + D
Sbjct: 15 KGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAK 74
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
+ G ++ + +D++ R+ G V V + S ++S D +R+WD R
Sbjct: 75 FCSCGGDRQVYYWDVSTGRVI-RKFRGHDGEVNAVKFNDSSSVVVSAGFDRS-LRVWDCR 132
Query: 177 SGEI--VQTLET-KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESA 233
S + VQ ++T V S +++ + DG TV+ +D G S N+ +
Sbjct: 133 SHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDG-TVRTFDMR-IGREMSDNLGQPVNCI 190
Query: 234 SLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP---VHCVRFSPGGESYASGSE 290
S+ GN +AG D +R D TG + KGH C + GSE
Sbjct: 191 SISND-GNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCC-LTNSDAHVIGGSE 248
Query: 291 DGTIRIW 297
DG + W
Sbjct: 249 DGLVFFW 255
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/140 (26%), Positives = 64/140 (45%)
Query: 190 VTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGN-KFVAGG 247
V +A + DG Y +T T++ W+ + L+K+Y E + N KF + G
Sbjct: 21 VLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGR-EVRDVHVTSDNAKFCSCG 79
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDT 307
D V ++D TG I +GH G V+ V+F+ S D ++R+W + +
Sbjct: 80 GDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPV 139
Query: 308 ETL-TANGTIGKVKVTADEV 326
+ + T T+ V +T E+
Sbjct: 140 QIIDTFLDTVMSVVLTKTEI 159
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 60/237 (25%), Positives = 99/237 (41%)
Query: 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL 74
H R V D+ +T D S D + TG I F GH G V + + ++
Sbjct: 59 HGREVRDVH---VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSS 115
Query: 75 RAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDT-HLLLT------GGMEKILR 127
SA D S +VWD + HS E I+ +F + ++LT G ++ +R
Sbjct: 116 VVVSAGFDRSLRVWDCRS----HSVEPVQIID--TFLDTVMSVVLTKTEIIGGSVDGTVR 169
Query: 128 IFDLNRPDAPPREVDRSPGS-VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE- 185
FD+ RE+ + G V ++ + +L+ C D +RL D +GE++Q +
Sbjct: 170 TFDMRIG----REMSDNLGQPVNCISISNDGNCVLAGCLD-STLRLLDRTTGELLQVYKG 224
Query: 186 --TKSPVTSAEVSQ-DGRYITTADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPK 238
+KS T ++ D I ++ V FWD ++ + + S S PK
Sbjct: 225 HISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPK 281
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 216 (81.1 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 78/301 (25%), Positives = 137/301 (45%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P V GH V+ G ++S S D++ + + TG + T GH G VWS
Sbjct: 295 PKVLKGHDDHVITCLQFC----GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 350
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILR 127
+ N + S S D + KVW+A TG+ +H+ + H VR E +++G + LR
Sbjct: 351 MRDNII--ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLR 406
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLET 186
++D+ + G V V + D + ++S D V++WD + + TL+
Sbjct: 407 VWDIETGQC----LHVLMGHVAAVRCVQYDGRRVVSGAYDFM-VKVWDPETETCLHTLQG 461
Query: 187 KSP-VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV 244
+ V S + DG ++ + T ++ WD + + ++ S +E K N V
Sbjct: 462 HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG-MELK-DNILV 517
Query: 245 AGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIW--QT 299
+G D V+ +D TG + +G H V C++F+ + S+DGT+++W +T
Sbjct: 518 SGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKT 575
Query: 300 G 300
G
Sbjct: 576 G 576
Score = 203 (76.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 65/233 (27%), Positives = 104/233 (44%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+IS S D + + N ETG+ I T GH V C+ + R S S D + +VWD TG
Sbjct: 356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 413
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
LH H VR + D +++G + +++++D P+ + G V
Sbjct: 414 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD---PETETC-LHTLQGHTNRVY 467
Query: 153 WLHSDQT-ILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVK 211
L D ++S D +R+WDV +G + TL +TS +D ++ STVK
Sbjct: 468 SLQFDGIHVVSGSLDTS-IRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 526
Query: 212 FWDANHFGLVKSYNMPCTIESASLEPKYGNKFV-AGGEDMWVRFFDFHTGNEI 263
WD +++ P +SA ++ FV +D V+ +D TG I
Sbjct: 527 IWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 579
Score = 164 (62.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 41/159 (25%), Positives = 81/159 (50%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
DG ++S + D + + ET + T +GH V+S L + + S S D S +VWD
Sbjct: 432 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS--LQFDGIHVVSGSLDTSIRVWD 489
Query: 90 ALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV 148
TG+ +H+ H+ + ++ +L++G + ++I+D+ + + P
Sbjct: 490 VETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQC--LQTLQGPSKH 545
Query: 149 RT-VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET 186
++ V L ++ + T +D G V+LWD+++GE ++ L T
Sbjct: 546 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 584
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 214 (80.4 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 73/290 (25%), Positives = 122/290 (42%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + + +SP +G L + S D+ ML + + GHK + S
Sbjct: 16 GHKAAITSVDFSP---NGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLG 72
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASAS D + ++W F+ H VR+ FS D L + +K ++++++
Sbjct: 73 NLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMY 132
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
R + R VR A D ++ +C++ +++WD + + V +
Sbjct: 133 RQRFL-YSLYRHTHWVRC-AKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFAN 190
Query: 193 -AEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGED 249
+ +G I +A TVK WD L++ Y + + S P GN + D
Sbjct: 191 FVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPS-GNYLITASSD 249
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ D G I +GH GPV V FS GGE + SG D + +W+T
Sbjct: 250 GTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRT 299
Score = 196 (74.1 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 57/244 (23%), Positives = 109/244 (44%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT-GDVLHSFEHKHIVRACSFSEDTH 115
F+GHK A+ S N + A+ S D +W HK ++ + FS +
Sbjct: 14 FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGN 73
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL + ++ +R++ ++ E VR+V + +D L++ ++ +++W++
Sbjct: 74 LLASASRDRTIRLWIPDKR-GKSSEFKAHTAPVRSVDF-SADGQFLASASEDKSIKVWNM 131
Query: 176 RSGEIVQTLETKSP-VTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIES- 232
+ +L + V A+ S DGR I + ++ T+K WD + V +++ +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANF 191
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
+ P G + G D V+ +D + + H G V+CV F P G + S DG
Sbjct: 192 VAFNPN-GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDG 250
Query: 293 TIRI 296
T++I
Sbjct: 251 TLKI 254
>ASPGD|ASPL0000040628 [details] [associations]
symbol:AN2997 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016282
"eukaryotic 43S preinitiation complex" evidence=IEA] [GO:0071541
"eukaryotic translation initiation factor 3 complex, eIF3m"
evidence=IEA] [GO:0034399 "nuclear periphery" evidence=IEA]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0003743 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
OMA:ATVAGWS RefSeq:XP_660601.1 ProteinModelPortal:Q5B8Y3
STRING:Q5B8Y3 EnsemblFungi:CADANIAT00010083 GeneID:2874320
KEGG:ani:AN2997.2 OrthoDB:EOG44QX8Q Uniprot:Q5B8Y3
Length = 336
Score = 209 (78.6 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 63/256 (24%), Positives = 115/256 (44%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P++ GH R + + ++ DG L S +KD G+ +GT+ GH GA+W+
Sbjct: 3 PILLAGHERSLNQIKFNR---DGDLLFSVAKDKIVCAWWSANGERLGTYSGHLGAIWTVD 59
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLT------G-- 120
+ N + A+ SAD S ++W+ TG+ + +E V+ FS D +L G
Sbjct: 60 VSPNTVLLATGSADNSVRLWNVKTGECVKVWEFPTAVKRVEFSPDGSKVLAVTEKRMGFL 119
Query: 121 GMEKILRI-FD---LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
G +L I +D N+ + P + + W + + I++ D G V +D +
Sbjct: 120 GTIAVLDINYDGDFTNQAEEPSLRITCTESKATVAGWSYLGKYIIAGHED-GSVSQYDAK 178
Query: 177 SGEI---VQTLETKSPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLVKSYNMPCTIES 232
+GE VQ E + + S D ++T + + K + + ++K+Y + S
Sbjct: 179 TGEQLENVQAHEFDHQINDLQFSPDRTHFLTASKDKSAKLMSSRNLAILKTYVADTPLNS 238
Query: 233 ASLEPKYGNKFVAGGE 248
A++ PK + GG+
Sbjct: 239 AAITPKKEYVILGGGQ 254
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 179 EIVQTLETKSPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEP 237
E VQ E + + S D ++T + + K + + ++K+Y + SA++ P
Sbjct: 184 ENVQAHEFDHQINDLQFSPDRTHFLTASKDKSAKLMSSRNLAILKTYVADTPLNSAAITP 243
Query: 238 KYGNKFVAGGE---DMWV----------RFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
K + GG+ D+ RF+ +EI KGH GP++ + P G +
Sbjct: 244 KKEYVILGGGQAAMDVTTTSARQGKFEARFYHKVFEDEIGRVKGHFGPLNTIHVHPAGTA 303
Query: 285 YASGSEDGTIRI 296
YASG EDG +R+
Sbjct: 304 YASGGEDGYVRV 315
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 44/167 (26%), Positives = 78/167 (46%)
Query: 146 GSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA 205
G++ TV + + +L+T + VRLW+V++GE V+ E + V E S DG +
Sbjct: 53 GAIWTVD-VSPNTVLLATGSADNSVRLWNVKTGECVKVWEFPTAVKRVEFSPDGSKVLAV 111
Query: 206 D----G--STVKFWDANHFGLVK------SYNMPCTIESASLEP-KYGNKFV-AGGEDMW 251
G T+ D N+ G S + CT A++ Y K++ AG ED
Sbjct: 112 TEKRMGFLGTIAVLDINYDGDFTNQAEEPSLRITCTESKATVAGWSYLGKYIIAGHEDGS 171
Query: 252 VRFFDFHTGNEIACNKGHH--GPVHCVRFSPGGESYASGSEDGTIRI 296
V +D TG ++ + H ++ ++FSP + + S+D + ++
Sbjct: 172 VSQYDAKTGEQLENVQAHEFDHQINDLQFSPDRTHFLTASKDKSAKL 218
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 209 (78.6 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 73/278 (26%), Positives = 125/278 (44%)
Query: 29 PDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
P+G L SA D +L N G+ ++ T +GH GAV +T+ SAS D +
Sbjct: 77 PNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 87 VWDALTGDVLHSFE-HKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
VWD+ TG+ + + H V +C L+ TG + ++++D+ + A + ++
Sbjct: 136 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQN 193
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI- 202
V V + + I+S D +++WD+R ++ T+ + VT +S +G Y+
Sbjct: 194 TYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 203 TTADGSTVKFWDANHFG----LVKSY-----NMPCTIESASLEPKYGNKFVAGGEDMWVR 253
+ A +TV+ WD F V+ + N + S P G+K AG D +V
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPD-GSKIAAGSADRFVY 311
Query: 254 FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
+D + + GH G ++ V F P S S D
Sbjct: 312 VWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 168 (64.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 46/164 (28%), Positives = 83/164 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++L Y+ DG L SAS D + + + ETG+ + +GH V SC
Sbjct: 108 GHSGAVMELHYNT---DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 74 LR-AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ + S D + K+WD + +F++ + V A +F++ + +++GG++ ++++DL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL- 223
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R + + SV ++ +LS D VR+WDVR
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD-NTVRVWDVR 266
Score = 149 (57.5 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 60/255 (23%), Positives = 103/255 (40%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDTHL 116
GH+G V+ C N ASA D +W+ D + + H V ++ D +
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + +K + ++D + R + V + ++ T +D G V+LWD+R
Sbjct: 125 LFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Query: 177 SGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESA-- 233
+QT + V + + I + + +K WD L +Y M +S
Sbjct: 184 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHADSVTG 241
Query: 234 -SLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGPVH-----CVR--FSPGGES 284
SL + G+ ++ D VR +D + C + G VH +R +SP G
Sbjct: 242 LSLSSE-GSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSK 300
Query: 285 YASGSEDGTIRIWQT 299
A+GS D + +W T
Sbjct: 301 IAAGSADRFVYVWDT 315
Score = 144 (55.7 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/204 (21%), Positives = 87/204 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ V C F + L + G ++++ ++++ + G+V + + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI--TTADGSTVKFWDANH 217
S TD V +WD +GE V+ L+ + V S ++ G + T +D TVK WD
Sbjct: 126 FSASTDKT-VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 218 FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR 277
++++ + + + ++ ++GG D ++ +D +GH V +
Sbjct: 185 KAAIQTFQNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 278 FSPGGESYASGSEDGTIRIWQTGP 301
S G S + D T+R+W P
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRP 267
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 210 (79.0 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 76/293 (25%), Positives = 128/293 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + ++ P G + + S D + L + ETG TF GH + + +
Sbjct: 132 GHRNVVYAIAFN--NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 74 LRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTH--LLLTGGMEKILRIFDL 131
A+ S D +AK+WD +G+ + + H+ S S DT ++TG + + ++D
Sbjct: 190 TVVATGSMDTTAKLWDIQSGEEVVTLTG-HLAEIISLSFDTSGDRIITGSFDHTVVVWDA 248
Query: 132 NRPDAPPREVDRSPGSVRTVAW-LHS-DQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP 189
+ R+V G ++ L S D +++ T + LWD SG+ V TL
Sbjct: 249 STG----RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDD 304
Query: 190 -VTSAEVSQDGRYITTA--DGSTVKFWDAN-HFGLVKSYNMPCTIESASLEPKYGNKFVA 245
+ + G+ I TA DG T + ++A + K I S P+ GN+ +
Sbjct: 305 EILDSCFDYTGKLIATASADG-TARVYNATTRKCITKLEGHEGEISKISFNPQ-GNRLLT 362
Query: 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
G D R +D TG + +GH + F+ G +GS+D + RIW+
Sbjct: 363 GSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 208 (78.3 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 79/301 (26%), Positives = 131/301 (43%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
V H P+ ++ + G I+ S D + + + +G+ + T EGH+ V++ +
Sbjct: 87 VLRAHILPLTNV---ALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 71 TN-ALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRI 128
+ A+ S D + K+W A TG H+F H + SF+ + ++ TG M+ ++
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKL 203
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQT---ILSTCTDMGGVRLWDVRSGEIVQTLE 185
+D+ + EV G + + L D + I++ D V +WD +G V TL
Sbjct: 204 WDIQSGE----EVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVV-VWDASTGRKVHTLI 258
Query: 186 TK-SPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNK 242
+ ++SA S D I T T WDA V + I + + Y K
Sbjct: 259 GHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFD--YTGK 316
Query: 243 FVA-GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW--QT 299
+A D R ++ T I +GH G + + F+P G +GS D T RIW QT
Sbjct: 317 LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Query: 300 G 300
G
Sbjct: 377 G 377
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 185 (70.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 55/184 (29%), Positives = 87/184 (47%)
Query: 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYITTA 205
S+ +A+ + I+ T D G +++WD+ SG + T E S VT+ + ++ G + TA
Sbjct: 345 SMNALAYSPDGKRIV-TAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTA 403
Query: 206 --DGSTVKFWDANHFGLVKSYNMPCTIESA--SLEPKYGNKFVAGGEDMW-VRFFDFHTG 260
DGS ++ WD + +++ P + + +++P G AG D + V + TG
Sbjct: 404 SLDGS-IRAWDLIRYRNFRTFTAPTRLSFSCMAVDPS-GEVVAAGSLDSFDVHIWSVQTG 461
Query: 261 NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANGTIGKVK 320
+ GH GPV V F+P G SGS D T RIW T +E L + V
Sbjct: 462 QLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWSVFNRTQT-SEPLQLQADVLSVA 520
Query: 321 VTAD 324
V D
Sbjct: 521 VRPD 524
Score = 138 (53.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 48/216 (22%), Positives = 95/216 (43%)
Query: 27 ITPDGFFL-ISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSA 85
I G +L ASK ++ ++ +I +GH ++ + + R +A+ D
Sbjct: 308 INKSGEWLAFGASKLGQLLVWEWQSESYILKQQGHFDSMNALAYSPDGKRIVTAADDGKL 367
Query: 86 KVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
KVWD +G + +F EH V AC F++ ++L T ++ +R +DL R +
Sbjct: 368 KVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPT 427
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYIT 203
S +A S + + + D V +W V++G+++ L + PV++ + DG +
Sbjct: 428 RLSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGGLLV 487
Query: 204 TAD-GSTVKFWDA-NHFGLVKSYNMPCTIESASLEP 237
+ T + W N + + + S ++ P
Sbjct: 488 SGSWDKTARIWSVFNRTQTSEPLQLQADVLSVAVRP 523
Score = 119 (46.9 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 42/158 (26%), Positives = 70/158 (44%)
Query: 56 TFEGHKGAVWSC-CLDTNALRAASASAD-FSAKVWDALTGDVLHSFE-HKHIVRACSFSE 112
TF +SC +D + A+ S D F +W TG +L H+ V A +F+
Sbjct: 422 TFTAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQTGQLLDQLSGHEGPVSAVAFAP 481
Query: 113 DTHLLLTGGMEKILRIFDL-NRPD-APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
D LL++G +K RI+ + NR + P ++ V +VA + D + L+ T G +
Sbjct: 482 DGGLLVSGSWDKTARIWSVFNRTQTSEPLQLQ---ADVLSVA-VRPDSSQLAVSTLDGQI 537
Query: 171 RLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGS 208
W V + V ++ + V+ D R A G+
Sbjct: 538 SFWSVTEAQQVSGVDGRRDVSGGRKITDRRTAANAGGT 575
Score = 77 (32.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 47/190 (24%), Positives = 71/190 (37%)
Query: 1 MDKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGH 60
+D K +P H + +V L +TP G L+S +D +L N I F
Sbjct: 43 VDNKSYTLPFA---HRKNIVRL---DLTPRGNLLLSVDEDGHAILTNVVRRISIYHFS-F 95
Query: 61 KGAVWSCCLDTNALRAASASADFSAKVW------DALTGD--------VLHSFEHKHI-- 104
+ AV + + R + +VW D+ TGD V H H
Sbjct: 96 RTAVTALSFSPSG-RHFAVGIGRRIEVWQVPQTPDSATGDDGLEFAPFVRHHSHAAHFDE 154
Query: 105 VRACSFSEDTHLLLTGGMEKILRIFDLNRPDA-PPREVDRSPGSVRTVAWLHSDQTILST 163
VR +S D+ L+ + RI+ LN+ + P + V AW DQ + T
Sbjct: 155 VRHIEWSRDSRFFLSASKDLTARIWSLNQEEGFTPTVLSGHRQGV-VGAWFSMDQETIYT 213
Query: 164 CTDMGGVRLW 173
+ G V W
Sbjct: 214 VSKDGAVFDW 223
Score = 44 (20.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 15/75 (20%), Positives = 32/75 (42%)
Query: 276 VRFSPGGESYASGSEDGTIRIWQTGPVTNDDTET---LTANGTIGKVKVTADEVSRKIEG 332
V F+P G ++ + S +G + V D + +T T+ ++ D + +
Sbjct: 681 VSFAPDGAAFCAASTEGLLIYSLDHTVQFDPFDLNMEITPASTLAVLENEKDYLKALVMA 740
Query: 333 FHIADEGKMKEKEEA 347
F + + G +K +A
Sbjct: 741 FRLNEAGLIKRVYQA 755
Score = 38 (18.4 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 259 TGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
T A N G H +++S G +G + ++ T
Sbjct: 564 TDRRTAANAGGTKAFHTIQYSMDGSCLIAGGNSKYMCLYST 604
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 206 (77.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 72/288 (25%), Positives = 124/288 (43%)
Query: 21 DLFYSPITPDGFFLISASKDSSPML-RNGETGDWIGTFEGHKGAVWSCCLDTNALRAASA 79
++F + P+G L+S+ D + + E + + GH GAV + +
Sbjct: 57 EIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTC 116
Query: 80 SADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE-DTHLLLTGGMEKILRIFDLNRPDAP 137
S D + WD TG F+ H + V + S LL +G ++ ++I+D + A
Sbjct: 117 STDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAA 176
Query: 138 PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVS 196
SP V V + + + ++S D V++WD+R ++ L S +T +S
Sbjct: 177 --HTLESPFQVTAVCFGDTGEQVISGGID-NEVKIWDIRKQAVLHHLRGHSDTITGMSLS 233
Query: 197 QDGRYI-TTADGSTVKFWDANHFG----LVK-----SYNMPCTIESASLEPKYGNKFVAG 246
+G +I T A +T++ WD + VK +N + + P +K +G
Sbjct: 234 PEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPG-SDKITSG 292
Query: 247 GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
D V +D +T + GH+G V+ V FSP SGS D T+
Sbjct: 293 SADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTL 340
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 43/204 (21%), Positives = 87/204 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ + F + LLL+ G ++ + I+ + + G+V A D +
Sbjct: 54 HEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVME-AHFTPDGSH 112
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI--TTADGSTVKFWDANH 217
+ TC+ + WD+ +G+ + + V S + S+ G+ + + +D T+K WDA
Sbjct: 113 IFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARK 172
Query: 218 FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR 277
+ P + + G + ++GG D V+ +D + +GH + +
Sbjct: 173 KHAAHTLESPFQVTAVCFGDT-GEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMS 231
Query: 278 FSPGGESYASGSEDGTIRIWQTGP 301
SP G+ + + D T+R+W P
Sbjct: 232 LSPEGDFILTNAMDNTLRVWDVRP 255
Score = 145 (56.1 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 59/253 (23%), Positives = 101/253 (39%)
Query: 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG--DVLHSFEHKHIVRACSFSEDTH 115
EGH+G +++ S+ D +W +V+ H V F+ D
Sbjct: 52 EGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGS 111
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGS-VRTVAWLHSDQTILSTCTDMGGVRLWD 174
+ T +K L +D+ R + G+ V +V Q +L + +D +++WD
Sbjct: 112 HIFTCSTDKTLAFWDIATGQRQRRF--KGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWD 169
Query: 175 VRSGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPC-TIES 232
R TLE+ VT+ G + + + VK WD ++ TI
Sbjct: 170 ARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITG 229
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFD---FHTGNE-IACNKGH-HG-PVHCVR--FSPGGES 284
SL P+ G+ + D +R +D + G + +GH H + +R +SPG +
Sbjct: 230 MSLSPE-GDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDK 288
Query: 285 YASGSEDGTIRIW 297
SGS D + IW
Sbjct: 289 ITSGSADRHVYIW 301
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 43/164 (26%), Positives = 73/164 (44%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++ + TPDG + + S D + + TG F+GH V S
Sbjct: 96 GHSGAVMEAHF---TPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRG 152
Query: 74 LRA-ASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ S S D + K+WDA H+ E V A F + +++GG++ ++I+D+
Sbjct: 153 QQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDI- 211
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R A + ++ ++ IL+ D +R+WDVR
Sbjct: 212 RKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMD-NTLRVWDVR 254
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 212 (79.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 63/243 (25%), Positives = 105/243 (43%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
GH + CC + + A++S D + K+WD GD + +FE H V +C++ + +
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFV 451
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
+ ++K +I+D+N + SV ++ + T+L++ D + +WD R+
Sbjct: 452 ASSSLDKTSKIWDVNSERCRCTLYGHTD-SVNSIEFFPFSNTLLTSSADKT-LSIWDART 509
Query: 178 GEIVQTLETKS-PVTSAEVSQDGRYITTADGSTV-KFWDANHFGLVKSYNM-PCTIESAS 234
G Q+L + A G I + D V K WD + S ++ P +
Sbjct: 510 GICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVN 569
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
+ A G + + D +G EI GH H V FS GE SG DGT+
Sbjct: 570 FDSSGRVLAQASGNGV-IHLLDLKSG-EIHKLMGHENEAHTVVFSHDGEILFSGGSDGTV 627
Query: 295 RIW 297
R W
Sbjct: 628 RTW 630
Score = 163 (62.4 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 59/208 (28%), Positives = 91/208 (43%)
Query: 5 KIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAV 64
K V L GH+ + D + P G L ++S D++ L + GD I TFEGH AV
Sbjct: 383 KCNVLLTGFGHTDWLSDCCFHP---SGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAV 439
Query: 65 WSCCLDTNALRAASASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGME 123
WSC + AS+S D ++K+WD + + + H V + F ++ LLT +
Sbjct: 440 WSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSAD 499
Query: 124 KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT 183
K L I+D R + + S+ + I S C G +LWD R + +
Sbjct: 500 KTLSIWDA-RTGICEQSLYGHMHSINDAIFDPRGHMIAS-CDACGVTKLWDFRKLLPIVS 557
Query: 184 LET-KSPVTSAEVSQDGRYITTADGSTV 210
++ SP GR + A G+ V
Sbjct: 558 IDIGPSPGNEVNFDSSGRVLAQASGNGV 585
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 210 (79.0 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 78/297 (26%), Positives = 133/297 (44%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
V H HS V + YS +G +L SASKD + ++ + + GH V
Sbjct: 208 VFHDHSDEVWQISYSH---NGRYLASASKDKTAIIFDVVNLKRVFRLIGHIDTVAYIRWS 264
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
+ S S D S +WDA TG+ L ++H V C + D +TG + + +
Sbjct: 265 PDDRYLLSCSCDKSVILWDAFTGEKLRDYKHGFSVSCCCWLPDGLSFITGSPDCHITHWS 324
Query: 131 LNRPDAPPRE----VDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET 186
LN E D + S T ++ + +++ D + ++ V + E ++ +
Sbjct: 325 LNGEILYKWEDVNIYDMALTSDGTKLYIVGFEQLINA-EDKH-IAIYSVETRECIKKISL 382
Query: 187 KSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNK--- 242
+S VTS +S+D +Y +T + T WD +V+ Y M + + + +G K
Sbjct: 383 QSKVTSICLSKDSKYALTNLEPHTTFLWDLEENRIVRQY-MGHKLGNFLIGSCFGGKDDT 441
Query: 243 FV-AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE-SYASGSEDGTIRIW 297
FV +G ED +R + +G +A GH V+ V ++P +AS +D T+RIW
Sbjct: 442 FVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRIW 498
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 214 (80.4 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 86/332 (25%), Positives = 152/332 (45%)
Query: 4 KKIAVPLVCHGHSRPVVD-LFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG 62
+ + P V GH V+ L +S G ++S S D++ + + G + T GH G
Sbjct: 982 RPVRKPKVLKGHDDHVITCLQFS-----GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTG 1036
Query: 63 AVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGG 121
VWS + N + S S D + KVWD +G +H+ + H VR C + ++ +G
Sbjct: 1037 GVWSSQMSGNII--ISGSTDRTLKVWDMDSGACVHTLQGHTSTVR-CMHLHGSKVV-SGS 1092
Query: 122 MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIV 181
+ LR++D+ + V +VR V + + I+S D V++W E +
Sbjct: 1093 RDATLRVWDIEQGSCLHVLVGHL-AAVRCVQY--DGKLIVSGAYDYM-VKIWHPERQECL 1148
Query: 182 QTLETKSP-VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPCTIESASLEPKY 239
TL+ + V S + DG ++ + T ++ WD G K M ++ +E +
Sbjct: 1149 HTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVET-GNCKHTLMGHQSLTSGMELRQ 1205
Query: 240 GNKFVAGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRI 296
N V+G D V+ +D TG + G HH V C++F+ + S+DGT+++
Sbjct: 1206 -NILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKL 1262
Query: 297 W--QTGPVTNDDTETLTANGTIGKV-KVTADE 325
W +TG + L + G+ G V ++ A++
Sbjct: 1263 WDVKTGDFIRN-LVALDSGGSGGVVWRIRAND 1293
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 74/272 (27%), Positives = 122/272 (44%)
Query: 31 GFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDA 90
G +IS S D + + + ++G + T +GH V C+ + + S S D + +VWD
Sbjct: 1045 GNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVR--CMHLHGSKVVSGSRDATLRVWDI 1102
Query: 91 LTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVR 149
G LH H VR + D L+++G + +++I+ R + + G
Sbjct: 1103 EQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQEC----LHTLQGHTN 1156
Query: 150 TVAWLHSDQT-ILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSA-EVSQDGRYITTADG 207
V L D ++S D +R+WDV +G TL +TS E+ Q+ AD
Sbjct: 1157 RVYSLQFDGLHVVSGSLDTS-IRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNAD- 1214
Query: 208 STVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGEDMWVRFFDFHTG----NE 262
STVK WD +++ + P SA ++ ++FV +D V+ +D TG N
Sbjct: 1215 STVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
Query: 263 IACNKGHHGPVHC-VRFSPGGESYASGSEDGT 293
+A + G G V +R + A GS +GT
Sbjct: 1275 VALDSGGSGGVVWRIRANDTKLICAVGSRNGT 1306
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 206 (77.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 71/267 (26%), Positives = 122/267 (45%)
Query: 29 PDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
P+G L SA D +L N G+ ++ T +GH GAV +T+ SAS D +
Sbjct: 76 PNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 134
Query: 87 VWDALTGDVLHSFE-HKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
VWD+ TG+ + + H V +C L+ TG + ++++D+ + A + ++
Sbjct: 135 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQN 192
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI- 202
V V + + I+S D +++WD+R ++ T+ + VT +S +G Y+
Sbjct: 193 TYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 251
Query: 203 TTADGSTVKFWDANHFG----LVKSY-----NMPCTIESASLEPKYGNKFVAGGEDMWVR 253
+ A +TV+ WD F VK + N + S P G+K AG D +V
Sbjct: 252 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-GSKIAAGSADRFVY 310
Query: 254 FFDFHTGNEIACNKGHHGPVHCVRFSP 280
+D + + GH G ++ V F P
Sbjct: 311 VWDTTSRRILYKLPGHAGSINEVAFHP 337
Score = 168 (64.2 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 46/164 (28%), Positives = 83/164 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++L Y+ DG L SAS D + + + ETG+ + +GH V SC
Sbjct: 107 GHSGAVMELHYNT---DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 74 LR-AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ + S D + K+WD + +F++ + V A +F++ + +++GG++ ++++DL
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL- 222
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R + + SV ++ +LS D VR+WDVR
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD-NTVRVWDVR 265
Score = 158 (60.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 73/297 (24%), Positives = 120/297 (40%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDTHL 116
GH+G V+ C N ASA D +W+ D + + H V ++ D +
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + +K + ++D + R + V + ++ T +D G V+LWD+R
Sbjct: 124 LFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 182
Query: 177 SGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESA-- 233
+QT + V + + I + + +K WD L +Y M +S
Sbjct: 183 KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHADSVTG 240
Query: 234 -SLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGPVH-----CVR--FSPGGES 284
SL + G+ ++ D VR +D + C K G VH +R +SP G
Sbjct: 241 LSLSSE-GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 299
Query: 285 YASGSEDGTIRIWQTGPVTNDDTETLTAN-GTIGKVKVTADEVSRKIE-GFHIADEG 339
A+GS D + +W T + L + G+I +V DE IE GFH +G
Sbjct: 300 IAAGSADRFVYVWDT--TSRRILYKLPGHAGSINEVAFHPDEPI--IETGFHRIGQG 352
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 213 (80.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 79/309 (25%), Positives = 134/309 (43%)
Query: 22 LFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASA 81
++++ + D + S D + + E+G+ + H + C + A+ SA
Sbjct: 617 VYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSA 676
Query: 82 DFSAKVWDALTGDVLHSFE-HKHIVRACSFSE--DTHLLLTGGMEKILRIFDLNRPDAPP 138
D K+W++ TG L+ +E H V C F+ +LL T + ++++DL D
Sbjct: 677 DKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLK--DKYC 734
Query: 139 RE-VDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQ 197
R + +V + +D I S TD G V+LW+V S ++T+E K +A+ Q
Sbjct: 735 RNTMFGHVNAVSHCRFSPNDDYIASCSTD-GTVKLWNVHSANELRTIEIKDFFRNADEQQ 793
Query: 198 DGRYIT------TADGSTVKFWDANH---FGLVKSYNMPCTIESASLEPKYGNKFVAGGE 248
D + + T+ N F + S + I S +Y + F AG E
Sbjct: 794 DDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCD-FCAGDE 852
Query: 249 DMWV-------RFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
+ V ++ + +++A +GH VHCV FS G + + SED TIRIW+T
Sbjct: 853 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 912
Query: 302 VTNDDTETL 310
V L
Sbjct: 913 VCKSSDAVL 921
Score = 170 (64.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 61/204 (29%), Positives = 95/204 (46%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + D + + L+S S D + + N TG F H+GAV SC + +
Sbjct: 1044 GHKEAIKDFAFL----ENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDG 1099
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
R +S SAD +AK+W + VLH + H+ VR +FS LL TG + +RI+D+
Sbjct: 1100 SRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDIL 1159
Query: 133 RPD----APPREVDRS-P---GSVRTVAWLHSDQTILSTCTDMGG-VRLWDVRSGEIVQT 183
+ VD P G V +++ + ++S+ GG ++ WDV +GE +QT
Sbjct: 1160 TGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSS----GGYLKWWDVTTGESLQT 1215
Query: 184 LETKSP-VTSAEVSQDGRYITTAD 206
T + S VS + T D
Sbjct: 1216 FYTNGTNLKSIHVSPNFDVYVTVD 1239
Score = 157 (60.3 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 65/293 (22%), Positives = 123/293 (41%)
Query: 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDT 71
C GH+ V + +S DG +++S+D + +R ET + + +
Sbjct: 877 CRGHTSWVHCVTFSS---DGSLFLTSSEDQT--IRIWETNKVCKSSDAVLKSELDVVFHN 931
Query: 72 NALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTG---GMEKILR 127
+ + ++ + T ++ E + ++ C SED G G K+LR
Sbjct: 932 GEVMILAIYNQKHIQLINGNTDSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKVLR 991
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187
+ D R RE R+ SV+ + QT++S+ D +++W+ + E V K
Sbjct: 992 LLD-GRV-LTSREAYRT--SVQHCRFTTDCQTLISSAHD-AVIQVWNWQLNECVFLKGHK 1046
Query: 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPC---TIESASLEPKYGNKFV 244
+ ++ + ++ + TVK W+ K + C + S ++ P G++F
Sbjct: 1047 EAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDF--ACHRGAVLSCAVSPD-GSRFS 1103
Query: 245 AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ D + + F + + + KGH V C FSP + A+G + G IRIW
Sbjct: 1104 STSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1156
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 213 (80.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 79/309 (25%), Positives = 134/309 (43%)
Query: 22 LFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASA 81
++++ + D + S D + + E+G+ + H + C + A+ SA
Sbjct: 618 VYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILCCTFSADDKYVATCSA 677
Query: 82 DFSAKVWDALTGDVLHSFE-HKHIVRACSFSE--DTHLLLTGGMEKILRIFDLNRPDAPP 138
D K+W++ TG L+ +E H V C F+ +LL T + ++++DL D
Sbjct: 678 DKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLK--DKYC 735
Query: 139 RE-VDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQ 197
R + +V + +D I S TD G V+LW+V S ++T+E K +A+ Q
Sbjct: 736 RNTMFGHVNAVSHCRFSPNDDYIASCSTD-GTVKLWNVHSANELRTIEIKDFFRNADEQQ 794
Query: 198 DGRYIT------TADGSTVKFWDANH---FGLVKSYNMPCTIESASLEPKYGNKFVAGGE 248
D + + T+ N F + S + I S +Y + F AG E
Sbjct: 795 DDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCD-FCAGDE 853
Query: 249 DMWV-------RFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
+ V ++ + +++A +GH VHCV FS G + + SED TIRIW+T
Sbjct: 854 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 913
Query: 302 VTNDDTETL 310
V L
Sbjct: 914 VCKSSDAVL 922
Score = 170 (64.9 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 61/204 (29%), Positives = 95/204 (46%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + D + + L+S S D + + N TG F H+GAV SC + +
Sbjct: 1045 GHKEAIKDFAFL----ENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDG 1100
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
R +S SAD +AK+W + VLH + H+ VR +FS LL TG + +RI+D+
Sbjct: 1101 SRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDIL 1160
Query: 133 RPD----APPREVDRS-P---GSVRTVAWLHSDQTILSTCTDMGG-VRLWDVRSGEIVQT 183
+ VD P G V +++ + ++S+ GG ++ WDV +GE +QT
Sbjct: 1161 TGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSS----GGYLKWWDVTTGESLQT 1216
Query: 184 LETKSP-VTSAEVSQDGRYITTAD 206
T + S VS + T D
Sbjct: 1217 FYTNGTNLKSIHVSPNFDVYVTVD 1240
Score = 157 (60.3 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 65/293 (22%), Positives = 123/293 (41%)
Query: 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDT 71
C GH+ V + +S DG +++S+D + +R ET + + +
Sbjct: 878 CRGHTSWVHCVTFSS---DGSLFLTSSEDQT--IRIWETNKVCKSSDAVLKSELDVVFHN 932
Query: 72 NALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTG---GMEKILR 127
+ + ++ + T ++ E + ++ C SED G G K+LR
Sbjct: 933 GEVMILAIYNQKHIQLINGNTDSIIMQTEPQESLICCCCLSEDLKFAAFGQENGAIKVLR 992
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187
+ D R RE R+ SV+ + QT++S+ D +++W+ + E V K
Sbjct: 993 LLD-GRV-LTSREAYRT--SVQHCRFTTDCQTLISSAHD-AVIQVWNWQLNECVFLKGHK 1047
Query: 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPC---TIESASLEPKYGNKFV 244
+ ++ + ++ + TVK W+ K + C + S ++ P G++F
Sbjct: 1048 EAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDF--ACHRGAVLSCAVSPD-GSRFS 1104
Query: 245 AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ D + + F + + + KGH V C FSP + A+G + G IRIW
Sbjct: 1105 STSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIW 1157
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 208 (78.3 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 73/305 (23%), Positives = 133/305 (43%)
Query: 21 DLFYSPITPDGFFLISASKDSSPMLRNGETGDWIG---TFEGHKGAVWSCCLDTNALRAA 77
++++ + +G +L S+SKD + ++ I T GH V + + +
Sbjct: 276 EVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVL 335
Query: 78 SASADFSAKVWDALTGDVLHSFEHKHIVR-ACSFSEDTHLLLTGGMEKILRIFDLNRPDA 136
+ A+ + WD +GD +H +E I +C + D ++ G ++ + ++DL+ +
Sbjct: 336 TCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREK 395
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVS 196
+ R+ V +A + ++S C D + L+D R + + +E + +TS +S
Sbjct: 396 ECWKGQRTQ-KVSDIAMTDDGKWLVSVCKD-SVISLFD-REATVERLIEEEDMITSFSLS 452
Query: 197 QDGRYI-TTADGSTVKFWDANHFG-LVKSY--NMPCTIESASLEPKYGNKFVAGG-EDMW 251
D +YI ++ W+ +V Y + S Y F+A G ED
Sbjct: 453 NDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQ 512
Query: 252 VRFFDFHTGNEIACNKGHHGPVHCVRFSPGG-ESYASGSEDGTIRIWQTGPVTNDDTETL 310
V + TG I GH G V+CV +SP AS S+DGTIRIW + + +
Sbjct: 513 VYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQQNQKKK 572
Query: 311 TANGT 315
G+
Sbjct: 573 LVQGS 577
Score = 155 (59.6 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 66/255 (25%), Positives = 117/255 (45%)
Query: 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWD-ALTGDVL--HSF--EHKHIVRACSFSE 112
E H VW N AS+S D +A +W+ + G + H+ HK ++ A +S
Sbjct: 271 ESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVI-AILWSP 329
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
D +LT G E+++R +D++ D ++ S + W Q I++ TD + +
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDCV-HMYEKGGISPISCGWYPDGQGIIAGMTDRS-ICM 387
Query: 173 WDV--RSGEIVQTLETKSPVTSAEVSQDGRY-ITTADGSTVKFWD--ANHFGLVKSYNMP 227
WD+ R E + T+ V+ ++ DG++ ++ S + +D A L++ +M
Sbjct: 388 WDLDGREKECWKGQRTQK-VSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDM- 445
Query: 228 CTIESASLEPKYGNKFVAGGE-DMWVRFFDFHTGNEIACN-KGHHGPVHCVRFSPGG--E 283
I S SL NK++ + +R ++ +I KGH +R GG +
Sbjct: 446 --ITSFSLSND--NKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQ 501
Query: 284 SY-ASGSEDGTIRIW 297
++ ASGSED + IW
Sbjct: 502 AFIASGSEDSQVYIW 516
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 212 (79.7 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 74/270 (27%), Positives = 124/270 (45%)
Query: 60 HKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLL 118
H AV+ C + R AS D + +V+ A TG+ L + H+ V C+FS D +
Sbjct: 622 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 681
Query: 119 TGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH-SDQTILSTCTDMGGVRLWDVRS 177
T ++K ++I++ + D V + + S +L+T + ++LWD+
Sbjct: 682 TCSVDKKVKIWN-SMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQ 740
Query: 178 GEIVQTL--ETKSPVTSAEVSQDGRYITT--ADGSTVKFWDANHFGLVKSYNMPCTIESA 233
E T+ T S V S D + + + ADG T+K WD KS N+ ++
Sbjct: 741 KECRNTMFGHTNS-VNHCRFSPDDKLLASCSADG-TLKLWDVKSANERKSINVKQFFLNS 798
Query: 234 SLEPKYGNKFV-------AGGEDMWV----RFFDFHTGN--EIACNKGHHGPVHCVRFSP 280
EP+ + + A G + V + F ++ + ++A +GH VHCV FSP
Sbjct: 799 E-EPQEDMEVIVKCCSWSADGTRIMVAAKNKIFLWNMDSCLKVADCRGHLSWVHCVMFSP 857
Query: 281 GGESYASGSEDGTIRIWQTGPVTNDDTETL 310
G S+ + S+D TIR+W+T V + L
Sbjct: 858 DGSSFLTSSDDQTIRLWETKKVCKNSAIVL 887
Score = 202 (76.2 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 49/186 (26%), Positives = 95/186 (51%)
Query: 17 RPVVD-LFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALR 75
RP D ++++ + DG + S D + + ETG+ + + H+ V C T+
Sbjct: 620 RPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRF 679
Query: 76 AASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLL--TGGMEKILRIFDLN 132
A+ S D K+W+++TG ++H + EH V C F+ ++H LL T + L+++DLN
Sbjct: 680 IATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLN 739
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
+ + + SV + D+ +L++C+ G ++LWDV+S +++ K +
Sbjct: 740 QKECRNTMFGHT-NSVNHCRFSPDDK-LLASCSADGTLKLWDVKSANERKSINVKQFFLN 797
Query: 193 AEVSQD 198
+E Q+
Sbjct: 798 SEEPQE 803
Score = 156 (60.0 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 54/193 (27%), Positives = 93/193 (48%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + V + + T DG LIS+S DSS + N ++ +++ + H+ V L N+
Sbjct: 966 GHKKTVRHIQF---TDDGKTLISSSDDSSIQVWNWQSEEYV-FLQAHQETVKDFKLLKNS 1021
Query: 74 LRAASASADFSAK-VWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
+ S S D + K +W +TG + F H+ V +C S D + +K +I+
Sbjct: 1022 -KLLSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSF 1080
Query: 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVT 191
+P E+ G VR + D T+L+T D G +R+W+V +GE+ L +P+
Sbjct: 1081 ELL-SPLHELRGHKGCVRCSVF-SVDSTLLATGDDNGEIRIWNVSNGEL---LHLCAPIL 1135
Query: 192 SAE-VSQDGRYIT 203
E + G ++T
Sbjct: 1136 VEEGAATHGGWVT 1148
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 46/208 (22%), Positives = 89/208 (42%)
Query: 92 TGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTV 151
TG + + E + V C S + GG + + I +L + +VR +
Sbjct: 918 TGQIDYLIEAQ--VSCCCLSPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKK-TVRHI 974
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-DGSTV 210
+ +T++S+ D +++W+ +S E V + V ++ ++ + ++ + DG+
Sbjct: 975 QFTDDGKTLISSSDD-SSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSFDGTVK 1033
Query: 211 KFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
K W + K + T+ S + P KF + D + + F + + +GH
Sbjct: 1034 KIWSIITGRIEKDFVCHQDTVLSCDISPD-ATKFSSTSADKTAKIWSFELLSPLHELRGH 1092
Query: 270 HGPVHCVRFSPGGESYASGSEDGTIRIW 297
G V C FS A+G ++G IRIW
Sbjct: 1093 KGCVRCSVFSVDSTLLATGDDNGEIRIW 1120
Score = 130 (50.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 48/159 (30%), Positives = 71/159 (44%)
Query: 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTH 115
F H+ V SC + +A + +S SAD +AK+W LH HK VR FS D+
Sbjct: 1047 FVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDST 1106
Query: 116 LLLTGGMEKILRIFDLNRPD-----AP--PREVDRSPGSVRTVAWLHSDQTILSTCTDMG 168
LL TG +RI++++ + AP E + G T D +L + G
Sbjct: 1107 LLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAG--G 1164
Query: 169 GVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTAD 206
++ W+V +GE QT T + VS D + T D
Sbjct: 1165 YLKWWNVVTGESSQTFYTNGTCLKKIHVSSDFKTYVTVD 1203
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 211 (79.3 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 62/259 (23%), Positives = 117/259 (45%)
Query: 17 RPVVD-LFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALR 75
RP D ++++ + DG + S D + + ETG+ + + H+ V C T+
Sbjct: 612 RPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRF 671
Query: 76 AASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTH--LLLTGGMEKILRIFDLN 132
A+ S D K+W+++TG+++H++ EH V C F+ +H LL TG + L+++DLN
Sbjct: 672 IATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLN 731
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS---- 188
+ + + SV + D+ +L++C+ G ++LWD S +++ K
Sbjct: 732 QKECRNTMFGHT-NSVNHCRFSPDDK-LLASCSADGTLKLWDATSANERKSINVKQFFLN 789
Query: 189 ---PVTSAEV-------SQDGRYITTADGSTVKFWDANHFGLVKSYNMPCT-IESASLEP 237
P EV S DG I A + + W+ + V + + P
Sbjct: 790 LEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLWNTDSRSKVADCRGHLSWVHGVMFSP 849
Query: 238 KYGNKFVAGGEDMWVRFFD 256
G+ F+ +D +R ++
Sbjct: 850 D-GSSFLTSSDDQTIRLWE 867
Score = 211 (79.3 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 76/269 (28%), Positives = 125/269 (46%)
Query: 60 HKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLL 118
H AV+ C + R AS AD + +V+ A TG+ L + H+ V C+FS D +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 673
Query: 119 TGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQ-TILSTCTDMGGVRLWDVRS 177
T ++K ++I++ + D V + +S +L+T + ++LWD+
Sbjct: 674 TCSVDKKVKIWNSMTGELV-HTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQ 732
Query: 178 GEIVQTL--ETKSPVTSAEVSQDGRYITT--ADGSTVKFWDANHFGLVKSYNMP---CTI 230
E T+ T S V S D + + + ADG T+K WDA KS N+ +
Sbjct: 733 KECRNTMFGHTNS-VNHCRFSPDDKLLASCSADG-TLKLWDATSANERKSINVKQFFLNL 790
Query: 231 ESASLEPKYGNK---FVAGGEDMWV----RFFDFHTGN--EIACNKGHHGPVHCVRFSPG 281
E + + K + A G + V + F ++T + ++A +GH VH V FSP
Sbjct: 791 EDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLWNTDSRSKVADCRGHLSWVHGVMFSPD 850
Query: 282 GESYASGSEDGTIRIWQTGPVTNDDTETL 310
G S+ + S+D TIR+W+T V + L
Sbjct: 851 GSSFLTSSDDQTIRLWETKKVCKNSAVML 879
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 201 (75.8 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 72/282 (25%), Positives = 127/282 (45%)
Query: 29 PDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
P+G L S+ D ++ N G+ ++ T +GH GAV +T+ SAS D +
Sbjct: 66 PNGATLASSGYDRLILMWNVYGDCENY-ATLKGHSGAVMELHYNTDGSLLFSASTDKTVC 124
Query: 87 VWDALTGDVLHSFE-HKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
VWD+ TG+ + + H V +C L TG + ++++D+ + + ++
Sbjct: 125 VWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASV--HTFQN 182
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI- 202
V +V + + I+S D +++WD+R +++ +++ VT +S DG Y+
Sbjct: 183 TYQVLSVTFNDTSDQIISGGID-NDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL 241
Query: 203 TTADGSTVKFWDANHFG----LVKSYNMPC-TIESASLEPKY---GNKFVAGGEDMWVRF 254
+ + ++V+ WD F VK + E L + G+K AG D +V
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYI 301
Query: 255 FDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296
+D T + GH G V+ V F P SGS D + I
Sbjct: 302 WDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
Score = 173 (66.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 46/164 (28%), Positives = 85/164 (51%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++L Y+ DG L SAS D + + + ETG+ + +GH V SC
Sbjct: 97 GHSGAVMELHYNT---DGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRG 153
Query: 74 LR-AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ A + S D + K+WD +H+F++ + V + +F++ + +++GG++ ++++DL
Sbjct: 154 PQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDL- 212
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R + + SV ++ +LS D VR+WD+R
Sbjct: 213 RQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMD-NSVRVWDIR 255
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 46/204 (22%), Positives = 87/204 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ V C F + L + G ++++ ++++ + G+V + + +
Sbjct: 55 HEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLL 114
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI--TTADGSTVKFWDANH 217
S TD V +WD +GE V+ L+ + V S ++ G + T +D TVK WD
Sbjct: 115 FSASTDKT-VCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRK 173
Query: 218 FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR 277
V ++ + S + ++ ++GG D ++ +D I +GH V +
Sbjct: 174 KASVHTFQNTYQVLSVTFNDT-SDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLS 232
Query: 278 FSPGGESYASGSEDGTIRIWQTGP 301
S G S S D ++R+W P
Sbjct: 233 LSADGSYLLSNSMDNSVRVWDIRP 256
Score = 141 (54.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 61/254 (24%), Positives = 98/254 (38%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE---HKHIVRACSFSEDTH 115
GH+G V+ C N AS+ D +W+ GD + H V ++ D
Sbjct: 54 GHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHYNTDGS 112
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL + +K + ++D + R + V + + T +D G V+LWD+
Sbjct: 113 LLFSASTDKTVCVWDSETGERVKR-LKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDI 171
Query: 176 RSGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYN-MPCTIESA 233
R V T + V S + I + + +K WD L+ S ++
Sbjct: 172 RKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGL 231
Query: 234 SLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGPVH-----CVR--FSPGGESY 285
SL G+ ++ D VR +D + C K G VH +R +S G
Sbjct: 232 SLSAD-GSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKI 290
Query: 286 ASGSEDGTIRIWQT 299
A+GS D + IW T
Sbjct: 291 AAGSADRFVYIWDT 304
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 203 (76.5 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 69/262 (26%), Positives = 114/262 (43%)
Query: 49 ETGDWIGTFEGHKGAVWS-CCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVR 106
E D + TF GHKG +++ C T+A A+ D A +W GD HK V
Sbjct: 58 ENDDSVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVS 117
Query: 107 ACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGS-VRTVAWLHSDQTILSTCT 165
+FS D LL +GG++ +++IFD + + V PG+ + V W +L+
Sbjct: 118 CLAFSYDGQLLASGGLDGVVQIFDAS--SGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSE 175
Query: 166 DMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITT-ADGSTVKFWD---ANHFGL 220
D + +W+ + + VT + + DG+ I T +D +++ W+ +
Sbjct: 176 DCS-LWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHI 234
Query: 221 VKSYNMPCTIESASLEPKYGNKFVA--GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRF 278
VK + P E + N +A G +D V + TG ++ H V CV+F
Sbjct: 235 VKGH--PYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKF 292
Query: 279 SPGGESY---ASGSEDGTIRIW 297
SP + A+G D + IW
Sbjct: 293 SPSSATIPLAATGGMDKKLIIW 314
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 206 (77.6 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 77/317 (24%), Positives = 138/317 (43%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
V GH V+ I D L++ S D++ + + G+ + T GH G VW+ +
Sbjct: 250 VLRGHEDHVITCMQ--IHDD--VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQIS 305
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIF 129
S S D + KVW + G +LH+ + H VR + + +L+TG + LR++
Sbjct: 306 QCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVTGSRDTTLRVW 363
Query: 130 DLNRPDAPPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
D+ R + G V + D T++S D V++W+ +G ++TL +
Sbjct: 364 DVESG----RHLATLHGHHAAVRCVQFDGTTVVSGGYDFT-VKIWNAHTGRCIRTLTGHN 418
Query: 189 PVTSAEVSQDGRYITTADG--STVKFWDANHFGLVKSYNMPCTIES-ASLEPKY---GNK 242
+ + + R I + ++++ WD F + ++ SL GN
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWD---FTRPEGQECVALLQGHTSLTSGMQLRGNI 475
Query: 243 FVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW--QTG 300
V+ D VR +D H G + GH + +++ G A+ S+DGT+++W + G
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLWDIERG 534
Query: 301 PVTNDDTETLTANGTIG 317
+ D TL + G G
Sbjct: 535 ALIRD-LVTLDSGGNGG 550
Score = 164 (62.8 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 57/237 (24%), Positives = 101/237 (42%)
Query: 75 RAASAS----ADFSAKVWDA--LTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
RAA S AD K W+A + G + H++ +D +L+TG + L++
Sbjct: 223 RAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD--VLVTGSDDNTLKV 280
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
+ +++ + V + G V T + I+S TD V++W G ++ TL+ +
Sbjct: 281 WCIDKGEVMYTLVGHT-GGVWTSQISQCGRYIVSGSTDRT-VKVWSTVDGSLLHTLQGHT 338
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDAN---HFGLVKSYNMPCTIESASLEPKYGNKFVA 245
+T + +T++ WD H + ++ + + G V+
Sbjct: 339 STVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHH--AAVRCVQFD---GTTVVS 393
Query: 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ-TGP 301
GG D V+ ++ HTG I GH+ V+ + F SGS D +IR+W T P
Sbjct: 394 GGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRP 450
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 206 (77.6 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 77/317 (24%), Positives = 138/317 (43%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
V GH V+ I D L++ S D++ + + G+ + T GH G VW+ +
Sbjct: 250 VLRGHEDHVITCMQ--IHDD--VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQIS 305
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIF 129
S S D + KVW + G +LH+ + H VR + + +L+TG + LR++
Sbjct: 306 QCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVTGSRDTTLRVW 363
Query: 130 DLNRPDAPPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
D+ R + G V + D T++S D V++W+ +G ++TL +
Sbjct: 364 DVESG----RHLATLHGHHAAVRCVQFDGTTVVSGGYDFT-VKIWNAHTGRCIRTLTGHN 418
Query: 189 PVTSAEVSQDGRYITTADG--STVKFWDANHFGLVKSYNMPCTIES-ASLEPKY---GNK 242
+ + + R I + ++++ WD F + ++ SL GN
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWD---FTRPEGQECVALLQGHTSLTSGMQLRGNI 475
Query: 243 FVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW--QTG 300
V+ D VR +D H G + GH + +++ G A+ S+DGT+++W + G
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLWDIERG 534
Query: 301 PVTNDDTETLTANGTIG 317
+ D TL + G G
Sbjct: 535 ALIRD-LVTLDSGGNGG 550
Score = 164 (62.8 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 57/237 (24%), Positives = 101/237 (42%)
Query: 75 RAASAS----ADFSAKVWDA--LTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRI 128
RAA S AD K W+A + G + H++ +D +L+TG + L++
Sbjct: 223 RAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD--VLVTGSDDNTLKV 280
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS 188
+ +++ + V + G V T + I+S TD V++W G ++ TL+ +
Sbjct: 281 WCIDKGEVMYTLVGHT-GGVWTSQISQCGRYIVSGSTDRT-VKVWSTVDGSLLHTLQGHT 338
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDAN---HFGLVKSYNMPCTIESASLEPKYGNKFVA 245
+T + +T++ WD H + ++ + + G V+
Sbjct: 339 STVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHH--AAVRCVQFD---GTTVVS 393
Query: 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ-TGP 301
GG D V+ ++ HTG I GH+ V+ + F SGS D +IR+W T P
Sbjct: 394 GGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRP 450
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 209 (78.6 bits), Expect = 7.3e-14, P = 7.3e-14
Identities = 64/255 (25%), Positives = 122/255 (47%)
Query: 17 RPVVD-LFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALR 75
RP D ++++ + DG + S D + + ETG+ + + H+ V C +
Sbjct: 348 RPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRF 407
Query: 76 AASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDT-HLLL-TGGMEKILRIFDLN 132
A+ S D K+W+++TG+++ S+ EH V C F+ ++ HLLL TG + L+++DLN
Sbjct: 408 IATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLN 467
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS 192
+ + + SV + D+ +L++C+ G ++LWDV+S +++ K +
Sbjct: 468 QKECRNTMFGHT-NSVSHCRFSPDDK-LLASCSADGTLKLWDVKSANERKSINVKQFFLN 525
Query: 193 AEVSQDGRYITTADGSTVKFWDANHFGLV---KSYNMPCTIESASLEPKYGNKFVAGGED 249
+E SQ+ + S W A+ LV K+ + I + L + + G
Sbjct: 526 SEESQEDMEVMVKCCS----WSADGASLVVAAKNKVLLFNIHTGGLLAE-----IHTGHH 576
Query: 250 MWVRFFDFHTGNEIA 264
+++ DF N +A
Sbjct: 577 STIQYCDFSPSNHLA 591
Score = 177 (67.4 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 62/226 (27%), Positives = 111/226 (49%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
T DG +IS+S DS+ + N ++ + + + + H+ V L N+ R S S D + KV
Sbjct: 757 TTDGKNVISSSDDSAIQVWNWQSEETV-SLQAHQETVKDFRLLKNS-RLLSWSFDGTVKV 814
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRI--FDLNRPDAPPREVDRS 144
W+ +TG + F H+ V +C S D + +K +I FDL +P E+
Sbjct: 815 WNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLL---SPLHELRGH 871
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-----LETKSP-----VTSAE 194
G VR A+ D T+L+T D G +R+W+V +GE++ + +E + VT
Sbjct: 872 KGCVRCSAF-SVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLR 930
Query: 195 VSQDGRYITTADGSTVKFWDANHFGLVKS-YNMPCTIESASLEPKY 239
S DG+ + +A G +K+W+ + +++ Y ++ + P +
Sbjct: 931 FSPDGKMLVSA-GGYLKWWNVDSGKSIQTFYTNGTNLKKIHVSPDF 975
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 64/240 (26%), Positives = 107/240 (44%)
Query: 60 HKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLL 118
H AV+ C + R AS AD + +V+ A TG+ L + H+ V C+FS D +
Sbjct: 350 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIA 409
Query: 119 TGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH-SDQTILSTCTDMGGVRLWDVRS 177
T ++K ++I++ + + D V + + S+ +L+T + ++LWD+
Sbjct: 410 TCSVDKKVKIWNSVTGELV-QSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQ 468
Query: 178 GEIVQTL--ETKSPVTSAEVSQDGRYITT--ADGSTVKFWDANHFGLVKSYNMP---CTI 230
E T+ T S V+ S D + + + ADG T+K WD KS N+
Sbjct: 469 KECRNTMFGHTNS-VSHCRFSPDDKLLASCSADG-TLKLWDVKSANERKSINVKQFFLNS 526
Query: 231 ESASLEPKYGNK---FVAGGEDMWVR------FFDFHTGNEIA-CNKGHHGPVHCVRFSP 280
E + + + K + A G + V F+ HTG +A + GHH + FSP
Sbjct: 527 EESQEDMEVMVKCCSWSADGASLVVAAKNKVLLFNIHTGGLLAEIHTGHHSTIQYCDFSP 586
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 54/183 (29%), Positives = 83/183 (45%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
L+S S D + + N TG F H+ V SC + +A + +S SAD +AK+W
Sbjct: 803 LLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLL 862
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD----APPREVDRSPGSV 148
LH HK VR +FS D+ LL TG +RI++++ + P V+ G+
Sbjct: 863 SPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEG--GAA 920
Query: 149 RTVAWLHSDQTIL---STCTDMGG-VRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYIT 203
W+ +D GG ++ W+V SG+ +QT T + VS D +
Sbjct: 921 THGGWV-TDLRFSPDGKMLVSAGGYLKWWNVDSGKSIQTFYTNGTNLKKIHVSPDFKTYV 979
Query: 204 TAD 206
T D
Sbjct: 980 TVD 982
Score = 132 (51.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 37/156 (23%), Positives = 70/156 (44%)
Query: 143 RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYI 202
R +VR + + + ++S+ D +++W+ +S E V + V + ++ R +
Sbjct: 746 RHKNTVRHIQFTTDGKNVISSSDD-SAIQVWNWQSEETVSLQAHQETVKDFRLLKNSRLL 804
Query: 203 TTADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN 261
+ + TVK W+ + K + T+ S + P KF + D + + F +
Sbjct: 805 SWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPD-ATKFSSTSADKTAKIWSFDLLS 863
Query: 262 EIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ +GH G V C FS A+G ++G IRIW
Sbjct: 864 PLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIW 899
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 206 (77.6 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 62/229 (27%), Positives = 109/229 (47%)
Query: 81 ADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPRE 140
A F+ V L D++H+ +H+ +V FS D + TG + +IFD+N +
Sbjct: 278 AIFNQAVPRVLDVDLVHTLQHESVVCCVRFSADGKYVATG-CNRSAQIFDVNTGEKVCVL 336
Query: 141 VDRSPGS-----VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI-VQTLETKSPVTSAE 194
D + + +R+V + D L+T + +R+WD+ + I +Q + + S +
Sbjct: 337 QDDNADTTGDLYIRSVCF-SPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLD 395
Query: 195 VSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGE-DMWV 252
++DGR I + G TV+ WD + + + + + + ++ P K+VA G D V
Sbjct: 396 FARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDGVTTVAISPD--TKYVAAGSLDKSV 453
Query: 253 RFFDFHTG---NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
R +D G + GH V+ V FSP G +GS D TI++W+
Sbjct: 454 RVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWE 502
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 58/257 (22%), Positives = 112/257 (43%)
Query: 21 DLFYSPI--TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAAS 78
DL+ + +PDG +L + ++D + + T F GH+ ++S + AS
Sbjct: 346 DLYIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIAS 405
Query: 79 ASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP 138
S D + ++WD G L F + V + S DT + G ++K +R++DL + P
Sbjct: 406 GSGDRTVRLWDIENGTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQ-GCPV 464
Query: 139 REVDRSPG---SVRTVAWLHSDQTILSTCTDMGGVRLWDV------------RSGEIVQT 183
++ G SV +VA+ + + +++ D ++LW++ + G V+T
Sbjct: 465 ERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKT-IKLWELATPRGNMQNQGSKGGRCVKT 523
Query: 184 LET-KSPVTSAEVSQDGRYITTADGST-VKFWDANHFGL-VKSYNMPCTIESASLEPKYG 240
E + V S ++ D +++ + V+FWD + ++ S + P G
Sbjct: 524 FEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPT-G 582
Query: 241 NKFVAGGEDMWVRFFDF 257
F G DM R + +
Sbjct: 583 GFFATGSGDMRARIWSY 599
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 200 (75.5 bits), Expect = 7.7e-14, P = 7.7e-14
Identities = 79/302 (26%), Positives = 129/302 (42%)
Query: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPML-R-NGETGDWIGTFEGHKGAVWSC 67
++ GH V + ++P G + S S D L R +G+ +++ +GHK A+
Sbjct: 47 MLLSGHPSAVYTMKFNPA---GTLIASGSHDREIFLWRVHGDCKNFM-VLKGHKNAILDL 102
Query: 68 CLDTNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSE-DTHLLLTGGMEKI 125
++ + SAS D + + WD TG + EH V +C + L+++G +
Sbjct: 103 HWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGT 162
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE 185
+++D+ + A D+ + V++ + I + D V++WD+R GE TLE
Sbjct: 163 AKLWDMRQRGAIQTFPDKY--QITAVSFSDAADKIFTGGVD-NDVKVWDLRKGEATMTLE 219
Query: 186 T-KSPVTSAEVSQDGRYITTADGSTVKF--WDANHFG----LVK-----SYNMPCTIESA 233
+ +T +S DG Y+ T +G K WD + VK +N +
Sbjct: 220 GHQDTITGMSLSPDGSYLLT-NGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKC 278
Query: 234 SLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVH-CVRFSPGGESYASGSEDG 292
S P G K AG D V +D + I GH G V+ CV F P S S D
Sbjct: 279 SWSPD-GTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECV-FHPTEPIIGSCSSDK 336
Query: 293 TI 294
I
Sbjct: 337 NI 338
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 65/280 (23%), Positives = 107/280 (38%)
Query: 36 SASKDSSPMLRNGETG--DWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
SAS+ P +N + I GH AV++ + AS S D +W + G
Sbjct: 26 SASQGPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW-RVHG 84
Query: 94 DVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRT 150
D + HK+ + ++ D +++ +K +R +D+ + + S V +
Sbjct: 85 DCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS-SFVNS 143
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTAD-GST 209
++ + +D G +LWD+R +QT K +T+ S I T +
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDND 203
Query: 210 VKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNK 267
VK WD + TI SL P G+ + G D + +D + C K
Sbjct: 204 VKVWDLRKGEATMTLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDMRPYAPQNRCVK 262
Query: 268 GHHGPVH--------CVRFSPGGESYASGSEDGTIRIWQT 299
G H C +SP G +GS D + IW T
Sbjct: 263 IFEGHQHNFEKNLLKC-SWSPDGTKVTAGSSDRMVHIWDT 301
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 39/152 (25%), Positives = 63/152 (41%)
Query: 153 WLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGR--YITTADGST 209
W I+S D VR WDV +G+ ++ + E S V S ++ G I+ +D T
Sbjct: 104 WTSDGSQIVSASPDKT-VRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGT 162
Query: 210 VKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
K WD G ++++ I + S +K GG D V+ +D G +GH
Sbjct: 163 AKLWDMRQRGAIQTFPDKYQITAVSFSDA-ADKIFTGGVDNDVKVWDLRKGEATMTLEGH 221
Query: 270 HGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
+ + SP G + D + +W P
Sbjct: 222 QDTITGMSLSPDGSYLLTNGMDNKLCVWDMRP 253
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 201 (75.8 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 73/278 (26%), Positives = 123/278 (44%)
Query: 29 PDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
P G L SA D +L N G+ ++ T +GH GAV +T+ SAS D +
Sbjct: 103 PWGNTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 161
Query: 87 VWDALTGDVLHSFE-HKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
VWD+ TG+ + + H V +C L+ TG + ++++D+ + A + ++
Sbjct: 162 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAV--QTFQN 219
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI- 202
V V + + I+S D +++WD+R ++ T+ + VT +S +G Y+
Sbjct: 220 TYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 278
Query: 203 TTADGSTVKFWDANHFG----LVKSY-----NMPCTIESASLEPKYGNKFVAGGEDMWVR 253
+ A +TV+ WD F VK + N + S P G+K G D +V
Sbjct: 279 SNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-GSKIAGGSADRFVY 337
Query: 254 FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
+D + + GH G V+ + F P S S D
Sbjct: 338 VWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSD 375
Score = 168 (64.2 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 46/164 (28%), Positives = 83/164 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++L Y+ DG L SAS D + + + ETG+ + +GH V SC
Sbjct: 134 GHSGAVMELHYNT---DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 190
Query: 74 LR-AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ + S D + K+WD + +F++ + V A +F++ + +++GG++ ++++DL
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL- 249
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R + + SV ++ +LS D VR+WDVR
Sbjct: 250 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD-NTVRIWDVR 292
Score = 143 (55.4 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 45/204 (22%), Positives = 87/204 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ V C F + L + G ++++ ++++ + G+V + + +
Sbjct: 92 HEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSML 151
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI--TTADGSTVKFWDANH 217
S TD V +WD +GE V+ L+ + V S ++ G + T +D TVK WD
Sbjct: 152 FSASTDKT-VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 210
Query: 218 FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR 277
V+++ + + + ++ ++GG D ++ +D +GH V +
Sbjct: 211 KAAVQTFQNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 269
Query: 278 FSPGGESYASGSEDGTIRIWQTGP 301
S G S + D T+RIW P
Sbjct: 270 LSSEGSYLLSNAMDNTVRIWDVRP 293
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 61/255 (23%), Positives = 101/255 (39%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDTHL 116
GH+G V+ C ASA D +W+ D + + H V ++ D +
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 150
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + +K + ++D + R + V + ++ T +D G V+LWD+R
Sbjct: 151 LFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 209
Query: 177 SGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESA-- 233
VQT + V + + I + + +K WD L +Y M +S
Sbjct: 210 KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHADSVTG 267
Query: 234 -SLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGPVH-----CVR--FSPGGES 284
SL + G+ ++ D VR +D + C K G VH +R +SP G
Sbjct: 268 LSLSSE-GSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 326
Query: 285 YASGSEDGTIRIWQT 299
A GS D + +W T
Sbjct: 327 IAGGSADRFVYVWDT 341
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 202 (76.2 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 67/270 (24%), Positives = 116/270 (42%)
Query: 29 PDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW 88
P ++SAS+D++ + + E+G++ T +GH AV D AS SAD + K+W
Sbjct: 116 PSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLW 175
Query: 89 DALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGS 147
D T D + + H H V F+ L++ +K +++++ V
Sbjct: 176 DFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDW- 234
Query: 148 VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADG 207
VR + + D + +++C++ ++ W++ GE + T S V I G
Sbjct: 235 VRKIT-VSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIP-G 292
Query: 208 STVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK 267
S + + G K P +L + G G D ++ ++ TG +A
Sbjct: 293 SLLSTPE----GKSKVKQGP----GGNLVGQCGY-LATGSRDKTIKIWELATGRCLATYI 343
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
GH V VRF P G+ S +D TIR+W
Sbjct: 344 GHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 60/241 (24%), Positives = 107/241 (44%)
Query: 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTN 72
HGH V + + TP G LIS+S+D + + TG I T GH+ V + +
Sbjct: 187 HGHDHNVSCVRF---TPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSED 243
Query: 73 ALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
AS S D + K W+ + G+ L ++ EH H+V +FS + + G + L
Sbjct: 244 GSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSL--------L 295
Query: 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LETKSPV 190
+ P+ + V + PG L L+T + +++W++ +G + T + + V
Sbjct: 296 STPEGKSK-VKQGPGGN-----LVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWV 349
Query: 191 TSAEVSQDGRYI-TTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGE 248
+ G+++ + D T++ WD +K+ N T + L+ N +A GG
Sbjct: 350 RAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGV 409
Query: 249 D 249
D
Sbjct: 410 D 410
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 34/127 (26%), Positives = 63/127 (49%)
Query: 202 ITTADGSTVKFWD--ANHFG-LVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258
++ ++ +T+K WD + F +K + ++ + K GN + D+ ++ +DF
Sbjct: 122 VSASEDATIKVWDFESGEFERTLKGHTN--AVQDIDFD-KTGNLLASCSADLTIKLWDFQ 178
Query: 259 TGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANGT-IG 317
T + + GH V CVRF+P G+ S S D TI++W+ T +TL + +
Sbjct: 179 TYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA--TGYCIKTLVGHEDWVR 236
Query: 318 KVKVTAD 324
K+ V+ D
Sbjct: 237 KITVSED 243
Score = 135 (52.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 34/146 (23%), Positives = 65/146 (44%)
Query: 155 HSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGS-TVKF 212
H +++ + ++ +++WD SGE +TL+ + V + + G + + T+K
Sbjct: 115 HPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKL 174
Query: 213 WDANHFGLVKS-YNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHG 271
WD + VK+ + + P G++ ++ D ++ ++ TG I GH
Sbjct: 175 WDFQTYDCVKTLHGHDHNVSCVRFTPS-GDQLISSSRDKTIKVWEAATGYCIKTLVGHED 233
Query: 272 PVHCVRFSPGGESYASGSEDGTIRIW 297
V + S G AS S D TI+ W
Sbjct: 234 WVRKITVSEDGSCIASCSNDQTIKTW 259
Score = 124 (48.7 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/159 (23%), Positives = 75/159 (47%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
GH+ + S + SAS D + KVWD +G+ + + H + V+ F + +LL
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
+ + ++++D D + + +V V + S ++S+ D +++W+ +
Sbjct: 164 ASCSADLTIKLWDFQTYDCV-KTLHGHDHNVSCVRFTPSGDQLISSSRDKT-IKVWEAAT 221
Query: 178 GEIVQTLETKSP-VTSAEVSQDGRYITT-ADGSTVKFWD 214
G ++TL V VS+DG I + ++ T+K W+
Sbjct: 222 GYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 205 (77.2 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 73/277 (26%), Positives = 116/277 (41%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
TP+G L++ + L NG T ++ + H +V + N + K
Sbjct: 155 TPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKY 214
Query: 88 WDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGS 147
W + +V HK +R SFS ++G + LRI+D R V R G+
Sbjct: 215 WQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMR--CQEERVLRGHGA 272
Query: 148 -VRTVAWLHSDQTILSTCTD-MGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT 204
V+ V W I+S D +++WD +SG + TL KS V + + +G ++ T
Sbjct: 273 DVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKWNDNGNWLVT 332
Query: 205 ADGS-TVKFWDANHFGL-VKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN 261
A +K +D + V+ + S S P + F +GG D + F++ T
Sbjct: 333 ASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDK 392
Query: 262 EIAC-NKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
EI C H V + + P G SGS D TI+ W
Sbjct: 393 EIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 140 (54.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 51/177 (28%), Positives = 77/177 (43%)
Query: 150 TVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTAD-G 207
T+AW + ++ T G LW+ + L+ V + S + ++ T D G
Sbjct: 151 TLAWTPEGRRLV-TGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHG 209
Query: 208 STVKFWDANHFGLVKSYNMPC-TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACN 266
VK+W +N VK Y I S P +KFV+G +D +R +DF E
Sbjct: 210 GYVKYWQSN-MNNVKMYQAHKEAIRGISFSPT-DSKFVSGSDDGTLRIWDFMRCQEERVL 267
Query: 267 KGHHGPVHCVRFSPGGESYASGSEDGT--IRIWQTGPVTNDDTETLTAN-GTIGKVK 320
+GH V CV + P SGS+D I+IW P + TL A+ T+ +K
Sbjct: 268 RGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWD--PKSGIALATLHAHKSTVMDLK 322
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 195 (73.7 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 60/246 (24%), Positives = 111/246 (45%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T EGH+ V S + N AAS+S D ++WD TG + S + + +FS D+
Sbjct: 59 TLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDS 118
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
+ TG + IF + +D + ++A+ + + S D G + ++D
Sbjct: 119 KYIATGSHLGKVNIFGVES-GKKEHSLDTRGKFILSIAYSPDGKYLASGAID-GIINIFD 176
Query: 175 VRSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCT-IE 231
+ +G+++ TLE + P+ S S D + + TA D +K +D H L + + + +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 236
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
S + P FV+ D ++ +D + + + H V V+++P G S +D
Sbjct: 237 SVAFSPD-DTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDD 295
Query: 292 GTIRIW 297
I I+
Sbjct: 296 RAIHIY 301
Score = 168 (64.2 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 60/253 (23%), Positives = 113/253 (44%)
Query: 60 HKGAVWSCCLDTNALRAA----SASADFSAKVWDALTG--DVLHSFE-HKHIVRACSFSE 112
H+ A+W+ + + + S D KVW ++ + E H+ V + + S+
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQ 74
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
+ + + ++ +R++DL + +D P TVA+ D ++T + +G V +
Sbjct: 75 NGAIAASSSLDAHIRLWDLET-GKQIKSMDAGPVDAWTVAF-SPDSKYIATGSHLGKVNI 132
Query: 173 WDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSYNM 226
+ V SG+ +L+T+ + S S DG+Y+ + DG + +D L+ + + M
Sbjct: 133 FGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEGHAM 191
Query: 227 PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYA 286
P I S + P V +D +++ +D N GH V V FSP +
Sbjct: 192 P--IRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFV 248
Query: 287 SGSEDGTIRIWQT 299
S S D +I++W T
Sbjct: 249 SSSSDKSIKVWDT 261
Score = 166 (63.5 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 56/257 (21%), Positives = 116/257 (45%)
Query: 4 KKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGA 63
+K+ + GH VV + I+ +G S+S D+ L + ETG I + +
Sbjct: 52 EKLELQWTLEGHQLGVVSV---NISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVD 108
Query: 64 VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHK-HIVRACSFSEDTHLLLTGGM 122
W+ ++ A+ S ++ +G HS + + + + ++S D L +G +
Sbjct: 109 AWTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAI 168
Query: 123 EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQ 182
+ I+ IFD+ ++ +R++ + D +L T +D G ++++DV+ +
Sbjct: 169 DGIINIFDIATGKLL-HTLEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 183 TLETK-SPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLVKSY-NMPCTIESASLEPKY 239
TL S V S S D +++++ ++K WD + V ++ + + S P
Sbjct: 227 TLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPT- 285
Query: 240 GNKFVAGGEDMWVRFFD 256
G+K V+ G+D + +D
Sbjct: 286 GSKIVSAGDDRAIHIYD 302
>DICTYBASE|DDB_G0285683 [details] [associations]
symbol:eif3I "eukaryotic translation initiation
factor 3 (eIF3) subunit I" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0285683 GO:GO:0045335
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000079 eggNOG:COG2319
GO:GO:0003743 GO:GO:0005852 KO:K03246 HAMAP:MF_03008 OMA:ATVAGWS
RefSeq:XP_638213.1 ProteinModelPortal:Q54MT0 STRING:Q54MT0
EnsemblProtists:DDB0233910 GeneID:8625261 KEGG:ddi:DDB_G0285683
ProtClustDB:CLSZ2728923 Uniprot:Q54MT0
Length = 331
Score = 196 (74.1 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 62/253 (24%), Positives = 123/253 (48%)
Query: 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
P+ H RP+ + ++ +G L A+KD L G+ IG+++ G V+S
Sbjct: 3 PISLRLHERPITQVLFNR---EGDLLFVAAKDKLVSLWYTTNGERIGSYQCG-GVVYSID 58
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSE-DTHLLLTG----GME 123
+ ++ +ASAD A+VWD +G L S + + R+ FS+ D +L+ G +
Sbjct: 59 VSQDSKYLITASADAKARVWDVSSGRQLDSTDFEVSARSIEFSQGDKQILVVTDQVMGCQ 118
Query: 124 KILRIFDLNRPDAPPREVDRS---PG---SVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
+ +FD ++ + R++++S P + W ++TI ++C D G VR++
Sbjct: 119 AKIHVFDFDKDEV--RKLNKSYTLPSPQCKITQATWGPLNKTIFASCED-GAVRIYCTEK 175
Query: 178 GEIVQT-LETKSPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLVKSYNMPCTIESASL 235
E+++T L+ VT E ++ ++T + T K +D L+++++ I +A +
Sbjct: 176 RELIKTILDHNKLVTRIEWTKHRIMFMTCSKDGTAKLYDTKTLKLLRTFDTGRPINAAGI 235
Query: 236 EPKYGNKFVAGGE 248
P + + GG+
Sbjct: 236 SPLKPHVILGGGQ 248
Score = 166 (63.5 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 43/164 (26%), Positives = 81/164 (49%)
Query: 148 VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LETKSPVTSAEVSQDG-RYITTA 205
+ W ++TI ++C D G VR++ E+++T L+ VT E ++ ++T +
Sbjct: 147 ITQATWGPLNKTIFASCED-GAVRIYCTEKRELIKTILDHNKLVTRIEWTKHRIMFMTCS 205
Query: 206 DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGED-------------MWV 252
T K +D L+++++ I +A + P + + GG+ V
Sbjct: 206 KDGTAKLYDTKTLKLLRTFDTGRPINAAGISPLKPHVILGGGQSAESVTTTKVDASQFKV 265
Query: 253 RFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296
RFF G E+ GH GPVH + F+P G+++A+G E+G +++
Sbjct: 266 RFFHIVYGEELGGLIGHIGPVHSICFTPDGKTFATGGEEGLVQV 309
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 194 (73.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 68/273 (24%), Positives = 120/273 (43%)
Query: 25 SPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFS 84
S +PDG L++AS D + ++G + GH+G V SCC + AS+S+D S
Sbjct: 32 SAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHS 91
Query: 85 AKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDR 143
++WD LH + H+ V SFS D+ L +GG +K ++++ V
Sbjct: 92 IRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGH 151
Query: 144 SPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIV---QTLETKSP-VTSAEVSQDG 199
S+++ + + ++ + D V +WD+R+ V LE + ++ S G
Sbjct: 152 CD-SIQSSDFSPTSDSLATGSWD-STVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG 209
Query: 200 RYITTADGSTVKFWD--ANHFGL-VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFD 256
+ + T+ W N+ L +K + + + S + P K + G V+ +D
Sbjct: 210 LLASGSWDKTICVWKPTTNNLPLQLKGHTI--WVNSLAFSPDE-LKLASAGYSRTVKVWD 266
Query: 257 FHTGNEIACNKGHHGPVHCVRFSPGGESYASGS 289
TG + KG H F+P G+ SG+
Sbjct: 267 CLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
Score = 161 (61.7 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 44/157 (28%), Positives = 74/157 (47%)
Query: 146 GSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT 204
G V A+ +T+L T +D G V +W +SG ++ L + PV S S DGR I +
Sbjct: 27 GEVNCSAFSPDGRTLL-TASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIAS 85
Query: 205 ADGS-TVKFWDANH---FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTG 260
+ +++ WD ++K + ++E+ S P + +GG D ++ +G
Sbjct: 86 SSSDHSIRLWDVARSKCLHVLKGHQR--SVETVSFSPD-SKQLASGGWDKRAIVWEVQSG 142
Query: 261 NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH + FSP +S A+GS D T+ IW
Sbjct: 143 RRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIW 179
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 200 (75.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 79/296 (26%), Positives = 127/296 (42%)
Query: 15 HSRPVVDLFYSPI--TPDG--FFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
H++P++ L + P+ PD + L S SKD++ + N + + T GH + +C
Sbjct: 219 HTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPI-TCVRW 277
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
S+S D + ++WDA G LH + H R HL L+ E +LR
Sbjct: 278 GGQNWIYSSSYDKTIRIWDAKDGKCLHILKG-HAARV------NHLSLS--TEHVLRSGA 328
Query: 131 LNRPDAPPREV--DRSPGSVRTVAWL-HSDQTILSTCTDMGGVRLWDVRSGE--IVQTLE 185
+ D P+ +R R A L S + ++S D+ + LWD + I +
Sbjct: 329 YDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLI-LWDPQKSTKPITKMHG 387
Query: 186 TKSPVTSAEVSQDGRYITTAD-GSTVKFWDAN--HFGLVKSYNMPCTIESA-SLEPKYGN 241
+ V A S DGR I TA S+V+ WD F ++ + A S + +
Sbjct: 388 HQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRL-- 445
Query: 242 KFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
V+ +D ++ +D + GH V V +SP G+ ASG D +RIW
Sbjct: 446 -LVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 178 (67.7 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 2 DKKKIAVPLV-CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGH 60
D +K P+ HGH + VV+ ++ +PDG + +AS DSS L +G+TG ++ T GH
Sbjct: 374 DPQKSTKPITKMHGHQK-VVN--HASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGH 430
Query: 61 KGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLT 119
AV+ C T++ S+S D + KVWD + + H+ V A +S D + +
Sbjct: 431 VAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVAS 490
Query: 120 GGMEKILRIF 129
GG +K +RI+
Sbjct: 491 GGADKAVRIW 500
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 73/309 (23%), Positives = 128/309 (41%)
Query: 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD-- 70
+GH ++ +SP T L++ S D + L + +T I T +GH W C+
Sbjct: 131 NGHDGTIISAQFSPSTSSR--LVTGSGDFTARLWDCDTQTPIATMKGHTN--WVSCVAWA 186
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFEHKH---IVRAC----SFSEDT--HLLLTGG 121
+A A+ S D + + WD G + +H I+ C + D+ +LL +G
Sbjct: 187 PDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGS 246
Query: 122 MEKILRIFDLN-RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI 180
+ +RI+++ R +P + V W I S+ D +R+WD + G+
Sbjct: 247 KDNTVRIWNVKLRTLLFTLSGHTAP--ITCVRW-GGQNWIYSSSYDKT-IRIWDAKDGKC 302
Query: 181 VQTLETKSP------VTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESAS 234
+ L+ + +++ V + G Y T D F D K C +S
Sbjct: 303 LHILKGHAARVNHLSLSTEHVLRSGAYDHT-DFKPKSFSDERR--KAKERYEACLKQS-- 357
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNE-IACNKGHHGPVHCVRFSPGGESYASGSEDGT 293
G + V+ +D+ + +D + I GH V+ FSP G A+ S D +
Sbjct: 358 -----GERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSS 412
Query: 294 IRIW--QTG 300
+R+W +TG
Sbjct: 413 VRLWDGKTG 421
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 194 (73.4 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 64/256 (25%), Positives = 107/256 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ +++ SAS D VWD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ GG++ I I+ L + R PG ++ D I+++ DM L
Sbjct: 110 SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMT-CAL 168
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSYNMP--- 227
WD+ +G+ + V S +S D R +I+ A ++ K WD G+ K P
Sbjct: 169 WDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRD-GMCKQ-TFPGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + + P GN F G +D R FD E+A H + C V FS G
Sbjct: 227 SDINAVAFFPS-GNAFATGSDDATCRLFDIRADQELAMYS--HDNIICGITSVAFSKSGR 283
Query: 284 SYASGSEDGTIRIWQT 299
+G +D +W +
Sbjct: 284 LLFAGYDDFNCNVWDS 299
Score = 151 (58.2 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 59/274 (21%), Positives = 107/274 (39%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT- 92
L+SAS+D ++ + T + + V +C + A D ++ T
Sbjct: 70 LVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTR 129
Query: 93 -GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV 148
G+V S E H + C F +D ++ + G + ++D+ + G V
Sbjct: 130 EGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSG-DMTCALWDIETGQQCTAFTGHT-GDV 187
Query: 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGR-YITTAD 206
+++ +T +S D +LWD+R G QT +S + + G + T +D
Sbjct: 188 MSLSLSPDFRTFISGACD-ASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSD 246
Query: 207 GSTVKFWDAN---HFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEI 263
+T + +D + N+ C I S + K G AG +D +D
Sbjct: 247 DATCRLFDIRADQELAMYSHDNIICGITSVAFS-KSGRLLFAGYDDFNCNVWDSMRQERA 305
Query: 264 ACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
GH V C+ + G + +GS D ++IW
Sbjct: 306 GVLAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIW 339
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 47/185 (25%), Positives = 79/185 (42%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D + L + ETG F GH G V S L + S + D SAK+WD G
Sbjct: 157 IVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A +F + TG + R+FD+ + D + +V
Sbjct: 217 MCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GST 209
A+ S + + + D +WD E L + V+ V++DG + T S
Sbjct: 277 AFSKSGRLLFAGYDDFN-CNVWDSMRQERAGVLAGHDNRVSCLGVTEDGMAVCTGSWDSF 335
Query: 210 VKFWD 214
+K W+
Sbjct: 336 LKIWN 340
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 173 (66.0 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 61/233 (26%), Positives = 107/233 (45%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V D+ S DG F +S S D L + TG+ F GH V S T+
Sbjct: 61 GHSHFVEDVVLSS---DGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDN 117
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE----HKHIVRACSFSEDTHL--LLTGGMEKILR 127
+ SAS D + K+W+ L G+ ++ HK V FS +T + +++ +K ++
Sbjct: 118 RQIVSASRDRTIKLWNTL-GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187
+++L V S G + TVA + D ++ ++ G + LWD+ G+ + +LE
Sbjct: 177 VWNLQNCKLRNSLVGHS-GYLNTVA-VSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG 234
Query: 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYG 240
S + S S + ++ A ++++ WD +V+ + E+ E G
Sbjct: 235 SIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNEGGVG 287
Score = 124 (48.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 56/210 (26%), Positives = 86/210 (40%)
Query: 101 HKHIVRACSFSED-THLLLTGGMEKILRIFDLNRPD----APPREVDRSPGSVRTVAWLH 155
H IV A + D + +++T +K + ++ L + D R + V V L
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVV-LS 72
Query: 156 SD-QTILSTCTDMGGVRLWDVRSGEIVQTL--ETKSPVTSAEVSQDGRYITTADGS-TVK 211
SD Q LS D G +RLWD+ +GE + TK V S S D R I +A T+K
Sbjct: 73 SDGQFALSGSWD-GELRLWDLATGETTRRFVGHTKD-VLSVAFSTDNRQIVSASRDRTIK 130
Query: 212 FWDAN---HFGLVKSYNMPCTIESASLEPK-YGNKFVAGGEDMWVRFFDFHTGNEIACNK 267
W+ + + + + P V+ D V+ ++
Sbjct: 131 LWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLV 190
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
GH G ++ V SP G ASG +DG I +W
Sbjct: 191 GHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 58/235 (24%), Positives = 98/235 (41%)
Query: 78 SASADFSAKVWDALTGDVLHSFE------HKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
+AS D S +W D + H H V S D L+G + LR++DL
Sbjct: 33 TASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 92
Query: 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET----K 187
+ R V + V +VA+ ++ I+S D ++LW+ GE T+ K
Sbjct: 93 ATGETTRRFVGHTK-DVLSVAFSTDNRQIVSASRDRT-IKLWNTL-GECKYTISEGDGHK 149
Query: 188 SPVTSAEVSQDGRYITTADGS---TVKFWDANHFGLVKSY-NMPCTIESASLEPKYGNKF 243
V+ S + T S TVK W+ + L S + + ++ P G+
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPD-GSLC 208
Query: 244 VAGGEDMWVRFFDFHTGNEI-ACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+GG+D + +D G ++ + G +H + FSP + +E+ +IRIW
Sbjct: 209 ASGGKDGVILLWDLAEGKKLYSLEAG--SIIHSLCFSPNRYWLCAATEN-SIRIW 260
Score = 57 (25.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPV-HC--VRFSPGGESYASGSEDGTIRIWQTG 300
ED+ V NE G+ V +C + +S G + SG DG +R+W G
Sbjct: 269 EDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGIG 324
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 195 (73.7 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 70/253 (27%), Positives = 110/253 (43%)
Query: 58 EGHKGAVWSCCLDTNAL-RAASASADFSAKVWDALT-GDVLHSFEHKHIVRACSFSEDTH 115
EGH V++ D +L R AS S D KVWD +T G+V ++ H++IV+ ++ D
Sbjct: 63 EGHVDGVYTMAKDPGSLERFASGSGDGVVKVWDLVTQGEVWNNTAHENIVKGVCWTPDRK 122
Query: 116 LLLTGGMEKILRIFDL--NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
LL +K +++FD + ++PP G+ ++ H DQ + + + ++
Sbjct: 123 LLSCAA-DKTIKLFDPYNSSSESPPLATYLGQGAFTSLTH-HRDQPFFAASSSQ--ISIY 178
Query: 174 DVR--SGEIVQTLETKSPV---TSAEVSQDGRYITTADG--STVKFWDANHFGLVKSYNM 226
D+ S QTL + V TS +Q + + G ++ +D + +
Sbjct: 179 DLSRPSSTPSQTLHWPTSVDTITSVAFNQTETSVLASTGIDRSIILYDLRTSSPLSKLVL 238
Query: 227 PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACN--KGHHGPVHCVRFSPGGES 284
+ S P F ED V FD N A N K H V V FSP GE
Sbjct: 239 KLASNAVSWNPMEAFNFAVANEDHNVYMFDMRKMNR-ALNVLKDHVAAVMDVDFSPTGEE 297
Query: 285 YASGSEDGTIRIW 297
+ S D TIR+W
Sbjct: 298 LVTASYDRTIRLW 310
Score = 116 (45.9 bits), Expect = 0.00062, P = 0.00062
Identities = 56/267 (20%), Positives = 102/267 (38%)
Query: 44 MLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDV----LHSF 99
++ GE W T H+ V C T + S +AD + K++D L ++
Sbjct: 96 LVTQGEV--WNNT--AHENIVKGVCW-TPDRKLLSCAADKTIKLFDPYNSSSESPPLATY 150
Query: 100 EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQT 159
+ + + D + + I+DL+RP + P + P SV T+ + +QT
Sbjct: 151 LGQGAFTSLTHHRDQPFFAASSSQ--ISIYDLSRPSSTPSQTLHWPTSVDTITSVAFNQT 208
Query: 160 ILSTCTDMG---GVRLWDVRSGEIVQTLETK--SPVTSAEVSQDGRYITTADGSTVKFWD 214
S G + L+D+R+ + L K S S + + + V +D
Sbjct: 209 ETSVLASTGIDRSIILYDLRTSSPLSKLVLKLASNAVSWNPMEAFNFAVANEDHNVYMFD 268
Query: 215 ANHFGLVKSY--NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIAC-NKGHHG 271
+ + + P G + V D +R ++ TG+ +
Sbjct: 269 MRKMNRALNVLKDHVAAVMDVDFSPT-GEELVTASYDRTIRLWNRATGHSRDIYHTQRMQ 327
Query: 272 PVHCVRFSPGGESYASGSEDGTIRIWQ 298
V +F+P + SGS+DG IR+W+
Sbjct: 328 RVFSAKFTPDNKYVLSGSDDGNIRLWR 354
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 197 (74.4 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 68/277 (24%), Positives = 123/277 (44%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
TP+G L++ S L NG T ++ + H AV S N S + K
Sbjct: 134 TPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKY 193
Query: 88 WDALTGDVLHSFEHKHI-VRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG 146
W +V H+ +R SFS L + +KI++I+D R + V
Sbjct: 194 WQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHG-W 252
Query: 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTA 205
V+ V+W H ++++ + +++WD +S + + TL KS V+ E +Q+G +I +A
Sbjct: 253 DVKCVSW-HPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSA 311
Query: 206 DGSTV-KFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN-- 261
+ K +D ++++ + + +L P + + FV+G +D + ++ GN
Sbjct: 312 SSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWI--VGNPE 369
Query: 262 -EIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ + H V + + P G ASGS D T + W
Sbjct: 370 PQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKFW 406
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 51/232 (21%), Positives = 94/232 (40%)
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
L S+S +F+ +W+ LT + + H VR+ +S + +++G ++ + N
Sbjct: 140 LVTGSSSGEFT--LWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPN 197
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD-VRSGEIVQTLETKSPVT 191
+ + +R +++ +D L++C D +++WD R E Q + V
Sbjct: 198 MNNVKIFKAHEQ-SKIRGLSFSPTDLK-LASCADDKIIKIWDFARCTEDNQLVGHGWDVK 255
Query: 192 SAEVS-QDGRYITTADGSTVKFWDANHF-GLVKSYNMPCTIESASLEPKYGNKFVAGGED 249
Q ++ + +K WDA + + T+ GN V+ D
Sbjct: 256 CVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQN-GNWIVSASSD 314
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES-YASGSEDGTIRIWQTG 300
++ FD T E+ KGH V + P E + SG +DG I W G
Sbjct: 315 QLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYWIVG 366
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 187 (70.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 59/252 (23%), Positives = 105/252 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 6 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 65
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ + GG++ I I+ L + R PG ++ D I+++ D L
Sbjct: 66 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT-CAL 124
Query: 173 WDVRSGE-IVQTLETKSPVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY-NMPCT 229
WD+ +G+ V V S ++ DGR +++ A +++K WD +++
Sbjct: 125 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 184
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESY 285
I + + P G F G +D R FD E+ H + C V FS G
Sbjct: 185 INAVAFFPN-GYAFTTGSDDATCRLFDLRADQELLMYS--HDNIICGITSVAFSRSGRLL 241
Query: 286 ASGSEDGTIRIW 297
+G +D IW
Sbjct: 242 LAGYDDFNCNIW 253
Score = 177 (67.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 66/278 (23%), Positives = 119/278 (42%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D ++
Sbjct: 22 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 81
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ S
Sbjct: 82 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHS 140
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYIT 203
G V +++ +T +S D ++LWDVR QT + +S + + +G T
Sbjct: 141 -GDVMSLSLAPDGRTFVSGACD-ASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 198
Query: 204 T-ADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ L+ S+ N+ C I S + + G +AG +D +D
Sbjct: 199 TGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMK 257
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G+ GH V C+ + G + A+GS D ++IW
Sbjct: 258 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 295
Score = 145 (56.1 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/186 (26%), Positives = 81/186 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+I++S D++ L + ETG F GH G V S L + S + D S K+WD
Sbjct: 113 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDS 172
Query: 94 DVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP--PREVDRSPGSVRT 150
+F H+ + A +F + + TG + R+FDL R D D + +
Sbjct: 173 MCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL-RADQELLMYSHDNIICGITS 231
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GS 208
VA+ S + +L+ D +WD G+ L + V+ V+ DG + T S
Sbjct: 232 VAFSRSGRLLLAGYDDFN-CNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 290
Query: 209 TVKFWD 214
+K W+
Sbjct: 291 FLKIWN 296
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 187 (70.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 65/259 (25%), Positives = 111/259 (42%)
Query: 58 EGHKGAVWSCCLDTNALR----AASASADFSAKVWDALTG--DVLHSFE-HKHIVRACSF 110
+ H A+WS +TN + S D KVW ++ S E H+ V +
Sbjct: 13 QAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDI 72
Query: 111 SEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
S + + ++ +R++DL + +D P T+A+ D L+T T MG V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLEN-GKQMKSIDAGPVDAWTLAF-SPDSQYLATGTHMGKV 130
Query: 171 RLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSY 224
++ V SG+ +L+T+ + S S DG+Y+ + DG + +D L+ + +
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEGH 189
Query: 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
MP I S + P V +D +++ +D N GH V V F P
Sbjct: 190 AMP--IRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTH 246
Query: 285 YASGSEDGTIRIWQTGPVT 303
+ S S D ++++W G T
Sbjct: 247 FVSSSSDKSVKVWDVGTRT 265
Score = 164 (62.8 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 60/247 (24%), Positives = 109/247 (44%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
+ EGH+ V S + AAS+S D ++WD G + S + + +FS D+
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDS 118
Query: 115 HLLLTGG-MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
L TG M K+ IF + +D + ++A+ + + S D G + ++
Sbjct: 119 QYLATGTHMGKV-NIFGVES-GKKEYSLDTRGKFILSIAYSPDGKYLASGAID-GIINIF 175
Query: 174 DVRSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCT-I 230
D+ +G+++ TLE + P+ S S D + + TA D +K +D H L + + + +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
+ + P FV+ D V+ +D T I H V V+++ G S +
Sbjct: 236 LNVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGD 294
Query: 291 DGTIRIW 297
D I ++
Sbjct: 295 DQEIHVY 301
Score = 130 (50.8 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 42/198 (21%), Positives = 88/198 (44%)
Query: 20 VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASA 79
VD + +PD +L + + + E+G + + + S + AS
Sbjct: 107 VDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 80 SADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP 138
+ D ++D TG +LH+ E H +R+ +FS D+ LL+T + ++I+D+ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 139 REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQ 197
+ V VA+ D +S+ +D V++WDV + + T + + V + +
Sbjct: 227 T-LSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCIHTFFDHQDQVWGVKYNG 284
Query: 198 DG-RYITTADGSTVKFWD 214
+G + ++ D + +D
Sbjct: 285 NGSKIVSVGDDQEIHVYD 302
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ P+ L +SP D L++AS D + + + + GT GH V + +
Sbjct: 188 GHAMPIRSLTFSP---DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
S+S+D S KVWD T +H+F +H+ V ++ + +++ G ++ + ++D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 170 (64.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 61/237 (25%), Positives = 108/237 (45%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V D+ S DG F +S S D L + TG+ F GH V S T+
Sbjct: 61 GHSHFVQDVVLSS---DGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDN 117
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE----HKHIVRACSFSEDTHL--LLTGGMEKILR 127
+ SAS D + K+W+ L G+ ++ HK V FS +T + +++ +K ++
Sbjct: 118 RQIVSASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187
+++L S G + TVA + D ++ ++ G + LWD+ G+ + +LE
Sbjct: 177 VWNLQNCKLRNTLAGHS-GYLNTVA-VSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG 234
Query: 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK--YGNK 242
S + S S + ++ A ++++ WD +V+ + E+ + GNK
Sbjct: 235 SIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNK 291
Score = 123 (48.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 55/210 (26%), Positives = 88/210 (41%)
Query: 101 HKHIVRACSFSED-THLLLTGGMEKILRIFDLNRPD----APPREVDRSPGSVRTVAWLH 155
H +V A + D + +++T +K + ++ L + D R + V+ V L
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVV-LS 72
Query: 156 SD-QTILSTCTDMGGVRLWDVRSGEIVQTL--ETKSPVTSAEVSQDGRYITTADGS-TVK 211
SD Q LS D G +RLWD+ +GE + TK V S S D R I +A T+K
Sbjct: 73 SDGQFALSGSWD-GELRLWDLATGESTRRFVGHTKD-VLSVAFSTDNRQIVSASRDRTIK 130
Query: 212 FWDAN---HFGLVKSYNMPCTIESASLEPK-YGNKFVAGGEDMWVRFFDFHTGNEIACNK 267
W+ + + ++ + P V+ D V+ ++
Sbjct: 131 LWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLA 190
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
GH G ++ V SP G ASG +DG I +W
Sbjct: 191 GHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Score = 56 (24.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 273 VHC--VRFSPGGESYASGSEDGTIRIWQTG 300
++C + +S G + SG DG IR+W G
Sbjct: 295 IYCTSLNWSADGNTLFSGYTDGVIRVWGIG 324
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 193 (73.0 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 57/207 (27%), Positives = 95/207 (45%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+RPV F I+P F++S S+D L + +T I + GH +W
Sbjct: 401 GHTRPV---FGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFG 457
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
A+AS D +A++WD L F H++ V SF + L TG + R++D+
Sbjct: 458 YYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDV- 516
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG-EIVQTLETKSPVT 191
R R + V + + +D L++ + G +++WD+RS + V ++ S V
Sbjct: 517 RTGGTVRVFNAHHSPVSALC-MSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVY 575
Query: 192 SAEVSQDGRYITTADGST-VKFWDANH 217
S S D + + + T V FWD +
Sbjct: 576 SLSFSYDNKILVSGGADTDVNFWDLTY 602
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 51/207 (24%), Positives = 81/207 (39%)
Query: 105 VRACSFSEDTHLLLTGGMEKILRIFD-LNRPDAP-------PREVDRSPGSVRTV--AWL 154
V +FS+D + G + + ++ N P P + G R V +
Sbjct: 352 VNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSI 411
Query: 155 HSDQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVK 211
+ + +C++ G RLW D +S IV+ +P+ + S G Y TA T +
Sbjct: 412 SPQKEFILSCSEDGFTRLWSKDTKS-TIVKYAGHNAPIWDVQFSPFGYYFATASHDQTAR 470
Query: 212 FWDANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
WD H ++ + ++ S P G D R +D TG + HH
Sbjct: 471 LWDVEHAAPLRVFVGHQNDVDCVSFHPNAAY-LATGSSDHTTRMWDVRTGGTVRVFNAHH 529
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIW 297
PV + S G S AS E G I++W
Sbjct: 530 SPVSALCMSADGLSLASADESGIIKVW 556
Score = 155 (59.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 58/219 (26%), Positives = 92/219 (42%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
GH V+ + S S D ++W T + + H + FS +
Sbjct: 401 GHTRPVFGVSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYF 460
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
T ++ R++D+ AP R V V++ H + L+T + R+WDVR+
Sbjct: 461 ATASHDQTARLWDVEHA-APLRVFVGHQNDVDCVSF-HPNAAYLATGSSDHTTRMWDVRT 518
Query: 178 GEIVQTLETK-SPVTSAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCTIESASL 235
G V+ SPV++ +S DG + +AD S +K WD S+ +I SL
Sbjct: 519 GGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVY-SL 577
Query: 236 EPKYGNKF-VAGGEDMWVRFFDFHTGNEIACNKGHHGPV 273
Y NK V+GG D V F+D N ++ G P+
Sbjct: 578 SFSYDNKILVSGGADTDVNFWDLTYRNNLS--DGEQSPL 614
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 187 (70.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 59/252 (23%), Positives = 105/252 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ + GG++ I I+ L + R PG ++ D I+++ D L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT-CAL 168
Query: 173 WDVRSGE-IVQTLETKSPVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY-NMPCT 229
WD+ +G+ V V S ++ DGR +++ A +++K WD +++
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESY 285
I + + P G F G +D R FD E+ H + C V FS G
Sbjct: 229 INAVAFFPN-GYAFTTGSDDATCRLFDLRADQELLMYS--HDNIICGITSVAFSRSGRLL 285
Query: 286 ASGSEDGTIRIW 297
+G +D IW
Sbjct: 286 LAGYDDFNCNIW 297
Score = 177 (67.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 66/278 (23%), Positives = 119/278 (42%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D ++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ S
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHS 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYIT 203
G V +++ +T +S D ++LWDVR QT + +S + + +G T
Sbjct: 185 -GDVMSLSLAPDGRTFVSGACD-ASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 204 T-ADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ L+ S+ N+ C I S + + G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/186 (26%), Positives = 81/186 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+I++S D++ L + ETG F GH G V S L + S + D S K+WD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDS 216
Query: 94 DVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP--PREVDRSPGSVRT 150
+F H+ + A +F + + TG + R+FDL R D D + +
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL-RADQELLMYSHDNIICGITS 275
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GS 208
VA+ S + +L+ D +WD G+ L + V+ V+ DG + T S
Sbjct: 276 VAFSRSGRLLLAGYDDFN-CNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 209 TVKFWD 214
+K W+
Sbjct: 335 FLKIWN 340
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 187 (70.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 59/252 (23%), Positives = 105/252 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ + GG++ I I+ L + R PG ++ D I+++ D L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT-CAL 168
Query: 173 WDVRSGE-IVQTLETKSPVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY-NMPCT 229
WD+ +G+ V V S ++ DGR +++ A +++K WD +++
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESY 285
I + + P G F G +D R FD E+ H + C V FS G
Sbjct: 229 INAVAFFPN-GYAFTTGSDDATCRLFDLRADQELLMYS--HDNIICGITSVAFSRSGRLL 285
Query: 286 ASGSEDGTIRIW 297
+G +D IW
Sbjct: 286 LAGYDDFNCNIW 297
Score = 177 (67.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 66/278 (23%), Positives = 119/278 (42%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D ++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ S
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHS 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYIT 203
G V +++ +T +S D ++LWDVR QT + +S + + +G T
Sbjct: 185 -GDVMSLSLAPDGRTFVSGACD-ASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 204 T-ADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ L+ S+ N+ C I S + + G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/186 (26%), Positives = 81/186 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+I++S D++ L + ETG F GH G V S L + S + D S K+WD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDS 216
Query: 94 DVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP--PREVDRSPGSVRT 150
+F H+ + A +F + + TG + R+FDL R D D + +
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL-RADQELLMYSHDNIICGITS 275
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GS 208
VA+ S + +L+ D +WD G+ L + V+ V+ DG + T S
Sbjct: 276 VAFSRSGRLLLAGYDDFN-CNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 209 TVKFWD 214
+K W+
Sbjct: 335 FLKIWN 340
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 187 (70.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 59/252 (23%), Positives = 105/252 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ + GG++ I I+ L + R PG ++ D I+++ D L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT-CAL 168
Query: 173 WDVRSGE-IVQTLETKSPVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY-NMPCT 229
WD+ +G+ V V S ++ DGR +++ A +++K WD +++
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESY 285
I + + P G F G +D R FD E+ H + C V FS G
Sbjct: 229 INAVAFFPN-GYAFTTGSDDATCRLFDLRADQELLMYS--HDNIICGITSVAFSRSGRLL 285
Query: 286 ASGSEDGTIRIW 297
+G +D IW
Sbjct: 286 LAGYDDFNCNIW 297
Score = 177 (67.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 66/278 (23%), Positives = 119/278 (42%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D ++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ S
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHS 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYIT 203
G V +++ +T +S D ++LWDVR QT + +S + + +G T
Sbjct: 185 -GDVMSLSLAPDGRTFVSGACD-ASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 204 T-ADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ L+ S+ N+ C I S + + G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/186 (26%), Positives = 81/186 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+I++S D++ L + ETG F GH G V S L + S + D S K+WD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDS 216
Query: 94 DVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP--PREVDRSPGSVRT 150
+F H+ + A +F + + TG + R+FDL R D D + +
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL-RADQELLMYSHDNIICGITS 275
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GS 208
VA+ S + +L+ D +WD G+ L + V+ V+ DG + T S
Sbjct: 276 VAFSRSGRLLLAGYDDFN-CNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 209 TVKFWD 214
+K W+
Sbjct: 335 FLKIWN 340
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 187 (70.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 59/252 (23%), Positives = 105/252 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ + GG++ I I+ L + R PG ++ D I+++ D L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT-CAL 168
Query: 173 WDVRSGE-IVQTLETKSPVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY-NMPCT 229
WD+ +G+ V V S ++ DGR +++ A +++K WD +++
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESY 285
I + + P G F G +D R FD E+ H + C V FS G
Sbjct: 229 INAVAFFPN-GYAFTTGSDDATCRLFDLRADQELLMYS--HDNIICGITSVAFSRSGRLL 285
Query: 286 ASGSEDGTIRIW 297
+G +D IW
Sbjct: 286 LAGYDDFNCNIW 297
Score = 177 (67.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 66/278 (23%), Positives = 119/278 (42%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D ++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ S
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHS 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYIT 203
G V +++ +T +S D ++LWDVR QT + +S + + +G T
Sbjct: 185 -GDVMSLSLAPDGRTFVSGACD-ASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 204 T-ADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ L+ S+ N+ C I S + + G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/186 (26%), Positives = 81/186 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+I++S D++ L + ETG F GH G V S L + S + D S K+WD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDS 216
Query: 94 DVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP--PREVDRSPGSVRT 150
+F H+ + A +F + + TG + R+FDL R D D + +
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL-RADQELLMYSHDNIICGITS 275
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GS 208
VA+ S + +L+ D +WD G+ L + V+ V+ DG + T S
Sbjct: 276 VAFSRSGRLLLAGYDDFN-CNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 209 TVKFWD 214
+K W+
Sbjct: 335 FLKIWN 340
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 187 (70.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 59/252 (23%), Positives = 105/252 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ + GG++ I I+ L + R PG ++ D I+++ D L
Sbjct: 110 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT-CAL 168
Query: 173 WDVRSGE-IVQTLETKSPVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY-NMPCT 229
WD+ +G+ V V S ++ DGR +++ A +++K WD +++
Sbjct: 169 WDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESD 228
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESY 285
I + + P G F G +D R FD E+ H + C V FS G
Sbjct: 229 INAVAFFPN-GYAFTTGSDDATCRLFDLRADQELLMYS--HDNIICGITSVAFSRSGRLL 285
Query: 286 ASGSEDGTIRIW 297
+G +D IW
Sbjct: 286 LAGYDDFNCNIW 297
Score = 177 (67.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 66/278 (23%), Positives = 119/278 (42%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D ++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYS 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ S
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHS 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYIT 203
G V +++ +T +S D ++LWDVR QT + +S + + +G T
Sbjct: 185 -GDVMSLSLAPDGRTFVSGACD-ASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 204 T-ADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ L+ S+ N+ C I S + + G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS-RSGRLLLAGYDDFNCNIWDAMK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 145 (56.1 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/186 (26%), Positives = 81/186 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+I++S D++ L + ETG F GH G V S L + S + D S K+WD
Sbjct: 157 IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDS 216
Query: 94 DVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP--PREVDRSPGSVRT 150
+F H+ + A +F + + TG + R+FDL R D D + +
Sbjct: 217 MCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL-RADQELLMYSHDNIICGITS 275
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GS 208
VA+ S + +L+ D +WD G+ L + V+ V+ DG + T S
Sbjct: 276 VAFSRSGRLLLAGYDDFN-CNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 209 TVKFWD 214
+K W+
Sbjct: 335 FLKIWN 340
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 189 (71.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 60/256 (23%), Positives = 107/256 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
+ + GG++ I I++L + RE+ G + +L +Q + S+
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CA 167
Query: 172 LWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY--NMP 227
LWD+ +G+ T + V S ++ D R +++ A ++ K WD G+ +
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVRE-GMCRQTFTGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + P GN F G +D R FD E+ H + C V FS G
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMVYS--HDNIICGITSVAFSKSGR 283
Query: 284 SYASGSEDGTIRIWQT 299
+G +D +W T
Sbjct: 284 LLLAGYDDFNCNVWDT 299
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 46/169 (27%), Positives = 75/169 (44%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D++ L + ETG TF GH G V S L +A S + D SAK+WD G
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDARCFVSGACDASAKLWDVREG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A F + + TG + R+FDL + D + +V
Sbjct: 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDG 199
A+ S + +L+ D +WD + L + V+ V+ DG
Sbjct: 277 AFSKSGRLLLAGYDDFN-CNVWDTLKADRAGVLAGHDNRVSCLGVTDDG 324
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 185 (70.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 65/259 (25%), Positives = 111/259 (42%)
Query: 58 EGHKGAVWSCCLDTNALR----AASASADFSAKVWDALTG--DVLHSFE-HKHIVRACSF 110
+ H A+WS TN + S D KVW D+ S E H+ V +
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDI 72
Query: 111 SEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
S + + ++ +R++DL+ + +D P T+A+ D L+T T +G V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLDN-GKQIKSIDAGPVDAWTLAF-SPDSQYLATGTHVGKV 130
Query: 171 RLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSY 224
++ V SG+ +L+T+ + S S DG+Y+ + DG + +D L+ + +
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEGH 189
Query: 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
MP I S + P V +D +++ +D N GH V V F P
Sbjct: 190 AMP--IRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTH 246
Query: 285 YASGSEDGTIRIWQTGPVT 303
+ S S D ++++W G T
Sbjct: 247 FVSSSSDKSVKVWDVGTRT 265
Score = 162 (62.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 59/251 (23%), Positives = 109/251 (43%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
+ EGH+ V S + AAS+S D ++WD G + S + + +FS D+
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDS 118
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L TG + IF + +D + ++A+ + + S D G + ++D
Sbjct: 119 QYLATGTHVGKVNIFGVES-GKKEYSLDTRGKFILSIAYSPDGKYLASGAID-GIINIFD 176
Query: 175 VRSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCT-IE 231
+ +G+++ TLE + P+ S S D + + TA D +K +D H L + + + +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
+ + P FV+ D V+ +D T + H V V+++ G S +D
Sbjct: 237 NVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
Query: 292 GTIRIWQTGPV 302
I ++ PV
Sbjct: 296 QEIHVYDC-PV 305
Score = 131 (51.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 43/198 (21%), Positives = 88/198 (44%)
Query: 20 VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASA 79
VD + +PD +L + + + E+G + + + S + AS
Sbjct: 107 VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 80 SADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP 138
+ D ++D TG +LH+ E H +R+ +FS D+ LL+T + ++I+D+ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 139 REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQ 197
+ V VA+ D +S+ +D V++WDV + V T + + V + +
Sbjct: 227 T-LSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFDHQDQVWGVKYNG 284
Query: 198 DG-RYITTADGSTVKFWD 214
+G + ++ D + +D
Sbjct: 285 NGSKIVSVGDDQEIHVYD 302
Score = 123 (48.4 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ P+ L +SP D L++AS D + + + + GT GH V + +
Sbjct: 188 GHAMPIRSLTFSP---DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
S+S+D S KVWD T +H+F +H+ V ++ + +++ G ++ + ++D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 185 (70.2 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 65/259 (25%), Positives = 111/259 (42%)
Query: 58 EGHKGAVWSCCLDTNALR----AASASADFSAKVWDALTG--DVLHSFE-HKHIVRACSF 110
+ H A+WS +TN + S D KVW ++ S E H+ V +
Sbjct: 13 QAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDI 72
Query: 111 SEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
S + + ++ +R++DL + +D P T+A+ D L+T T MG V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLEN-GKQMKSIDAGPVDAWTLAF-SPDSQHLATGTHMGKV 130
Query: 171 RLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSY 224
++ V SG+ +L+T+ + S S DG+Y+ + DG + +D L+ + +
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEGH 189
Query: 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
MP I S + P V +D +++ +D N GH V V F P
Sbjct: 190 AMP--IRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTH 246
Query: 285 YASGSEDGTIRIWQTGPVT 303
+ S S D ++++W G T
Sbjct: 247 FVSSSSDKSVKVWDVGTRT 265
Score = 162 (62.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 60/247 (24%), Positives = 109/247 (44%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
+ EGH+ V S + AAS+S D ++WD G + S + + +FS D+
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDS 118
Query: 115 HLLLTGG-MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
L TG M K+ IF + +D + ++A+ + + S D G + ++
Sbjct: 119 QHLATGTHMGKV-NIFGVES-GKKEYSLDTRGKFILSIAYSPDGKYLASGAID-GIINIF 175
Query: 174 DVRSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCT-I 230
D+ +G+++ TLE + P+ S S D + + TA D +K +D H L + + + +
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
+ + P FV+ D V+ +D T I H V V+++ G S +
Sbjct: 236 LNVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGD 294
Query: 291 DGTIRIW 297
D I ++
Sbjct: 295 DQEIHVY 301
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/198 (21%), Positives = 87/198 (43%)
Query: 20 VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASA 79
VD + +PD L + + + E+G + + + S + AS
Sbjct: 107 VDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 80 SADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP 138
+ D ++D TG +LH+ E H +R+ +FS D+ LL+T + ++I+D+ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 139 REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQ 197
+ V VA+ D +S+ +D V++WDV + + T + + V + +
Sbjct: 227 T-LSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCIHTFFDHQDQVWGVKYNG 284
Query: 198 DG-RYITTADGSTVKFWD 214
+G + ++ D + +D
Sbjct: 285 NGSKIVSVGDDQEIHVYD 302
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 31/118 (26%), Positives = 59/118 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ P+ L +SP D L++AS D + + + + GT GH V + +
Sbjct: 188 GHAMPIRSLTFSP---DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
S+S+D S KVWD T +H+F +H+ V ++ + +++ G ++ + ++D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 186 (70.5 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 68/304 (22%), Positives = 128/304 (42%)
Query: 6 IAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGA 63
+A +V GH +++ S + DG FL SA D L N GE ++ +GHKGA
Sbjct: 26 MAPTMVLQGHGG---EIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENF-AVLKGHKGA 81
Query: 64 VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE-DTHLLLTGG 121
+ + ++ SA D + +VWD TG + +F+ H IV + + ++ +
Sbjct: 82 IMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSAS 141
Query: 122 MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIV 181
+ + + D+ +A + + + + V + + ++ D +++WD+ ++
Sbjct: 142 DDGTVMVHDMRSKEAAKKFICKYQQTA--VTFNDAADNVICGGID-NQIKVWDMLRNDVR 198
Query: 182 QTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFWDANHF----GLVKSY-----NMPCTI 230
L + +TS VS +G ++ + + ++ WD F LV Y N +
Sbjct: 199 YVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNL 258
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
P+ N AG D +V ++ + + GH G V+C P + S
Sbjct: 259 LKCGWSPR-DNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGS 317
Query: 291 DGTI 294
D TI
Sbjct: 318 DKTI 321
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 191 (72.3 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 71/296 (23%), Positives = 128/296 (43%)
Query: 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLRNG-ETGDWIGTFEGHKGAVWSCCLDTNA 73
H++ + L + P + G L+S S DS+ + + + + T+ GH ++ +T+
Sbjct: 249 HTKAITSLNFFPNS--GHLLLSGSADSTVKIWDVYHQRELLRTYSGHSKSLSDTTFNTHG 306
Query: 74 LRAASASADFSAKVWDALTGDVLHSF---EHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
+ SAS D K+WD TG + F + H+VR SE H + G + + FD
Sbjct: 307 DKFLSASFDRMMKLWDTETGKCIAKFTTGKTPHVVRFNPTSELGHEFVAGMSDNKIVQFD 366
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-- 188
+ +E D G V T+ + + ++T D +R W+ G ++ +
Sbjct: 367 TRAGNETVQEYDHHLGPVNTITFCDDGRRFMTTSDDRT-LRAWEYGFGVPIKYIAEPYLF 425
Query: 189 PVTSAEVSQDGRYIT--TADGSTVKFWDANHF--GLVKSYNMPCTIESA-SLEPKYGNKF 243
+T A G+Y+ ++D V + + F KSY SA ++ +F
Sbjct: 426 AMTRAATHPSGKYVAYQSSDNQIVVYSSNDKFRQNRKKSYRGHNNAGSAIDIDISADGQF 485
Query: 244 VAGGEDM-WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES-YASGSEDGTIRIW 297
+A G+ +V F+D+ + + G V CV++ P S A+G G I+ W
Sbjct: 486 LASGDTGGYVAFWDWKSCKMFHKIQVEDGQVSCVKWHPQESSKVATGGASGIIKFW 541
Score = 151 (58.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 155 HSDQTILSTCTDMGGVRLWDV-RSGEIVQTLETKSP-VTSAEVSQDG-RYITTADGSTVK 211
+S +LS D V++WDV E+++T S ++ + G ++++ + +K
Sbjct: 261 NSGHLLLSGSAD-STVKIWDVYHQRELLRTYSGHSKSLSDTTFNTHGDKFLSASFDRMMK 319
Query: 212 FWDANHFGLVKSYNMPCTIESASLEP--KYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269
WD + + T P + G++FVAG D + FD GNE H
Sbjct: 320 LWDTETGKCIAKFTTGKTPHVVRFNPTSELGHEFVAGMSDNKIVQFDTRAGNETVQEYDH 379
Query: 270 H-GPVHCVRFSPGGESYASGSEDGTIRIWQTG 300
H GPV+ + F G + + S+D T+R W+ G
Sbjct: 380 HLGPVNTITFCDDGRRFMTTSDDRTLRAWEYG 411
Score = 44 (20.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRA 107
+N R S++A S K + LTG +F +H R+
Sbjct: 45 SNPFRDDSSAASASQKRKNVLTGFAEETFVSEHTFRS 81
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 125 (49.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 61/244 (25%), Positives = 96/244 (39%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
GH + + N ASASAD +A++WDA TG + + H V ++S D+ L
Sbjct: 178 GHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGVSCLAWSPDSGTL 237
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177
TG +K +R++D + P V G T +S + +G
Sbjct: 238 ATGSDDKAIRLWDRITAE-PAHAVGTQDGDDDAERGRTHGGTRISGASGIGVGGGGGPAR 296
Query: 178 GEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKF-WDANHFGLVKSYNMPCTIESAS-L 235
G L + V S G + + F WD L++S +P + S +
Sbjct: 297 GTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRS--LPAHSDPVSGI 354
Query: 236 E-PKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP-VHCVRFSPGGESYASGSEDGT 293
+ + G V+ D +R +D TG + P V V FSP G + + D
Sbjct: 355 DFCRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSC 414
Query: 294 IRIW 297
IR+W
Sbjct: 415 IRLW 418
Score = 122 (48.0 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 52/204 (25%), Positives = 92/204 (45%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H + V +FS ++L +G ++ + ++D+ R R + V + + D T+
Sbjct: 305 HHNYVYCLAFSPKGNILASGSYDEAVFLWDV-RAGRLMRSLPAHSDPVSGIDFCR-DGTL 362
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWD-AN 216
+ +C+ G +R+WD +G+ ++TL E VT+ S +GRYI + S ++ WD
Sbjct: 363 VVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCIRLWDYIA 422
Query: 217 HFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFH--TGNEIACNKGHHGPVH 274
H VK S+ +G V E+ + + G+E + H P
Sbjct: 423 HPSKVKKTYQGHVNTGFSIGGCFG---VVQDEEEEIEDEQQNGEDGDEDEDEQDRH-PRR 478
Query: 275 CVRFSPGGESY-ASGSEDGTIRIW 297
R P +++ AS SEDG I +W
Sbjct: 479 KQR-QPKQQAFVASASEDGHIVLW 501
Score = 118 (46.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL 69
L GHS+P+ + I+P+G ++ SAS D + + + ETG I T GH V SC
Sbjct: 174 LELRGHSQPIAQV---RISPNGRWIASASADGTARIWDAETGAHIDTLVGHMAGV-SCLA 229
Query: 70 ---DTNALRAASASADFSAKVWDALTGDVLHS 98
D+ L A+ S D + ++WD +T + H+
Sbjct: 230 WSPDSGTL--ATGSDDKAIRLWDRITAEPAHA 259
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 185 (70.2 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 61/247 (24%), Positives = 116/247 (46%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V D+ I+ DG + +SAS D + L + ETG+ F GHKG V S + N
Sbjct: 64 GHSHIVQDV---TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNL 120
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRAC--SFSEDTHLLLTGGMEKILRIFD 130
+ SAS D + KVW+ + G+ + + H V A S S+ + +++ +K ++ +D
Sbjct: 121 RQIVSASRDKTVKVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWD 179
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
L + + G + + L D ++ ++ G + LWD+ + + TLE K+ V
Sbjct: 180 LADYSVNADFIGHT-GYISCIT-LSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEV 237
Query: 191 TSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK-YGNKFVAGGED 249
+ S + ++ A S +K + L+ + + + +P+ + A G++
Sbjct: 238 HALAFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQN 297
Query: 250 MWVRFFD 256
++ + D
Sbjct: 298 LFAGYTD 304
Score = 147 (56.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 70/260 (26%), Positives = 113/260 (43%)
Query: 55 GTFEGHKGAVWSCCLDTNALRA---ASASADFSAKVWDALTG--DVLH-----SFE-HKH 103
GT EGH G W L T S S D + W LTG D + SF+ H H
Sbjct: 11 GTLEGHNG--WVTSLATTPAHPDLLLSGSRDKTLIKWK-LTGGEDNQYGIPKKSFKGHSH 67
Query: 104 IVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163
IV+ + S D L+ ++ LR++DL + R V G V +V+ + + I+S
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHK-GDVLSVSIAKNLRQIVSA 126
Query: 164 CTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVS---QDGRYITTADGSTVKFWDANHFG 219
D V++W+ GE + TL + V++ +S Q I+ + TVK WD +
Sbjct: 127 SRDKT-VKVWNT-IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYS 184
Query: 220 LVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRF 278
+ + I +L P G+ + G+D + +D + N+ VH + F
Sbjct: 185 VNADFIGHTGYISCITLSPD-GSLCASAGKDGVIILWDLNK-NKTLYTLEAKAEVHALAF 242
Query: 279 SPGGESYASGSEDGTIRIWQ 298
SP A+ + G I+I++
Sbjct: 243 SPNRYWLAAATTSG-IKIFK 261
Score = 131 (51.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 53/209 (25%), Positives = 84/209 (40%)
Query: 116 LLLTGGMEKILRIFDL-----NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
LLL+G +K L + L N+ P + V+ V LS D +
Sbjct: 32 LLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTISADGAYALSASWDRT-L 90
Query: 171 RLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPC 228
RLWD+ +GE Q + K V S ++++ R I +A TVK W+ +
Sbjct: 91 RLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGECMATLTGHND 150
Query: 229 TIESASLEPK-YGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYAS 287
+ + + P + ++ D V+ +D + A GH G + C+ SP G AS
Sbjct: 151 WVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCAS 210
Query: 288 GSEDGTIRIWQTGPVTNDDTETLTANGTI 316
+DG I +W N TL A +
Sbjct: 211 AGKDGVIILWDLNK--NKTLYTLEAKAEV 237
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 185 (70.2 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 61/247 (24%), Positives = 116/247 (46%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V D+ I+ DG + +SAS D + L + ETG+ F GHKG V S + N
Sbjct: 64 GHSHIVQDV---TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNL 120
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRAC--SFSEDTHLLLTGGMEKILRIFD 130
+ SAS D + KVW+ + G+ + + H V A S S+ + +++ +K ++ +D
Sbjct: 121 RQIVSASRDKTVKVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWD 179
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
L + + G + + L D ++ ++ G + LWD+ + + TLE K+ V
Sbjct: 180 LADYSVNADFIGHT-GYISCIT-LSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEV 237
Query: 191 TSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK-YGNKFVAGGED 249
+ S + ++ A S +K + L+ + + + +P+ + A G++
Sbjct: 238 HALAFSPNRYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQN 297
Query: 250 MWVRFFD 256
++ + D
Sbjct: 298 LFAGYTD 304
Score = 147 (56.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 70/260 (26%), Positives = 113/260 (43%)
Query: 55 GTFEGHKGAVWSCCLDTNALRA---ASASADFSAKVWDALTG--DVLH-----SFE-HKH 103
GT EGH G W L T S S D + W LTG D + SF+ H H
Sbjct: 11 GTLEGHNG--WVTSLATTPAHPDLLLSGSRDKTLIKWK-LTGGEDNQYGIPKKSFKGHSH 67
Query: 104 IVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163
IV+ + S D L+ ++ LR++DL + R V G V +V+ + + I+S
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHK-GDVLSVSIAKNLRQIVSA 126
Query: 164 CTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVS---QDGRYITTADGSTVKFWDANHFG 219
D V++W+ GE + TL + V++ +S Q I+ + TVK WD +
Sbjct: 127 SRDKT-VKVWNT-IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYS 184
Query: 220 LVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRF 278
+ + I +L P G+ + G+D + +D + N+ VH + F
Sbjct: 185 VNADFIGHTGYISCITLSPD-GSLCASAGKDGVIILWDLNK-NKTLYTLEAKAEVHALAF 242
Query: 279 SPGGESYASGSEDGTIRIWQ 298
SP A+ + G I+I++
Sbjct: 243 SPNRYWLAAATTSG-IKIFK 261
Score = 131 (51.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 53/209 (25%), Positives = 84/209 (40%)
Query: 116 LLLTGGMEKILRIFDL-----NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
LLL+G +K L + L N+ P + V+ V LS D +
Sbjct: 32 LLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTISADGAYALSASWDRT-L 90
Query: 171 RLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPC 228
RLWD+ +GE Q + K V S ++++ R I +A TVK W+ +
Sbjct: 91 RLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGECMATLTGHND 150
Query: 229 TIESASLEPK-YGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYAS 287
+ + + P + ++ D V+ +D + A GH G + C+ SP G AS
Sbjct: 151 WVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCAS 210
Query: 288 GSEDGTIRIWQTGPVTNDDTETLTANGTI 316
+DG I +W N TL A +
Sbjct: 211 AGKDGVIILWDLNK--NKTLYTLEAKAEV 237
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 191 (72.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 50/185 (27%), Positives = 87/185 (47%)
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL TGG + + ++ +N+P+ + V +V L++ + ++ + G +R+WD+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCI-MSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWDL 92
Query: 176 RSGEIVQTLET-KSPVTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPC-TIES 232
+ +I++TL K+ + S + G ++ + T +K WD G V Y +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P G + +D V+ +D G ++ GH GPV+ V F P ASGS D
Sbjct: 153 LRFSPD-GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 293 TIRIW 297
TIR W
Sbjct: 212 TIRFW 216
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 48/184 (26%), Positives = 82/184 (44%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ PV + + TP+ +++ S+ S + + E + T GHK + C LD +
Sbjct: 61 GHTSPVESVRLN--TPEEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANI--CSLDFHP 115
Query: 74 LR--AASASADFSAKVWDALT-GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
AS S D + K+WD G V H VR FS D L + + ++++D
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SP 189
L E G V V + H ++ +L++ + +R WD+ ++V +E + P
Sbjct: 176 LTAGKMMS-EFPGHTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Query: 190 VTSA 193
V A
Sbjct: 234 VRYA 237
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/143 (25%), Positives = 64/143 (44%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + L + P G F+ S S+D++ L + + + GH AV +
Sbjct: 103 GHKANICSLDFHPY---GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
ASA+ D + K+WD G ++ F H V F + +LL +G ++ +R +DL
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLE 219
Query: 133 RPDAPPREVDRSPGSVRTV-AWL 154
+ ++ PG VR +W+
Sbjct: 220 KFQVVSC-IEGEPGPVRYAGSWV 241
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 48/197 (24%), Positives = 84/197 (42%)
Query: 54 IGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE 112
I + GH V S L+T + S S +VWD +L + HK + + F
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
+ +G + ++++D+ R R S +VR + + D L++ D V+L
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRF-SPDGKWLASAADDHTVKL 173
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGS--TVKFWDANHFGLVKSYNMPCT 229
WD+ +G+++ + PV E + Y+ + S T++FWD F +V C
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVS-----C- 226
Query: 230 IESASLEPKYGNKFVAG 246
IE +Y +V G
Sbjct: 227 IEGEPGPVRYAGSWVVG 243
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 42/202 (20%), Positives = 85/202 (42%)
Query: 77 ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
A+ D +W + + S H V + + L++ G +R++DL
Sbjct: 37 ATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR-SGEIVQTLETKSPVTSAE 194
R + ++ ++ + + + S D ++LWD+R G + + V
Sbjct: 97 IL-RTLMGHKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 195 VSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV--AGGEDMW 251
S DG+++ +A D TVK WD ++ + P ++ + N+++ +G D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEF--PGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 252 VRFFDFHTGNEIACNKGHHGPV 273
+RF+D ++C +G GPV
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPV 234
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 190 (71.9 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 80/321 (24%), Positives = 139/321 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH ++ +SP++ ++S S DS+ + + +TG + T +GH V + N
Sbjct: 146 GHGEAILATSFSPVSSST--MVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNG 203
Query: 74 LRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFS-EDTHL-------LLTGGMEKI 125
A+ S D + ++WDA G L + H+ S + E HL L + +
Sbjct: 204 AMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDST 263
Query: 126 LRIFDL--NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT 183
+RI+D+ R D + GSV V W + + I ++ D +++W+ ++G ++QT
Sbjct: 264 VRIWDVISKRADIV---LSGHKGSVTCVRWGGTGK-IYTSSHDRT-IKVWNSQTGTLIQT 318
Query: 184 LETKSP-VTSAEVSQDGRYITTADGSTVKF--WDANHFGLVKS-YNMPCTIESASLEPKY 239
L + V +S D T T K DA+ + K + TI + +E
Sbjct: 319 LSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVE--- 375
Query: 240 GNKFVAGGEDMWVRFFDFHTGNE-IACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
K V+ +D + +D + ++ +A GH V+ V FSP AS D +++W
Sbjct: 376 --KLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWN 433
Query: 299 TGPVTNDDTETLTANGTIGKV 319
G D T G +G V
Sbjct: 434 -G---RDGKFITTLRGHVGAV 450
Score = 172 (65.6 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 41/117 (35%), Positives = 61/117 (52%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH + V + +SP D ++ SA D+ L NG G +I T GH GAV+ CC ++
Sbjct: 403 GHQKEVNHVTFSP---DMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADS 459
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIF 129
S+S D + KVW+ TG + HK V A +S D + +GG +K +RI+
Sbjct: 460 RLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 135 (52.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 64/306 (20%), Positives = 131/306 (42%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGT-FEGHKGAVWSCCLDTN 72
GH+ V+ + YSP +G + + S D++ + + + G +G +GH + S +
Sbjct: 189 GHTSWVLAVSYSP---NGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPY 245
Query: 73 AL------RAASASADFSAKVWDALT--GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEK 124
L R ASAS D + ++WD ++ D++ S HK V C T + T ++
Sbjct: 246 HLQQSGHPRLASASKDSTVRIWDVISKRADIVLS-GHKGSV-TCVRWGGTGKIYTSSHDR 303
Query: 125 ILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTD-MGGVRLWDVRSGEIVQT 183
+++++ ++ + + V +A L +D + + D G V D + +
Sbjct: 304 TIKVWN-SQTGTLIQTLSAHAHRVNHLA-LSTDFILRTAYHDHTGKVPESDADKVAMAKK 361
Query: 184 LETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFG--LVKSYNMPCTIESASLEPKYGN 241
K+ + ++ + + ++ +D T+ WD + + + + P
Sbjct: 362 RFEKAATINNKIVE--KLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAY 419
Query: 242 KFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW--QT 299
+ G D V+ ++ G I +GH G V+ FS S S+D T+++W +T
Sbjct: 420 -IASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRT 478
Query: 300 GPVTND 305
G ++ D
Sbjct: 479 GKLSED 484
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 188 (71.2 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 73/309 (23%), Positives = 133/309 (43%)
Query: 2 DKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK 61
D++K + H P+ ++ ++ G I+ S D + + + +G+ + T EGH+
Sbjct: 78 DERKFYLFRALQAHILPLTNVAFNK---SGSCFITGSYDRTCKIWDTASGEELHTLEGHR 134
Query: 62 GAVWSCCLDTN-ALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLT 119
V++ + + A+ S D + K+W A TG ++F H + +F+ + L+ T
Sbjct: 135 NVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVAT 194
Query: 120 GGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQT---ILSTCTDMGGVRLWDVR 176
G M+ +++D+ + EV G + L + T +++ D + LWDV
Sbjct: 195 GSMDTTAKLWDVESGE----EVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAI-LWDVP 249
Query: 177 SGEIVQTLET-KSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESAS 234
SG V L + ++ + + D I TA + K WDA G + + E
Sbjct: 250 SGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEG-GQCLATLLGHNDEVLD 308
Query: 235 LEPKYGNKFVA-GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGT 293
+ Y + +A D R F T + +GH G + V F+ G + S D T
Sbjct: 309 VCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKT 368
Query: 294 IRIW--QTG 300
R+W +TG
Sbjct: 369 SRVWCVKTG 377
Score = 178 (67.7 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 68/290 (23%), Positives = 122/290 (42%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V + ++ P G + + S D + L + ETG TF GH + + +
Sbjct: 132 GHRNVVYAIAFN--NPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQS 189
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-H-KHIVRACSFSEDTHLLLTGGMEKILRIFDL 131
A+ S D +AK+WD +G+ + + H I+ C F+ L+TG + ++D+
Sbjct: 190 TLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLC-FNTTGDRLVTGSFDHTAILWDV 248
Query: 132 NRPDAPPREV-DRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSP 189
P V G + V + + D ++++T + ++WD G+ + TL
Sbjct: 249 --PSGRKVHVLSGHRGEISCVQF-NWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE 305
Query: 190 VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGG 247
V + G+ I TA DG++ F L + I + G++ +
Sbjct: 306 VLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQ-GSRVLTAS 364
Query: 248 EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
D R + TG + +GH + F+ G++ +GS+D T RIW
Sbjct: 365 VDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 114 (45.2 bits), Expect = 0.00093, P = 0.00093
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 157 DQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWD 214
+Q L C V D R + + L+ P+T+ ++ G +IT + T K WD
Sbjct: 61 EQVKLLICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWD 120
Query: 215 -ANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPV 273
A+ L + + + YG+K G D + + TG +GH +
Sbjct: 121 TASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEI 180
Query: 274 HCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
C+ F+P A+GS D T ++W + ++ TL +
Sbjct: 181 VCLAFNPQSTLVATGSMDTTAKLWDVE--SGEEVSTLAGH 218
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 183 (69.5 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 65/259 (25%), Positives = 110/259 (42%)
Query: 58 EGHKGAVWSCCLDTNALR----AASASADFSAKVWDALTG--DVLHSFE-HKHIVRACSF 110
+ H A+WS TN + S D KVW D+ S E H+ V +
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDI 72
Query: 111 SEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
S + + ++ +R++DL + +D P T+A+ D L+T T +G V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAWTLAF-SPDSQYLATGTHVGKV 130
Query: 171 RLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSY 224
++ V SG+ +L+T+ + S S DG+Y+ + DG + +D L+ + +
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEGH 189
Query: 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
MP I S + P V +D +++ +D N GH V V F P
Sbjct: 190 AMP--IRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTH 246
Query: 285 YASGSEDGTIRIWQTGPVT 303
+ S S D ++++W G T
Sbjct: 247 FVSSSSDKSVKVWDVGTRT 265
Score = 151 (58.2 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 55/236 (23%), Positives = 102/236 (43%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
+ EGH+ V S + AAS+S D ++WD G + S + + +FS D+
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS 118
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L TG + IF + +D + ++A+ + + S D G + ++D
Sbjct: 119 QYLATGTHVGKVNIFGVES-GKKEYSLDTRGKFILSIAYSPDGKYLASGAID-GIINIFD 176
Query: 175 VRSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCT-IE 231
+ +G+++ TLE + P+ S S D + + TA D +K +D H L + + + +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYAS 287
+ + P FV+ D V+ +D T + H V V+++ G S
Sbjct: 237 NVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVS 291
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 42/187 (22%), Positives = 83/187 (44%)
Query: 20 VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASA 79
VD + +PD +L + + + E+G + + + S + AS
Sbjct: 107 VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 80 SADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP 138
+ D ++D TG +LH+ E H +R+ +FS D+ LL+T + ++I+D+ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 139 REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQ 197
+ V VA+ D +S+ +D V++WDV + V T + + V + +
Sbjct: 227 T-LSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFDHQDQVWGVKYNG 284
Query: 198 DGRYITT 204
+G I +
Sbjct: 285 NGSKIVS 291
Score = 112 (44.5 bits), Expect = 0.00084, P = 0.00084
Identities = 30/109 (27%), Positives = 53/109 (48%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ P+ L +SP D L++AS D + + + + GT GH V + +
Sbjct: 188 GHAMPIRSLTFSP---DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGG 121
S+S+D S KVWD T +H+F +H+ V ++ + +++ G
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 293
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 168 (64.2 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 46/179 (25%), Positives = 83/179 (46%)
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL TGG + + ++ +N+P+ + V +V L++ + ++ + G +R+WD+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCI-MSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWDL 92
Query: 176 RSGEIVQTLET-KSPVTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPC-TIES 232
+ +I++TL K+ + S + G ++ + T +K WD G V Y +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
P G + +D V+ +D G ++ GH GPV+ V F P ASGS D
Sbjct: 153 LRFSPD-GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 148 (57.2 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 160 ILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTADGS-TVKFWDANH 217
+L+T D V LW + + +L SPV S ++ I S +++ WD
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 218 FGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCV 276
++++ I S P YG +G +D ++ +D + +GH V C+
Sbjct: 95 AKILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCL 153
Query: 277 RFSPGGESYASGSEDGTIRIW 297
RFSP G+ AS ++D T+++W
Sbjct: 154 RFSPDGKWLASAADDHTVKLW 174
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 185 (70.2 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 63/248 (25%), Positives = 113/248 (45%)
Query: 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDTHL 116
+GH V S + ++ AS+S D + +WDA +GD H + + FS
Sbjct: 82 KGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKY 141
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVR-TVAWLHSDQTILSTCTDMGGVRLWDV 175
+++G + + ++ + A + +D G ++A+ + I S D G + ++DV
Sbjct: 142 VISGLNDGKISMYSVETGKAE-QTLDAQNGKYTLSIAYSPDGKYIASGAID-GIITIFDV 199
Query: 176 RSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESA 233
+G++VQTLE + PV S S + + + TA D +K +D H +V + + +
Sbjct: 200 AAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLC 259
Query: 234 SLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGT 293
+ G F + D V+ +D + H V VR+SPG + AS SED +
Sbjct: 260 VAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKS 319
Query: 294 IRIWQTGP 301
+ I+ P
Sbjct: 320 LNIYYCPP 327
Score = 161 (61.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 56/230 (24%), Positives = 101/230 (43%)
Query: 82 DFSAKVWDALTGDVLHSFEHK---HIVRACSF--SEDTHLLLTGGMEKILRIFDLNRPDA 136
D KVWD + L HK H + S S D + + ++ + ++D D
Sbjct: 61 DDLVKVWDLQEDNTL-KLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDK 119
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP--VTSAE 194
+ P + TV + ++ ++S D G + ++ V +G+ QTL+ ++ S
Sbjct: 120 K-HLLSFGPVDLWTVQFSPCNKYVISGLND-GKISMYSVETGKAEQTLDAQNGKYTLSIA 177
Query: 195 VSQDGRYITTA--DGSTVKFWDANHFGLVKS---YNMPCTIESASLEPKYGNKFVAGGED 249
S DG+YI + DG + +D +V++ + MP + S P + +D
Sbjct: 178 YSPDGKYIASGAIDG-IITIFDVAAGKVVQTLEGHAMP--VRSLCFSPN-SQLLLTASDD 233
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
++ +D + + GH V CV FS G+ +AS S D +++IW T
Sbjct: 234 GHMKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDT 283
Score = 134 (52.2 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 38/119 (31%), Positives = 56/119 (47%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL--DT 71
GH+ PV L +SP + L++AS D L + D +GT GH A W C+
Sbjct: 210 GHAMPVRSLCFSP---NSQLLLTASDDGHMKLYDVTHSDVVGTLSGH--ASWVLCVAFSE 264
Query: 72 NALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIF 129
+ AS+S+D S K+WD LH+F EH V +S + + +K L I+
Sbjct: 265 DGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 132 (51.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 50/207 (24%), Positives = 94/207 (45%)
Query: 117 LLTGGMEKILRIFDLNRPDAPP--REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L+TGG++ +++++DL + ++ V +VA QTI S+ D + LWD
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLD-STMCLWD 113
Query: 175 VRSGEIVQTLETKSPVT--SAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTI 230
RSG+ L PV + + S +Y+ + DG + + ++ +
Sbjct: 114 ARSGDKKHLLSF-GPVDLWTVQFSPCNKYVISGLNDGK-ISMYSVETGKAEQTLDAQNGK 171
Query: 231 ESASLEPKYGNKFVAGGE-DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS 289
+ S+ K++A G D + FD G + +GH PV + FSP + + S
Sbjct: 172 YTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTAS 231
Query: 290 EDGTIRIWQTGPVTNDDTE-TLTANGT 315
+DG ++++ VT+ D TL+ + +
Sbjct: 232 DDGHMKLYD---VTHSDVVGTLSGHAS 255
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/207 (22%), Positives = 95/207 (45%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ VV + ++ DG + S+S DS+ L + +GD +W+
Sbjct: 83 GHALGVVSV---AVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCN 139
Query: 74 LRAASASADFSAKVWDALTGDVLHSFEHKH--IVRACSFSEDTHLLLTGGMEKILRIFDL 131
S D ++ TG + + ++ + ++S D + +G ++ I+ IFD+
Sbjct: 140 KYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDV 199
Query: 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-V 190
+ ++ VR++ + + Q +L T +D G ++L+DV ++V TL + V
Sbjct: 200 AAGKVV-QTLEGHAMPVRSLCFSPNSQLLL-TASDDGHMKLYDVTHSDVVGTLSGHASWV 257
Query: 191 TSAEVSQDGRYITTADG-STVKFWDAN 216
S+DG++ ++ ++VK WD +
Sbjct: 258 LCVAFSEDGKHFASSSSDNSVKIWDTS 284
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 40/166 (24%), Positives = 71/166 (42%)
Query: 20 VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGA-VWSCCLDTNALRAAS 78
VDL+ +P ++IS D + + ETG T + G S + AS
Sbjct: 128 VDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIAS 187
Query: 79 ASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP 137
+ D ++D G V+ + E H VR+ FS ++ LLLT + ++++D+ D
Sbjct: 188 GAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVV 247
Query: 138 PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT 183
+ V VA+ + S+ +D V++WD + + T
Sbjct: 248 GT-LSGHASWVLCVAFSEDGKHFASSSSD-NSVKIWDTSERKCLHT 291
>UNIPROTKB|E1BB53 [details] [associations]
symbol:TEP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005697 "telomerase holoenzyme
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003720 "telomerase activity" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003723 GO:GO:0016363 GO:GO:0000722
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0005697 GO:GO:0003720
GeneTree:ENSGT00690000102183 OMA:SVPDAWK InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
EMBL:DAAA02028332 IPI:IPI00689872 Ensembl:ENSBTAT00000001564
Uniprot:E1BB53
Length = 2627
Score = 198 (74.8 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 84/303 (27%), Positives = 128/303 (42%)
Query: 34 LISASKDSSPM--LRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDAL 91
L+S ++D + L G T + H+ V L T+ A AS DF+ ++W
Sbjct: 1992 LVSGAEDGALQGWLLQGGTLQSLWLLSRHRKPVLG--LATSQELLAIASEDFTVRLWPRQ 2049
Query: 92 -------TGDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREV 141
T D S E H+ V CSFS D L TGG ++ L +D+ P AP
Sbjct: 2050 LLMLPQKTEDFPRSTELRGHEGPVSCCSFSTDGCRLATGGRDRSLLCWDVRTPKAPVLIC 2109
Query: 142 DRSPGS---VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQD 198
S V AW + ++L +C+ G V LWD S + + SA V+ +
Sbjct: 2110 SFSACHRDWVTGCAW--TKDSLLVSCSSDGSVALWDPESRQQLGHFLGHQHAVSAVVAVE 2167
Query: 199 GRYITTADGSTVKFWDANHFGL----VKSYNMPCTIESASLEPKY----GNKFVA----- 245
++ T+K WD H G+ + +++ P + A+LEP+ G++ +
Sbjct: 2168 EHVVSVGRDGTLKVWD--HQGVEMTSIPAHSGPISHCVAALEPRAAGQPGSELLVVTVGL 2225
Query: 246 -GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTN 304
G +W F T + GH GPV S + SEDG++R+WQ P
Sbjct: 2226 DGATRLWHPLLVFQTHTLL----GHSGPVSAAAVSETSGLLLTTSEDGSLRLWQV-PKEA 2280
Query: 305 DDT 307
DDT
Sbjct: 2281 DDT 2283
Score = 142 (55.0 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 52/229 (22%), Positives = 89/229 (38%)
Query: 72 NALRAASASADFSAKVWDALTG-DVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
N RAA +A+ + + D T D V +CSF D L LT + +L ++D
Sbjct: 1696 NGQRAAVGTANGTVYLLDLRTWQDERSMVSGGDGVSSCSFLSDNALFLTA-FDGLLELWD 1754
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPV 190
L ++ + T L D+ +L+T GG++LWDV G++ P+
Sbjct: 1755 LQH-GCRVLQIQAHQYQI-TGCCLSPDRRLLATVCLGGGLKLWDVVRGQLASQHTCPKPL 1812
Query: 191 TSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMP-CTIESASLEPKYGNKFVAGGE 248
+G+ I + F+ + + K P ++ + + G G
Sbjct: 1813 NCVAFHPEGQVIAVGGWAGSFSFFHVDGLRVTKELGAPGASVRTLAFGVP-GRVVAVGRL 1871
Query: 249 DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
D V + + G +A H G V F G + EDG +++W
Sbjct: 1872 DRMVELWAWQEGARLAAFPAHQGFVATALFLRSGCQLLTAGEDGKVQVW 1920
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 50/185 (27%), Positives = 87/185 (47%)
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL TGG + + ++ +N+P+ + V +V L++ + ++ + G +R+WD+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCI-MSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWDL 92
Query: 176 RSGEIVQTLET-KSPVTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPC-TIES 232
+ +I++TL K+ + S + G ++ + T +K WD G V Y +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P G + +D V+ +D G ++ GH GPV+ V F P ASGS D
Sbjct: 153 LRFSPD-GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 293 TIRIW 297
TIR W
Sbjct: 212 TIRFW 216
Score = 164 (62.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 56/255 (21%), Positives = 110/255 (43%)
Query: 77 ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
A+ D +W + + S H V + + L++ G +R++DL
Sbjct: 37 ATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR-SGEIVQTLETKSPVTSAE 194
R + ++ ++ + + + S D ++LWD+R G + + V
Sbjct: 97 IL-RTLMGHKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 195 VSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV--AGGEDMW 251
S DG+++ +A D TVK WD ++ + P ++ + N+++ +G D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEF--PGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 252 VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLT 311
+RF+D ++C +G GPV V F+P G SG +D ++R++ P D L
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFDV-VLV 270
Query: 312 ANGTIGKVKVTADEV 326
+ G + + V D++
Sbjct: 271 SWGKVADLAVCNDQL 285
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 54/207 (26%), Positives = 90/207 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ PV + + TP+ +++ S+ S + + E + T GHK + C LD +
Sbjct: 61 GHTSPVESVRLN--TPEEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANI--CSLDFHP 115
Query: 74 LR--AASASADFSAKVWDALT-GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
AS S D + K+WD G V H VR FS D L + + ++++D
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SP 189
L E G V V + H ++ +L++ + +R WD+ ++V +E + P
Sbjct: 176 LTAGKMMS-EFPGHTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Query: 190 VTSAEVSQDG--RYITTADGSTVKFWD 214
V S + DG Y D V W+
Sbjct: 234 VRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 126 (49.4 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 48/201 (23%), Positives = 85/201 (42%)
Query: 54 IGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE 112
I + GH V S L+T + S S +VWD +L + HK + + F
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
+ +G + ++++D+ R R S +VR + + D L++ D V+L
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRF-SPDGKWLASAADDHTVKL 173
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGS--TVKFWDANHFGLVKSYN-MPC 228
WD+ +G+++ + PV E + Y+ + S T++FWD F +V P
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 229 TIESASLEPKYGNKFVAGGED 249
+ S P G +G +D
Sbjct: 233 PVRSVLFNPD-GCCLYSGCQD 252
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 50/185 (27%), Positives = 87/185 (47%)
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL TGG + + ++ +N+P+ + V +V L++ + ++ + G +R+WD+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCI-MSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWDL 92
Query: 176 RSGEIVQTLET-KSPVTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPC-TIES 232
+ +I++TL K+ + S + G ++ + T +K WD G V Y +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P G + +D V+ +D G ++ GH GPV+ V F P ASGS D
Sbjct: 153 LRFSPD-GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 293 TIRIW 297
TIR W
Sbjct: 212 TIRFW 216
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 55/255 (21%), Positives = 109/255 (42%)
Query: 77 ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
A+ D +W + + S H V + + L++ G +R++DL
Sbjct: 37 ATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR-SGEIVQTLETKSPVTSAE 194
R + ++ ++ + + + S D ++LWD+R G + + V
Sbjct: 97 IL-RTLMGHKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 195 VSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV--AGGEDMW 251
S DG+++ +A D TVK WD ++ + P ++ + N+++ +G D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEF--PGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 252 VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLT 311
+RF+D ++C +G GPV V F+P G SG +D ++R++ P D L
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFDV-VLV 270
Query: 312 ANGTIGKVKVTADEV 326
G + + + D++
Sbjct: 271 NWGKVADLAICNDQL 285
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 54/207 (26%), Positives = 90/207 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ PV + + TP+ +++ S+ S + + E + T GHK + C LD +
Sbjct: 61 GHTSPVESVRLN--TPEEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANI--CSLDFHP 115
Query: 74 LR--AASASADFSAKVWDALT-GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
AS S D + K+WD G V H VR FS D L + + ++++D
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SP 189
L E G V V + H ++ +L++ + +R WD+ ++V +E + P
Sbjct: 176 LTAGKMMS-EFPGHTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Query: 190 VTSAEVSQDG--RYITTADGSTVKFWD 214
V S + DG Y D V W+
Sbjct: 234 VRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 70/273 (25%), Positives = 112/273 (41%)
Query: 54 IGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE 112
I + GH V S L+T + S S +VWD +L + HK + + F
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
+ +G + ++++D+ R R S +VR + + D L++ D V+L
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRF-SPDGKWLASAADDHTVKL 173
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGS--TVKFWDANHFGLVKSYN-MPC 228
WD+ +G+++ + PV E + Y+ + S T++FWD F +V P
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 229 TIESASLEPKYGNKFVAGGEDM-----WV--RFFDFHTGN--EIA----CNKGHHGPVHC 275
+ S P G +G +D W R FD N ++A CN G
Sbjct: 233 PVRSVLFNPD-GCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIG---- 287
Query: 276 VRFSPGGESYASGSEDGTIRIWQTGPVTNDDTE 308
V FS S S D T R+ +TG VT D +
Sbjct: 288 VAFSQSNVS--SYVVDLT-RVTRTGTVTQDPVQ 317
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 191 (72.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 50/185 (27%), Positives = 87/185 (47%)
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL TGG + + ++ +N+P+ + V +V L++ + ++ + G +R+WD+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCI-MSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWDL 92
Query: 176 RSGEIVQTLET-KSPVTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPC-TIES 232
+ +I++TL K+ + S + G ++ + T +K WD G V Y +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P G + +D V+ +D G ++ GH GPV+ V F P ASGS D
Sbjct: 153 LRFSPD-GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 293 TIRIW 297
TIR W
Sbjct: 212 TIRFW 216
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 55/255 (21%), Positives = 109/255 (42%)
Query: 77 ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
A+ D +W + + S H V + + L++ G +R++DL
Sbjct: 37 ATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR-SGEIVQTLETKSPVTSAE 194
R + ++ ++ + + + S D ++LWD+R G + + V
Sbjct: 97 IL-RTLMGHKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 195 VSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV--AGGEDMW 251
S DG+++ +A D TVK WD ++ + P ++ + N+++ +G D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEF--PGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 252 VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLT 311
+RF+D ++C +G GPV V F+P G SG +D ++R++ P D L
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFDV-VLV 270
Query: 312 ANGTIGKVKVTADEV 326
G + + + D++
Sbjct: 271 NWGKVADLAICNDQL 285
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 54/207 (26%), Positives = 90/207 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ PV + + TP+ +++ S+ S + + E + T GHK + C LD +
Sbjct: 61 GHTSPVESVRLN--TPEEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANI--CSLDFHP 115
Query: 74 LR--AASASADFSAKVWDALT-GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
AS S D + K+WD G V H VR FS D L + + ++++D
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SP 189
L E G V V + H ++ +L++ + +R WD+ ++V +E + P
Sbjct: 176 LTAGKMMS-EFPGHTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Query: 190 VTSAEVSQDG--RYITTADGSTVKFWD 214
V S + DG Y D V W+
Sbjct: 234 VRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 126 (49.4 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 48/201 (23%), Positives = 85/201 (42%)
Query: 54 IGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE 112
I + GH V S L+T + S S +VWD +L + HK + + F
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
+ +G + ++++D+ R R S +VR + + D L++ D V+L
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRF-SPDGKWLASAADDHTVKL 173
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGS--TVKFWDANHFGLVKSYN-MPC 228
WD+ +G+++ + PV E + Y+ + S T++FWD F +V P
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 229 TIESASLEPKYGNKFVAGGED 249
+ S P G +G +D
Sbjct: 233 PVRSVLFNPD-GCCLYSGCQD 252
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 191 (72.3 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 50/185 (27%), Positives = 87/185 (47%)
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL TGG + + ++ +N+P+ + V +V L++ + ++ + G +R+WD+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCI-MSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWDL 92
Query: 176 RSGEIVQTLET-KSPVTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPC-TIES 232
+ +I++TL K+ + S + G ++ + T +K WD G V Y +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P G + +D V+ +D G ++ GH GPV+ V F P ASGS D
Sbjct: 153 LRFSPD-GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 293 TIRIW 297
TIR W
Sbjct: 212 TIRFW 216
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 55/255 (21%), Positives = 109/255 (42%)
Query: 77 ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
A+ D +W + + S H V + + L++ G +R++DL
Sbjct: 37 ATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR-SGEIVQTLETKSPVTSAE 194
R + ++ ++ + + + S D ++LWD+R G + + V
Sbjct: 97 IL-RTLMGHKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 195 VSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV--AGGEDMW 251
S DG+++ +A D TVK WD ++ + P ++ + N+++ +G D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEF--PGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 252 VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLT 311
+RF+D ++C +G GPV V F+P G SG +D ++R++ P D L
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWEPERCFDV-VLV 270
Query: 312 ANGTIGKVKVTADEV 326
G + + + D++
Sbjct: 271 NWGKVADLAICNDQL 285
Score = 146 (56.5 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 54/207 (26%), Positives = 90/207 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ PV + + TP+ +++ S+ S + + E + T GHK + C LD +
Sbjct: 61 GHTSPVESVRLN--TPEEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANI--CSLDFHP 115
Query: 74 LR--AASASADFSAKVWDALT-GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
AS S D + K+WD G V H VR FS D L + + ++++D
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SP 189
L E G V V + H ++ +L++ + +R WD+ ++V +E + P
Sbjct: 176 LTAGKMMS-EFPGHTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Query: 190 VTSAEVSQDG--RYITTADGSTVKFWD 214
V S + DG Y D V W+
Sbjct: 234 VRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 129 (50.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 70/273 (25%), Positives = 112/273 (41%)
Query: 54 IGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE 112
I + GH V S L+T + S S +VWD +L + HK + + F
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
+ +G + ++++D+ R R S +VR + + D L++ D V+L
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRF-SPDGKWLASAADDHTVKL 173
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGS--TVKFWDANHFGLVKSYN-MPC 228
WD+ +G+++ + PV E + Y+ + S T++FWD F +V P
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 229 TIESASLEPKYGNKFVAGGEDM-----WV--RFFDFHTGN--EIA----CNKGHHGPVHC 275
+ S P G +G +D W R FD N ++A CN G
Sbjct: 233 PVRSVLFNPD-GCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIG---- 287
Query: 276 VRFSPGGESYASGSEDGTIRIWQTGPVTNDDTE 308
V FS S S D T R+ +TG VT D +
Sbjct: 288 VAFSQSNVS--SYVVDLT-RVTRTGTVTQDPVQ 317
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 191 (72.3 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 50/185 (27%), Positives = 87/185 (47%)
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
LL TGG + + ++ +N+P+ + V +V L++ + ++ + G +R+WD+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCI-MSLTGHTSPVESVR-LNTPEELIVAGSQSGSIRVWDL 92
Query: 176 RSGEIVQTLET-KSPVTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYNMPC-TIES 232
+ +I++TL K+ + S + G ++ + T +K WD G V Y +
Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRC 152
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P G + +D V+ +D G ++ GH GPV+ V F P ASGS D
Sbjct: 153 LRFSPD-GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDR 211
Query: 293 TIRIW 297
TIR W
Sbjct: 212 TIRFW 216
Score = 157 (60.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 50/230 (21%), Positives = 100/230 (43%)
Query: 77 ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
A+ D +W + + S H V + + L++ G +R++DL
Sbjct: 37 ATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAK 96
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR-SGEIVQTLETKSPVTSAE 194
R + ++ ++ + + + S D ++LWD+R G + + V
Sbjct: 97 IL-RTLMGHKANICSLDFHPYGEFVASGSQDTN-IKLWDIRRKGCVFRYRGHSQAVRCLR 154
Query: 195 VSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV--AGGEDMW 251
S DG+++ +A D TVK WD ++ + P ++ + N+++ +G D
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKMMSEF--PGHTGPVNVVEFHPNEYLLASGSSDRT 212
Query: 252 VRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301
+RF+D ++C +G GPV + F+P G SG +D ++R++ P
Sbjct: 213 IRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWEP 261
Score = 145 (56.1 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 54/207 (26%), Positives = 90/207 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ PV + + TP+ +++ S+ S + + E + T GHK + C LD +
Sbjct: 61 GHTSPVESVRLN--TPEEL-IVAGSQSGSIRVWDLEAAKILRTLMGHKANI--CSLDFHP 115
Query: 74 LR--AASASADFSAKVWDALT-GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
AS S D + K+WD G V H VR FS D L + + ++++D
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SP 189
L E G V V + H ++ +L++ + +R WD+ ++V +E + P
Sbjct: 176 LTAGKMMS-EFPGHTGPVNVVEF-HPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGP 233
Query: 190 VTSAEVSQDG--RYITTADGSTVKFWD 214
V S + DG Y D V W+
Sbjct: 234 VRSILFNPDGCCLYSGCQDSLRVYGWE 260
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 70/273 (25%), Positives = 112/273 (41%)
Query: 54 IGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE 112
I + GH V S L+T + S S +VWD +L + HK + + F
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHP 115
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
+ +G + ++++D+ R R S +VR + + D L++ D V+L
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ-AVRCLRF-SPDGKWLASAADDHTVKL 173
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGS--TVKFWDANHFGLVKSYN-MPC 228
WD+ +G+++ + PV E + Y+ + S T++FWD F +V P
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 229 TIESASLEPKYGNKFVAGGEDM-----WV--RFFDF---HTGN--EIA-CNKGHHGPVHC 275
+ S P G +G +D W R FD H G ++A CN G
Sbjct: 233 PVRSILFNPD-GCCLYSGCQDSLRVYGWEPERCFDVVLVHWGKVADLAICNNQLIG---- 287
Query: 276 VRFSPGGESYASGSEDGTIRIWQTGPVTNDDTE 308
V FS S S D T R+ +TG V D +
Sbjct: 288 VAFSQSNVS--SYVVDLT-RVTRTGTVARDPVQ 317
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 189 (71.6 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 67/288 (23%), Positives = 113/288 (39%)
Query: 15 HSRPVVDLFYSPITP-DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
HS V + + P D +++ D + ++ + + T +GH V S
Sbjct: 218 HSASVPGILSLDLCPTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQ 277
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS+D + +VW G+ + H+ V S LL+ ++ D+
Sbjct: 278 AVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQ 337
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ D + G T A H D I T T +++WD++ V S PVT
Sbjct: 338 TGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHSGPVT 397
Query: 192 SAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIESASLE-PKYGNKFVAGGED 249
+ S++G Y+ T A S++K WD K+ + E SL + G GG D
Sbjct: 398 AIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSD 457
Query: 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+R + +E+ H G V V F + AS D +++ +
Sbjct: 458 --IRVYICKQWSEVLNFSDHSGLVTGVAFGEHAQFLASTGMDRSLKFY 503
Score = 188 (71.2 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 60/225 (26%), Positives = 99/225 (44%)
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
LHS I+ DT+ +LTGG +K + +FD R + + V +V + H
Sbjct: 217 LHSASVPGILSLDLCPTDTNKVLTGGADKNVVVFD-RREEQIVATLKGHTKKVSSVIY-H 274
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADGSTVKFWD 214
Q ++ + + +R+W V G VQ + +S VT + G Y+ ++ S ++W
Sbjct: 275 PAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATGDYLLSS--SEDQYWA 332
Query: 215 ANHF--G--LVK--SYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG 268
+ G L K C + A P G F G D ++ +D +A G
Sbjct: 333 FSDIQTGRVLTKVTDETAGCALTCAQFHPD-GLIFGTGTGDSQIKIWDLKERTNVANFPG 391
Query: 269 HHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
H GPV + FS G A+G++D ++++W + N T TL N
Sbjct: 392 HSGPVTAIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTITLDNN 436
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 42/127 (33%), Positives = 58/127 (45%)
Query: 179 EIVQTLETKSPVTSAEVSQDGRYI----TTADGSTVKFWDANHFGLVKSYNMPCTIESAS 234
EI+Q L+ K+ V + E + G+ + A+ + +H GL S ++P I S
Sbjct: 172 EIIQKLQDKATVLTTERKKRGKTVPEELVRAEDLSKYRQVGSHAGL-HSASVP-GILSLD 229
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
L P NK + GG D V FD +A KGH V V + P S S D TI
Sbjct: 230 LCPTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTI 289
Query: 295 RIWQ-TG 300
R+W TG
Sbjct: 290 RVWSVTG 296
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 56/259 (21%), Positives = 103/259 (39%)
Query: 2 DKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK 61
D+++ + GH++ V + Y P F SAS DS+ + + G+ + H+
Sbjct: 251 DRREEQIVATLKGHTKKVSSVIYHPAQAVVF---SASSDSTIRVWSVTGGNCVQVVRAHE 307
Query: 62 GAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSF--EHKHIVRACS-FSEDTHLLL 118
AV L S+S D D TG VL E C+ F D +
Sbjct: 308 SAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFG 367
Query: 119 TGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
TG + ++I+DL S G V +A+ + + + D ++LWD+R
Sbjct: 368 TGTGDSQIKIWDLKERTNVANFPGHS-GPVTAIAFSENGYYLATGAQD-SSLKLWDLRKL 425
Query: 179 EIVQT--LETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
+ +T L+ V S Q G Y+ GS ++ + + V +++ + +
Sbjct: 426 KNFKTITLDNNYEVKSLVFDQSGTYLAVG-GSDIRVYICKQWSEVLNFSDHSGLVTGVAF 484
Query: 237 PKYGNKFVAGGEDMWVRFF 255
++ + G D ++F+
Sbjct: 485 GEHAQFLASTGMDRSLKFY 503
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 185 (70.2 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 60/256 (23%), Positives = 106/256 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
+ + GG++ I I+ L + RE+ G + +L +Q + S+
Sbjct: 110 NYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CA 167
Query: 172 LWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY--NMP 227
LWD+ +G+ T + V S ++ D R +++ A ++ K WD G+ +
Sbjct: 168 LWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIRE-GMCRQTFTGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + P GN F G +D R FD E+ H + C V FS G
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMVYS--HDNIICGITSVAFSKSGR 283
Query: 284 SYASGSEDGTIRIWQT 299
+G +D +W T
Sbjct: 284 LLLAGYDDFNCNVWDT 299
Score = 162 (62.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 63/278 (22%), Positives = 116/278 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D ++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYS 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFAGHT 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGR-YI 202
G V +++ + +S D +LWD+R G QT +S + + +G +
Sbjct: 185 -GDVMSLSLAPDTRLFVSGACD-ASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 203 TTADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ +V S+ N+ C I S + K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFS-KSGRLLLAGYDDFNCNVWDTLK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 149 (57.5 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 49/185 (26%), Positives = 81/185 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D++ L + ETG TF GH G V S L + S + D SAK+WD G
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A F + + TG + R+FDL + D + +V
Sbjct: 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GST 209
A+ S + +L+ D +WD + L + V+ V+ DG + T S
Sbjct: 277 AFSKSGRLLLAGYDDFN-CNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 210 VKFWD 214
+K W+
Sbjct: 336 LKIWN 340
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 183 (69.5 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 65/259 (25%), Positives = 110/259 (42%)
Query: 58 EGHKGAVWSCCLDTNALR----AASASADFSAKVWDALTG--DVLHSFE-HKHIVRACSF 110
+ H A+WS TN + S D KVW D+ S E H+ V +
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDI 72
Query: 111 SEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
S + + ++ +R++DL + +D P T+A+ D L+T T +G V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAWTLAF-SPDSQYLATGTHVGKV 130
Query: 171 RLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSY 224
++ V SG+ +L+T+ + S S DG+Y+ + DG + +D L+ + +
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEGH 189
Query: 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
MP I S + P V +D +++ +D N GH V V F P
Sbjct: 190 AMP--IRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTH 246
Query: 285 YASGSEDGTIRIWQTGPVT 303
+ S S D ++++W G T
Sbjct: 247 FVSSSSDKSVKVWDVGTRT 265
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/246 (23%), Positives = 107/246 (43%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
+ EGH+ V S + AAS+S D ++WD G + S + + +FS D+
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS 118
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L TG + IF + +D + ++A+ + + S D G + ++D
Sbjct: 119 QYLATGTHVGKVNIFGVES-GKKEYSLDTRGKFILSIAYSPDGKYLASGAID-GIINIFD 176
Query: 175 VRSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCT-IE 231
+ +G+++ TLE + P+ S S D + + TA D +K +D H L + + + +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
+ + P FV+ D V+ +D T + H V V+++ G S +D
Sbjct: 237 NVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
Query: 292 GTIRIW 297
I I+
Sbjct: 296 QEIHIY 301
Score = 132 (51.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 43/198 (21%), Positives = 88/198 (44%)
Query: 20 VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASA 79
VD + +PD +L + + + E+G + + + S + AS
Sbjct: 107 VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 80 SADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP 138
+ D ++D TG +LH+ E H +R+ +FS D+ LL+T + ++I+D+ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 139 REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQ 197
+ V VA+ D +S+ +D V++WDV + V T + + V + +
Sbjct: 227 T-LSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFDHQDQVWGVKYNG 284
Query: 198 DG-RYITTADGSTVKFWD 214
+G + ++ D + +D
Sbjct: 285 NGSKIVSVGDDQEIHIYD 302
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 32/118 (27%), Positives = 59/118 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ P+ L +SP D L++AS D + + + + GT GH V + +
Sbjct: 188 GHAMPIRSLTFSP---DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
S+S+D S KVWD T +H+F +H+ V ++ + +++ G ++ + I+D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 190 (71.9 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 79/289 (27%), Positives = 119/289 (41%)
Query: 35 ISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGD 94
I AS D++ + G+ T EGH VW+ N L S D +VW+ TG+
Sbjct: 266 IVASLDNAKIHVYDTNGENQKTLEGHVMGVWAMVPWDNIL--VSGGCDREVRVWNMATGE 323
Query: 95 VLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAW 153
++ H VR S D + ++G + LRI+DL V SVR +A
Sbjct: 324 SIYLLRGHTSTVRCLKMS-DKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQ-ASVRCLA- 380
Query: 154 LHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGST-VKF 212
+H D ++S D R+W + G ++ L A ++ DGR I T T V+
Sbjct: 381 VHGD-IVVSGSYDTTA-RVWSISEGRFLRALSGHFSQIYA-IAFDGRRIATGSLDTSVRI 437
Query: 213 WDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP 272
WD N G + T L+ G+ V GG D VR + I H
Sbjct: 438 WDPNT-GQCHAILQGHTSLVGQLQMS-GDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNS 495
Query: 273 VHCVRFSPGGESYASGSEDGTIRIW--QTGPVTNDDTETLTANGTIGKV 319
V ++F SG DG +++W +TG + E T + T+ +V
Sbjct: 496 VTSLQFD--NNRIVSGGSDGRVKVWCLRTGQLLR---ELSTPSDTVWRV 539
Score = 153 (58.9 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 49/188 (26%), Positives = 92/188 (48%)
Query: 31 GFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDA 90
G ++S S D++ + + G ++ GH +++ D R A+ S D S ++WD
Sbjct: 383 GDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGR--RIATGSLDTSVRIWDP 440
Query: 91 LTGDVLHSF--EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV 148
TG H+ H +V S DT L+TGG + +R++ L R AP + SV
Sbjct: 441 NTGQC-HAILQGHTSLVGQLQMSGDT--LVTGGSDGSVRVWSLTRM-APIHRLAAHDNSV 496
Query: 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYI--TTAD 206
++ + + I+S +D G V++W +R+G++++ L T S ++ + + ++
Sbjct: 497 TSLQF--DNNRIVSGGSD-GRVKVWCLRTGQLLRELSTPSDTVWRVTFEEEKAVIMSSRS 553
Query: 207 GSTV-KFW 213
G TV + W
Sbjct: 554 GRTVMEVW 561
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 65/291 (22%), Positives = 113/291 (38%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
L+S D + N TG+ I GH V C ++ A S S D + ++WD TG
Sbjct: 305 LVSGGCDREVRVWNMATGESIYLLRGHTSTV-RCLKMSDKNTAISGSRDTTLRIWDLRTG 363
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVA 152
H+ VR + D ++++G + R++ ++ R + G +
Sbjct: 364 TCRSVLVGHQASVRCLAVHGD--IVVSGSYDTTARVWSISEG----RFLRALSGHFSQIY 417
Query: 153 WLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTADGSTVK 211
+ D ++T + VR+WD +G+ L+ S V ++S D +DGS V+
Sbjct: 418 AIAFDGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSGDTLVTGGSDGS-VR 476
Query: 212 FWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHG 271
W + + + S + N+ V+GG D V+ + TG +
Sbjct: 477 VWSLTRMAPI--HRLAAHDNSVTSLQFDNNRIVSGGSDGRVKVWCLRTGQLLRELSTPSD 534
Query: 272 PVHCVRFSPGGESYASGSEDGTI-RIWQTGPVTND---DTETLTANGTIGK 318
V V F S T+ +W P D D T+ A+ +I +
Sbjct: 535 TVWRVTFEEEKAVIMSSRSGRTVMEVWSFSPPPEDTEFDAATIGASSSISE 585
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 73/300 (24%), Positives = 123/300 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH V L +S D ++SA+ DS + N T I T + A+ S + +
Sbjct: 413 GHRSDVRTLSFSS---DNIAILSAAADSIKIW-NRSTLQCIRTM-ACEYALCSFFVPGDR 467
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ + +++D +G++L + + H + + S S D +TGG +K ++ +D
Sbjct: 468 -QVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFE 526
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTIL----STCTDMGGVRLWDVRSGEI-VQTLET- 186
R SV+ L D+ +L S + V L D V TL+
Sbjct: 527 LVKDENSTQKRL--SVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFF 584
Query: 187 ------KSPVTSAEVSQDGRYITTADGS-TVKFWDANHFGLVKS-YNMPCTIESASLEPK 238
K PV ++S DG I T VK W + KS + ++ PK
Sbjct: 585 LSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPK 644
Query: 239 YGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
+ F G+D ++ +D I +GHH + C+ SP G+ S S D ++R+W+
Sbjct: 645 -SHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 144 (55.7 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 48/173 (27%), Positives = 75/173 (43%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
+PDG L +D S + + +G+ TF GHK A+ S D R AS S D V
Sbjct: 74 SPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGGRLASGSKDTDIIV 133
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG 146
WD + L+ + HK + F + +LL+T G + +++ +DL+ V
Sbjct: 134 WDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGH--- 190
Query: 147 SVRTVAW---LHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVS 196
RT W L S++ L T +R WD+ + ++ E P E S
Sbjct: 191 --RTEVWGLVLVSEEKRLITGASDSELRAWDISYLQEIEDPEEPEPKKIKESS 241
Score = 97 (39.2 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 187 KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAG 246
+S V + S D I +A ++K W+ + +++ M C S + V G
Sbjct: 415 RSDVRTLSFSSDNIAILSAAADSIKIWNRSTLQCIRT--MACEYALCSFFVPGDRQVVIG 472
Query: 247 GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDD 306
+ ++ +D +GN + H G + + SP + +G D +++ W + D+
Sbjct: 473 TKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF-ELVKDE 531
Query: 307 TET 309
T
Sbjct: 532 NST 534
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 183 (69.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 83/317 (26%), Positives = 132/317 (41%)
Query: 4 KKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDW-IGTFE---- 58
+++ + GHS V L +P PD L+S S+D S +L N D G +
Sbjct: 3 EQLVLRATLEGHSGWVTSLSTAPENPD--ILLSGSRDKSIILWNLVRDDVNYGVAQRRLT 60
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLL 117
GH V C L ++ A SAS D + ++WD G+ H F H V + S S D +
Sbjct: 61 GHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQV 120
Query: 118 LTGGMEKILRIFDLNRPDAPPREVDRSPGS-VRTVAWL-HSDQ-TILSTCTDMGGVRLWD 174
++G +K ++I+++ + D V V + + D T +S D V++WD
Sbjct: 121 VSGSRDKTIKIWNIIG-NCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKA-VKVWD 178
Query: 175 VRSGEIVQTLETKSPVTSA-EVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIE 231
+ + + + + SA +S DG + DG T+ WD N + S I
Sbjct: 179 LETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDG-TLMLWDLNESTHLYSLEAKANIN 237
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEI--------ACNKGHHGPVHCVR--FSPG 281
+ P A G +R FD T ++ K P C+ +SP
Sbjct: 238 ALVFSPNRYWLCAATGSS--IRIFDLETQEKVDELTVDFVGVGKKSSEP-ECISLTWSPD 294
Query: 282 GESYASGSEDGTIRIWQ 298
G++ SG D IR+WQ
Sbjct: 295 GQTLFSGWTDNLIRVWQ 311
Score = 169 (64.5 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 56/202 (27%), Positives = 83/202 (41%)
Query: 112 EDTHLLLTGGMEKILRIFDLNRPDA----PPREVDRSPGSVRTVAWLHSDQTILSTCTDM 167
E+ +LL+G +K + +++L R D R + V A LS D
Sbjct: 26 ENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDK 85
Query: 168 GGVRLWDVRSGEIV-QTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWD--ANHFGLVKS 223
+RLWD+ GE Q + S V S +S D R + + T+K W+ N +
Sbjct: 86 T-IRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITD 144
Query: 224 YNMPCTIESASLEPKYGN-KFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGG 282
+ P N FV+ G D V+ +D T + + GH G V V SP G
Sbjct: 145 GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDG 204
Query: 283 ESYASGSEDGTIRIWQTGPVTN 304
ASG DGT+ +W T+
Sbjct: 205 SLCASGGRDGTLMLWDLNESTH 226
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 48/170 (28%), Positives = 70/170 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V + +SP PD +SA D + + + ET + GH G V + + +
Sbjct: 146 GHSDWVSCVRFSP-NPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDG 204
Query: 74 LRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR 133
AS D + +WD L+S E K + A FS + + L I RIFDL
Sbjct: 205 SLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVFSPNRYWLCAATGSSI-RIFDLET 263
Query: 134 PDAPPR-EVD-------RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
+ VD S ++ W QT+ S TD +R+W V
Sbjct: 264 QEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTD-NLIRVWQV 312
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 183 (69.5 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 70/278 (25%), Positives = 122/278 (43%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
DG + ++ D + L N G + T+ GH V + S D + +WD
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWD 95
Query: 90 ALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDL-NRPDAPPREVDRSPGS 147
TG V+ F H V F+E+ ++L+G ++ +R +D +R P + +D +
Sbjct: 96 VATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDG 155
Query: 148 VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGR--YITTA 205
+ +V SD IL+ D G VR +D+R G++ SP+T S+DG+ I++
Sbjct: 156 ISSVKV--SDHEILAGSVD-GRVRRYDLRMGQVTSDY-VGSPITCTCFSRDGQCTLISSL 211
Query: 206 DGSTVKFWDANHFGLVKSY----NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN 261
D ST++ D + L+ Y N ++ E V+ ED V F+D G+
Sbjct: 212 D-STLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERD--THVVSCSEDGKVFFWDLVEGS 268
Query: 262 -EIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
+A G + V + + P + G+I+ W+
Sbjct: 269 LALALPVGSN-VVQSLAYHPADPCLLTAM-GGSIQYWR 304
Score = 153 (58.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 67/250 (26%), Positives = 104/250 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDT 114
T + +GAV + + + + +D + K+W+ L G +L ++ H + V + S D
Sbjct: 20 TLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDN 79
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L +GG +K + ++D+ R+ G V TV + ILS D VR WD
Sbjct: 80 SHLCSGGGDKTVVLWDVATGQVV-RKFRGHAGKVNTVQFNEEATVILSGSID-SSVRCWD 137
Query: 175 VRSG--EIVQTL-ETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSY-NMPCTI 230
RS E VQTL E + ++S +VS + DG V+ +D + Y P T
Sbjct: 138 CRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGR-VRRYDLRMGQVTSDYVGSPITC 196
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVH---CVRFSPGGESYAS 287
S + G + D +R D TG + GH + C S S
Sbjct: 197 TCFSRD---GQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCC-LSERDTHVVS 252
Query: 288 GSEDGTIRIW 297
SEDG + W
Sbjct: 253 CSEDGKVFFW 262
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 42/157 (26%), Positives = 73/157 (46%)
Query: 181 VQTLET-KSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK 238
++TL+ + V + + DG Y +T T+K W+ L+++Y+ E
Sbjct: 18 LKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH-GYEVLDAAGS 76
Query: 239 YGNKFV-AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ N + +GG D V +D TG + +GH G V+ V+F+ SGS D ++R W
Sbjct: 77 FDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCW 136
Query: 298 QTGPVTNDDTETLT-ANGTIGKVKVTADEV-SRKIEG 332
+ +TL A I VKV+ E+ + ++G
Sbjct: 137 DCRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDG 173
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/228 (24%), Positives = 95/228 (41%)
Query: 86 KVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
+++D +G +L + H + + S S D +TGG +K ++ +D + +
Sbjct: 478 QLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFEL--VTDKNSTQK 535
Query: 145 PGSVRTVAWLHSDQTIL----STCTDMGGVRLWDVRSGEI-VQTLET-------KSPVTS 192
SV+ L D+ +L S + V L D V TL+ K PV
Sbjct: 536 RLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLYGHKLPVLC 595
Query: 193 AEVSQDGRYITTADGS-TVKFWDANHFGLVKS-YNMPCTIESASLEPKYGNKFVAGGEDM 250
++S DG I T VK W + +S + ++ PK + F G+D
Sbjct: 596 MDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPK-SHLFFTAGKDH 654
Query: 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
++ +D I +GHH + C+ SP G+ S S D ++R+W+
Sbjct: 655 KIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 142 (55.0 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 51/178 (28%), Positives = 79/178 (44%)
Query: 2 DKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK 61
D +K L+ G+ + V L P +PDG L +D + + + +G+ TF GHK
Sbjct: 51 DLRKGEKILILQGNKQEVTCL--CP-SPDGLHLAVGYEDGAIRIFSLLSGEGNITFNGHK 107
Query: 62 GAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTG 120
AV S D R AS S D +WD + L+ + HK V F + +LL+T
Sbjct: 108 AAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTS 167
Query: 121 GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAW---LHSDQTILSTCTDMGGVRLWDV 175
G + +++ +DL+ V RT W L S++ L T +R WD+
Sbjct: 168 GKDTMVKWWDLDNQHCFKTMVGH-----RTEVWGLVLVSEEKRLITGAADSELRAWDI 220
Score = 98 (39.6 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 24/121 (19%), Positives = 51/121 (42%)
Query: 187 KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAG 246
+S V + S D + +A ++K W+ + +++ MPC S + V G
Sbjct: 414 RSDVRTLSFSSDNIAVLSAAADSIKIWNRSTLQCIRT--MPCEYALCSFFVPGDRQVVIG 471
Query: 247 GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDD 306
+ ++ +D +G + H G + + SP + +G D ++ W VT+ +
Sbjct: 472 TKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKN 531
Query: 307 T 307
+
Sbjct: 532 S 532
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 187 (70.9 bits), Expect = 8.1e-12, P = 8.1e-12
Identities = 75/301 (24%), Positives = 123/301 (40%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK---GAVW----- 65
G RP+ Y +P+ L++AS L I T GH GA+
Sbjct: 214 GDDRPIS---YCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQA 270
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEK 124
+ L+ + + AS +AD S K+W + + + E H V ++ L T +
Sbjct: 271 TLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDH 330
Query: 125 ILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL 184
R++DL + + S G V + + H D ++ T R+WD+R+G V L
Sbjct: 331 SWRLWDLEVQEEILHQEGHSKG-VHDLHF-HPDGSLAGTGGLDSFARVWDLRTGRCVMFL 388
Query: 185 ETK-SPVTSAEVSQDGRYITTADGSTV-KFWDANHFGLVKSYNMPC---TIESASLEPKY 239
E + S S +G ++ T G K WD + Y +P + S +P
Sbjct: 389 EGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCI--YTIPAHQNLVSSVKFQPND 446
Query: 240 GNKFVAGGEDMWVRFFDFHTG-NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
G+ + G D + + H G + + GH G V V SP G+ A+ S D T ++W
Sbjct: 447 GHYLLTGAYDNTAKIWT-HPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLWM 505
Query: 299 T 299
+
Sbjct: 506 S 506
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 182 (69.1 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 52/205 (25%), Positives = 101/205 (49%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS+ + D+ I+ DG F +S S D S L + G+ I +F GH V+S +
Sbjct: 70 GHSQAINDV---SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDN 126
Query: 74 LRAASASADFSAKVWDALTGD--VLHSFEHKHIVRACSFSEDTH--LLLTGGMEKILRIF 129
+ SAS D + K+W+ L + +H + FS + ++++ G +K+++++
Sbjct: 127 RQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVW 186
Query: 130 DLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP 189
+L D + ++ G + TV + D ++ ++ G +LWDV+ G+ + +LET S
Sbjct: 187 NLKNCDLN-KNLEGHTGVLNTVT-ISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST 244
Query: 190 VTSAEVSQDGRYITTADGSTVKFWD 214
+ S S ++ A ++ W+
Sbjct: 245 INSLCFSPCDYWLCAATDRFIRIWN 269
Score = 123 (48.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 52/210 (24%), Positives = 88/210 (41%)
Query: 101 HKHIVRACSFSEDTHL--LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQ 158
H V + S D L +++ +K L ++++N D E+ + S+ + +D
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDD-DSGEIGTAKKSLTGHSQAINDV 78
Query: 159 TILST-CTDMGG-----VRLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYITTAD-GSTV 210
+I S + G VRLWD+ GE +++ + S V S S D R I +A T+
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 211 KFWD--ANHFGLVKSYNMPCTIESASLEPKYGNKFVAG-GEDMWVRFFDFHTGNEIACNK 267
K W+ A + I P + G D V+ ++ + +
Sbjct: 139 KLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
GH G ++ V SP G ASG +DG ++W
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 182 (69.1 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 52/205 (25%), Positives = 101/205 (49%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS+ + D+ I+ DG F +S S D S L + G+ I +F GH V+S +
Sbjct: 70 GHSQAINDV---SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDN 126
Query: 74 LRAASASADFSAKVWDALTGD--VLHSFEHKHIVRACSFSEDTH--LLLTGGMEKILRIF 129
+ SAS D + K+W+ L + +H + FS + ++++ G +K+++++
Sbjct: 127 RQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVW 186
Query: 130 DLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP 189
+L D + ++ G + TV + D ++ ++ G +LWDV+ G+ + +LET S
Sbjct: 187 NLKNCDLN-KNLEGHTGVLNTVT-ISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST 244
Query: 190 VTSAEVSQDGRYITTADGSTVKFWD 214
+ S S ++ A ++ W+
Sbjct: 245 INSLCFSPCDYWLCAATDRFIRIWN 269
Score = 123 (48.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 52/210 (24%), Positives = 88/210 (41%)
Query: 101 HKHIVRACSFSEDTHL--LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQ 158
H V + S D L +++ +K L ++++N D E+ + S+ + +D
Sbjct: 20 HSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDD-DSGEIGTAKKSLTGHSQAINDV 78
Query: 159 TILST-CTDMGG-----VRLWDVRSGEIVQT-LETKSPVTSAEVSQDGRYITTAD-GSTV 210
+I S + G VRLWD+ GE +++ + S V S S D R I +A T+
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 211 KFWD--ANHFGLVKSYNMPCTIESASLEPKYGNKFVAG-GEDMWVRFFDFHTGNEIACNK 267
K W+ A + I P + G D V+ ++ + +
Sbjct: 139 KLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLE 198
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
GH G ++ V SP G ASG +DG ++W
Sbjct: 199 GHTGVLNTVTISPDGSLCASGGKDGVAKLW 228
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 57/228 (25%), Positives = 96/228 (42%)
Query: 86 KVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
+++D +G++L + + H + + S S D +TGG +K ++ +D R
Sbjct: 479 QLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRL 538
Query: 145 PGSVRTVAWLHSDQTIL----STCTDMGGVRLWDVRSGEI-VQTLET-------KSPVTS 192
SV+ L D+ +L S + V L D V TL+ K PV
Sbjct: 539 --SVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVIC 596
Query: 193 AEVSQDGRYITTADGS-TVKFWDANHFGLVKS-YNMPCTIESASLEPKYGNKFVAGGEDM 250
++S DG I T VK W + KS + ++ PK + F G+D
Sbjct: 597 MDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPK-SHLFFTAGKDH 655
Query: 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
++ +D I +GHH + C+ SP G+ S S D ++R+W+
Sbjct: 656 KIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 143 (55.4 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 52/192 (27%), Positives = 84/192 (43%)
Query: 2 DKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK 61
D +K L+ G + V L P +PDG L +D S + + +G+ TF GHK
Sbjct: 51 DLRKGEKILILQGLKQEVTCL--CP-SPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHK 107
Query: 62 GAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTG 120
A+ + D R AS S D VWD + L+ + HK + F + +LL+T
Sbjct: 108 AAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTS 167
Query: 121 GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAW---LHSDQTILSTCTDMGGVRLWDVRS 177
G + +++ +DL+ V RT W L S++ L T +R+WD+
Sbjct: 168 GKDTMVKWWDLDTQHCFKTMVGH-----RTEVWGLVLLSEEKRLITGASDSELRVWDIAY 222
Query: 178 GEIVQTLETKSP 189
+ ++ E P
Sbjct: 223 LQEIEDPEEPDP 234
Score = 96 (38.9 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 24/123 (19%), Positives = 51/123 (41%)
Query: 187 KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAG 246
+S V + S D + +A ++K W+ + +++ M C S + V G
Sbjct: 415 RSDVRTLSFSSDNIAVLSAAADSIKIWNRSTLQCIRT--MTCEYALCSFFVPGDRQVVIG 472
Query: 247 GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDD 306
+ ++ +D +GN + H G + + SP + +G D +++ W + D+
Sbjct: 473 TKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDF-ELVKDE 531
Query: 307 TET 309
T
Sbjct: 532 NST 534
Score = 82 (33.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 37/173 (21%), Positives = 74/173 (42%)
Query: 45 LRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKH 103
LR GE I +G K V C + L A D S +++ L+G+ +F HK
Sbjct: 52 LRKGEK---ILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 104 IVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163
+ + + L +G + + ++D+ R + ++ +L ++++
Sbjct: 109 AITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYR-LKGHKDAITQALFLREKNLLVTS 167
Query: 164 CTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEV-SQDGRYITTADGSTVKFWD 214
D V+ WD+ + +T+ ++ V + S++ R IT A S ++ WD
Sbjct: 168 GKDTM-VKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWD 219
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 71/259 (27%), Positives = 113/259 (43%)
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEK 124
S C + A+ + D +VWD T + H F H+ + + F+ + + +G +K
Sbjct: 321 SVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDK 380
Query: 125 ILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL 184
+R++D+ + G V TVA + + D VR+WD +G +V+ L
Sbjct: 381 TVRLWDIAEGKLV-YTLSIEDG-VTTVAMSPDGLYVAAGSLDKT-VRVWDTTTGYLVERL 437
Query: 185 ET----KSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKS-YNMP-----C--TIE 231
E K V S + +G+ + + T+K W+ N L + YN C T E
Sbjct: 438 ENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELN---LPRQQYNSAGKGGKCHRTFE 494
Query: 232 -------SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
S L P G+ ++G +D V+F+D TGN +GH V V SP G
Sbjct: 495 GHKDFVLSVCLTPD-GHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNL 553
Query: 285 YASGSEDGTIRIWQTGPVT 303
+A+GS D RIW+ T
Sbjct: 554 FATGSGDMRARIWRYSAYT 572
Score = 149 (57.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 61/261 (23%), Positives = 115/261 (44%)
Query: 21 DLFYSPI--TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAAS 78
DL+ + +PDG +L + ++D + + T F GH+ ++S N AS
Sbjct: 316 DLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIAS 375
Query: 79 ASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP 138
S D + ++WD G ++++ + V + S D + G ++K +R++D
Sbjct: 376 GSGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVE 435
Query: 139 R--EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV-----------RSGEIVQTLE 185
R D SV +VA+ + + ++S D ++LW++ + G+ +T E
Sbjct: 436 RLENPDGHKDSVYSVAFAPNGKELVSGSLDKT-IKLWELNLPRQQYNSAGKGGKCHRTFE 494
Query: 186 T-KSPVTSAEVSQDGRYITTADGST-VKFWD--ANHFGLVKSYNMPCTIESASLEPKYGN 241
K V S ++ DG ++ + V+FWD + ++ + I S + P GN
Sbjct: 495 GHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVI-SVAPSPT-GN 552
Query: 242 KFVAGGEDMWVRFFDF--HTG 260
F G DM R + + +TG
Sbjct: 553 LFATGSGDMRARIWRYSAYTG 573
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/254 (23%), Positives = 106/254 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
+ + GG++ I I++L + RE+ G + +L +Q + S+
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CA 167
Query: 172 LWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY--NMP 227
LWD+ +G+ T + V S ++ D R +++ A ++ K WD G+ +
Sbjct: 168 LWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + P GN F G +D R FD E+ H + C V FS G
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMVYS--HDNIICGITSVAFSKSGR 283
Query: 284 SYASGSEDGTIRIW 297
+G +D +W
Sbjct: 284 LLLAGYDDFNCNVW 297
Score = 164 (62.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 64/278 (23%), Positives = 117/278 (42%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFAGHT 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGR-YI 202
G V +++ + +S D +LWDVR G QT +S + + +G +
Sbjct: 185 -GDVMSLSLAPDTRLFVSGACD-ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 203 TTADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ +V S+ N+ C I S + K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFS-KSGRLLLAGYDDFNCNVWDALK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 150 (57.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 49/185 (26%), Positives = 81/185 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D++ L + ETG TF GH G V S L + S + D SAK+WD G
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A F + + TG + R+FDL + D + +V
Sbjct: 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GST 209
A+ S + +L+ D +WD + L + V+ V+ DG + T S
Sbjct: 277 AFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 210 VKFWD 214
+K W+
Sbjct: 336 LKIWN 340
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/254 (23%), Positives = 106/254 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
+ + GG++ I I++L + RE+ G + +L +Q + S+
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CA 167
Query: 172 LWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY--NMP 227
LWD+ +G+ T + V S ++ D R +++ A ++ K WD G+ +
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + P GN F G +D R FD E+ H + C V FS G
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGR 283
Query: 284 SYASGSEDGTIRIW 297
+G +D +W
Sbjct: 284 LLLAGYDDFNCNVW 297
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/278 (22%), Positives = 114/278 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHT 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGR-YI 202
G V +++ + +S D +LWDVR G QT +S + + +G +
Sbjct: 185 -GDVMSLSLAPDTRLFVSGACD-ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 203 TTADGSTVKFWDANHFGLVKSY---NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D + +Y N+ C I S S K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 148 (57.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 48/185 (25%), Positives = 81/185 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D++ L + ETG TF GH G V S L + S + D SAK+WD G
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A F + + TG + R+FDL + D + +V
Sbjct: 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GST 209
++ S + +L+ D +WD + L + V+ V+ DG + T S
Sbjct: 277 SFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 210 VKFWD 214
+K W+
Sbjct: 336 LKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/254 (23%), Positives = 106/254 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
+ + GG++ I I++L + RE+ G + +L +Q + S+
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CA 167
Query: 172 LWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY--NMP 227
LWD+ +G+ T + V S ++ D R +++ A ++ K WD G+ +
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + P GN F G +D R FD E+ H + C V FS G
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGR 283
Query: 284 SYASGSEDGTIRIW 297
+G +D +W
Sbjct: 284 LLLAGYDDFNCNVW 297
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/278 (22%), Positives = 114/278 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHT 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGR-YI 202
G V +++ + +S D +LWDVR G QT +S + + +G +
Sbjct: 185 -GDVMSLSLAPDTRLFVSGACD-ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 203 TTADGSTVKFWDANHFGLVKSY---NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D + +Y N+ C I S S K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 148 (57.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 48/185 (25%), Positives = 81/185 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D++ L + ETG TF GH G V S L + S + D SAK+WD G
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A F + + TG + R+FDL + D + +V
Sbjct: 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GST 209
++ S + +L+ D +WD + L + V+ V+ DG + T S
Sbjct: 277 SFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 210 VKFWD 214
+K W+
Sbjct: 336 LKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/254 (23%), Positives = 106/254 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
+ + GG++ I I++L + RE+ G + +L +Q + S+
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CA 167
Query: 172 LWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY--NMP 227
LWD+ +G+ T + V S ++ D R +++ A ++ K WD G+ +
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + P GN F G +D R FD E+ H + C V FS G
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGR 283
Query: 284 SYASGSEDGTIRIW 297
+G +D +W
Sbjct: 284 LLLAGYDDFNCNVW 297
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/278 (22%), Positives = 114/278 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHT 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGR-YI 202
G V +++ + +S D +LWDVR G QT +S + + +G +
Sbjct: 185 -GDVMSLSLAPDTRLFVSGACD-ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 203 TTADGSTVKFWDANHFGLVKSY---NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D + +Y N+ C I S S K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 148 (57.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 48/185 (25%), Positives = 81/185 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D++ L + ETG TF GH G V S L + S + D SAK+WD G
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A F + + TG + R+FDL + D + +V
Sbjct: 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GST 209
++ S + +L+ D +WD + L + V+ V+ DG + T S
Sbjct: 277 SFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 210 VKFWD 214
+K W+
Sbjct: 336 LKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/254 (23%), Positives = 106/254 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
+ + GG++ I I++L + RE+ G + +L +Q + S+
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CA 167
Query: 172 LWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY--NMP 227
LWD+ +G+ T + V S ++ D R +++ A ++ K WD G+ +
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + P GN F G +D R FD E+ H + C V FS G
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGR 283
Query: 284 SYASGSEDGTIRIW 297
+G +D +W
Sbjct: 284 LLLAGYDDFNCNVW 297
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/278 (22%), Positives = 114/278 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHT 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGR-YI 202
G V +++ + +S D +LWDVR G QT +S + + +G +
Sbjct: 185 -GDVMSLSLAPDTRLFVSGACD-ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 203 TTADGSTVKFWDANHFGLVKSY---NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D + +Y N+ C I S S K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 148 (57.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 48/185 (25%), Positives = 81/185 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D++ L + ETG TF GH G V S L + S + D SAK+WD G
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A F + + TG + R+FDL + D + +V
Sbjct: 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GST 209
++ S + +L+ D +WD + L + V+ V+ DG + T S
Sbjct: 277 SFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 210 VKFWD 214
+K W+
Sbjct: 336 LKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/254 (23%), Positives = 106/254 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ T++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
+ + GG++ I I++L + RE+ G + +L +Q + S+
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT--CA 167
Query: 172 LWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSY--NMP 227
LWD+ +G+ T + V S ++ D R +++ A ++ K WD G+ +
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + P GN F G +D R FD E+ H + C V FS G
Sbjct: 227 SDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGR 283
Query: 284 SYASGSEDGTIRIW 297
+G +D +W
Sbjct: 284 LLLAGYDDFNCNVW 297
Score = 163 (62.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 63/278 (22%), Positives = 114/278 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHT 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGR-YI 202
G V +++ + +S D +LWDVR G QT +S + + +G +
Sbjct: 185 -GDVMSLSLAPDTRLFVSGACD-ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 203 TTADGSTVKFWDANHFGLVKSY---NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D + +Y N+ C I S S K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS-KSGRLLLAGYDDFNCNVWDALK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH V C+ + G + A+GS D ++IW
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 148 (57.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 48/185 (25%), Positives = 81/185 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D++ L + ETG TF GH G V S L + S + D SAK+WD G
Sbjct: 157 IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A F + + TG + R+FDL + D + +V
Sbjct: 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GST 209
++ S + +L+ D +WD + L + V+ V+ DG + T S
Sbjct: 277 SFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 210 VKFWD 214
+K W+
Sbjct: 336 LKIWN 340
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 76/300 (25%), Positives = 124/300 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK---GAVW----- 65
G RP L Y +P+ L +A L + + + T GH GA+
Sbjct: 228 GDDRP---LSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKA 284
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEK 124
+ LD + AS +AD S K+W + + + E H V + L T +
Sbjct: 285 TVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDH 344
Query: 125 ILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC-TDMGGVRLWDVRSGEIVQT 183
R++DL + + S G V +A+ H+D ++ T D G R+WD+R+G +
Sbjct: 345 SWRLWDLEAQEEILHQEGHSKG-VYDIAF-HTDGSLAGTGGLDAFG-RVWDLRTGRCIMF 401
Query: 184 LETK-SPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYNMPC---TIESASLEPK 238
LE + S +G ++ T G +T K WD + Y +P + EP
Sbjct: 402 LEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCI--YTIPAHQNLVTGVKFEPN 459
Query: 239 YGNKFVAGGEDMWVRFFDFHTG-NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+GN + G D + + H G + + GH G V + S G+ A+ S D T ++W
Sbjct: 460 HGNFLLTGAYDNTAKIWT-HPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLW 518
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 78/301 (25%), Positives = 126/301 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK---GAVW----- 65
G RP+ Y +P+ L +A L + + + T GH GA+
Sbjct: 228 GDDRPIS---YCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKS 284
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRAC--SFSEDTHLLLTGGME 123
+ LD + AS +AD S K+W + + + E H VR ++ L T +
Sbjct: 285 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEG-HTVRVARVTWHPSGRFLGTTCYD 343
Query: 124 KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC-TDMGGVRLWDVRSGEIVQ 182
+ R++DL + + S G V +A+ H D ++ T D G R+WD+R+G +
Sbjct: 344 RSWRLWDLEAQEEILHQEGHSMG-VYDIAF-HQDGSLAGTGGLDAFG-RVWDLRTGRCIM 400
Query: 183 TLETK-SPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYNMPC---TIESASLEP 237
LE + S +G +I T G +T K WD V Y +P + EP
Sbjct: 401 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCV--YTIPAHQNLVTGVKFEP 458
Query: 238 KYGNKFVAGGEDMWVRFFDFHTG-NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296
+GN + G D + + H G + + GH G V + S G+ A+ S D T ++
Sbjct: 459 IHGNFLLTGAYDNTAKIWT-HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 517
Query: 297 W 297
W
Sbjct: 518 W 518
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 71/308 (23%), Positives = 129/308 (41%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
V +GH V + P+ D + I+ S D++ + + TG T GH V +
Sbjct: 134 VINGHLGWVRCVAIDPV--DNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVS 191
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIF 129
S S D + K WD ++ + H VR S L+ T G + +++++
Sbjct: 192 DRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLW 251
Query: 130 DLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKS 188
D+ R P + G + V D ++S+ TD VRLWDV +G+ ++ L K
Sbjct: 252 DM-RTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTD-ATVRLWDVVAGKTMKVLTHHKR 309
Query: 189 PVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGE 248
V + + + +A ++ W L+ ++ T +L + AGG+
Sbjct: 310 SVRATALHPKEFSVASACTDDIRSWGLAEGSLLTNFESEKTGIINTLSINQDDVLFAGGD 369
Query: 249 DMWVRFFDFHTGNE---IACNK--GH-HGP--VHCVRFSPGGESYASGSEDGTIRIWQTG 300
+ + F+D+ +G++ +A + G G V C F G +G D +I+IW+
Sbjct: 370 NGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEADKSIKIWKQD 429
Query: 301 PVTNDDTE 308
++E
Sbjct: 430 ETATKESE 437
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 49/189 (25%), Positives = 85/189 (44%)
Query: 117 LLTGGMEKILRIFDLNRPD--AP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
L+ EK+L RP+ AP R ++ G VR VA D T ++ ++
Sbjct: 110 LIVNRYEKLLS----QRPEWHAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMK 165
Query: 172 LWDVRSGEIVQTLETK-SPVTSAEVSQDGRYI-TTADGSTVKFWDANHFGLVKSYNMPCT 229
+WD+ +G++ TL V VS Y+ + ++ TVK WD +++ Y +
Sbjct: 166 VWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLS 225
Query: 230 -IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASG 288
+ + S+ P + G D ++ +D T + GH GP++ V+ +P S
Sbjct: 226 GVRTVSIHPTL-DLIATAGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSS 284
Query: 289 SEDGTIRIW 297
S D T+R+W
Sbjct: 285 STDATVRLW 293
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 179 (68.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 64/259 (24%), Positives = 110/259 (42%)
Query: 58 EGHKGAVWSCCLDTNALR----AASASADFSAKVWDALTG--DVLHSFE-HKHIVRACSF 110
+ H A+WS +N + S D KVW D+ S E H+ V +
Sbjct: 13 QAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDI 72
Query: 111 SEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
S + + ++ +R++DL + +D P T+A+ D L+T T +G V
Sbjct: 73 SHTLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAWTLAF-SPDSQYLATGTHVGKV 130
Query: 171 RLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSY 224
++ V SG+ +L+T+ + S S DG+Y+ + DG + +D L+ + +
Sbjct: 131 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEGH 189
Query: 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
MP I S + P V +D +++ +D N GH V V F P
Sbjct: 190 AMP--IRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTH 246
Query: 285 YASGSEDGTIRIWQTGPVT 303
+ S S D ++++W G T
Sbjct: 247 FVSSSSDKSVKVWDVGTRT 265
Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 58/246 (23%), Positives = 107/246 (43%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
+ EGH+ V S + AAS+S D ++WD G + S + + +FS D+
Sbjct: 59 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS 118
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L TG + IF + +D + ++A+ + + S D G + ++D
Sbjct: 119 QYLATGTHVGKVNIFGVES-GKKEYSLDTRGKFILSIAYSPDGKYLASGAID-GIINIFD 176
Query: 175 VRSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCT-IE 231
+ +G+++ TLE + P+ S S D + + TA D +K +D H L + + + +
Sbjct: 177 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVL 236
Query: 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSED 291
+ + P FV+ D V+ +D T + H V V+++ G S +D
Sbjct: 237 NVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 295
Query: 292 GTIRIW 297
I I+
Sbjct: 296 QEIHIY 301
Score = 132 (51.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 43/198 (21%), Positives = 88/198 (44%)
Query: 20 VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASA 79
VD + +PD +L + + + E+G + + + S + AS
Sbjct: 107 VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 80 SADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP 138
+ D ++D TG +LH+ E H +R+ +FS D+ LL+T + ++I+D+ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 139 REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQ 197
+ V VA+ D +S+ +D V++WDV + V T + + V + +
Sbjct: 227 T-LSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFDHQDQVWGVKYNG 284
Query: 198 DG-RYITTADGSTVKFWD 214
+G + ++ D + +D
Sbjct: 285 NGSKIVSVGDDQEIHIYD 302
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 32/118 (27%), Positives = 59/118 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ P+ L +SP D L++AS D + + + + GT GH V + +
Sbjct: 188 GHAMPIRSLTFSP---DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 244
Query: 74 LRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
S+S+D S KVWD T +H+F +H+ V ++ + +++ G ++ + I+D
Sbjct: 245 THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 179 (68.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 65/260 (25%), Positives = 114/260 (43%)
Query: 47 NGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-V 105
N E D T EGH+ V S + AAS+S D ++WD TG + S + +
Sbjct: 50 NDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDA 109
Query: 106 RACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT 165
+ +FS D+ L TG + IF + +D + ++A+ + + S
Sbjct: 110 WSLAFSPDSQFLATGSHVGKVNIFGVET-GKKEYSLDTRGKFILSIAYSPDGKYLASGAI 168
Query: 166 DMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKS 223
D G + ++D+ +G+++ TLE + P+ S S D + + TA D +K +D H L +
Sbjct: 169 D-GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 227
Query: 224 YNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGG 282
+ + + + + P FV+ D V+ +D T + H V V+++ G
Sbjct: 228 LSGHGSWVLNVAFCPD-DTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSG 286
Query: 283 ESYASGSEDGTIRIWQTGPV 302
S +D I I+ PV
Sbjct: 287 SKIVSVGDDQEIHIYDC-PV 305
Score = 167 (63.8 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 61/259 (23%), Positives = 111/259 (42%)
Query: 58 EGHKGAVWSCCLDTNALRAA----SASADFSAKVW--DALTGDVLHSFE-HKHIVRACSF 110
+ H A+WS N + S S D KVW + D+ + E H+ V +
Sbjct: 13 QAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 111 SEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
S + + ++ +R++DL + +D P ++A+ D L+T + +G V
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLET-GKQIKSIDAGPVDAWSLAF-SPDSQFLATGSHVGKV 130
Query: 171 RLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSY 224
++ V +G+ +L+T+ + S S DG+Y+ + DG + +D L+ + +
Sbjct: 131 NIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEGH 189
Query: 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
MP I S + P V +D +++ +D N GH V V F P
Sbjct: 190 AMP--IRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTH 246
Query: 285 YASGSEDGTIRIWQTGPVT 303
+ S S D ++++W G T
Sbjct: 247 FVSSSSDKSVKVWDAGTRT 265
Score = 145 (56.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 56/259 (21%), Positives = 112/259 (43%)
Query: 4 KKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGA 63
+K+ + GH VV + I+ G S+S D+ L + ETG I + +
Sbjct: 52 EKLDLQWTLEGHQLGVVSV---DISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVD 108
Query: 64 VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHK-HIVRACSFSEDTHLLLTGGM 122
WS ++ A+ S ++ TG +S + + + + ++S D L +G +
Sbjct: 109 AWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 168
Query: 123 EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQ 182
+ I+ IFD+ ++ +R++ + D +L T +D G ++++DV+ +
Sbjct: 169 DGIINIFDIATGKLL-HTLEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 183 TLETKSP--VTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKY- 239
TL + A D +++++ +VK WDA V ++ + KY
Sbjct: 227 TLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTF---FDHQDQVWGVKYN 283
Query: 240 --GNKFVAGGEDMWVRFFD 256
G+K V+ G+D + +D
Sbjct: 284 GSGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 179 (68.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 65/260 (25%), Positives = 114/260 (43%)
Query: 47 NGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-V 105
N E D T EGH+ V S + AAS+S D ++WD TG + S + +
Sbjct: 50 NDEKLDLQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDA 109
Query: 106 RACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT 165
+ +FS D+ L TG + IF + +D + ++A+ + + S
Sbjct: 110 WSLAFSPDSQFLATGSHVGKVNIFGVET-GKKEYSLDTRGKFILSIAYSPDGKYLASGAI 168
Query: 166 DMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKS 223
D G + ++D+ +G+++ TLE + P+ S S D + + TA D +K +D H L +
Sbjct: 169 D-GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT 227
Query: 224 YNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGG 282
+ + + + + P FV+ D V+ +D T + H V V+++ G
Sbjct: 228 LSGHGSWVLNVAFCPD-DTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSG 286
Query: 283 ESYASGSEDGTIRIWQTGPV 302
S +D I I+ PV
Sbjct: 287 SKIVSVGDDQEIHIYDC-PV 305
Score = 165 (63.1 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 61/259 (23%), Positives = 111/259 (42%)
Query: 58 EGHKGAVWSCCLDTNALRAA----SASADFSAKVW--DALTGDVLHSFE-HKHIVRACSF 110
+ H A+WS N + S S D KVW + D+ + E H+ V +
Sbjct: 13 QAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 111 SEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170
S + + ++ +R++DL + +D P ++A+ D L+T + +G V
Sbjct: 73 SHTGSIAASSSLDAHIRLWDLET-GKQIKSIDAGPVDAWSLAF-SPDSQFLATGSHVGKV 130
Query: 171 RLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYITTA--DGSTVKFWDANHFGLV---KSY 224
++ V +G+ +L+T+ + S S DG+Y+ + DG + +D L+ + +
Sbjct: 131 NIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG-IINIFDIATGKLLHTLEGH 189
Query: 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES 284
MP I S + P V +D +++ +D N GH V V F P
Sbjct: 190 AMP--IRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTH 246
Query: 285 YASGSEDGTIRIWQTGPVT 303
+ S S D ++++W G T
Sbjct: 247 FVSSSSDKSVKVWDAGTRT 265
Score = 145 (56.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 56/259 (21%), Positives = 112/259 (43%)
Query: 4 KKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGA 63
+K+ + GH VV + I+ G S+S D+ L + ETG I + +
Sbjct: 52 EKLDLQWTLEGHQLGVVSV---DISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVD 108
Query: 64 VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHK-HIVRACSFSEDTHLLLTGGM 122
WS ++ A+ S ++ TG +S + + + + ++S D L +G +
Sbjct: 109 AWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 168
Query: 123 EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQ 182
+ I+ IFD+ ++ +R++ + D +L T +D G ++++DV+ +
Sbjct: 169 DGIINIFDIATGKLL-HTLEGHAMPIRSLTF-SPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 183 TLETKSP--VTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKY- 239
TL + A D +++++ +VK WDA V ++ + KY
Sbjct: 227 TLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTF---FDHQDQVWGVKYN 283
Query: 240 --GNKFVAGGEDMWVRFFD 256
G+K V+ G+D + +D
Sbjct: 284 GSGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 184 (69.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 78/301 (25%), Positives = 125/301 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK---GAVW----- 65
G RP+ Y +P+ L +A L + + + T GH GA+
Sbjct: 229 GDDRPIS---YCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKS 285
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACS--FSEDTHLLLTGGME 123
+ LD + AS +AD S K+W + + + E H VR + L T +
Sbjct: 286 TVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEG-HTVRVARVMWHPSGRFLGTTCYD 344
Query: 124 KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC-TDMGGVRLWDVRSGEIVQ 182
+ R++DL + + S G V +A+ H D ++ T D G R+WD+R+G +
Sbjct: 345 RSWRLWDLEAQEEILHQEGHSMG-VYDIAF-HQDGSLAGTGGLDAFG-RVWDLRTGRCIM 401
Query: 183 TLETK-SPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYNMPC---TIESASLEP 237
LE + S +G +I T G +T K WD V Y +P + EP
Sbjct: 402 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCV--YTIPAHQNLVTGVKFEP 459
Query: 238 KYGNKFVAGGEDMWVRFFDFHTG-NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296
+GN + G D + + H G + + GH G V + S G+ A+ S D T ++
Sbjct: 460 IHGNFLLTGAYDNTAKIWT-HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 518
Query: 297 W 297
W
Sbjct: 519 W 519
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 184 (69.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 77/301 (25%), Positives = 128/301 (42%)
Query: 14 GHSRPVVDLFYSPIT--PDGF-FLISASKDSSPMLRNGETGDWIGTFEGHKGAV----WS 66
GH++ V + + P+ DG L+SASKD + + TG GHKG+V W
Sbjct: 236 GHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWG 295
Query: 67 CCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKI 125
T + +AS D + KVWDA+ G +LH + H H V + S D + TG +
Sbjct: 296 AGNGTGVVY--TASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALSTD-FVCRTGFFDHT 352
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD-VRSGE--IVQ 182
+ + + +R + R + + ++S D + L+D + G I +
Sbjct: 353 KTV-PATAEEKTAKAKERYEKAARVGGKIV--ERLVSASDDFT-MYLFDPLNDGTKPIAR 408
Query: 183 TLETKSPVTSAEVSQDGRYITTA--DGSTVKFW---DANHFGLVKSYNMPCTIESASLEP 237
+ + V S DG I +A D +T K W D ++ + P S S +
Sbjct: 409 MIGHQKQVNHVTFSPDGSMIASAGWDNAT-KLWNARDGKFINTLRGHVAPVYQCSFSADS 467
Query: 238 KYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ V +D ++ ++ TG GH V+ V +SP G+ SG D +R+W
Sbjct: 468 RL---LVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Query: 298 Q 298
+
Sbjct: 525 R 525
Score = 163 (62.4 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 78/308 (25%), Positives = 128/308 (41%)
Query: 7 AVPLVCH---GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGA 63
AV + H GH P++ +SP + L + S D++ + + ETG T +GH G
Sbjct: 140 AVSRLAHRIPGHGEPILCAQFSPASSAR--LATGSGDNTARIWDAETGTPKHTLKGHAGW 197
Query: 64 VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI--VRACSFSEDTHL----- 116
V + R A+ S D + ++WD TG + S H V+ ++ E HL
Sbjct: 198 VLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAW-EPLHLWRDGT 256
Query: 117 --LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQT-ILSTCTDMGGVRLW 173
L++ + RI+ +N + GSV V W + T ++ T + V++W
Sbjct: 257 PRLVSASKDFTARIWTVNT-GRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW 315
Query: 174 DVRSGEIVQTLETKSP-VTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIES 232
D G ++ L++ + V +S D T K A K+ E
Sbjct: 316 DAVKGTLLHDLKSHAHWVNHLALSTDF-VCRTGFFDHTKTVPAT--AEEKTAKAKERYEK 372
Query: 233 AS-LEPKYGNKFVAGGEDMWVRFFD-FHTGNE-IACNKGHHGPVHCVRFSPGGESYASGS 289
A+ + K + V+ +D + FD + G + IA GH V+ V FSP G AS
Sbjct: 373 AARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAG 432
Query: 290 EDGTIRIW 297
D ++W
Sbjct: 433 WDNATKLW 440
>MGI|MGI:2145443 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2145443
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
ChiTaRS:UTP15 EMBL:AY151261 EMBL:AK049186 EMBL:AK162794
EMBL:BC034372 EMBL:BC065057 IPI:IPI00226889 RefSeq:NP_849249.1
UniGene:Mm.28221 ProteinModelPortal:Q8C7V3 SMR:Q8C7V3 STRING:Q8C7V3
PhosphoSite:Q8C7V3 PaxDb:Q8C7V3 PRIDE:Q8C7V3
Ensembl:ENSMUST00000040972 GeneID:105372 KEGG:mmu:105372
UCSC:uc007rom.1 InParanoid:Q8C7V3 NextBio:357640 Bgee:Q8C7V3
Genevestigator:Q8C7V3 GermOnline:ENSMUSG00000041747 Uniprot:Q8C7V3
Length = 528
Score = 184 (69.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 56/205 (27%), Positives = 101/205 (49%)
Query: 102 KHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTIL 161
K +F +D LL+ G + ++++FD+N AP R+ + +V TV + + ++
Sbjct: 80 KDTAYCATFRQDGQLLVAGSEDGVVQLFDINGR-APLRQFEGHTKAVHTVDFTADNYHVV 138
Query: 162 STCTDMGGVRLWDVRSGEIVQTLETKSPVT----SAEVSQDGRYITTADGSTVKFWDA-- 215
S D V+LWD+ + + + T + S +++++ D ++T + TVK +DA
Sbjct: 139 SGADDYT-VKLWDIPNSKEILTFKEHSDYVRCGCASKLNPD-LFVTGSYDHTVKIFDART 196
Query: 216 NHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACN-KGHHGPVH 274
N L + P +ES L P G AGG +V+ +D G ++ + K HH V
Sbjct: 197 NKNVLCVEHGQP--VESVLLFPSGGLLVSAGGR--YVKVWDMLKGGQLLVSLKNHHKTVT 252
Query: 275 CVRFSPGGESYASGSEDGTIRIWQT 299
C+ S G+ SGS D ++++ T
Sbjct: 253 CLCLSSSGQRLLSGSLDRKVKVYST 277
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 56/215 (26%), Positives = 99/215 (46%)
Query: 30 DGFFLISASKDSSPMLR--NGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
DG L++ S+D L NG + FEGH AV + + S + D++ K+
Sbjct: 91 DGQLLVAGSEDGVVQLFDINGRAP--LRQFEGHTKAVHTVDFTADNYHVVSGADDYTVKL 148
Query: 88 WDALTGDVLHSF-EHKHIVRA-CSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSP 145
WD + +F EH VR C+ + L +TG + ++IFD R + V+
Sbjct: 149 WDIPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDA-RTNKNVLCVEHGQ 207
Query: 146 GSVRTVAWLHSDQTILSTCTDMGG--VRLWDV-RSGEIVQTLETK-SPVTSAEVSQDG-R 200
V +V S ++S GG V++WD+ + G+++ +L+ VT +S G R
Sbjct: 208 -PVESVLLFPSGGLLVSA----GGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQR 262
Query: 201 YITTADGSTVKFWDANHFGLVKSYNMPCTIESASL 235
++ + VK + + +V S++ +I S +L
Sbjct: 263 LLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLAL 297
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 78/301 (25%), Positives = 125/301 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK---GAVW----- 65
G RP+ Y +P+ L +A L + + + T GH GA+
Sbjct: 244 GDDRPIS---YCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKS 300
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACS--FSEDTHLLLTGGME 123
+ LD + AS +AD S K+W + + + E H VR + L T +
Sbjct: 301 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEG-HTVRVARVMWHPSGRFLGTTCYD 359
Query: 124 KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC-TDMGGVRLWDVRSGEIVQ 182
+ R++DL + + S G V +A+ H D ++ T D G R+WD+R+G +
Sbjct: 360 RSWRLWDLEAQEEILHQEGHSMG-VYDIAF-HQDGSLAGTGGLDAFG-RVWDLRTGRCIM 416
Query: 183 TLETK-SPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYNMPC---TIESASLEP 237
LE + S +G +I T G +T K WD V Y +P + EP
Sbjct: 417 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCV--YTIPAHQNLVTGVKFEP 474
Query: 238 KYGNKFVAGGEDMWVRFFDFHTG-NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296
+GN + G D + + H G + + GH G V + S G+ A+ S D T ++
Sbjct: 475 IHGNFLLTGAYDNTAKIWT-HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 533
Query: 297 W 297
W
Sbjct: 534 W 534
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 78/301 (25%), Positives = 125/301 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK---GAVW----- 65
G RP+ Y +P+ L +A L + + + T GH GA+
Sbjct: 246 GDDRPIS---YCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKS 302
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACS--FSEDTHLLLTGGME 123
+ LD + AS +AD S K+W + + + E H VR + L T +
Sbjct: 303 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEG-HTVRVARVMWHPSGRFLGTTCYD 361
Query: 124 KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC-TDMGGVRLWDVRSGEIVQ 182
+ R++DL + + S G V +A+ H D ++ T D G R+WD+R+G +
Sbjct: 362 RSWRLWDLEAQEEILHQEGHSMG-VYDIAF-HQDGSLAGTGGLDAFG-RVWDLRTGRCIM 418
Query: 183 TLETK-SPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYNMPC---TIESASLEP 237
LE + S +G +I T G +T K WD V Y +P + EP
Sbjct: 419 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCV--YTIPAHQNLVTGVKFEP 476
Query: 238 KYGNKFVAGGEDMWVRFFDFHTG-NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296
+GN + G D + + H G + + GH G V + S G+ A+ S D T ++
Sbjct: 477 IHGNFLLTGAYDNTAKIWT-HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 535
Query: 297 W 297
W
Sbjct: 536 W 536
>CGD|CAL0000290 [details] [associations]
symbol:UTP15 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0034455 "t-UTP complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000290 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0035690 GO:GO:0032040 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K14549 RefSeq:XP_714453.1 RefSeq:XP_714502.1
ProteinModelPortal:Q59Y40 STRING:Q59Y40 GeneID:3643847
GeneID:3643906 KEGG:cal:CaO19.11092 KEGG:cal:CaO19.3609
eggNOG:NOG307830 Uniprot:Q59Y40
Length = 423
Score = 182 (69.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 87/359 (24%), Positives = 152/359 (42%)
Query: 6 IAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVW 65
I L+ H P+ + ++P TP+ F + SA+K + + +T I TF K V+
Sbjct: 31 ITPQLIKENH--PITSIEFNPTTPNDFAIASATKIQ---VFSSKTRQVIKTFSRFKDVVY 85
Query: 66 S--CCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDT-HLLLTG 120
S D L A+ AS S ++D+ ++L S H F + L+TG
Sbjct: 86 SGNYRYDGKLLVASDASGLVS--IYDSYQPRNLLVSLTPSSHPTHVAKFHPTIGNQLITG 143
Query: 121 GMEKILRIFDLNRP-DAPPREVDRSPGS--VRTVAWLHSDQTILST-CTDMGGVRLWDVR 176
+++LR++D+++ + P + D +R+V ++ D ++ T C D G VR+ DVR
Sbjct: 144 SDDRMLRVYDISQTSNGPIIQFDNIDHEDYIRSVNFIPGDSNLIVTGCYD-GNVRILDVR 202
Query: 177 SGE-IVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASL 235
+V + ++PV ++ + +A G VK WD N + N + L
Sbjct: 203 DPHRVVAKFDQENPVEDI-LAVSSNTLVSAGGPYVKIWDLNRMSQIHQLNN-FNKSTTCL 260
Query: 236 EPKYGNKFVAGGEDMWVRFFDFHTGN-EIACN-KGHHGPVHCVRFSPGGES-YASGSEDG 292
+ N + G D ++ FD+ + N ++ K G + C SP + + +G G
Sbjct: 261 SNTHTNGLMVGSLDSTIKVFDYTSTNWQVQFGWKFGSGVLSC-GVSPINQKHFVAGLTSG 319
Query: 293 --TIRIWQTGPVTNDDTETLTANGTIGKVK---VTADEVSRKIEGFHIADEGKMKEKEE 346
+IR +T P + + G +K T +E IE I K E
Sbjct: 320 LISIRTKKTEPKVKQGIKNDVSGGYARMMKGRDYTGEEEDHIIESSKIITNKTNKSVNE 378
>UNIPROTKB|Q59Y40 [details] [associations]
symbol:CaO19.11092 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0035690 "cellular response to drug"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000290 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0035690 GO:GO:0032040 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K14549 RefSeq:XP_714453.1 RefSeq:XP_714502.1
ProteinModelPortal:Q59Y40 STRING:Q59Y40 GeneID:3643847
GeneID:3643906 KEGG:cal:CaO19.11092 KEGG:cal:CaO19.3609
eggNOG:NOG307830 Uniprot:Q59Y40
Length = 423
Score = 182 (69.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 87/359 (24%), Positives = 152/359 (42%)
Query: 6 IAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVW 65
I L+ H P+ + ++P TP+ F + SA+K + + +T I TF K V+
Sbjct: 31 ITPQLIKENH--PITSIEFNPTTPNDFAIASATKIQ---VFSSKTRQVIKTFSRFKDVVY 85
Query: 66 S--CCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-HKHIVRACSFSEDT-HLLLTG 120
S D L A+ AS S ++D+ ++L S H F + L+TG
Sbjct: 86 SGNYRYDGKLLVASDASGLVS--IYDSYQPRNLLVSLTPSSHPTHVAKFHPTIGNQLITG 143
Query: 121 GMEKILRIFDLNRP-DAPPREVDRSPGS--VRTVAWLHSDQTILST-CTDMGGVRLWDVR 176
+++LR++D+++ + P + D +R+V ++ D ++ T C D G VR+ DVR
Sbjct: 144 SDDRMLRVYDISQTSNGPIIQFDNIDHEDYIRSVNFIPGDSNLIVTGCYD-GNVRILDVR 202
Query: 177 SGE-IVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASL 235
+V + ++PV ++ + +A G VK WD N + N + L
Sbjct: 203 DPHRVVAKFDQENPVEDI-LAVSSNTLVSAGGPYVKIWDLNRMSQIHQLNN-FNKSTTCL 260
Query: 236 EPKYGNKFVAGGEDMWVRFFDFHTGN-EIACN-KGHHGPVHCVRFSPGGES-YASGSEDG 292
+ N + G D ++ FD+ + N ++ K G + C SP + + +G G
Sbjct: 261 SNTHTNGLMVGSLDSTIKVFDYTSTNWQVQFGWKFGSGVLSC-GVSPINQKHFVAGLTSG 319
Query: 293 --TIRIWQTGPVTNDDTETLTANGTIGKVK---VTADEVSRKIEGFHIADEGKMKEKEE 346
+IR +T P + + G +K T +E IE I K E
Sbjct: 320 LISIRTKKTEPKVKQGIKNDVSGGYARMMKGRDYTGEEEDHIIESSKIITNKTNKSVNE 378
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 148 (57.2 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 56/228 (24%), Positives = 96/228 (42%)
Query: 86 KVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
+++D +G++L + + H + + S S D +TGG +K ++ +D R
Sbjct: 479 QLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRL 538
Query: 145 PGSVRTVAWLHSDQTIL----STCTDMGGVRLWDVRSGEI-VQTLET-------KSPVTS 192
SV+ L D+ +L S + V L D V TL+ K PV
Sbjct: 539 --SVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVIC 596
Query: 193 AEVSQDGRYITTADGS-TVKFWDANHFGLVKS-YNMPCTIESASLEPKYGNKFVAGGEDM 250
++S DG I T VK W + KS + ++ PK + F G+D
Sbjct: 597 MDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPK-SHLFFTAGKDR 655
Query: 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
++ +D + +GHH + C+ SP G+ S S D ++R+W+
Sbjct: 656 KIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE 703
Score = 143 (55.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 47/166 (28%), Positives = 73/166 (43%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
+PDG L +D S + + +G+ TF GHK AV S D R AS S D V
Sbjct: 74 SPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIV 133
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG 146
WD + L+ + HK + F + +LL++ G + +++ +DL+ V
Sbjct: 134 WDVINESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGH--- 190
Query: 147 SVRTVAW---LHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP 189
RT W L S++ L T +R WD+ E ++ E P
Sbjct: 191 --RTEVWGLVLVSEEKRLITGASDSELRAWDIAYLEEIEDPEEPEP 234
Score = 128 (50.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 59/213 (27%), Positives = 91/213 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ VR SFS D +L+G E I +I+ NR ++ + Q +
Sbjct: 414 HRSDVRTLSFSSDNIAVLSGAAESI-KIW--NRSTLQCIRTMTCEYALCSFFVPGDRQVV 470
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHF 218
+ T T G ++L+D+ SG +++T++ + S +S D R ++T +VKFWD F
Sbjct: 471 IGTKT--GKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWD---F 525
Query: 219 GLVKSYNMP-----------CTIESASLEPKYG--NKFVAGGE-DMWVRFFDFHTGNEIA 264
LVK N ++ L Y K +A D V+ F T
Sbjct: 526 ELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFL 585
Query: 265 CNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
GH PV C+ S G A+GS D ++IW
Sbjct: 586 SLYGHKLPVICMDISYDGALIATGSADRNVKIW 618
Score = 92 (37.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 23/123 (18%), Positives = 50/123 (40%)
Query: 187 KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAG 246
+S V + S D + + ++K W+ + +++ M C S + V G
Sbjct: 415 RSDVRTLSFSSDNIAVLSGAAESIKIWNRSTLQCIRT--MTCEYALCSFFVPGDRQVVIG 472
Query: 247 GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDD 306
+ ++ +D +GN + H G + + SP + +G D +++ W + D+
Sbjct: 473 TKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF-ELVKDE 531
Query: 307 TET 309
T
Sbjct: 532 NST 534
Score = 88 (36.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 40/173 (23%), Positives = 75/173 (43%)
Query: 45 LRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKH 103
LR GE I +G K V C + L A D S +++ L+G+ +F HK
Sbjct: 52 LRKGEK---ILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 104 IVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163
V + + + L +G + + ++D+ R + ++ +L ++S+
Sbjct: 109 AVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYR-LKGHKDAITQALFLREKNLLVSS 167
Query: 164 CTDMGGVRLWDVRSGEIVQTLET-KSPVTSAE-VSQDGRYITTADGSTVKFWD 214
D V+ WD+ + +T+ ++ V VS++ R IT A S ++ WD
Sbjct: 168 GKDTM-VKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 178 (67.7 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 72/281 (25%), Positives = 125/281 (44%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC--LDTNALRAASASADFSAKV 87
DG + ++ D + L N G + T+ GH V D ++L S D + +
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSL--CSGGGDKAVVL 93
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN--RPDAPPREVDRS 144
WD +G V+ F H V F+E+ ++L+G ++ +R +D RP+ P + +D +
Sbjct: 94 WDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPE-PVQTLDEA 152
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGR--YI 202
+ +V SD +LS D G VR +D+R G++ SP+T S+DG+ +
Sbjct: 153 RDGISSVKV--SDHEVLSGSVD-GRVRRYDLRMGQLFSDY-VGSPITCTCFSRDGQCTLV 208
Query: 203 TTADGSTVKFWDANHFGLVKSY----NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258
++ D ST++ D + L+ Y N ++ E V+ ED V F+D
Sbjct: 209 SSLD-STLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERD--THVVSCSEDGKVYFWDLV 265
Query: 259 TGN-EIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
G +A G G V + + P E + G++ W+
Sbjct: 266 EGALALALPVGP-GVVQSLAYHPT-EPCLLTAMGGSVHCWR 304
Score = 158 (60.7 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 67/252 (26%), Positives = 105/252 (41%)
Query: 54 IGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE 112
+ T + +GAV + + + + +D + K+W+ L G +L ++ H + V + S
Sbjct: 18 VKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSF 77
Query: 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172
D L +GG +K + ++D+ R+ G V TV + ILS D +R
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVV-RKFRGHAGKVNTVQFNEEATVILSGSID-SSIRC 135
Query: 173 WDVRSG--EIVQTL-ETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSY-NMPC 228
WD RS E VQTL E + ++S +VS + DG V+ +D L Y P
Sbjct: 136 WDCRSRRPEPVQTLDEARDGISSVKVSDHEVLSGSVDGR-VRRYDLRMGQLFSDYVGSPI 194
Query: 229 TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVH---CVRFSPGGESY 285
T S + G + D +R D TG + GH + C S
Sbjct: 195 TCTCFSRD---GQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCC-LSERDTHV 250
Query: 286 ASGSEDGTIRIW 297
S SEDG + W
Sbjct: 251 VSCSEDGKVYFW 262
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 181 VQTLET-KSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK 238
V+TL+ + V + + DG Y +T T+K W+ L+++Y+ E
Sbjct: 18 VKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH-GYEVLDAAGS 76
Query: 239 YGNKFV-AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ N + +GG D V +D +G + +GH G V+ V+F+ SGS D +IR W
Sbjct: 77 FDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCW 136
Query: 298 QTGPVTNDDTETLT-ANGTIGKVKVTADEV-SRKIEG 332
+ +TL A I VKV+ EV S ++G
Sbjct: 137 DCRSRRPEPVQTLDEARDGISSVKVSDHEVLSGSVDG 173
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 178 (67.7 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 73/281 (25%), Positives = 126/281 (44%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC--LDTNALRAASASADFSAKV 87
DG + ++ D + L N G + T+ GH V D ++L S D + +
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSL--CSGGGDKAVVL 93
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN--RPDAPPREVDRS 144
WD +G V+ F H V F+E+ ++L+G ++ +R +D RP+ P + +D +
Sbjct: 94 WDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPE-PVQTLDEA 152
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGR--YI 202
V +V SD IL+ D G VR +D+R G++ SP+T S+DG+ +
Sbjct: 153 RDGVSSVKV--SDHEILAGSVD-GRVRRYDLRMGQLFSDY-VGSPITCTCFSRDGQCTLV 208
Query: 203 TTADGSTVKFWDANHFGLVKSY----NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258
++ D ST++ D + L+ Y N ++ E V+ ED V F+D
Sbjct: 209 SSLD-STLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERD--THVVSCSEDGKVFFWDLV 265
Query: 259 TGN-EIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
G +A G G V + + P E + G+++ W+
Sbjct: 266 EGALALALPVGS-GVVQSLAYHPT-EPCLLTAMGGSVQCWR 304
Score = 164 (62.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 69/250 (27%), Positives = 105/250 (42%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDT 114
T + +GAV + + + + +D + K+W+ L G +L ++ H + V + S D
Sbjct: 20 TLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDN 79
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L +GG +K + ++D+ R+ G V TV + ILS D +R WD
Sbjct: 80 SSLCSGGGDKAVVLWDVASGQVV-RKFRGHAGKVNTVQFNEEATVILSGSID-SSIRCWD 137
Query: 175 VRSG--EIVQTL-ETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSY-NMPCTI 230
RS E VQTL E + V+S +VS + DG V+ +D L Y P T
Sbjct: 138 CRSRRPEPVQTLDEARDGVSSVKVSDHEILAGSVDGR-VRRYDLRMGQLFSDYVGSPITC 196
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVH---CVRFSPGGESYAS 287
S + G + D +R D TG + KGH + C S S
Sbjct: 197 TCFSRD---GQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCC-LSERDTHVVS 252
Query: 288 GSEDGTIRIW 297
SEDG + W
Sbjct: 253 CSEDGKVFFW 262
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/157 (26%), Positives = 73/157 (46%)
Query: 181 VQTLET-KSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK 238
++TL+ + V + + DG Y +T T+K W+ L+++Y+ E
Sbjct: 18 LKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH-GYEVLDAAGS 76
Query: 239 YGNKFV-AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ N + +GG D V +D +G + +GH G V+ V+F+ SGS D +IR W
Sbjct: 77 FDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCW 136
Query: 298 QTGPVTNDDTETLT-ANGTIGKVKVTADEV-SRKIEG 332
+ +TL A + VKV+ E+ + ++G
Sbjct: 137 DCRSRRPEPVQTLDEARDGVSSVKVSDHEILAGSVDG 173
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 179 (68.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 60/254 (23%), Positives = 105/254 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ ++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ + GG++ I I++L + R PG ++ D I+++ D L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTT-CAL 168
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSYNMPCT- 229
WD+ + + T S V S +S D R +++ A ++ K WD +S+ +
Sbjct: 169 WDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSD 228
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESY 285
I + S P G F G +D R FD E+ H + C V FS G
Sbjct: 229 INAVSFFPN-GYAFATGSDDATCRLFDLRADQELLLYS--HDNIICGITSVAFSKSGRLL 285
Query: 286 ASGSEDGTIRIWQT 299
+G +D +W T
Sbjct: 286 LAGYDDFNCNVWDT 299
Score = 174 (66.3 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 66/278 (23%), Positives = 119/278 (42%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D+ ++ + G + ++D+ S
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSG-DTTCALWDIETAQQTTTFTGHS 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDG-RYI 202
G V +++ +T +S D +LWD+R G Q+ S + + +G +
Sbjct: 185 -GDVMSLSLSPDMRTFVSGACDASS-KLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFA 242
Query: 203 TTADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ L+ S+ N+ C I S + K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFS-KSGRLLLAGYDDFNCNVWDTLK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G+ GH V C+ + G + A+GS D +RIW
Sbjct: 302 GDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 151 (58.2 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 51/186 (27%), Positives = 82/186 (44%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D++ L + ET TF GH G V S L + S + D S+K+WD G
Sbjct: 157 IVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR--EVDRSPGSVRT 150
SF H + A SF + + TG + R+FDL R D D + +
Sbjct: 217 MCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDL-RADQELLLYSHDNIICGITS 275
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GS 208
VA+ S + +L+ D +WD G+ L + V+ V+ DG + T S
Sbjct: 276 VAFSKSGRLLLAGYDDFN-CNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 209 TVKFWD 214
++ W+
Sbjct: 335 FLRIWN 340
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 179 (68.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 60/256 (23%), Positives = 106/256 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ ++ SAS D VWD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ GG++ + I++L + R PG ++ D I+++ DM L
Sbjct: 110 SYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMS-CGL 168
Query: 173 WDVRSG-EIVQTLETKSPVTSAEVS-QDGRYITTADGSTVKFWDANHFGLVKSYNMP--- 227
WD+ +G ++ L V + ++ Q +++ A ++ K WD G+ K P
Sbjct: 169 WDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIRE-GVCKQ-TFPGHE 226
Query: 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGE 283
I + + P G F G +D R FD E+A H + C V FS G
Sbjct: 227 SDINAVTFFPN-GQAFATGSDDATCRLFDIRADQELAMYS--HDNIICGITSVAFSKSGR 283
Query: 284 SYASGSEDGTIRIWQT 299
+G +D +W T
Sbjct: 284 LLLAGYDDFNCNVWDT 299
Score = 162 (62.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 60/274 (21%), Positives = 112/274 (40%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT- 92
L+SAS+D ++ + T + + V +C + A D +++ T
Sbjct: 70 LVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTR 129
Query: 93 -GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV 148
G+V S E H + C F +D ++ + G + ++D+ + + G V
Sbjct: 130 EGNVRVSRELPGHGGYLSCCRFLDDNQIVTSSG-DMSCGLWDIETGLQVTSFLGHT-GDV 187
Query: 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGR-YITTAD 206
++ +T +S D +LWD+R G QT +S + + +G+ + T +D
Sbjct: 188 MALSLAPQCKTFVSGACD-ASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSD 246
Query: 207 GSTVKFWDAN---HFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEI 263
+T + +D + N+ C I S + K G +AG +D +D
Sbjct: 247 DATCRLFDIRADQELAMYSHDNIICGITSVAFS-KSGRLLLAGYDDFNCNVWDTMKAERS 305
Query: 264 ACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
GH V C+ + G + A+GS D +R+W
Sbjct: 306 GILAGHDNRVSCLGVTENGMAVATGSWDSFLRVW 339
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 46/185 (24%), Positives = 81/185 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
++++S D S L + ETG + +F GH G V + L S + D SAK+WD G
Sbjct: 157 IVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP-DAPPREVDRSPGSVRTV 151
+F H+ + A +F + TG + R+FD+ + D + +V
Sbjct: 217 VCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSV 276
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GST 209
A+ S + +L+ D +WD E L + V+ V+++G + T S
Sbjct: 277 AFSKSGRLLLAGYDDFN-CNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATGSWDSF 335
Query: 210 VKFWD 214
++ W+
Sbjct: 336 LRVWN 340
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 185 (70.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 59/222 (26%), Positives = 99/222 (44%)
Query: 96 LHSFEHKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLN-RP-------DA-PPREVDRS- 144
+++F + + C F++D+ L+ G + ++++ L+ +P D P+E R
Sbjct: 454 MYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKL 513
Query: 145 ---PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS-GEIVQTLETKSPVTSAEVSQDGR 200
G V V++ ++ +LS C++ VRLW + + +V PV + S G
Sbjct: 514 IGHSGPVYGVSFSPDNKYLLS-CSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGH 572
Query: 201 YITTAD-GSTVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFH 258
Y TA T + W +H ++ + ++ P N G D R +D H
Sbjct: 573 YFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPN-SNYVFTGSSDKTCRMWDVH 631
Query: 259 TGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300
TGN + GH V+C+ SP G ASG EDG I +W G
Sbjct: 632 TGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIG 673
Score = 154 (59.3 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 54/206 (26%), Positives = 100/206 (48%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS PV + +SP D +L+S S+D + L + +T + +++GH VW
Sbjct: 515 GHSGPVYGVSFSP---DNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLG 571
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+AS D +A++W L F H + V F +++ + TG +K R++D++
Sbjct: 572 HYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVH 631
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE--TKSPV 190
+ R SV +A + D L++ + G + +WD+ SG ++++ ++ +
Sbjct: 632 TGNCV-RVFLGHTNSVNCLA-VSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASL 689
Query: 191 TSAEVSQDGRYITT--ADGSTVKFWD 214
S S+DG + + AD S V+ WD
Sbjct: 690 YSLAFSRDGTVLVSGCADNS-VRVWD 714
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 59/242 (24%), Positives = 96/242 (39%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA---------PPREVDRSPGSVRTV 151
H V SFS D LL+ +K +R++ L+ A P +V SP V
Sbjct: 516 HSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFV 575
Query: 152 AWLHSDQTILSTCTDMGGVRLWDVR--SGEIVQTLETKSPVTSAEVSQDGRYITTADGS- 208
H DQT TD ++ +R +G I + V E + Y+ T
Sbjct: 576 TASH-DQTARLWATD----HIYPLRIFAGHI-------NDVDCVEFHPNSNYVFTGSSDK 623
Query: 209 TVKFWDANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK 267
T + WD + V+ + ++ ++ P G +GGED + +D +G + +
Sbjct: 624 TCRMWDVHTGNCVRVFLGHTNSVNCLAVSPD-GRWLASGGEDGIICVWDIGSGRRLKSMR 682
Query: 268 GH-HGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTND-DTETLTANGTIGKVKVTADE 325
GH ++ + FS G SG D ++R+W TND E N + + +D
Sbjct: 683 GHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTNDAGPEPEAFNNNVNGNETNSDG 742
Query: 326 VS 327
S
Sbjct: 743 TS 744
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 182 (69.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 64/270 (23%), Positives = 104/270 (38%)
Query: 15 HSRPVVDLFYSPITP-DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
HS + + + P D +++ D + ++ + + + T +GH V S +
Sbjct: 218 HSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQ 277
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS D + ++W + H+ V S LL+ ++ D+
Sbjct: 278 DLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQ 337
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ D S G T A H D I T T +++WD++ V S P+T
Sbjct: 338 TGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPIT 397
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGED 249
S S++G Y+ TA D S+VK WD K+ + E SL ++A GG D
Sbjct: 398 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 457
Query: 250 M-------WVRFFDF--HTGNEIACNKGHH 270
+ W F H+G GHH
Sbjct: 458 VQIYICKQWTEILHFTEHSGLTTGVAFGHH 487
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 54/223 (24%), Positives = 94/223 (42%)
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
LHS I+ DT+ +LTGG +K + +FD + S V +V + H
Sbjct: 217 LHSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSK-KVTSVVF-H 274
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFW 213
Q ++ + + +R+W V + VQ + + VT + G Y+ +++D F
Sbjct: 275 PSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFS 334
Query: 214 DANHFGL---VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
D + V + C + A P G F G D ++ +D +A GH
Sbjct: 335 DIQTGRVLTKVTDESSGCALTCAQFHPD-GLIFGTGTMDSQIKIWDLKERTNVANFPGHS 393
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
GP+ + FS G A+ ++D ++++W + N T L N
Sbjct: 394 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 436
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 61/260 (23%), Positives = 106/260 (40%)
Query: 2 DKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK 61
DK + GHS+ V + + P + D F SAS D++ + + + H+
Sbjct: 251 DKSSEQILATLKGHSKKVTSVVFHP-SQDLVF--SASPDATIRIWSVPNASCVQVVRAHE 307
Query: 62 GAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSF--EHKHIVRACS-FSEDTHLLL 118
G+V L S+S D D TG VL E C+ F D +
Sbjct: 308 GSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFG 367
Query: 119 TGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG 178
TG M+ ++I+DL S G + ++A+ + L+T D V+LWD+R
Sbjct: 368 TGTMDSQIKIWDLKERTNVANFPGHS-GPITSIAFSENGY-YLATAADDSSVKLWDLRKL 425
Query: 179 EIVQTLETKS--PVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLE 236
+ +TL+ + V S Q G Y+ G+ V+ + + + + + +
Sbjct: 426 KNFKTLQLDNNFEVKSLIFDQSGTYLALG-GTDVQIYICKQWTEILHFTEHSGLTTGVAF 484
Query: 237 PKYGNKFVAG-GEDMWVRFF 255
+ KF+A G D ++F+
Sbjct: 485 GHHA-KFIASTGMDRSLKFY 503
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 177 (67.4 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 71/278 (25%), Positives = 122/278 (43%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
DG + ++ D + L N G + T+ GH V + S D + +WD
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWD 95
Query: 90 ALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDL-NRPDAPPREVDRSPGS 147
TG V+ F H V F+E+ ++L+G ++ +R +D +R P + +D +
Sbjct: 96 VATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDG 155
Query: 148 VRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGR--YITTA 205
+ +V SD IL+ D G VR +D+R G++ SP+T S+DG+ I++
Sbjct: 156 ISSVKV--SDHEILAGSVD-GRVRRYDLRMGQVSSDY-VGSPITCTCFSRDGQCTLISSL 211
Query: 206 DGSTVKFWDANHFGLVKSY----NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN 261
D ST++ D + L+ Y N ++ E V+ ED V F+D G
Sbjct: 212 D-STLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERD--THVVSCSEDGKVFFWDLVEGA 268
Query: 262 -EIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
+A G + V + + P E + G+I+ W+
Sbjct: 269 LALALPVGSN-VVQSLAYHPT-EPCLLTAMGGSIQYWR 304
Score = 154 (59.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 70/251 (27%), Positives = 106/251 (42%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDT 114
T + +GAV + + + + +D + K+W+ L G +L ++ H + V + S D
Sbjct: 20 TLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDN 79
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L +GG +K + ++D+ R+ G V TV + ILS D VR WD
Sbjct: 80 SHLCSGGGDKTVVLWDVATGQVV-RKFRGHAGKVNTVQFNEEATVILSGSID-SSVRCWD 137
Query: 175 VRSG--EIVQTL-ETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKS-Y-NMPCT 229
RS E VQTL E + ++S +VS + DG V+ +D G V S Y P T
Sbjct: 138 CRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGR-VRRYDLR-MGQVSSDYVGSPIT 195
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVH---CVRFSPGGESYA 286
S + G + D +R D TG + GH + C S
Sbjct: 196 CTCFSRD---GQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCC-LSERDTHVV 251
Query: 287 SGSEDGTIRIW 297
S SEDG + W
Sbjct: 252 SCSEDGKVFFW 262
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 42/157 (26%), Positives = 74/157 (47%)
Query: 181 VQTLE-TKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK 238
++TL+ ++ V + + DG Y +T T+K W+ L+++Y+ E
Sbjct: 18 MKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH-GYEVLDAAGS 76
Query: 239 YGNKFV-AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ N + +GG D V +D TG + +GH G V+ V+F+ SGS D ++R W
Sbjct: 77 FDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCW 136
Query: 298 QTGPVTNDDTETLT-ANGTIGKVKVTADEV-SRKIEG 332
+ +TL A I VKV+ E+ + ++G
Sbjct: 137 DCRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDG 173
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 183 (69.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 66/246 (26%), Positives = 111/246 (45%)
Query: 78 SASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA 136
+ + D K+WD T V + F H+ + + FS + +++G ++ R++D+
Sbjct: 377 TGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQC 436
Query: 137 PPR-EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAE 194
+ E++ V +A +DQ I D +R+W V SG +V+ LE K V S
Sbjct: 437 ILKLEIENG---VTAIAISPNDQFIAVGSLDQI-IRVWSV-SGTLVERLEGHKESVYSIA 491
Query: 195 VSQDGRYITTAD-GSTVKFWD---ANHFGL--VKSYNMPCT---------IESASLEP-- 237
S D + + T+K W+ GL +K + C + S ++ P
Sbjct: 492 FSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGI-CKATYTGHTDFVLSVAVSPDS 550
Query: 238 KYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
++G ++G +D ++F+D TG +GH V V FSP G +ASGS D RIW
Sbjct: 551 RWG---LSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Query: 298 QTGPVT 303
P +
Sbjct: 608 SIDPAS 613
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 53/213 (24%), Positives = 98/213 (46%)
Query: 94 DVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGS-----V 148
+++H+ EH +V FS + L TG + +FD+ + SP V
Sbjct: 305 NLVHTLEHPSVVCCVKFSNNGKYLATG-CNQAANVFDVQTGKKLFTLHEESPDPSRDLYV 363
Query: 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADG 207
RT+A+ D L T T+ ++LWD+ + ++ + + S + S +GR+I + G
Sbjct: 364 RTIAF-SPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 208 S-TVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGE-DMWVRFFDFHTGNEIAC 265
T + WD + + + + ++ P ++F+A G D +R + +G +
Sbjct: 423 DRTARLWDVETGQCILKLEIENGVTAIAISPN--DQFIAVGSLDQIIRVWSV-SGTLVER 479
Query: 266 NKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
+GH V+ + FSP SGS D TI++W+
Sbjct: 480 LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWE 512
Score = 154 (59.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 61/259 (23%), Positives = 116/259 (44%)
Query: 18 PVVDLFYSPI--TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALR 75
P DL+ I +PDG +L++ ++D L + T F GH+ ++S N
Sbjct: 357 PSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRF 416
Query: 76 AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
S S D +A++WD TG + E ++ V A + S + + G +++I+R++ ++
Sbjct: 417 IVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTL 476
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP------ 189
E + SV ++A+ +LS D +++W++++ V K
Sbjct: 477 VERLEGHKE--SVYSIAFSPDSSILLSGSLDKT-IKVWELQATRSVGLSAIKPEGICKAT 533
Query: 190 -------VTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPC-----TIESASLE 236
V S VS D R+ ++ + +++FWD G +SY + C ++ S
Sbjct: 534 YTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQT-G--QSY-LTCQGHKNSVISVCFS 589
Query: 237 PKYGNKFVAGGEDMWVRFF 255
P G +F +G D+ R +
Sbjct: 590 PD-GRQFASGSGDLRARIW 607
>UNIPROTKB|G3V5X7 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008858 InterPro:IPR015943
Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50988 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723 GO:GO:0030529
EMBL:AL355075 InterPro:IPR007111 PROSITE:PS50837 HGNC:HGNC:11726
ChiTaRS:TEP1 InterPro:IPR025139 InterPro:IPR008850 Pfam:PF13271
Pfam:PF05386 PROSITE:PS51226 Ensembl:ENST00000556935
ArrayExpress:G3V5X7 Bgee:G3V5X7 Uniprot:G3V5X7
Length = 2519
Score = 190 (71.9 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 66/220 (30%), Positives = 101/220 (45%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRT----VAWLHS 156
H+ V CSFS D L TGG ++ L +D+ P P + P R AW
Sbjct: 1952 HEGPVSCCSFSTDGGSLATGGRDRSLLCWDVRTPKTPVL-IHSFPACHRDWVTGCAWT-K 2009
Query: 157 DQTILSTCTDMGGVRLWDVRSGE-IVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDA 215
D ++S C+ G V LWD SG+ + Q L +S V++ ++ + DG T+K WD
Sbjct: 2010 DNLLIS-CSSDGSVGLWDPESGQRLGQFLGHQSAVSAVAAVEEHVVSVSRDG-TLKVWDH 2067
Query: 216 NHFGL--VKSYNMPCTIESASLEPKY----GNKF--VAGGEDMWVRFFDFHTGNEIACNK 267
L + +++ P + +A++EP+ G++ V G D R + +
Sbjct: 2068 QGVELTSIPAHSGPISHCAAAMEPRAAGQPGSELLVVTVGLDGATRLWHPLLVCQTHTLL 2127
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDT 307
GH GPV S + SEDG++R+WQ P DDT
Sbjct: 2128 GHSGPVRAAAVSETSGLMLTASEDGSVRLWQV-PKEADDT 2166
Score = 150 (57.9 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 55/187 (29%), Positives = 86/187 (45%)
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFE----------HKHIVRACSFSEDTHLLL 118
L T+ ASAS DF+ ++W H E H+ V CSFS D L
Sbjct: 1910 LATSQELLASASEDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEGPVSCCSFSTDGGSLA 1969
Query: 119 TGGMEKILRIFDLNRPDAPPREVDRSPGSVRT----VAWLHSDQTILSTCTDMGGVRLWD 174
TGG ++ L +D+ P P + P R AW D ++S C+ G V LWD
Sbjct: 1970 TGGRDRSLLCWDVRTPKTPVL-IHSFPACHRDWVTGCAWT-KDNLLIS-CSSDGSVGLWD 2026
Query: 175 VRSGE-IVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGL--VKSYNMPCTIE 231
SG+ + Q L +S V++ ++ + DG T+K WD L + +++ P +
Sbjct: 2027 PESGQRLGQFLGHQSAVSAVAAVEEHVVSVSRDG-TLKVWDHQGVELTSIPAHSGPISHC 2085
Query: 232 SASLEPK 238
+A++EP+
Sbjct: 2086 AAAMEPR 2092
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 56/232 (24%), Positives = 91/232 (39%)
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFEHK-HIVRACSFSEDTHLLLTGGMEKILRIF 129
TN RAA +A+ + + D T S + AC F D L LT + +L ++
Sbjct: 1578 TNGQRAAVGTANGTVYLLDLRTWQEEKSVVSGCDGISACLFLSDDTLFLTA-FDGLLELW 1636
Query: 130 DLNRPDAPPREVDRSPGSVR-TVAWLHSDQTILSTCTDMGGVRLWDVRSGEIV-QTLETK 187
DL R + + T L D +L+T G ++LWD G++ Q K
Sbjct: 1637 DLQHGC---RVLQTKAHQYQITGCCLSPDCRLLATVCLGGCLKLWDTVRGQLAFQHTYPK 1693
Query: 188 SPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMP-CTIESASLEPKYGNKFVA 245
S + +G+ I T ++ F+ + + K P +I + + G
Sbjct: 1694 S-LNCVAFHPEGQVIATGSWAGSISFFQVDGLKVTKDLGAPGASIRTLAFNVP-GGVVAV 1751
Query: 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G D V + + G +A HHG V F G + EDG +++W
Sbjct: 1752 GRLDSMVELWAWREGARLAAFPAHHGFVAAALFLHAGCQLLTAGEDGKVQVW 1803
>UNIPROTKB|Q99973 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0000722 "telomere maintenance via
recombination" evidence=IDA] [GO:0003720 "telomerase activity"
evidence=IDA] [GO:0005697 "telomerase holoenzyme complex"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363 "nuclear matrix"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008858 InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
GO:GO:0005524 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003723
GO:GO:0016363 GO:GO:0000781 GO:GO:0000722 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0005697 CleanEx:HS_TEP1 EMBL:U86136
EMBL:BC126107 EMBL:BX640983 IPI:IPI00294519 IPI:IPI00413874
RefSeq:NP_009041.2 UniGene:Hs.508835 ProteinModelPortal:Q99973
SMR:Q99973 IntAct:Q99973 STRING:Q99973 PhosphoSite:Q99973
DMDM:215273899 PaxDb:Q99973 PRIDE:Q99973 Ensembl:ENST00000262715
GeneID:7011 KEGG:hsa:7011 UCSC:uc001vxe.3 CTD:7011
GeneCards:GC14M020833 H-InvDB:HIX0026646 HGNC:HGNC:11726
HPA:HPA029206 MIM:601686 neXtProt:NX_Q99973 PharmGKB:PA36443
HOGENOM:HOG000154545 HOVERGEN:HBG059633 InParanoid:Q99973 KO:K11127
OMA:SVPDAWK OrthoDB:EOG4001HG PhylomeDB:Q99973 ChiTaRS:TEP1
GenomeRNAi:7011 NextBio:27388 ArrayExpress:Q99973 Bgee:Q99973
Genevestigator:Q99973 GermOnline:ENSG00000129566 InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
Uniprot:Q99973
Length = 2627
Score = 190 (71.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 66/220 (30%), Positives = 101/220 (45%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRT----VAWLHS 156
H+ V CSFS D L TGG ++ L +D+ P P + P R AW
Sbjct: 2060 HEGPVSCCSFSTDGGSLATGGRDRSLLCWDVRTPKTPVL-IHSFPACHRDWVTGCAWT-K 2117
Query: 157 DQTILSTCTDMGGVRLWDVRSGE-IVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDA 215
D ++S C+ G V LWD SG+ + Q L +S V++ ++ + DG T+K WD
Sbjct: 2118 DNLLIS-CSSDGSVGLWDPESGQRLGQFLGHQSAVSAVAAVEEHVVSVSRDG-TLKVWDH 2175
Query: 216 NHFGL--VKSYNMPCTIESASLEPKY----GNKF--VAGGEDMWVRFFDFHTGNEIACNK 267
L + +++ P + +A++EP+ G++ V G D R + +
Sbjct: 2176 QGVELTSIPAHSGPISHCAAAMEPRAAGQPGSELLVVTVGLDGATRLWHPLLVCQTHTLL 2235
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDT 307
GH GPV S + SEDG++R+WQ P DDT
Sbjct: 2236 GHSGPVRAAAVSETSGLMLTASEDGSVRLWQV-PKEADDT 2274
Score = 150 (57.9 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 55/187 (29%), Positives = 86/187 (45%)
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFE----------HKHIVRACSFSEDTHLLL 118
L T+ ASAS DF+ ++W H E H+ V CSFS D L
Sbjct: 2018 LATSQELLASASEDFTVQLWPRQLLTRPHKAEDFPCGTELRGHEGPVSCCSFSTDGGSLA 2077
Query: 119 TGGMEKILRIFDLNRPDAPPREVDRSPGSVRT----VAWLHSDQTILSTCTDMGGVRLWD 174
TGG ++ L +D+ P P + P R AW D ++S C+ G V LWD
Sbjct: 2078 TGGRDRSLLCWDVRTPKTPVL-IHSFPACHRDWVTGCAWT-KDNLLIS-CSSDGSVGLWD 2134
Query: 175 VRSGE-IVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGL--VKSYNMPCTIE 231
SG+ + Q L +S V++ ++ + DG T+K WD L + +++ P +
Sbjct: 2135 PESGQRLGQFLGHQSAVSAVAAVEEHVVSVSRDG-TLKVWDHQGVELTSIPAHSGPISHC 2193
Query: 232 SASLEPK 238
+A++EP+
Sbjct: 2194 AAAMEPR 2200
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 56/232 (24%), Positives = 91/232 (39%)
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFEHK-HIVRACSFSEDTHLLLTGGMEKILRIF 129
TN RAA +A+ + + D T S + AC F D L LT + +L ++
Sbjct: 1686 TNGQRAAVGTANGTVYLLDLRTWQEEKSVVSGCDGISACLFLSDDTLFLTA-FDGLLELW 1744
Query: 130 DLNRPDAPPREVDRSPGSVR-TVAWLHSDQTILSTCTDMGGVRLWDVRSGEIV-QTLETK 187
DL R + + T L D +L+T G ++LWD G++ Q K
Sbjct: 1745 DLQHGC---RVLQTKAHQYQITGCCLSPDCRLLATVCLGGCLKLWDTVRGQLAFQHTYPK 1801
Query: 188 SPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMP-CTIESASLEPKYGNKFVA 245
S + +G+ I T ++ F+ + + K P +I + + G
Sbjct: 1802 S-LNCVAFHPEGQVIATGSWAGSISFFQVDGLKVTKDLGAPGASIRTLAFNVP-GGVVAV 1859
Query: 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G D V + + G +A HHG V F G + EDG +++W
Sbjct: 1860 GRLDSMVELWAWREGARLAAFPAHHGFVAAALFLHAGCQLLTAGEDGKVQVW 1911
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 184 (69.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 56/217 (25%), Positives = 103/217 (47%)
Query: 1 MDKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGH 60
MD+K + + HGHS PV + +SP D +L+S+S+D + L + +T + ++GH
Sbjct: 484 MDEKTSSESKILHGHSGPVYGVSFSP---DRNYLLSSSEDGTIRLWSLQTFTCLVGYKGH 540
Query: 61 KGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLT 119
VW S D A++W L F H V F +++ + T
Sbjct: 541 NYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVAT 600
Query: 120 GGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE 179
G ++ +R++D+ + R G + ++A+ + + + S TD G V LWD+ G
Sbjct: 601 GSSDRTVRLWDVLNGNCV-RIFTGHKGPIHSLAFSPNGKFLASGSTD-GRVLLWDIGHGL 658
Query: 180 IVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
++ L+ + + + + S+DG I + +TV+ WD
Sbjct: 659 MIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 177 (67.4 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 69/269 (25%), Positives = 115/269 (42%)
Query: 39 KDSSPMLRNG-ETGDWIG--TF-EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGD 94
K+S+ +R G ET I TF ++G D ++L A AD + +VW
Sbjct: 401 KESTKRIRLGPETLPSICFYTFLNAYQGLTAVDFTDDSSL-IAGGFADSTVRVW------ 453
Query: 95 VLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWL 154
S K + R + D +L+ + + RI D + + + + G V V++
Sbjct: 454 ---SVTPKKL-RKVKSAADLNLIDKESDDVLERIMD-EKTSSESKILHGHSGPVYGVSFS 508
Query: 155 HSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGSTV-KF 212
+LS+ D G +RLW +++ + + + PV + S G Y + V +
Sbjct: 509 PDRNYLLSSSED-GTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARL 567
Query: 213 WDANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHG 271
W +H+ ++ + + P N G D VR +D GN + GH G
Sbjct: 568 WATDHYQPLRIFAGHLADVTCTRFHPN-SNYVATGSSDRTVRLWDVLNGNCVRIFTGHKG 626
Query: 272 PVHCVRFSPGGESYASGSEDGTIRIWQTG 300
P+H + FSP G+ ASGS DG + +W G
Sbjct: 627 PIHSLAFSPNGKFLASGSTDGRVLLWDIG 655
Score = 153 (58.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 68/250 (27%), Positives = 104/250 (41%)
Query: 80 SADFSAKVWDALTGD---VLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR--- 133
S D ++ D T +LH H V SFS D + LL+ + +R++ L
Sbjct: 476 SDDVLERIMDEKTSSESKILHG--HSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTC 533
Query: 134 ------PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTD-MGGVRLWDVRSGEIVQTLET 186
+ P + SP V+ H D+ TD +R++ +G +
Sbjct: 534 LVGYKGHNYPVWDTQFSPFGYYFVSGGH-DRVARLWATDHYQPLRIF---AGHLAD---- 585
Query: 187 KSPVTSAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFV 244
VT + Y+ T TV+ WD + V+ + I S + P KF+
Sbjct: 586 ---VTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPN--GKFL 640
Query: 245 AGGE-DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVT 303
A G D V +D G IA KGH G ++ ++FS GE ASGS D T+R+W
Sbjct: 641 ASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAI 700
Query: 304 ND-DTETLTA 312
+D +T+ TA
Sbjct: 701 DDVETDDFTA 710
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ PV D +SP G++ +S D L + + F GH V N+
Sbjct: 539 GHNYPVWDTQFSPF---GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNS 595
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
A+ S+D + ++WD L G+ + F HK + + +FS + L +G + + ++D+
Sbjct: 596 NYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIG 655
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV-RSGEIVQT 183
E+ G++ + + + I S D VRLWDV R+ + V+T
Sbjct: 656 H-GLMIAELKGHTGTIYALKFSRDGEIIASGSID-NTVRLWDVMRAIDDVET 705
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 57/225 (25%), Positives = 96/225 (42%)
Query: 38 SKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLH 97
S D + + +T GH G V+ + S+S D + ++W T L
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 98 SFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
++ H + V FS + ++GG +++ R++ + P R V T H
Sbjct: 536 GYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQ-PLRIFAGHLADV-TCTRFHP 593
Query: 157 DQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADGST---VKF 212
+ ++T + VRLWDV +G V+ K P+ S S +G+++ A GST V
Sbjct: 594 NSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFL--ASGSTDGRVLL 651
Query: 213 WDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGE-DMWVRFFD 256
WD H GL+ + T +L+ + +A G D VR +D
Sbjct: 652 WDIGH-GLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 33/127 (25%), Positives = 60/127 (47%)
Query: 9 PL-VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSC 67
PL + GH + D+ + P+ ++ + S D + L + G+ + F GHKG + S
Sbjct: 575 PLRIFAGH---LADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSL 631
Query: 68 CLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKIL 126
N AS S D +WD G ++ + H + A FS D ++ +G ++ +
Sbjct: 632 AFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTV 691
Query: 127 RIFDLNR 133
R++D+ R
Sbjct: 692 RLWDVMR 698
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 178 (67.7 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 63/246 (25%), Positives = 114/246 (46%)
Query: 29 PDGFFLISASKDSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
P+G L SA D +L + G+ ++ T +GH GAV +T+ SAS D +
Sbjct: 77 PNGSTLASAGFDRLILLWSVYGDCDNY-ATLKGHSGAVMELHYNTDGSMLFSASTDKTVA 135
Query: 87 VWDALTGDVLHSFE-HKHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
VWD+ TG+ + + H V +C L+ TG + ++++D+ + A + ++
Sbjct: 136 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI--QTFQN 193
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI- 202
V V + + I+S D +++WD+R ++ T+ + VT +S +G Y+
Sbjct: 194 TYQVLAVTFNDTSDQIISGGID-NDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLL 252
Query: 203 TTADGSTVKFWDANHFG----LVKSY-----NMPCTIESASLEPKYGNKFVAGGEDMWVR 253
+ A +TV+ WD F VK + N + S P G+K AG D ++
Sbjct: 253 SNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD-GSKIAAGSADSFL- 310
Query: 254 FFDFHT 259
+ +H+
Sbjct: 311 -YPWHS 315
Score = 168 (64.2 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 46/164 (28%), Positives = 83/164 (50%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS V++L Y+ DG L SAS D + + + ETG+ + +GH V SC
Sbjct: 108 GHSGAVMELHYNT---DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 74 LR-AASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
+ + S D + K+WD + +F++ + V A +F++ + +++GG++ ++++DL
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL- 223
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
R + + SV ++ +LS D VR+WDVR
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMD-NTVRVWDVR 266
Score = 143 (55.4 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 43/204 (21%), Positives = 86/204 (42%)
Query: 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160
H+ V C F + L + G ++++ ++ + + G+V + + +
Sbjct: 66 HEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSML 125
Query: 161 LSTCTDMGGVRLWDVRSGEIVQTLETKSP-VTSAEVSQDGRYI--TTADGSTVKFWDANH 217
S TD V +WD +GE V+ L+ + V S ++ G + T +D TVK WD
Sbjct: 126 FSASTDKT-VAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 218 FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVR 277
++++ + + + ++ ++GG D ++ +D +GH V +
Sbjct: 185 KAAIQTFQNTYQVLAVTFNDT-SDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 278 FSPGGESYASGSEDGTIRIWQTGP 301
S G S + D T+R+W P
Sbjct: 244 LSSEGSYLLSNAMDNTVRVWDVRP 267
Score = 143 (55.4 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 61/256 (23%), Positives = 103/256 (40%)
Query: 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE---HKHIVRACSFSEDTH 115
GH+G V+ C N ASA D +W ++ GD + H V ++ D
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLW-SVYGDCDNYATLKGHSGAVMELHYNTDGS 123
Query: 116 LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175
+L + +K + ++D + R + V + ++ T +D G V+LWD+
Sbjct: 124 MLFSASTDKTVAVWDSETGERVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 176 RSGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESA- 233
R +QT + V + + I + + +K WD L +Y M +S
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL--TYTMRGHADSVT 240
Query: 234 --SLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGPVH-----CVR--FSPGGE 283
SL + G+ ++ D VR +D + C K G VH +R +SP G
Sbjct: 241 GLSLSSE-GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS 299
Query: 284 SYASGSEDGTIRIWQT 299
A+GS D + W +
Sbjct: 300 KIAAGSADSFLYPWHS 315
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 181 (68.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 64/270 (23%), Positives = 104/270 (38%)
Query: 15 HSRPVVDLFYSPITP-DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
HS + + + P D +++ D + ++ + T + T +GH V S +
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQ 276
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS D + ++W + H+ V S LL+ ++ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQ 336
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ D + G T A H D I T T +++WD++ V S P+T
Sbjct: 337 TGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPIT 396
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGED 249
S S++G Y+ TA D S+VK WD K+ + E SL ++A GG D
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 456
Query: 250 M-------WVRFFDF--HTGNEIACNKGHH 270
+ W F H+G GHH
Sbjct: 457 VQIYICKQWTEILHFTEHSGLTTGVAFGHH 486
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/223 (24%), Positives = 94/223 (42%)
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
LHS I+ DT+ +LTGG +K + +FD + + V +V +
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTK-KVTSVVFHP 274
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFW 213
S + + S D +R+W V + VQ + +S VT + G Y+ +++D F
Sbjct: 275 SQELVFSASPD-ATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFS 333
Query: 214 DANHFGL---VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
D + V C++ A P G F G D ++ +D +A GH
Sbjct: 334 DIQTGRVLTKVTDETSGCSLTCAQFHPD-GLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
GP+ + FS G A+ ++D ++++W + N T L N
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Score = 133 (51.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 46/130 (35%), Positives = 61/130 (46%)
Query: 179 EIVQTLETKSPVTSAEVSQDGRYIT---TADGSTVKFWD-ANHFGLVKSYNMPCTIESAS 234
EI+Q L+ K+ V + E + G+ + K+ A+H GL S ++P I +
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGL-HSASIP-GILALD 228
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
L P NK + GG D V FD T +A KGH V V F P E S S D TI
Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATI 288
Query: 295 RIWQTGPVTN 304
RIW P T+
Sbjct: 289 RIWSV-PNTS 297
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 181 (68.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 64/270 (23%), Positives = 104/270 (38%)
Query: 15 HSRPVVDLFYSPITP-DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
HS + + + P D +++ D + ++ + T + T +GH V S +
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQ 276
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS D + ++W + H+ V S LL+ ++ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQ 336
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ D + G T A H D I T T +++WD++ V S P+T
Sbjct: 337 TGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPIT 396
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGED 249
S S++G Y+ TA D S+VK WD K+ + E SL ++A GG D
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 456
Query: 250 M-------WVRFFDF--HTGNEIACNKGHH 270
+ W F H+G GHH
Sbjct: 457 VQIYICKQWTEILHFTEHSGLTTGVAFGHH 486
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/223 (24%), Positives = 94/223 (42%)
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
LHS I+ DT+ +LTGG +K + +FD + + V +V +
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTK-KVTSVVFHP 274
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFW 213
S + + S D +R+W V + VQ + +S VT + G Y+ +++D F
Sbjct: 275 SQELVFSASPD-ATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFS 333
Query: 214 DANHFGL---VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
D + V C++ A P G F G D ++ +D +A GH
Sbjct: 334 DIQTGRVLTKVTDETSGCSLTCAQFHPD-GLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
GP+ + FS G A+ ++D ++++W + N T L N
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Score = 133 (51.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 46/130 (35%), Positives = 61/130 (46%)
Query: 179 EIVQTLETKSPVTSAEVSQDGRYIT---TADGSTVKFWD-ANHFGLVKSYNMPCTIESAS 234
EI+Q L+ K+ V + E + G+ + K+ A+H GL S ++P I +
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGL-HSASIP-GILALD 228
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
L P NK + GG D V FD T +A KGH V V F P E S S D TI
Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATI 288
Query: 295 RIWQTGPVTN 304
RIW P T+
Sbjct: 289 RIWSV-PNTS 297
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 181 (68.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 64/270 (23%), Positives = 104/270 (38%)
Query: 15 HSRPVVDLFYSPITP-DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
HS + + + P D +++ D + ++ + T + T +GH V S +
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQ 276
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS D + ++W + H+ V S LL+ ++ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQ 336
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ D + G T A H D I T T +++WD++ V S P+T
Sbjct: 337 TGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPIT 396
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGED 249
S S++G Y+ TA D S+VK WD K+ + E SL ++A GG D
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 456
Query: 250 M-------WVRFFDF--HTGNEIACNKGHH 270
+ W F H+G GHH
Sbjct: 457 VQIYICKQWTEILHFTEHSGLTTGVAFGHH 486
Score = 166 (63.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/223 (24%), Positives = 94/223 (42%)
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
LHS I+ DT+ +LTGG +K + +FD + + V +V +
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTK-KVTSVVFHP 274
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFW 213
S + + S D +R+W V + VQ + +S VT + G Y+ +++D F
Sbjct: 275 SQELVFSASPD-ATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFS 333
Query: 214 DANHFGL---VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
D + V C++ A P G F G D ++ +D +A GH
Sbjct: 334 DIQTGRVLTKVTDETSGCSLTCAQFHPD-GLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
GP+ + FS G A+ ++D ++++W + N T L N
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Score = 133 (51.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 46/130 (35%), Positives = 61/130 (46%)
Query: 179 EIVQTLETKSPVTSAEVSQDGRYIT---TADGSTVKFWD-ANHFGLVKSYNMPCTIESAS 234
EI+Q L+ K+ V + E + G+ + K+ A+H GL S ++P I +
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGL-HSASIP-GILALD 228
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
L P NK + GG D V FD T +A KGH V V F P E S S D TI
Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQELVFSASPDATI 288
Query: 295 RIWQTGPVTN 304
RIW P T+
Sbjct: 289 RIWSV-PNTS 297
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 178 (67.7 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 73/291 (25%), Positives = 121/291 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD--TNALRAASASADFSAKV 87
DG + SA KDS + G + T GH W C + AS+S D + V
Sbjct: 1533 DGSMIASAGKDSIIHIFKASNGSELLTLVGHSN--WISCFSFSDDGKTLASSSWDNTVIV 1590
Query: 88 WDALTGDVLHSF-EHKHIVRACSFSEDTH-LLLTGGMEKILRIFDLNRPDAPPREVDRSP 145
WD + G+ +H F +H V C FS + LL++ + + IF N D RS
Sbjct: 1591 WDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIF--NTSDKNIFRNFRSA 1648
Query: 146 GS--VRTVAWLHSDQTILSTCTDMGGVRLWDV-------RSGEIVQTLETKSPVTSAEVS 196
S V + W D T++++ + G +++W+ R ++ + + S + S
Sbjct: 1649 HSKPVNSCCW-SPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFS 1707
Query: 197 QDGRYI-TTADGSTVKFWDANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRF 254
+ + I T + V +D N L+ N ++ SL GN V G +D +
Sbjct: 1708 ANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSND-GNYIVTGSDDATAKV 1766
Query: 255 FDFHTGNEIACNKGHHGP--VHCVRFSPGGESYASGSEDGTIRIWQTGPVT 303
+ G ++ N G +C+ FSP A G+ D T+R++ T
Sbjct: 1767 WSSTLGTQLT-NFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNT 1816
Score = 177 (67.4 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 72/300 (24%), Positives = 126/300 (42%)
Query: 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE-GHKGAVWSCCL-- 69
HGH+R + + +SP G + S S+D + N +T T E H + +C
Sbjct: 1825 HGHTRAITSITFSP---SGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPI-NCISFN 1880
Query: 70 DTNALRAASASADFSAKVWDALTGDVLHSFEHK-HIVRACSFSEDTHLLLTGGMEKILRI 128
TN S S D+S KVW T S E + ++ C +S D + T + + +
Sbjct: 1881 PTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAV 1940
Query: 129 FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-K 187
+ + R + V + + ++S D +R+W++++ + + L+
Sbjct: 1941 YLCSSKKLLFRLKGHTDW-VNFCTFSPDSKKLVSGGWDFN-LRVWNIKTQKELLCLKGHS 1998
Query: 188 SPVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA 245
S + A ++D +YI +A DGS VK WDA + S I + +
Sbjct: 1999 SSIEKAFFTKDQKYIISASFDGS-VKVWDAQFGSEITSLRHQTRISDVVSSSDASGRIFS 2057
Query: 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSP--GGESYASGSEDGTIRIWQTGPVT 303
+D ++ + G+ +A GH GP+ V+F+P GG +S S + PVT
Sbjct: 2058 SSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSFSSSSDAPVT 2117
Score = 177 (67.4 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 69/343 (20%), Positives = 152/343 (44%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL- 69
V HS+ V + ++ DG ++++ S D++ + + G + F G W+ CL
Sbjct: 1735 VMGNHSKSVN---HCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFL-IPGDCWANCLA 1790
Query: 70 --DTNALRAASASADFSAKVWDALTGDVLHSFE--HKHI--VRACSFSEDTHLLLTGGME 123
T L A A+ D + +++D + + H H + + +FS +L+ + +
Sbjct: 1791 FSPTQPLLAVGAT-DCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSED 1849
Query: 124 KILRIFDLNRPDAPPREVDRSPGS-VRTVAWLHSDQTILSTCTDMGGVRLWD-VRSGEIV 181
+++++++ A ++++ + +++ +++ L +C+D ++W + +
Sbjct: 1850 LLIKVWNVQTHKAE-YTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTL 1908
Query: 182 QTLETKSPVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKY 239
T + + + S DG+YI T D S + ++ L + + + P
Sbjct: 1909 STEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPD- 1967
Query: 240 GNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299
K V+GG D +R ++ T E+ C KGH + F+ + S S DG++++W
Sbjct: 1968 SKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDA 2027
Query: 300 GPVTNDDTETLTANGTIGKVKVTADEVSRKIEGFHIADEGKMK 342
+ +L I V V++ + S +I F +D+G +K
Sbjct: 2028 Q--FGSEITSLRHQTRISDV-VSSSDASGRI--FSSSDDGIIK 2065
Score = 140 (54.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 63/261 (24%), Positives = 108/261 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFEHKHIVRACSFSEDT 114
T G + +CC + ASA D ++ A G ++L H + + SFS+D
Sbjct: 1517 TITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDG 1576
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L + + + ++DL + + D S +V + + +L +C + +++
Sbjct: 1577 KTLASSSWDNTVIVWDLIVGNQIHQFKDHSR-AVNYCEFSPTANNLLMSCAWDSSIIIFN 1635
Query: 175 VRSGEIVQTLET--KSPVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTI 230
I + + PV S S DG I ++ DG T+K W N F + + I
Sbjct: 1636 TSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDG-TIKIW--NPFDTIAKDRLKHVI 1692
Query: 231 ESASLEPKYGN----KFVAGGEDMW-------VRFFDFHTGNEIACNKGHHGPV-HCVRF 278
+ ASL YG+ KF A + + V FD ++ I+ H V HC
Sbjct: 1693 D-ASLS--YGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHC-SL 1748
Query: 279 SPGGESYASGSEDGTIRIWQT 299
S G +GS+D T ++W +
Sbjct: 1749 SNDGNYIVTGSDDATAKVWSS 1769
Score = 60 (26.2 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 284 SYASGSEDGTIRIWQTGPVTNDDTETLTAN-GTIGKVKVTAD 324
S AS S+DGT+++W+ N T T +A+ G+I + + D
Sbjct: 2119 SIASSSDDGTVKLWEF----NSATATTSAHKGSINQCVFSKD 2156
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 182 (69.1 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 55/223 (24%), Positives = 95/223 (42%)
Query: 96 LHSFEHKHIVRACS-FSEDTHLLLTGGMEKILRIFDL--NRPDAPPR-EVDRSPGSVRTV 151
+++F H + C+ FS D+ ++ G E +R++ + ++ P V+ S GSVR +
Sbjct: 317 MYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLL 376
Query: 152 AWLHS----------DQTILSTCTDMGGVRLW--DVRSGEIVQTLETKSPVTSAEVSQDG 199
+ HS D L +C++ RLW D ++ + T PV G
Sbjct: 377 S--HSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHT-GPVWDVAFGPFG 433
Query: 200 RYITTAD-GSTVKFWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDF 257
Y TA T + W +H ++ + + ++ + P + G D R +D
Sbjct: 434 HYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAY-VLTGSSDKTCRLWDV 492
Query: 258 HTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300
H G+ + GH PV V +P G + AS +G I +W G
Sbjct: 493 HRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIG 535
Score = 180 (68.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 62/241 (25%), Positives = 108/241 (44%)
Query: 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL 74
HS PV +SP D +L+S S+D+S L + +T + ++GH G VW
Sbjct: 378 HSGPVYGTTFSP---DNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH 434
Query: 75 RAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR 133
A+AS D +A++W L F H V +F ++ +LTG +K R++D++R
Sbjct: 435 YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR 494
Query: 134 PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTS 192
+ R + V VA T+ S ++ G + LWD+ +G ++T+ + + S
Sbjct: 495 GHSV-RVFNGHTQPVTAVAIAPDGHTMASADSE-GLIHLWDIGTGRRIKTMRGHRGNIYS 552
Query: 193 AEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCTIE-SASLEPKYGNKFVAGGEDM 250
S++ + + TV+ WD +YN P + + S+ + K E
Sbjct: 553 LSFSRESTVLVSGGSDCTVRAWDV----FKTNYNNPVSSSLTGSVVTPFSAKTSTFNEVN 608
Query: 251 W 251
W
Sbjct: 609 W 609
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 58/230 (25%), Positives = 91/230 (39%)
Query: 35 ISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGD 94
I A K S P + E D H G V+ + S S D SA++W T
Sbjct: 353 IKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKT 412
Query: 95 VLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAW 153
L +++ H V +F H T ++ +++ + P R V V +
Sbjct: 413 ALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHI-YPLRVFAGHLSDVDCVTF 471
Query: 154 LHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGS-TVK 211
+ +L+ +D RLWDV G V+ + PVT+ ++ DG + +AD +
Sbjct: 472 HPNSAYVLTGSSDKT-CRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIH 530
Query: 212 FWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFD-FHT 259
WD +K+ I S S + V+GG D VR +D F T
Sbjct: 531 LWDIGTGRRIKTMRGHRGNIYSLSFS-RESTVLVSGGSDCTVRAWDVFKT 579
Score = 127 (49.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 49/209 (23%), Positives = 91/209 (43%)
Query: 10 LVCH-GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC 68
LV + GH+ PV D+ + P G + +AS D + L + + + F GH V
Sbjct: 414 LVAYKGHTGPVWDVAFGPF---GHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVT 470
Query: 69 LDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILR 127
N+ + S+D + ++WD G + F H V A + + D H + + E ++
Sbjct: 471 FHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIH 530
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187
++D+ + + G++ ++++ ++S +D VR WDV +T
Sbjct: 531 LWDIGT-GRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCT-VRAWDV-----FKT-NYN 582
Query: 188 SPVTSAEVSQDGRYITTADGSTVKFWDAN 216
+PV+S S G +T T F + N
Sbjct: 583 NPVSS---SLTGSVVTPFSAKTSTFNEVN 608
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 184 (69.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 48/157 (30%), Positives = 80/157 (50%)
Query: 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYI--T 203
S+ T+ + D + L T +D G +++WDVRSG + T E S VT + ++ G+ + +
Sbjct: 341 SMNTLCY-SPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVLFSS 399
Query: 204 TADGSTVKFWDANHFGLVKSYNMPCTIE--SASLEPKYGNKFVAGGEDMW-VRFFDFHTG 260
+ DG T++ WD F K++ ++ +++P G V G +D + + + TG
Sbjct: 400 SLDG-TIRAWDLIRFRNFKTFTATSRVQFNCLAVDPS-GEVIVGGSQDTFEIYVWSVQTG 457
Query: 261 NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH GP+ C+ F AS S D TIRIW
Sbjct: 458 QLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIW 494
Score = 124 (48.7 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 40/181 (22%), Positives = 81/181 (44%)
Query: 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHL 116
+GH ++ + C + R + S D K+WD +G L +F EH V F++ +
Sbjct: 336 QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQV 395
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + ++ +R +DL R S +A S + I+ D + +W V+
Sbjct: 396 LFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAVDPSGEVIVGGSQDTFEIYVWSVQ 455
Query: 177 SGEIVQTLET-KSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESAS 234
+G+++ +L + P++ ++ + +A T++ W N F ++ P I+S +
Sbjct: 456 TGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIW--NIFSRNQTVE-PIEIQSDA 512
Query: 235 L 235
L
Sbjct: 513 L 513
Score = 39 (18.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 273 VHCVRFSPGGESYASGSEDGTI 294
V V FSP ++A+ S +G +
Sbjct: 676 VTAVEFSPTTAAFAAASTEGLL 697
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 184 (69.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 48/157 (30%), Positives = 80/157 (50%)
Query: 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYI--T 203
S+ T+ + D + L T +D G +++WDVRSG + T E S VT + ++ G+ + +
Sbjct: 341 SMNTLCY-SPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVLFSS 399
Query: 204 TADGSTVKFWDANHFGLVKSYNMPCTIE--SASLEPKYGNKFVAGGEDMW-VRFFDFHTG 260
+ DG T++ WD F K++ ++ +++P G V G +D + + + TG
Sbjct: 400 SLDG-TIRAWDLIRFRNFKTFTATSRVQFNCLAVDPS-GEVIVGGSQDTFEIYVWSVQTG 457
Query: 261 NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ GH GP+ C+ F AS S D TIRIW
Sbjct: 458 QLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIW 494
Score = 124 (48.7 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 40/181 (22%), Positives = 81/181 (44%)
Query: 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHL 116
+GH ++ + C + R + S D K+WD +G L +F EH V F++ +
Sbjct: 336 QGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQV 395
Query: 117 LLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR 176
L + ++ +R +DL R S +A S + I+ D + +W V+
Sbjct: 396 LFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAVDPSGEVIVGGSQDTFEIYVWSVQ 455
Query: 177 SGEIVQTLET-KSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPCTIESAS 234
+G+++ +L + P++ ++ + +A T++ W N F ++ P I+S +
Sbjct: 456 TGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIW--NIFSRNQTVE-PIEIQSDA 512
Query: 235 L 235
L
Sbjct: 513 L 513
Score = 39 (18.8 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 273 VHCVRFSPGGESYASGSEDGTI 294
V V FSP ++A+ S +G +
Sbjct: 676 VTAVEFSPTTAAFAAASTEGLL 697
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 182 (69.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 49/201 (24%), Positives = 90/201 (44%)
Query: 101 HKHIVRACSFSEDT-HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQT 159
H V + + T LL TGG + + ++ +N+P+ + + ++ + + +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTT-PIESLQ-ISAKEE 76
Query: 160 ILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYITTADGST-VKFWDANH 217
++ + G +R+WD+ + +I++TL K+ + S + G ++ + T +K WD
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRR 136
Query: 218 FGLVKSYNMPC-TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCV 276
G + Y + P G + +D V+ +D G + GH GPV+ V
Sbjct: 137 KGCIFKYKSHTQAVRCLRFSPD-GKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVV 195
Query: 277 RFSPGGESYASGSEDGTIRIW 297
F P ASGS D TIR W
Sbjct: 196 EFHPSEYLLASGSSDRTIRFW 216
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 46/190 (24%), Positives = 82/190 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ P+ L I+ +++ S+ S + + E + T GHK + C LD +
Sbjct: 61 GHTTPIESL---QISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANI--CSLDFHP 115
Query: 74 LRA--ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
+ AS S D K+WD + ++ H VR FS D L + + ++++D
Sbjct: 116 YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-P 189
L S G V V + H + +L++ + +R WD+ +V +E ++ P
Sbjct: 176 LTAGKVMFEFTGHS-GPVNVVEF-HPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATP 233
Query: 190 VTSAEVSQDG 199
V + DG
Sbjct: 234 VRCILFNPDG 243
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 175 (66.7 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 71/280 (25%), Positives = 125/280 (44%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC--LDTNALRAASASADFSAKV 87
DG + ++ D + L N G + T+ GH V D ++L S D + +
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSL--CSGGGDKAVVL 93
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDL-NRPDAPPREVDRSP 145
WD +G V+ F H V F+E+ ++L+G ++ +R +D +R P + +D +
Sbjct: 94 WDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKPEPVQTLDEAR 153
Query: 146 GSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGR--YIT 203
+ +V SD +L+ D G VR +D+R G++ SP+T S+DG+ ++
Sbjct: 154 DGISSVKV--SDHEVLAGSVD-GRVRRYDLRMGQLFSDY-VGSPITCICFSRDGQCTLVS 209
Query: 204 TADGSTVKFWDANHFGLVKSY----NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
+ D ST++ D + L+ Y N ++ E V+ ED V F+D
Sbjct: 210 SLD-STLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERD--THVVSCSEDGKVFFWDLVE 266
Query: 260 GN-EIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
G +A G G V + + P E + G+I+ W+
Sbjct: 267 GALALALPVGP-GVVQSLTYHPT-EPCLLTAMGGSIQCWR 304
Score = 153 (58.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 67/250 (26%), Positives = 104/250 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDT 114
T + +GAV + + + + +D + K+W+ L G +L ++ H + V + S D
Sbjct: 20 TLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDN 79
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174
L +GG +K + ++D+ R+ G V TV + ILS D +R WD
Sbjct: 80 SSLCSGGGDKAVVLWDVASGQVV-RKFRGHAGKVNTVQFNEEATVILSGSID-STIRCWD 137
Query: 175 VRSG--EIVQTL-ETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSY-NMPCTI 230
RS E VQTL E + ++S +VS + DG V+ +D L Y P T
Sbjct: 138 CRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGR-VRRYDLRMGQLFSDYVGSPITC 196
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVH---CVRFSPGGESYAS 287
S + G + D +R D TG + GH + C S S
Sbjct: 197 ICFSRD---GQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCC-LSERDTHVVS 252
Query: 288 GSEDGTIRIW 297
SEDG + W
Sbjct: 253 CSEDGKVFFW 262
Score = 134 (52.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 44/157 (28%), Positives = 73/157 (46%)
Query: 181 VQTLET-KSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK 238
++TL+ + V + + DG Y +T T+K W+ L+++Y+ E
Sbjct: 18 LKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH-GYEVLDAAGS 76
Query: 239 YGNKFV-AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+ N + +GG D V +D +G + +GH G V+ V+F+ SGS D TIR W
Sbjct: 77 FDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCW 136
Query: 298 QTGPVTNDDTETLT-ANGTIGKVKVTADEV-SRKIEG 332
+ +TL A I VKV+ EV + ++G
Sbjct: 137 DCRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDG 173
Score = 122 (48.0 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 51/207 (24%), Positives = 87/207 (42%)
Query: 105 VRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC 164
VRA F+ D + LT G +K L++++ R R V A + ++ S
Sbjct: 28 VRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLL-RTYSGHGYEVLDAAGSFDNSSLCSGG 86
Query: 165 TDMGGVRLWDVRSGEIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVK 222
D V LWDV SG++V+ + V + + +++ I + ST++ WD
Sbjct: 87 GDKAVV-LWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKPEP 145
Query: 223 SYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGG 282
+ + S ++ +AG D VR +D G + G P+ C+ FS G
Sbjct: 146 VQTLDEARDGISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVG--SPITCICFSRDG 203
Query: 283 ESYASGSEDGTIRIWQ--TGPVTNDDT 307
+ S D T+R+ TG + + T
Sbjct: 204 QCTLVSSLDSTLRLLDKDTGELLGEYT 230
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 139 (54.0 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 44/166 (26%), Positives = 76/166 (45%)
Query: 27 ITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
++PD L SA + + ET I +++GH+G V + A+A AD
Sbjct: 68 LSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVL 127
Query: 87 VWDALTGDVLHSFE-HKHIVRACSFSEDTH--LLLTGGMEKILRIFDLNRPDAPPR---E 140
VWD G H F HK +V + F D++ +L++G + +R++DLN + +
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAI 187
Query: 141 VDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET 186
+++ +V ++A T+ S D V LWD+ T+ T
Sbjct: 188 MEKHFSAVTSIALSEDGLTLFSAGRDKV-VNLWDLHDYSCKATVAT 232
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 57/267 (21%), Positives = 111/267 (41%)
Query: 59 GHKGAVWS---CCLDTNALRAASASADFSAKVWDALTGDVLH-SFEHKHIVRACSFSEDT 114
GHK V S C + + + S D + ++W+A + + H + A +F++ +
Sbjct: 399 GHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKS 458
Query: 115 H-LLLTGGMEKILRIFDLNR----PDAPPREVDRS-----PGSVRTVAWLHSDQTILSTC 164
++G ++ L+++ L+ + P RS + +VA +D + +
Sbjct: 459 FSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGS 518
Query: 165 TDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADGS-TVKFWDANHFGLVK 222
D +W + V TL+ K + S E S + + TA G TVK W + +K
Sbjct: 519 EDRTA-SIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLK 577
Query: 223 SYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPG 281
++ ++ AS G +FV+ G D ++ ++ +T IA H V +
Sbjct: 578 TFEGHTSSVLRASFITD-GTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKK 636
Query: 282 GESYASGSEDGTIRIWQTGPVTNDDTE 308
E A+G D I +W ++ + +
Sbjct: 637 TEMIATGGGDAVINLWHDSTASDKEDD 663
Score = 124 (48.7 bits), Expect = 0.00020, P = 0.00020
Identities = 62/279 (22%), Positives = 109/279 (39%)
Query: 2 DKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK 61
D ++ V GH V+ L + +++ SKD + L N + IG GH
Sbjct: 387 DVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHN 446
Query: 62 GAVWSCCLDTNALRA-ASASADFSAKVW--DALTGDVLHSFE---------HKHIVRACS 109
G + + + S S D + KVW D ++ D H + + +
Sbjct: 447 GDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVA 506
Query: 110 FSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVR---TVAWLHSDQTILSTCTD 166
+ + L+ TG ++ I+ L PD V G R +V + DQ +++ D
Sbjct: 507 VARNDSLVCTGSEDRTASIWRL--PDLV--HVVTLKGHKRRIFSVEFSTVDQCVMTASGD 562
Query: 167 MGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDG-RYITT-ADGSTVKFWDANHFGLVKS 223
V++W + G ++T E S V A DG ++++ ADG +K W+ N + +
Sbjct: 563 KT-VKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADG-LLKLWNVNTSECIAT 620
Query: 224 YNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE 262
Y+ A K GG D + + T ++
Sbjct: 621 YDQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASD 659
Score = 92 (37.4 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 240 GNKF-VAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESY-ASGSEDGTIRIW 297
GN V G +D VR ++ + + I GH+G + V F+ S+ SGS D T+++W
Sbjct: 415 GNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVW 474
Query: 298 QTGPVTNDDTETL 310
++ D E +
Sbjct: 475 SLDGISEDSEEPI 487
Score = 83 (34.3 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 37/145 (25%), Positives = 58/145 (40%)
Query: 77 ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
A A D + D+ V + E + A + S D LL + G + +R++DL
Sbjct: 35 ACACGDV-INIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLK 93
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEV 195
R G V +A H+ +L+T V +WDV G V S+ +
Sbjct: 94 CI-RSWKGHEGPVMGMA-CHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSIL 151
Query: 196 ----SQDGRYITTADGSTVKFWDAN 216
S I+ +D +TV+ WD N
Sbjct: 152 FHPDSNKNILISGSDDATVRVWDLN 176
Score = 82 (33.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 57/232 (24%), Positives = 87/232 (37%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL--DT 71
GH PV+ + G L +A D ++ + + G F GHKG V S D+
Sbjct: 100 GHEGPVMGM---ACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDS 156
Query: 72 NALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDTHLLLTGGMEKILRIFD 130
N S S D + +VWD + E K + + FS T + L+ E L +F
Sbjct: 157 NKNILISGSDDATVRVWDLNAKNT----EKKCLAIMEKHFSAVTSIALS---EDGLTLFS 209
Query: 131 LNRPDAPPREVDRSPGSVR-TVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP 189
R D D S + TVA + + + + T G V +L+ K
Sbjct: 210 AGR-DKVVNLWDLHDYSCKATVA---TYEVLEAVTTVSSGTPF-----ASFVASLDQKKS 260
Query: 190 VTSAEVSQDGRYITTADGSTVKFWDAN-HFGLVKSYNMPCTIESASLEPKYG 240
SQ +IT + V+ W + L + + T+ S E K G
Sbjct: 261 KKKESDSQATYFITVGERGVVRIWKSEGSICLYEQKSSDITVSSDDEESKRG 312
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 185 (70.2 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 76/312 (24%), Positives = 128/312 (41%)
Query: 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL 69
LV H H V +Y+ + DG + S + + +G+ + + H+ V C
Sbjct: 612 LVMHPHQGAV---YYACFSKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAF 668
Query: 70 DTNALRAASASADFSAKVWDALTGDVLHSFE--HKHIVRACSFSEDTH--LLLTGGMEKI 125
+ A+ ++D K+W+ G ++ FE H+ + C F+ LL T +K
Sbjct: 669 SPDDRHIATCASDKKVKLWNVERGVLIREFEVEHEEQINHCQFTNTGRRVLLATCSNDKF 728
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTV--AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT 183
L P+ + + G + V + L+T + G ++L++V S ++
Sbjct: 729 TNT-KLWNPNKKTSQ-NTMFGHMEPVNHCCFSPNDLYLATSSSDGSLKLFEVSSANEWKS 786
Query: 184 LETKS--PVTSAEV---------SQDGRYITTADGSTVKFWDANHFGLVKSYNMP--CTI 230
++ S P + E+ S DG I A +TV +D L+ TI
Sbjct: 787 IDVDSFFPESDEEIKAMVKCSTWSADGSQIICAARNTVFVFDVETSDLLLELKTSRLSTI 846
Query: 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE 290
+ P VA V ++F + + A GH VHCV+FSP G S S+
Sbjct: 847 QFCHACPNSSLLAVALSH-YTVELWNFESSKKKAECSGHLSWVHCVQFSPDGSLLLSSSD 905
Query: 291 DGTIRIWQTGPV 302
D TIR+W+T V
Sbjct: 906 DQTIRLWETDRV 917
Score = 141 (54.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 63/211 (29%), Positives = 90/211 (42%)
Query: 10 LVCHGHSRPV--VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSC 67
+V GH PV L S +P L S S D + + + G + H+GAV SC
Sbjct: 1045 MVLQGHMEPVRKFHLLSSSSSPR---LFSWSFDGTVKVWDLTRGQMLQDLVCHEGAVLSC 1101
Query: 68 CLDTNALRAASASADFSAK-VWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTG---GM 122
+ ++ A+ SA+ +AK VW + + ++ E HK VR+C FS D L TG G
Sbjct: 1102 DVSSDGRLFATTSANRTAKKVWSSASWKMIFLLEGHKDCVRSCRFSWDNKRLATGDDNGE 1161
Query: 123 EKILRIFDLNRPDAPPREVDRSPGSVRTVAW---LH--SDQTILSTCTDMGG-VRLWDVR 176
++ + D R+ S S W LH D +L GG ++ W V
Sbjct: 1162 IRLWSMLDGALLKICSRDTKDSMDSYHG-GWVTDLHFSPDNRVL---VSTGGYIKWWSVE 1217
Query: 177 SGEIVQTLETKSP-VTSAEVSQDGRYITTAD 206
SGE +QT T + VS D T D
Sbjct: 1218 SGEALQTFYTMGGNLKKIHVSPDFSTFITVD 1248
>ASPGD|ASPL0000054401 [details] [associations]
symbol:AN0305 species:162425 "Emericella nidulans"
[GO:0034388 "Pwp2p-containing subcomplex of 90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030515 "snoRNA binding"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676
GO:GO:0030529 EMBL:AACD01000006 InterPro:IPR007148 Pfam:PF04003
HOGENOM:HOG000212524 KO:K14556 OMA:SIFAHDD OrthoDB:EOG4N07P3
RefSeq:XP_657909.1 ProteinModelPortal:Q5BGM5 STRING:Q5BGM5
EnsemblFungi:CADANIAT00002409 GeneID:2876084 KEGG:ani:AN0305.2
Uniprot:Q5BGM5
Length = 963
Score = 124 (48.7 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 187 KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA- 245
++ + S +S D R + +A ++K W+ +++ + SA L P G+K V
Sbjct: 425 RTDIRSVALSSDDRMLASASNGSLKVWNVRTQNCLRTLECGYALCSAFL-P--GDKIVVV 481
Query: 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G +D + FD + + K H GPV ++ P G+S SGS D + + W
Sbjct: 482 GNKDGELEIFDIASSTLLDTIKAHDGPVWSLQVHPDGKSLVSGSADKSAKFW 533
Score = 111 (44.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 31/118 (26%), Positives = 53/118 (44%)
Query: 187 KSPVTSAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNM-PCTIESASLEPKY----G 240
K PV + ++S D + I T TV+ W + KS+ +I + + P G
Sbjct: 605 KLPVLNMDISWDSKLIVTCSADKTVRLWGLDFGDCHKSFLAHEDSIMAVAFVPSNNEGNG 664
Query: 241 NKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
+ F + +D ++++D I GHHG + + S GE + S D +IR W+
Sbjct: 665 HNFFSVSKDRVIKYWDGDKFEHIQKLSGHHGEIWAMAISHTGEFIVTASHDKSIRTWE 722
Score = 109 (43.4 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 40/185 (21%), Positives = 78/185 (42%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
T + F + +D S L + T + +F GHK A+ D +R AS S D + +
Sbjct: 83 TDEDIFAVGY-EDGSIRLWDSRTETVMISFNGHKSAITQLAFDNAGVRLASGSRDTNIIL 141
Query: 88 WDALT--G--------DVLHSFEHK----HIVRACSFSEDTHLLLTGGMEKILRIFDLNR 133
WD ++ G D + S ++ SE L+T G + +++++DL
Sbjct: 142 WDLISEVGLFKLRGHTDQITSLHFLVPTLELLNEAGLSEHAGFLITTGKDALIKVWDLAS 201
Query: 134 PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSA 193
+ +S G ++ L DQ+ T + G ++ W + G +++ + K+ +
Sbjct: 202 QHCIETHIAQSNGECWSLG-LAPDQSGCITGGNDGELKAWSIDEGAMIEISKEKTGSENR 260
Query: 194 EVSQD 198
+ D
Sbjct: 261 RILAD 265
>UNIPROTKB|P73594 [details] [associations]
symbol:slr1409 "Uncharacterized WD repeat-containing
protein slr1409" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S77304 RefSeq:NP_440958.1
RefSeq:YP_005651017.1 ProteinModelPortal:P73594 STRING:P73594
GeneID:12255183 GeneID:954268 KEGG:syn:slr1409 KEGG:syy:SYNGTS_1064
PATRIC:23839190 OMA:CCNFSPQ ProtClustDB:CLSK501008 Uniprot:P73594
Length = 326
Score = 175 (66.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 68/276 (24%), Positives = 129/276 (46%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87
+PDG FL++A+ D L E G+ +G +G K +++ L + + D + ++
Sbjct: 58 SPDGQFLLTAAADGVGTLWTKE-GEMLGQLQGQKPPMFNARLSPDRQILITTGYDGTIRL 116
Query: 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG 146
W+ L G++L + H+ V FS D+ +++T + +IF R V +S G
Sbjct: 117 WN-LQGELLEEQQPHRAAVADAIFSPDSQIIVTCSDDGQTKIF--TRQGQEIASVLKS-G 172
Query: 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTA 205
+ R +A+ H ++++ +D G + L + +G+I + + T + + + S +G + T+
Sbjct: 173 TARNLAY-HPQGLLIASVSDSGSLHLINP-NGKIEREISTGQGRINNVNFSPNGEQLLTS 230
Query: 206 D-GSTVKFWDANHFG-LVKSYNMPCT--IESASLEPKYGNKFVAGGEDMWVRFFDFHTGN 261
+ K W N G L+ Y + T + SA PK G +D +RF+ G
Sbjct: 231 GINGSAKLW--NLAGELIHEYKVVPTGWVNSAQFYPK-GEWLATASDDGTIRFWQ-KDGQ 286
Query: 262 EIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
I + + + FSP G+ A+ S G ++W
Sbjct: 287 LIYELPLVNARLTSLSFSPDGKQLAATSSQG--QVW 320
Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
Identities = 53/225 (23%), Positives = 99/225 (44%)
Query: 78 SASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA 136
+A+AD +W G++L + K + S D +L+T G + +R+++L
Sbjct: 66 TAAADGVGTLWTK-EGEMLGQLQGQKPPMFNARLSPDRQILITTGYDGTIRLWNLQGELL 124
Query: 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVS 196
++ R+ +V A D I+ TC+D G +++ + EI L++ + A
Sbjct: 125 EEQQPHRA--AVAD-AIFSPDSQIIVTCSDDGQTKIFTRQGQEIASVLKSGTARNLAYHP 181
Query: 197 QDGRYITTADGSTVKFWDANHFGLVKSY--NMPCTIESASLEPKYGNKFVAGGEDMWVRF 254
Q + +D ++ + N G ++ I + + P G + + G + +
Sbjct: 182 QGLLIASVSDSGSLHLINPN--GKIEREISTGQGRINNVNFSPN-GEQLLTSGINGSAKL 238
Query: 255 FDFHTGNEIACNKG-HHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
++ G I K G V+ +F P GE A+ S+DGTIR WQ
Sbjct: 239 WNL-AGELIHEYKVVPTGWVNSAQFYPKGEWLATASDDGTIRFWQ 282
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 182 (69.1 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 57/215 (26%), Positives = 105/215 (48%)
Query: 14 GHSRPVVDLFYSPITPDGF--FLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCL-- 69
GH+ V + P+ +G+ FL S+S+D + L+ G + + AVW+
Sbjct: 408 GHTASVTAVALGPLDVNGYPTFLASSSQDRT--LKRFNLGSQLNKSDFSNRAVWTIKAHD 465
Query: 70 -DTNALRA-------ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTG 120
D NA++ ASAS D + K+WD+ TG+V+ H+ V ACSF+ + L +G
Sbjct: 466 RDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASG 525
Query: 121 GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI 180
++ +RI++++ + ++ G++ + ++ ++S D G V++W + SGE
Sbjct: 526 SGDRTIRIWNVDTQQCV-QTLEGHTGAILKLIYISQGTQVVSAAAD-GLVKVWSLSSGEC 583
Query: 181 VQTLETKSPVTSAEVSQ-DGRYITTADG-STVKFW 213
V TL+ A S+ DG + + + V W
Sbjct: 584 VATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/131 (25%), Positives = 66/131 (50%)
Query: 172 LWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT--ADGSTVKFWDANHFGLVKSYNMPC 228
++++ SG +++++ ++PV + + + T A+G VK WD + S+
Sbjct: 87 IYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEG-LVKVWDIAGAYVTHSFRGHG 145
Query: 229 TIESASLEPKYGNKFV--AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYA 286
+ SA K+ N +V +G +D VR +D ++ +A +GH + + F P G
Sbjct: 146 GVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLL 205
Query: 287 SGSEDGTIRIW 297
SGS D T+++W
Sbjct: 206 SGSRDKTVQVW 216
Score = 131 (51.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 40/171 (23%), Positives = 79/171 (46%)
Query: 27 ITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86
++ DG + SAS+D + L + TG+ +G GH+ VW+C + + + AS S D + +
Sbjct: 473 VSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIR 532
Query: 87 VWDALTGDVLHSFE-HKH-IVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
+W+ T + + E H I++ S+ T ++ + + +++++ L+ + +D
Sbjct: 533 IWNVDTQQCVQTLEGHTGAILKLIYISQGTQVV-SAAADGLVKVWSLSSGECVAT-LDNH 590
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLW-DVRSGEIVQTLETKSPVTSAE 194
V +A ++S D V +W DV I + E AE
Sbjct: 591 EDRVWALASRFDGSLLVSGGAD-AVVSVWKDVTEEYIAKQAEELERRVEAE 640
Score = 125 (49.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 51/197 (25%), Positives = 91/197 (46%)
Query: 27 ITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD-TNALRAASASADFSA 85
IT D LI+A + + +G I + + H+ V + +D TN L A+ A+
Sbjct: 69 ITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTL-LATGGAEGLV 127
Query: 86 KVWDALTGDVLHSFE-HKHIVRACSFS--EDTHLLLTGGMEKILRIFDLNRPDAPPREVD 142
KVWD V HSF H ++ A F ++T +L +G + +R++DLN + V
Sbjct: 128 KVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLN--SSRSMAVF 185
Query: 143 RSPGSV-RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTS---AEVSQD 198
SV R + + + +LS D V++W+++ V+T+ V + +
Sbjct: 186 EGHSSVIRGLTFEPTGSFLLSGSRDKT-VQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPE 244
Query: 199 GRYITTA-DGSTVKFWD 214
+ + TA +G+ + WD
Sbjct: 245 EKILYTAGEGNLILAWD 261
Score = 103 (41.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 27/83 (32%), Positives = 38/83 (45%)
Query: 238 KYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
K G + +D ++ +D TG + +GH V F+P ASGS D TIRIW
Sbjct: 475 KDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIW 534
Query: 298 QTGPVTNDDTETLTAN-GTIGKV 319
T +TL + G I K+
Sbjct: 535 NVD--TQQCVQTLEGHTGAILKL 555
Score = 103 (41.3 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 49/218 (22%), Positives = 90/218 (41%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGT---FEGHKGAVWSC 67
V GHS + L + P G FL+S S+D + + N + + T F + W
Sbjct: 184 VFEGHSSVIRGLTFEPT---GSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVN 240
Query: 68 CLDTNALRAASASADFSAKVWDALTG-------DVLHSFEHKHIVRACSFSEDTHLLLTG 120
+ + + WD +G D HS E I++ FSE+T L +
Sbjct: 241 GQPEEKILYTAGEGNLIL-AWDWKSGSRLDPGVDTTHS-ETNAIIQVVPFSENTLLSVHS 298
Query: 121 GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI 180
+ +LR ++++ S V AW+ D L+ C++ + + ++
Sbjct: 299 DLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDH--LAVCSNTEFIDVISTDGTQV 356
Query: 181 VQTLETKSPVT-SAEVSQDGRYITT-ADGSTVKFWDAN 216
LE + + + + S+DG ++ T A +TV+ W+ N
Sbjct: 357 FGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLN 394
Score = 67 (28.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 267 KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ--TGPV 302
K H V+ ++ S G AS S+D TI++W TG V
Sbjct: 462 KAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEV 499
Score = 60 (26.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 47/192 (24%), Positives = 80/192 (41%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGA---VWSCCLDTNALRAASASADFSAKVWDA 90
L+S D S +LR G+ T + G+ V C + A ++ +F +
Sbjct: 293 LLSVHSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTD 352
Query: 91 LTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG--- 146
T V E H IV SED L TG + +R+++LN D + + G
Sbjct: 353 GT-QVFGVLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTA 411
Query: 147 SVRTVAW----LHSDQTILSTCTDMGGVRLWDVRS--------GEIVQTLETKS-PVTSA 193
SV VA ++ T L++ + ++ +++ S V T++ V +
Sbjct: 412 SVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAI 471
Query: 194 EVSQDGRYITTA 205
+VS+DGR I +A
Sbjct: 472 QVSKDGRIIASA 483
Score = 53 (23.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 267 KGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
+GH V + S G A+G++D T+R+W
Sbjct: 361 EGHTDIVLTLDSSEDGVWLATGAKDNTVRLW 391
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 176 (67.0 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 63/255 (24%), Positives = 104/255 (40%)
Query: 58 EGHKGAVWSCCLD--TNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
+GH G V C+D + S+S D VWD T + H+ V AC+FS +
Sbjct: 65 KGHVGKV--LCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSS 122
Query: 115 HLLLTGGMEKILRIFDLNRPD---APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171
++ GG++ + L+ D R+V + +L SD IL+ D
Sbjct: 123 QMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGD-STCA 181
Query: 172 LWDVRSGEIVQTLETKS-PVTSAEVSQ-D--GRYITTADGSTVKFWDANHFGLVKSYN-M 226
+WDV SG+++Q + V + +V + D +I+ WD V+S+
Sbjct: 182 IWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQCVQSFEGH 241
Query: 227 PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH--GPVHCVRFSPGGES 284
I + P G+ F G +D R FD ++ + PV+ V FS G
Sbjct: 242 EADINTVRFHPN-GDAFATGSDDATCRLFDLRADRQVCVYEKESILFPVNGVDFSLSGRI 300
Query: 285 YASGSEDGTIRIWQT 299
+G D + +W +
Sbjct: 301 LFAGYGDYRVGVWDS 315
Score = 172 (65.6 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 70/304 (23%), Positives = 126/304 (41%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
+ GH V+ + +S D ++S+S+D ++ +G T + V +C
Sbjct: 63 ILKGHVGKVLCMDWSL---DKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFS 119
Query: 71 TNALRAASASADFSAKVWD-ALTGDVLHSFE----HKHIVRACSFSEDTHLLLTGGMEKI 125
++ A D V + D++ H + C+F +L+LTG +
Sbjct: 120 PSSQMIACGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDST 179
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTVAWLHSD--QTILSTCTDMGGVRLWDVRSGEIVQT 183
I+D+ + G V + D T +S D + +WD+RSG+ VQ+
Sbjct: 180 CAIWDVESGQLI-QNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSL-VWDIRSGQCVQS 237
Query: 184 LET-KSPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLVKSYNMPCTIESAS-LEPKYG 240
E ++ + + +G + T +D +T + +D +++ C E S L P G
Sbjct: 238 FEGHEADINTVRFHPNGDAFATGSDDATCRLFD------LRADRQVCVYEKESILFPVNG 291
Query: 241 NKFVAGGEDMWVRFFDFHTG--NEIACNK-----GHHGPVHCVRFSPGGESYASGSEDGT 293
F G ++ + D+ G + + C + GH + C+R SP G + S S D T
Sbjct: 292 VDFSLSGRILFAGYGDYRVGVWDSLKCARHSVLYGHENRISCLRTSPDGTAVCSASWDCT 351
Query: 294 IRIW 297
IRIW
Sbjct: 352 IRIW 355
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 179 (68.1 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 63/270 (23%), Positives = 104/270 (38%)
Query: 15 HSRPVVDLFYSPITP-DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
HS + + + P D +++ D + ++ + + + T +GH V S +
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ 276
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS D + ++W + H+ V S LL+ ++ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQ 336
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ D + G T A H D I T T +++WD++ V S P+T
Sbjct: 337 TGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPIT 396
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGED 249
S S++G Y+ TA D S+VK WD K+ + E SL ++A GG D
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 456
Query: 250 M-------WVRFFDF--HTGNEIACNKGHH 270
+ W F H+G GHH
Sbjct: 457 VQIYICKQWTEILHFTEHSGLTTGVAFGHH 486
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 55/223 (24%), Positives = 94/223 (42%)
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
LHS I+ DT+ +LTGG +K + +FD + + V +V +
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTK-KVTSVVFHP 274
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFW 213
S + + S D +R+W V + VQ + +S VT + G Y+ +++D F
Sbjct: 275 SQELVFSASPD-ATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFS 333
Query: 214 DANHFGL---VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
D + V C++ A P G F G D ++ +D +A GH
Sbjct: 334 DIQTGRVLTKVTDETSGCSLTCAQFHPD-GLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
GP+ + FS G A+ ++D ++++W + N T L N
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 43/123 (34%), Positives = 58/123 (47%)
Query: 179 EIVQTLETKSPVTSAEVSQDGRYIT---TADGSTVKFWD-ANHFGLVKSYNMPCTIESAS 234
EI+Q L+ K+ V + E + G+ + K+ A+H GL S ++P I +
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGL-HSASIP-GILALD 228
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
L P NK + GG D V FD + +A KGH V V F P E S S D TI
Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATI 288
Query: 295 RIW 297
RIW
Sbjct: 289 RIW 291
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 179 (68.1 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 63/270 (23%), Positives = 104/270 (38%)
Query: 15 HSRPVVDLFYSPITP-DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
HS + + + P D +++ D + ++ + + + T +GH V S +
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ 276
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS D + ++W + H+ V S LL+ ++ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQ 336
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ D + G T A H D I T T +++WD++ V S P+T
Sbjct: 337 TGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPIT 396
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGED 249
S S++G Y+ TA D S+VK WD K+ + E SL ++A GG D
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 456
Query: 250 M-------WVRFFDF--HTGNEIACNKGHH 270
+ W F H+G GHH
Sbjct: 457 VQIYICKQWTEILHFTEHSGVTTGVAFGHH 486
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 55/223 (24%), Positives = 94/223 (42%)
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
LHS I+ DT+ +LTGG +K + +FD + + V +V +
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTK-KVTSVVFHP 274
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFW 213
S + + S D +R+W V + VQ + +S VT + G Y+ +++D F
Sbjct: 275 SQELVFSASPD-ATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFS 333
Query: 214 DANHFGL---VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
D + V C++ A P G F G D ++ +D +A GH
Sbjct: 334 DIQTGRVLTKVTDETSGCSLTCAQFHPD-GLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
GP+ + FS G A+ ++D ++++W + N T L N
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Score = 128 (50.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 43/123 (34%), Positives = 58/123 (47%)
Query: 179 EIVQTLETKSPVTSAEVSQDGRYIT---TADGSTVKFWD-ANHFGLVKSYNMPCTIESAS 234
EI+Q L+ K+ V + E + G+ + K+ A+H GL S ++P I +
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGL-HSASIP-GILALD 228
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
L P NK + GG D V FD + +A KGH V V F P E S S D TI
Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATI 288
Query: 295 RIW 297
RIW
Sbjct: 289 RIW 291
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 179 (68.1 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 63/270 (23%), Positives = 104/270 (38%)
Query: 15 HSRPVVDLFYSPITP-DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
HS + + + P D +++ D + ++ + + + T +GH V S +
Sbjct: 226 HSASIPGILALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ 285
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS D + ++W + H+ V S LL+ ++ D+
Sbjct: 286 ELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQ 345
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ D + G T A H D I T T +++WD++ V S P+T
Sbjct: 346 TGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPIT 405
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGED 249
S S++G Y+ TA D S+VK WD K+ + E SL ++A GG D
Sbjct: 406 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 465
Query: 250 M-------WVRFFDF--HTGNEIACNKGHH 270
+ W F H+G GHH
Sbjct: 466 VQIYICKQWTEILHFTEHSGLTTGVAFGHH 495
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 55/223 (24%), Positives = 94/223 (42%)
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
LHS I+ DT+ +LTGG +K + +FD + + V +V +
Sbjct: 225 LHSASIPGILALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTK-KVTSVVFHP 283
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFW 213
S + + S D +R+W V + VQ + +S VT + G Y+ +++D F
Sbjct: 284 SQELVFSASPD-ATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFS 342
Query: 214 DANHFGL---VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
D + V C++ A P G F G D ++ +D +A GH
Sbjct: 343 DIQTGRVLTKVTDETSGCSLTCAQFHPD-GLIFGTGTMDSQIKIWDLKERTNVANFPGHS 401
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
GP+ + FS G A+ ++D ++++W + N T L N
Sbjct: 402 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 444
Score = 127 (49.8 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 43/123 (34%), Positives = 58/123 (47%)
Query: 179 EIVQTLETKSPVTSAEVSQDGRYIT---TADGSTVKFWD-ANHFGLVKSYNMPCTIESAS 234
EI+Q L+ K+ V + E + G+ + K+ A+H GL S ++P I +
Sbjct: 180 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGL-HSASIP-GILALD 237
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
L P NK + GG D V FD + +A KGH V V F P E S S D TI
Sbjct: 238 LCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATI 297
Query: 295 RIW 297
RIW
Sbjct: 298 RIW 300
>RGD|1305789 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10116 "Rattus
norvegicus" [GO:0003779 "actin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305789 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00390000009416
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 OrthoDB:EOG4WH8KB
EMBL:AY986483 EMBL:BC085864 IPI:IPI00215349 RefSeq:NP_001014157.1
UniGene:Rn.3168 HSSP:Q11176 ProteinModelPortal:Q5RKI0 STRING:Q5RKI0
PhosphoSite:Q5RKI0 World-2DPAGE:0004:Q5RKI0 PRIDE:Q5RKI0
Ensembl:ENSRNOT00000024012 GeneID:360950 KEGG:rno:360950
InParanoid:Q5RKI0 NextBio:674693 Genevestigator:Q5RKI0
Uniprot:Q5RKI0
Length = 606
Score = 180 (68.4 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 82/348 (23%), Positives = 152/348 (43%)
Query: 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWI---GTFEGHKGAVWSCCLDT 71
HSR V + +SP DG +AS D + +G+TG+ + G + H G +++
Sbjct: 188 HSRFVNCVRFSP---DGNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSP 244
Query: 72 NALRAASASADFSAKVWDALTGDVLHSFEHKHIVR----ACSFSEDTHLLLTGGMEKILR 127
++ SAS D ++K+WD V+ +F V C + +D HLL + +
Sbjct: 245 DSTHLLSASGDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCLWQKD-HLLSIS-LSGYIN 302
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSD--QTILSTCTDMGGVRLWDVRSGEIVQTLE 185
D N P P R + S++ + +H + ++ + + + G + WD +GE +
Sbjct: 303 YLDKNNPSKPLRVIKGHSKSIQCLT-VHKNGGKSYIYSGSHDGHINYWDSETGEN-DSFS 360
Query: 186 TK---SPVTSAEVSQDGRYITTADGSTVKFW-----DANHFGLVKSYNMPCTIESASLEP 237
K + V+ V + G+ ++ + TV++ D + G+VK P + ++ P
Sbjct: 361 GKGHTNQVSRMTVDESGQLVSCSMDDTVRYTNLTLRDYSGQGVVKLDVQP---KCVAVGP 417
Query: 238 KYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
V G+ + ++ D I N G+ V V PGG++ A G DG +R++
Sbjct: 418 GGYTVVVCIGQIVLLK--DQKKCFSID-NPGYEPEVVAVH--PGGDTVAVGGSDGNVRVY 472
Query: 298 QT-GPVTNDDTETLTANGTIGKVKVTAD-------EVSRKIEGFHIAD 337
G D+ + L A G + + + D + S+ + F +AD
Sbjct: 473 SILGATLKDEGKLLEAKGPVTDLAYSHDGAFLAVCDASKVVTVFSVAD 520
Score = 144 (55.7 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 51/210 (24%), Positives = 85/210 (40%)
Query: 100 EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR-EVDRSPGSVRTVAWLHSDQ 158
EH H V ++ + +G + LRI+D + + + E G ++ +AW +
Sbjct: 56 EHAHQVVVAKYAPSGFYIASGDISGKLRIWDTTQKEHILKYEYQPFAGKIKDIAWTEDSK 115
Query: 159 TILSTCTD---MGGVRLWDVRS--GEIVQTLETKSPVTSAEVSQDGRY--ITTADGSTVK 211
I G V LWD S GEI T K + S ++ Q+ Y T +D +
Sbjct: 116 RIAVVGEGREKFGAVFLWDTGSSVGEI--TGHNKV-INSVDIKQNRPYRLATGSDDNCAA 172
Query: 212 FWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIAC---NK 267
F++ F + + P GN+F D + +D TG ++ +K
Sbjct: 173 FFEGPPFKFKFTIGDHSRFVNCVRFSPD-GNRFATASADGQIFIYDGKTGEKVCALGGSK 231
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
H G ++ + +SP S S D T +IW
Sbjct: 232 AHDGGIYAISWSPDSTHLLSASGDKTSKIW 261
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 55/261 (21%), Positives = 103/261 (39%)
Query: 49 ETGDWIGTFEGHKGAVWSCCLDTNA-LRAASASADFSAKVWDALTGDVLHSF-EHKHIVR 106
+TG +G GH + S + N R A+ S D A ++ + +H V
Sbjct: 134 DTGSSVGEITGHNKVINSVDIKQNRPYRLATGSDDNCAAFFEGPPFKFKFTIGDHSRFVN 193
Query: 107 ACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSP---GSVRTVAWLHSDQTILST 163
FS D + T + + I+D + + S G + ++W +LS
Sbjct: 194 CVRFSPDGNRFATASADGQIFIYD-GKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSA 252
Query: 164 CTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVS---QDGRYITTADGSTVKFWDANH--- 217
D ++WDV +V T S V ++ Q ++ + + + D N+
Sbjct: 253 SGDKTS-KIWDVNVNSVVSTFPMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPSK 311
Query: 218 -FGLVKSYNMPCTIESASLEPKYGNKFV-AGGEDMWVRFFDFHTG-NEIACNKGHHGPVH 274
++K ++ +I+ ++ G ++ +G D + ++D TG N+ KGH V
Sbjct: 312 PLRVIKGHSK--SIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDSFSGKGHTNQVS 369
Query: 275 CVRFSPGGESYASGSEDGTIR 295
+ G+ S S D T+R
Sbjct: 370 RMTVDESGQ-LVSCSMDDTVR 389
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 175 (66.7 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 59/253 (23%), Positives = 106/253 (41%)
Query: 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDTHL 116
+GH+ V + S+S D +WDA T + H+ + AC+++ +
Sbjct: 67 KGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNF 126
Query: 117 LLTGGMEKILRIFDLNRPD---APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
+ GG++ + ++ + + A R V + + +SDQ IL+ D LW
Sbjct: 127 VACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGD-STCALW 185
Query: 174 DVRSGEIVQTLETKS-PVTSAEVSQDGRYITTADGSTVKF---WDANHFGLVKSYN-MPC 228
DV SG+++Q+ S V + +++ + T GS + WD +V+S+
Sbjct: 186 DVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQS 245
Query: 229 TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIA--CNKGHHGPVHCVRFSPGGESYA 286
+ S P G+ G +D R +D E+A + V+ V FS G
Sbjct: 246 DVNSVKFHP-CGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLF 304
Query: 287 SGSEDGTIRIWQT 299
+G D T+ +W T
Sbjct: 305 AGYNDYTVNLWDT 317
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 69/300 (23%), Positives = 119/300 (39%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
V GH V+ +SP D +IS+S+D ++ + T + + +C
Sbjct: 65 VLKGHQAKVLCTDWSP---DKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYA 121
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSFE-----HKHIVRACSFSEDTHLLLTGGMEKI 125
+ A D V+ + + + + + H + C + +LTG +
Sbjct: 122 PSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDST 181
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTV--AWLHSDQTILS-TCTDMGGVRLWDVRSGEIVQ 182
++D+ S G V + A + T +S +C M + WD+RSG +VQ
Sbjct: 182 CALWDVESGQLLQSFHGHS-GDVMAIDLAPNETGNTFVSGSCDRMAFI--WDMRSGHVVQ 238
Query: 183 TLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDAN---HFGLVKSYNMPCTIESASLEP 237
+ E +S V S + G I T +D S+ + +D + ++ + S
Sbjct: 239 SFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSV 298
Query: 238 KYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G AG D V +D + GH V CV+ SP G + ++GS D TIR+W
Sbjct: 299 S-GRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 178 (67.7 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 63/270 (23%), Positives = 104/270 (38%)
Query: 15 HSRPVVDLFYSPITP-DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
HS + + + P D +++ D + ++ + + + T +GH V S +
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ 276
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
SAS D + ++W + H+ V S LL+ ++ D+
Sbjct: 277 DLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQ 336
Query: 133 RPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ D + G T A H D I T T +++WD++ V S P+T
Sbjct: 337 TGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPIT 396
Query: 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGED 249
S S++G Y+ TA D S+VK WD K+ + E SL ++A GG D
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 456
Query: 250 M-------WVRFFDF--HTGNEIACNKGHH 270
+ W F H+G GHH
Sbjct: 457 VQIYICKQWTEILHFTEHSGLTTGVAFGHH 486
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 54/223 (24%), Positives = 95/223 (42%)
Query: 96 LHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155
LHS I+ DT+ +LTGG +K + +FD + + V +V + H
Sbjct: 216 LHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTK-KVTSVVF-H 273
Query: 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFW 213
Q ++ + + +R+W V + VQ + +S VT + G Y+ +++D F
Sbjct: 274 PSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFS 333
Query: 214 DANHFGL---VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH 270
D + V C++ A P G F G D ++ +D +A GH
Sbjct: 334 DIQTGRVLTKVTDETSGCSLTCAQFHPD-GLIFGTGTMDSQIKIWDLKERTNVANFPGHS 392
Query: 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
GP+ + FS G A+ ++D ++++W + N T L N
Sbjct: 393 GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNN 435
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 42/123 (34%), Positives = 58/123 (47%)
Query: 179 EIVQTLETKSPVTSAEVSQDGRYIT---TADGSTVKFWD-ANHFGLVKSYNMPCTIESAS 234
EI+Q L+ K+ V + E + G+ + K+ A+H GL S ++P I +
Sbjct: 171 EIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGL-HSASIP-GILALD 228
Query: 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTI 294
L P NK + GG D V FD + +A KGH V V F P + S S D TI
Sbjct: 229 LCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATI 288
Query: 295 RIW 297
RIW
Sbjct: 289 RIW 291
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 180 (68.4 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 64/244 (26%), Positives = 112/244 (45%)
Query: 55 GTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSED 113
GTF GH G +W C TN + S S+D K+WD +T H+ IV + +
Sbjct: 426 GTFVGHNGPIW-CMTVTNGM-LISGSSDMKVKIWDLVTLKCKQVLSGHEGIVHTLAVIGN 483
Query: 114 THLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLW 173
L +G ++ +R++DL + V R +V A + + + S +++W
Sbjct: 484 R--LFSGSSDQTIRVWDLETFEC--LSVLRDDNTV--CALVIAAGYLFSG--SFQHIKVW 535
Query: 174 DVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESA 233
D+ + E VQTL+ S A ++ G Y+ + + V+ WD +F V++ +P S
Sbjct: 536 DLETFECVQTLKGNSHWVRA-LTVSGGYLYSGAYNVVRVWDLANFECVQT--IPGGSGSI 592
Query: 234 SLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGT 293
+ +AG + + ++ T I +GH G V+ + S + + SGS D T
Sbjct: 593 YSLAVSNRRLLAGTYENTIVVWNLDTFEIINKLEGHIGAVYTLAVSD--KKFYSGSYDST 650
Query: 294 IRIW 297
I++W
Sbjct: 651 IKVW 654
Score = 127 (49.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 70/288 (24%), Positives = 124/288 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ P+ + +T +G LIS S D + + T GH+G V + + N
Sbjct: 430 GHNGPI---WCMTVT-NGM-LISGSSDMKVKIWDLVTLKCKQVLSGHEGIVHTLAVIGN- 483
Query: 74 LRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR 133
R S S+D + +VWD T + L + V C+ L +G + I +++DL
Sbjct: 484 -RLFSGSSDQTIRVWDLETFECLSVLRDDNTV--CALVIAAGYLFSGSFQHI-KVWDLET 539
Query: 134 PDAPPREVDRSPGSVRTVAWLH-SDQTILSTCTDMGGVRLWDVRSGEIVQTLETKS-PVT 191
+ V G+ V L S + S ++ VR+WD+ + E VQT+ S +
Sbjct: 540 FEC----VQTLKGNSHWVRALTVSGGYLYSGAYNV--VRVWDLANFECVQTIPGGSGSIY 593
Query: 192 SAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPC-TIESASLEPKYGNKFVAGGEDM 250
S VS + R + +T+ W+ + F ++ + + ++ K KF +G D
Sbjct: 594 SLAVS-NRRLLAGTYENTIVVWNLDTFEIINKLEGHIGAVYTLAVSDK---KFYSGSYDS 649
Query: 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298
++ ++ N+ H V + S G SGS D +I++W+
Sbjct: 650 TIKVWNDSLVCVQTLNR-HTSSVESIVVSSG--CVFSGSADNSIKVWK 694
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 178 (67.7 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 77/301 (25%), Positives = 124/301 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK---GAVW----- 65
G RP+ Y +P+ L +A L + + T GH GA+
Sbjct: 228 GDDRPIS---YCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKS 284
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACS--FSEDTHLLLTGGME 123
+ LD + AS +AD S K+W + + + E H VR + L T +
Sbjct: 285 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEG-HTVRVARVMWHPSGRFLGTTCYD 343
Query: 124 KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC-TDMGGVRLWDVRSGEIVQ 182
+ R++DL + + S G V +A+ H D ++ T D G R+WD+R+G +
Sbjct: 344 RSWRLWDLEAQEEILHQEGHSMG-VYDIAF-HQDGSLAGTGGLDAFG-RVWDLRTGRCIM 400
Query: 183 TLETK-SPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYNMPC---TIESASLEP 237
LE + S +G +I T G +T K WD V Y +P + EP
Sbjct: 401 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCV--YTIPAHQNLVTGVKFEP 458
Query: 238 KYGNKFVAGGEDMWVRFFDFHTG-NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296
+G+ + G D + + H G + + GH G V + S G+ A+ S D T ++
Sbjct: 459 IHGDFLLTGAYDNTAKIWT-HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 517
Query: 297 W 297
W
Sbjct: 518 W 518
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 178 (67.7 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 77/301 (25%), Positives = 124/301 (41%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHK---GAVW----- 65
G RP+ Y +P+ L +A L + + T GH GA+
Sbjct: 228 GDDRPIS---YCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKS 284
Query: 66 SCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACS--FSEDTHLLLTGGME 123
+ LD + AS +AD S K+W + + + E H VR + L T +
Sbjct: 285 TVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEG-HTVRVARVMWHPSGRFLGTTCYD 343
Query: 124 KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC-TDMGGVRLWDVRSGEIVQ 182
+ R++DL + + S G V +A+ H D ++ T D G R+WD+R+G +
Sbjct: 344 RSWRLWDLEAQEEILHQEGHSMG-VYDIAF-HQDGSLAGTGGLDAFG-RVWDLRTGRCIM 400
Query: 183 TLETK-SPVTSAEVSQDGRYITTADG-STVKFWDANHFGLVKSYNMPC---TIESASLEP 237
LE + S +G +I T G +T K WD V Y +P + EP
Sbjct: 401 FLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCV--YTIPAHQNLVTGVKFEP 458
Query: 238 KYGNKFVAGGEDMWVRFFDFHTG-NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296
+G+ + G D + + H G + + GH G V + S G+ A+ S D T ++
Sbjct: 459 IHGDFLLTGAYDNTAKIWT-HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKL 517
Query: 297 W 297
W
Sbjct: 518 W 518
>UNIPROTKB|Q2KJH4 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9913
"Bos taurus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 EMBL:BC105341
IPI:IPI00716638 RefSeq:NP_001039811.1 UniGene:Bt.59546
ProteinModelPortal:Q2KJH4 STRING:Q2KJH4 PRIDE:Q2KJH4 GeneID:533223
KEGG:bta:533223 CTD:9948 OrthoDB:EOG4WH8KB NextBio:20875962
Uniprot:Q2KJH4
Length = 606
Score = 179 (68.1 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 78/335 (23%), Positives = 147/335 (43%)
Query: 28 TPDGFFLISASKDSSPMLRNGETGDWI---GTFEGHKGAVWSCCLDTNALRAASASADFS 84
+PDG +AS D + +G+TG+ + G + H G +++ ++ SAS D +
Sbjct: 198 SPDGNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKT 257
Query: 85 AKVWDALTGDVLHSFEHKHIVR----ACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPRE 140
+K+WD V+++F V C + +D HLL + + D N P P R
Sbjct: 258 SKIWDVNVNSVVNTFTMGSNVLDQQLGCLWQKD-HLLSIS-LSGYINYLDKNNPSKPLRV 315
Query: 141 VDRSPGSVRTVAWLHSD--QTILSTCTDMGGVRLWDVRSGEIVQTLETK---SPVTSAEV 195
+ S++ + +H + ++ + + + G + WD +GE + K + V+ V
Sbjct: 316 IKGHSKSIQCLT-VHKNGGKSYIYSGSHDGHINYWDSETGEN-DSFAGKGHTNQVSRMTV 373
Query: 196 SQDGRYITTADGSTVKFW-----DANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDM 250
+ G+ ++ + TV++ D + G+VK P + ++ P V G+ +
Sbjct: 374 DEHGQLVSCSMDDTVRYTNLTLRDYSGQGVVKLDVQP---KCLAVGPGGYTVVVCIGQIV 430
Query: 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT-GPVTNDDTET 309
++ D I N G+ V V PGGE+ A G DG +R++ G D+ +
Sbjct: 431 LLK--DQRKCFSID-NPGYEPEVVAVH--PGGETVAVGGADGNVRLYSILGTTLKDEGKL 485
Query: 310 LTANGTIGKVKVTAD-------EVSRKIEGFHIAD 337
L A G + + + D + S+ + F +AD
Sbjct: 486 LEAKGPVTDLAFSHDGAFLAVCDASKVVTVFSVAD 520
Score = 149 (57.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 54/226 (23%), Positives = 93/226 (41%)
Query: 100 EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR-EVDRSPGSVRTVAWLHSDQ 158
EH H V ++ + +G + LRI+D + + + E G ++ +AW +
Sbjct: 56 EHAHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSK 115
Query: 159 TILSTCTD---MGGVRLWDVRS--GEIVQTLETKSPVTSAEVSQDGRY--ITTADGSTVK 211
I G V LWD S GEI T K + S ++ Q Y +T +D +
Sbjct: 116 RIAVVGEGREKFGAVFLWDSGSSVGEI--TGHNKV-INSVDIKQSRPYRLVTGSDDNCAA 172
Query: 212 FWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIAC---NK 267
F++ F + + + P GN+F D + +D TG ++ +K
Sbjct: 173 FFEGPPFKFKFTISDHGRFVNCVRFSPD-GNRFATASADGQIFIYDGKTGEKVCALGGSK 231
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTAN 313
H G ++ + +SP S S D T +IW + +T T+ +N
Sbjct: 232 AHDGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVNTFTMGSN 277
Score = 85 (35.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC-LDTN 72
GH++ + + P + L++ S D+ G + T H G +C +
Sbjct: 144 GHNKVINSVDIKQSRP--YRLVTGSDDNCAAFFEGPPFKFKFTISDH-GRFVNCVRFSPD 200
Query: 73 ALRAASASADFSAKVWDALTGDVL----HSFEHKHIVRACSFSED-THLLLTGGMEKILR 127
R A+ASAD ++D TG+ + S H + A S+S D THLL G +K +
Sbjct: 201 GNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASG-DKTSK 259
Query: 128 IFDLN 132
I+D+N
Sbjct: 260 IWDVN 264
Score = 77 (32.2 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
GHH + C+ +SP E +ASG D + +W
Sbjct: 530 GHHAKIVCLAWSPDNEHFASGGMDMMVYVW 559
>RGD|1310992 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310992 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:BC131851 IPI:IPI00360292 RefSeq:NP_001101117.1 UniGene:Rn.7959
ProteinModelPortal:A2RRU3 STRING:A2RRU3 PRIDE:A2RRU3
Ensembl:ENSRNOT00000022259 GeneID:310019 KEGG:rno:310019
UCSC:RGD:1310992 InParanoid:A2RRU3 NextBio:661554
ArrayExpress:A2RRU3 Genevestigator:A2RRU3 Uniprot:A2RRU3
Length = 528
Score = 178 (67.7 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 56/205 (27%), Positives = 100/205 (48%)
Query: 102 KHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTIL 161
K +F +D LL+ G + ++++FD++ AP R+ + +V TV + ++
Sbjct: 80 KDTAYCATFRQDGQLLVAGSEDGVVQLFDISGR-APLRQFEGHTKAVHTVDFTADKYHVV 138
Query: 162 STCTDMGGVRLWDVRSGEIVQTLETKSPVT----SAEVSQDGRYITTADGSTVKFWDA-- 215
S D V+LWD+ + + + T + S +++++ D ++T + TVK +DA
Sbjct: 139 SGADDYT-VKLWDIPNSKEILTFKEHSDYVRCGCASKLNPD-LFVTGSYDHTVKMFDART 196
Query: 216 NHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACN-KGHHGPVH 274
N L + P +ES L P G AGG +V+ +D G ++ + K HH V
Sbjct: 197 NKNVLCVEHGQP--VESVLLFPSGGLLVSAGGR--YVKVWDMLKGGQLLVSLKNHHKTVT 252
Query: 275 CVRFSPGGESYASGSEDGTIRIWQT 299
C+ S G+ SGS D ++I+ T
Sbjct: 253 CLCLSSSGQRLLSGSLDRKVKIYST 277
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 53/213 (24%), Positives = 98/213 (46%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
DG L++ S+D L + + FEGH AV + + S + D++ K+WD
Sbjct: 91 DGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWD 150
Query: 90 ALTGDVLHSF-EHKHIVRA-CSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGS 147
+ +F EH VR C+ + L +TG + +++FD R + V+
Sbjct: 151 IPNSKEILTFKEHSDYVRCGCASKLNPDLFVTGSYDHTVKMFDA-RTNKNVLCVEHGQ-P 208
Query: 148 VRTVAWLHSDQTILSTCTDMGG--VRLWDV-RSGEIVQTLETK-SPVTSAEVSQDG-RYI 202
V +V S ++S GG V++WD+ + G+++ +L+ VT +S G R +
Sbjct: 209 VESVLLFPSGGLLVSA----GGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLL 264
Query: 203 TTADGSTVKFWDANHFGLVKSYNMPCTIESASL 235
+ + VK + + +V S++ +I S +L
Sbjct: 265 SGSLDRKVKIYSTTSYKVVHSFDYAASILSLAL 297
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 174 (66.3 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 59/252 (23%), Positives = 105/252 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ ++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ + GG++ I I++L + R PG ++ D I+++ D L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTT-CAL 168
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSYNMPCT- 229
WD+ +G+ T S V S +S D + +++ A ++ K WD +S+ +
Sbjct: 169 WDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISD 228
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESY 285
I + S P G F G +D R FD E+ H + C V FS G
Sbjct: 229 INAVSFFPS-GYAFATGSDDATCRLFDLRADQELLLYS--HDNIICGITSVAFSKSGRLL 285
Query: 286 ASGSEDGTIRIW 297
+G +D +W
Sbjct: 286 LAGYDDFNCSVW 297
Score = 167 (63.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 66/278 (23%), Positives = 116/278 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ S
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETGQQTTTFTGHS 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDG-RYI 202
G V +++ +T +S D +LWD+R G Q+ S + + G +
Sbjct: 185 -GDVMSLSLSPDLKTFVSGACDASS-KLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFA 242
Query: 203 TTADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ L+ S+ N+ C I S + K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFS-KSGRLLLAGYDDFNCSVWDALK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G GH V C+ + G + A+GS D +RIW
Sbjct: 302 GGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 151 (58.2 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 53/186 (28%), Positives = 81/186 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+I++S D++ L + ETG TF GH G V S L + S + D S+K+WD G
Sbjct: 157 IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR--EVDRSPGSVRT 150
SF H + A SF + TG + R+FDL R D D + +
Sbjct: 217 MCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDL-RADQELLLYSHDNIICGITS 275
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GS 208
VA+ S + +L+ D +WD G L + V+ V+ DG + T S
Sbjct: 276 VAFSKSGRLLLAGYDDFN-CSVWDALKGGRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 209 TVKFWD 214
++ W+
Sbjct: 335 FLRIWN 340
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 174 (66.3 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 59/252 (23%), Positives = 105/252 (41%)
Query: 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI-VRACSFSEDT 114
T GH +++ ++ SAS D +WD+ T + +H+ + V C+++
Sbjct: 50 TLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSG 109
Query: 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRL 172
+ + GG++ I I++L + R PG ++ D I+++ D L
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTT-CAL 168
Query: 173 WDVRSGEIVQTLETKS-PVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKSYNMPCT- 229
WD+ +G+ T S V S +S D + +++ A ++ K WD +S+ +
Sbjct: 169 WDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISD 228
Query: 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC----VRFSPGGESY 285
I + S P G F G +D R FD E+ H + C V FS G
Sbjct: 229 INAVSFFPS-GYAFATGSDDATCRLFDLRADQELLLYS--HDNIICGITSVAFSKSGRLL 285
Query: 286 ASGSEDGTIRIW 297
+G +D +W
Sbjct: 286 LAGYDDFNCSVW 297
Score = 166 (63.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 66/278 (23%), Positives = 116/278 (41%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
D L+SAS+D ++ + T + + V +C + A D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 90 ALT--GDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS 144
T G+V S E H + C F +D ++ + G + ++D+ S
Sbjct: 126 LKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETGQQTTTFTGHS 184
Query: 145 PGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDG-RYI 202
G V +++ +T +S D +LWD+R G Q+ S + + G +
Sbjct: 185 -GDVMSLSLSPDLKTFVSGACDASS-KLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFA 242
Query: 203 TTADGSTVKFWD--ANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259
T +D +T + +D A+ L+ S+ N+ C I S + K G +AG +D +D
Sbjct: 243 TGSDDATCRLFDLRADQELLLYSHDNIICGITSVAFS-KSGRLLLAGYDDFNCSVWDALK 301
Query: 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
G GH V C+ + G + A+GS D +RIW
Sbjct: 302 GGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 149 (57.5 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 53/186 (28%), Positives = 81/186 (43%)
Query: 34 LISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93
+I++S D++ L + ETG TF GH G V S L + S + D S+K+WD G
Sbjct: 157 IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDG 216
Query: 94 DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR--EVDRSPGSVRT 150
SF H + A SF + TG + R+FDL R D D + +
Sbjct: 217 MCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDL-RADQELLLYSHDNIICGITS 275
Query: 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTAD-GS 208
VA+ S + +L+ D +WD G L + V+ V+ DG + T S
Sbjct: 276 VAFSKSGRLLLAGYDDFN-CSVWDALKGGRSGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 209 TVKFWD 214
++ W+
Sbjct: 335 FLRIWN 340
>FB|FBgn0032030 [details] [associations]
symbol:Wdr82 species:7227 "Drosophila melanogaster"
[GO:0008352 "katanin complex" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] [GO:0048188 "Set1C/COMPASS
complex" evidence=IDA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0080182 "histone H3-K4 trimethylation"
evidence=IMP] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048188 GO:GO:0080182
HSSP:P16649 KO:K14962 GeneTree:ENSGT00530000063965 OMA:CTNMAFW
EMBL:AY069081 RefSeq:NP_609217.1 UniGene:Dm.6967 SMR:Q9VLN1
IntAct:Q9VLN1 MINT:MINT-1570298 STRING:Q9VLN1
EnsemblMetazoa:FBtr0079650 GeneID:34153 KEGG:dme:Dmel_CG17293
UCSC:CG17293-RA FlyBase:FBgn0032030 InParanoid:Q9VLN1
OrthoDB:EOG4C5B12 GenomeRNAi:34153 NextBio:787125 Uniprot:Q9VLN1
Length = 317
Score = 173 (66.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 79/275 (28%), Positives = 129/275 (46%)
Query: 29 PDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW 88
P+G LIS S+D ++ + E G T K V T+A A S S KV
Sbjct: 33 PNGEHLISCSEDDQIVIYDCEKGTQSRTVNSKKYGV-DLIHFTHANNTAIHS---STKVD 88
Query: 89 DALTGDVLHSFEH--------KHIVRAC-SFSEDTHLLLTGGMEKILRIFDLNRPDAPPR 139
D + LH ++ K ++ C S EDT L+G ++K LR++DL P+ +
Sbjct: 89 DTIRYLSLHDNKYLRYFPGHTKKVISLCISPVEDT--FLSGSLDKTLRLWDLRSPNC--Q 144
Query: 140 EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS---GEIVQ---TLETKSPVTSA 193
+ G R +A + I + + ++L+D+RS G V E + T
Sbjct: 145 GLMHLSG--RPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQEKECDWTGL 202
Query: 194 EVSQDGRYIT-TADGSTVKFWDANHFGLVKSY-----NMPCTIESASLEPKYGNKFV-AG 246
+ S+DG+ I + +GS ++ DA H ++++ N IE AS P ++F+ +G
Sbjct: 203 KFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIE-ASFSPD--SQFIFSG 259
Query: 247 GEDMWVRFFDFHTGNEIACNKGHH-GPVHCVRFSP 280
D V ++ TGN+++ G H GPV CV+F+P
Sbjct: 260 STDGRVHIWNADTGNKVSVLNGDHPGPVQCVQFNP 294
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 178 (67.7 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 56/218 (25%), Positives = 101/218 (46%)
Query: 1 MDKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGH 60
MD+K + + +GHS PV +SP D +L+S+S+D + L + +T + ++GH
Sbjct: 288 MDEKTASELKILYGHSGPVYGASFSP---DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 344
Query: 61 KGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLT 119
VW S D A++W L F H V F +++ + T
Sbjct: 345 NYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVAT 404
Query: 120 GGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE 179
G ++ +R++D+ + R G + ++ + + + + + TD G V LWD+ G
Sbjct: 405 GSADRTVRLWDVLNGNCV-RIFTGHKGPIHSLTFSPNGRFLATGATD-GRVLLWDIGHGL 462
Query: 180 IVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWDA 215
+V L+ + V S S+DG + + +TV+ WDA
Sbjct: 463 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 500
Score = 165 (63.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 47/188 (25%), Positives = 78/188 (41%)
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTVAWLHS----------DQTILSTCTDMGGVRLWDV 175
L + D D R +D S + + HS D+ L + ++ G VRLW +
Sbjct: 273 LSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 332
Query: 176 RSGEIVQTLETKS-PVTSAEVSQDGRYITTADGSTV-KFWDANHFGLVKSY-NMPCTIES 232
++ + + + PV + S G Y + V + W +H+ ++ + +
Sbjct: 333 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 392
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P N G D VR +D GN + GH GP+H + FSP G A+G+ DG
Sbjct: 393 TRFHPN-SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG 451
Query: 293 TIRIWQTG 300
+ +W G
Sbjct: 452 RVLLWDIG 459
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 56/223 (25%), Positives = 93/223 (41%)
Query: 38 SKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLH 97
S D + + +T + GH G V+ + S+S D + ++W T L
Sbjct: 280 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 339
Query: 98 SFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
++ H + V FS + ++GG +++ R++ + P R V + H
Sbjct: 340 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ-PLRIFAGHLADVNCTRF-HP 397
Query: 157 DQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWD 214
+ ++T + VRLWDV +G V+ K P+ S S +GR++ T A V WD
Sbjct: 398 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 457
Query: 215 ANHFGLVKSYNMPCTIESASLE-PKYGNKFVAGGEDMWVRFFD 256
H GL+ T SL + G +G D VR +D
Sbjct: 458 IGH-GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/174 (28%), Positives = 79/174 (45%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ PV D +SP G++ +S D L + + F GH V N+
Sbjct: 343 GHNYPVWDTQFSPY---GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 399
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
A+ SAD + ++WD L G+ + F HK + + +FS + L TG + + ++D+
Sbjct: 400 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 459
Query: 133 RPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRLWD-VRSGEIVQT 183
V G TV L D IL++ + VRLWD V++ E ++T
Sbjct: 460 HG----LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLET 509
Score = 125 (49.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 62/243 (25%), Positives = 93/243 (38%)
Query: 80 SADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR----- 133
S D ++ D T L + H V SFS D + LL+ + +R++ L
Sbjct: 280 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 339
Query: 134 ----PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTD-MGGVRLWDVRSGEIVQTLETKS 188
+ P + SP V+ H D+ TD +R++ +G +
Sbjct: 340 GYKGHNYPVWDTQFSPYGYYFVSGGH-DRVARLWATDHYQPLRIF---AGHLAD------ 389
Query: 189 PVTSAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVAG 246
V + Y+ T TV+ WD + V+ + I S + P G G
Sbjct: 390 -VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATG 447
Query: 247 GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDD 306
D V +D G + KGH V +RFS GE ASGS D T+R+W +D
Sbjct: 448 ATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAF-ED 506
Query: 307 TET 309
ET
Sbjct: 507 LET 509
>FB|FBgn0039067 [details] [associations]
symbol:wda "will decrease acetylation" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043970 "histone H3-K9
acetylation" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0000124
GeneTree:ENSGT00700000104377 KO:K03130 HSSP:Q02793 EMBL:AY118904
RefSeq:NP_651136.1 UniGene:Dm.13737 SMR:Q9VCN9 STRING:Q9VCN9
EnsemblMetazoa:FBtr0084387 GeneID:42750 KEGG:dme:Dmel_CG4448
UCSC:CG4448-RA CTD:42750 FlyBase:FBgn0039067 InParanoid:Q9VCN9
OMA:LWCATSG OrthoDB:EOG49W0WQ GenomeRNAi:42750 NextBio:830376
Uniprot:Q9VCN9
Length = 743
Score = 180 (68.4 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 56/214 (26%), Positives = 100/214 (46%)
Query: 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD 70
+ H+ P+ L SP+ G ++++ SKD S L + E + + GH V
Sbjct: 534 IYRSHNYPIWCLDESPV---GQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFH 590
Query: 71 TNALRAASASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIF 129
N A+ SAD S ++W A +G ++ F + + V +FS D +L G E +RIF
Sbjct: 591 PNGNYIATGSADHSVRLWCATSGKLMRVFADCRQAVTQLAFSPDGKMLAAAGEETKVRIF 650
Query: 130 DLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP 189
DL A E+ S+ +++W ++ + + C+D G +RLWD++ + + S
Sbjct: 651 DL-AAGAQLAELKDHSASISSLSWSTHNRHLATACSD-GTLRLWDIKK---LSPMSDNSS 705
Query: 190 VTSAEVSQDGRYITTADGSTVKFWDANHFGLVKS 223
S+ + R + T + S + D +G K+
Sbjct: 706 AGSSSSATTNR-VLTVNSSCQRLVDV-FYGTSKT 737
Score = 138 (53.6 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 42/185 (22%), Positives = 79/185 (42%)
Query: 158 QTILSTCTDMGGVRLWDVRSGE--IVQTLETKSPVTSAEVSQDGRYITTADGS-TVKFWD 214
Q +++ D+ RLW + I+ T+ V +G YI T +V+ W
Sbjct: 552 QYVVTGSKDLSA-RLWSLEKEHALIIYAGHTQD-VECVAFHPNGNYIATGSADHSVRLWC 609
Query: 215 ANHFGLVKSYNMPC--TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP 272
A L++ + C + + P G A GE+ VR FD G ++A K H
Sbjct: 610 ATSGKLMRVF-ADCRQAVTQLAFSPD-GKMLAAAGEETKVRIFDLAAGAQLAELKDHSAS 667
Query: 273 VHCVRFSPGGESYASGSEDGTIRIW---QTGPVTNDDTETLTANGTIGKVKVTADEVSRK 329
+ + +S A+ DGT+R+W + P++++ + +++ T +V R
Sbjct: 668 ISSLSWSTHNRHLATACSDGTLRLWDIKKLSPMSDNSSAGSSSSATTNRVLTVNSSCQRL 727
Query: 330 IEGFH 334
++ F+
Sbjct: 728 VDVFY 732
Score = 123 (48.4 bits), Expect = 0.00021, P = 0.00021
Identities = 45/162 (27%), Positives = 76/162 (46%)
Query: 201 YITTADGSTVKFWDANHF---GLVKSYNMP--CTIESASLEPKYGNKFVAGGEDMWVRFF 255
Y + D +T++ W A++ + +S+N P C ES P G V G +D+ R +
Sbjct: 513 YSVSKD-ATMRCWRAHNLHCAAIYRSHNYPIWCLDES----P-VGQYVVTGSKDLSARLW 566
Query: 256 DFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW--QTGPVTN---DDTETL 310
+ + GH V CV F P G A+GS D ++R+W +G + D + +
Sbjct: 567 SLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWCATSGKLMRVFADCRQAV 626
Query: 311 T--ANGTIGKVKVTADEVSRKIEGFHIADEGKMKE-KEEAAN 349
T A GK+ A E + K+ F +A ++ E K+ +A+
Sbjct: 627 TQLAFSPDGKMLAAAGEET-KVRIFDLAAGAQLAELKDHSAS 667
Score = 120 (47.3 bits), Expect = 0.00046, P = 0.00046
Identities = 46/207 (22%), Positives = 90/207 (43%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH++ V D+ +S P + S SKD++ + H +W CLD +
Sbjct: 495 GHTKGVTDVRFSAHYP---LMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIW--CLDESP 549
Query: 74 LR--AASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFD 130
+ + S D SA++W L + H V +F + + + TG + +R++
Sbjct: 550 VGQYVVTGSKDLSARLWSLEKEHALIIYAGHTQDVECVAFHPNGNYIATGSADHSVRLWC 609
Query: 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG-EIVQTLETKSP 189
D +V +A+ D +L+ + VR++D+ +G ++ + + +
Sbjct: 610 ATSGKLMRVFADCRQ-AVTQLAF-SPDGKMLAAAGEETKVRIFDLAAGAQLAELKDHSAS 667
Query: 190 VTSAEVSQDGRYITTA--DGSTVKFWD 214
++S S R++ TA DG T++ WD
Sbjct: 668 ISSLSWSTHNRHLATACSDG-TLRLWD 693
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 180 (68.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 63/227 (27%), Positives = 106/227 (46%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GHS PV +SP D +L+S S+D++ L + ET + ++GH VW
Sbjct: 677 GHSGPVYGCSFSP---DSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFG 733
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
A+AS D +A++W L F H F + + L TG +K R++++
Sbjct: 734 FYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQ 793
Query: 133 RPDAPPREVD-RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE--TKSP 189
+ R+P + TVA+ D +L+T + V LWD+ +G+ V+ ++ TK
Sbjct: 794 TGKCVRIFMGHRAP--IYTVAF-SPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKC- 849
Query: 190 VTSAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNMPCTIESASL 235
V S + S DG + + TV+ WD K++N + + +SL
Sbjct: 850 VYSLDFSCDGSILASGSSDCTVRLWDVK-----KAFNSSLSTQPSSL 891
Score = 122 (48.0 bits), Expect = 0.00037, P = 0.00037
Identities = 70/292 (23%), Positives = 113/292 (38%)
Query: 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89
+G F SAS SS M NG +G+ E +K + N L + S+S+ S K+
Sbjct: 619 NGNFASSASSASSAM--NG-SGN---NNENNKSTTAN-----NNLNSGSSSS--SNKLQK 665
Query: 90 ALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP---------DAPPR 139
+F H V CSFS D+ LL+ + R++ + + P
Sbjct: 666 QQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVW 725
Query: 140 EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDG 199
+V SP H L T + +R++ +G + S + +
Sbjct: 726 DVSFSPFGFYFATASHDRTARLWTTNHISPLRIF---TGHL-------SDCNTVRFHPNI 775
Query: 200 RYITT-ADGSTVKFWDANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDF 257
Y+ T ++ + + W+ V+ + I + + P G GED V +D
Sbjct: 776 NYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPD-GRLLATAGEDTSVILWDL 834
Query: 258 HTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTET 309
TG ++ GH V+ + FS G ASGS D T+R+W N T
Sbjct: 835 STGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKAFNSSLST 886
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 76/311 (24%), Positives = 131/311 (42%)
Query: 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAA 77
PV + +SP +G LI+ + L NG ++ + H A+ + +N
Sbjct: 135 PVYSVCWSP---EGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLL 191
Query: 78 SASADFSAKVWDALTGDVLHSFE-HK-HIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
SA K W + H F HK +R +F+ T + R++D R
Sbjct: 192 SADQGGYVKYWQPNMNNA-HMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFAR-- 248
Query: 136 APPREVDRSPGS-VRTVAWLHSDQTILSTCT--DMGGVRLWDVRSGEIVQTL-ETKSPVT 191
V R G+ VR + W H + +++T + V++WD +SG + TL E KS V
Sbjct: 249 YTEERVLRGHGAEVRCIDW-HPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVM 307
Query: 192 SAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGED 249
+ E +++G ++ T VK +D +++Y + S + P + FV+GG D
Sbjct: 308 AVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGD 367
Query: 250 MWVRFFDFHTGNEIAC-NKGHHGPVHCVRFSPGGESYASGSEDGTIRIW-QTGPV-TNDD 306
+ ++ EI H + +++ P G A+GS D + W + P T +D
Sbjct: 368 GSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNRPGDTVED 427
Query: 307 TETLTANGTIG 317
L+ IG
Sbjct: 428 IFGLSNTNMIG 438
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 57/217 (26%), Positives = 95/217 (43%)
Query: 95 VLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP---REVDRSPGS--VR 149
+LH+ EH ++ FS D L TG + +F++ E + G VR
Sbjct: 292 LLHTLEHTSVICYVRFSADGKFLATG-CNRAAMVFNVETGKLITLLQEESSKREGDLYVR 350
Query: 150 TVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADGS 208
+VA+ D L+T + +R+WD+ + + L + + S + S+DG+ + + G
Sbjct: 351 SVAF-SPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGD 409
Query: 209 -TVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK 267
TV WD + + + P G AG D +R + +G +
Sbjct: 410 RTVCLWDVEAGEQKLILHTDDGVTTVMFSPD-GQFIAAGSLDKVIRIWT-SSGTLVEQLH 467
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTN 304
GH V+ V FSP G+ SGS D TI++W+ V+N
Sbjct: 468 GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSN 504
Score = 152 (58.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 57/237 (24%), Positives = 103/237 (43%)
Query: 77 ASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
A+ D ++WD V H+ + + FS+D L++G ++ + ++D+ +
Sbjct: 362 ATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGE 421
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAE 194
+ + + V TV + Q I + D +R+W SG +V+ L + V S
Sbjct: 422 Q--KLILHTDDGVTTVMFSPDGQFIAAGSLDKV-IRIW-TSSGTLVEQLHGHEESVYSVA 477
Query: 195 VSQDGRYITTAD-GSTVKFWDANHFGLV--KSYNMP--CT---------IESASLEPKYG 240
S DG+Y+ + +T+K W+ V Y C I S ++ P G
Sbjct: 478 FSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPD-G 536
Query: 241 NKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
++G +D ++F+ + + +GH+ V V SP G +A+GS D RIW
Sbjct: 537 KWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
Score = 135 (52.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 58/259 (22%), Positives = 114/259 (44%)
Query: 21 DLFYSPI--TPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAAS 78
DL+ + +PDG +L + +D + + GH+ ++S + S
Sbjct: 346 DLYVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVS 405
Query: 79 ASADFSAKVWDALTGD---VLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135
S D + +WD G+ +LH+ + V FS D + G ++K++RI+ +
Sbjct: 406 GSGDRTVCLWDVEAGEQKLILHTDDG---VTTVMFSPDGQFIAAGSLDKVIRIWTSS--G 460
Query: 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV-----------RSGEIVQTL 184
++ SV +VA+ + ++S D ++LW++ + G I +
Sbjct: 461 TLVEQLHGHEESVYSVAFSPDGKYLVSGSLD-NTIKLWELQCVSNVAPSMYKEGGICKQT 519
Query: 185 ET--KSPVTSAEVSQDGRYITTADGS-TVKFW--DANHFGL-VKSYNMPCTIESASLEPK 238
T K + S VS DG++I + T++FW D+ H L ++ +N ++ S ++ P
Sbjct: 520 FTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNN--SVISVAVSPN 577
Query: 239 YGNKFVAGGEDMWVRFFDF 257
G+ F G D+ R + +
Sbjct: 578 -GHCFATGSGDLRARIWSY 595
>UNIPROTKB|O75083 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=TAS] [GO:0002576 "platelet
degranulation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0030168 "platelet activation"
evidence=TAS] Reactome:REACT_604 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005576
GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0002576 GO:GO:0007605 EMBL:AC005674
HOVERGEN:HBG000780 CTD:9948 EMBL:AF020056 EMBL:AF020260
EMBL:AB010427 EMBL:AK291614 EMBL:AC093664 EMBL:BC000201
EMBL:BC002489 EMBL:BC030541 EMBL:AL050108 EMBL:AL110208
IPI:IPI00746165 IPI:IPI00903292 PIR:T13152 RefSeq:NP_005103.2
RefSeq:NP_059830.1 UniGene:Hs.128548 ProteinModelPortal:O75083
SMR:O75083 IntAct:O75083 STRING:O75083 PhosphoSite:O75083
OGP:O75083 REPRODUCTION-2DPAGE:IPI00746165
REPRODUCTION-2DPAGE:O75083 UCD-2DPAGE:O75083 PaxDb:O75083
PRIDE:O75083 Ensembl:ENST00000382451 Ensembl:ENST00000382452
Ensembl:ENST00000499869 Ensembl:ENST00000502702 GeneID:9948
KEGG:hsa:9948 UCSC:uc021xlv.1 UCSC:uc021xlw.1 GeneCards:GC04M010075
HGNC:HGNC:12754 HPA:CAB020804 MIM:604734 neXtProt:NX_O75083
PharmGKB:PA37358 OMA:LKDQKKC ChiTaRS:WDR1 GenomeRNAi:9948
NextBio:37534 ArrayExpress:O75083 Bgee:O75083 CleanEx:HS_WDR1
Genevestigator:O75083 GermOnline:ENSG00000071127 Uniprot:O75083
Length = 606
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 83/348 (23%), Positives = 151/348 (43%)
Query: 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWI---GTFEGHKGAVWSCCLDT 71
HSR V + +SP DG +AS D + +G+TG+ + G + H G +++
Sbjct: 188 HSRFVNCVRFSP---DGNRFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSP 244
Query: 72 NALRAASASADFSAKVWDALTGDVLHSFEHKHIVR----ACSFSEDTHLLLTGGMEKILR 127
++ SAS D ++K+WD V+ +F V C + +D HLL + +
Sbjct: 245 DSTHLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKD-HLLSVS-LSGYIN 302
Query: 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSD--QTILSTCTDMGGVRLWDVRSGEIVQTLE 185
D N P P + S++ + +H + ++ + + + G + WD +GE +
Sbjct: 303 YLDRNNPSKPLHVIKGHSKSIQCLT-VHKNGGKSYIYSGSHDGHINYWDSETGEN-DSFA 360
Query: 186 TK---SPVTSAEVSQDGRYITTADGSTVKFW-----DANHFGLVKSYNMPCTIESASLEP 237
K + V+ V + G+ I+ + TV++ D + G+VK P + ++ P
Sbjct: 361 GKGHTNQVSRMTVDESGQLISCSMDDTVRYTSLMLRDYSGQGVVKLDVQP---KCVAVGP 417
Query: 238 KYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297
V G+ + ++ D I N G+ V V PGG++ A G DG +R++
Sbjct: 418 GGYAVVVCIGQIVLLK--DQRKCFSID-NPGYEPEVVAVH--PGGDTVAIGGVDGNVRLY 472
Query: 298 QT-GPVTNDDTETLTANGTIGKVKVTAD-------EVSRKIEGFHIAD 337
G D+ + L A G + V + D + S+ + F +AD
Sbjct: 473 SILGTTLKDEGKLLEAKGPVTDVAYSHDGAFLAVCDASKVVTVFSVAD 520
Score = 145 (56.1 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 54/229 (23%), Positives = 88/229 (38%)
Query: 100 EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR-EVDRSPGSVRTVAWLHSDQ 158
EH H V ++ + +G + LRI+D + + + E G ++ +AW +
Sbjct: 56 EHAHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSK 115
Query: 159 TILSTCTD---MGGVRLWDVRS--GEIVQTLETKSPVTSAEVSQDGRY--ITTADGSTVK 211
I G V LWD S GEI T K + S ++ Q Y T +D +
Sbjct: 116 RIAVVGEGREKFGAVFLWDSGSSVGEI--TGHNKV-INSVDIKQSRPYRLATGSDDNCAA 172
Query: 212 FWDANHFGLVKSYNMPCT-IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIAC---NK 267
F++ F + + P GN+F D + +D TG ++ +K
Sbjct: 173 FFEGPPFKFKFTIGDHSRFVNCVRFSPD-GNRFATASADGQIYIYDGKTGEKVCALGGSK 231
Query: 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANGTI 316
H G ++ + +SP S S D T +IW N T T+
Sbjct: 232 AHDGGIYAISWSPDSTHLLSASGDKTSKIWDVS--VNSVVSTFPMGSTV 278
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 178 (67.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 56/218 (25%), Positives = 101/218 (46%)
Query: 1 MDKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGH 60
MD+K + + +GHS PV +SP D +L+S+S+D + L + +T + ++GH
Sbjct: 526 MDEKTASELKILYGHSGPVYGASFSP---DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGH 582
Query: 61 KGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLT 119
VW S D A++W L F H V F +++ + T
Sbjct: 583 NYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVAT 642
Query: 120 GGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE 179
G ++ +R++D+ + R G + ++ + + + + + TD G V LWD+ G
Sbjct: 643 GSADRTVRLWDVLNGNCV-RIFTGHKGPIHSLTFSPNGRFLATGATD-GRVLLWDIGHGL 700
Query: 180 IVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWDA 215
+V L+ + V S S+DG + + +TV+ WDA
Sbjct: 701 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 738
Score = 165 (63.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 47/188 (25%), Positives = 78/188 (41%)
Query: 126 LRIFDLNRPDAPPREVDRSPGSVRTVAWLHS----------DQTILSTCTDMGGVRLWDV 175
L + D D R +D S + + HS D+ L + ++ G VRLW +
Sbjct: 511 LSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 570
Query: 176 RSGEIVQTLETKS-PVTSAEVSQDGRYITTADGSTV-KFWDANHFGLVKSY-NMPCTIES 232
++ + + + PV + S G Y + V + W +H+ ++ + +
Sbjct: 571 QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNC 630
Query: 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292
P N G D VR +D GN + GH GP+H + FSP G A+G+ DG
Sbjct: 631 TRFHPN-SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG 689
Query: 293 TIRIWQTG 300
+ +W G
Sbjct: 690 RVLLWDIG 697
Score = 152 (58.6 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 56/223 (25%), Positives = 93/223 (41%)
Query: 38 SKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLH 97
S D + + +T + GH G V+ + S+S D + ++W T L
Sbjct: 518 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 577
Query: 98 SFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156
++ H + V FS + ++GG +++ R++ + P R V + H
Sbjct: 578 GYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ-PLRIFAGHLADVNCTRF-HP 635
Query: 157 DQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWD 214
+ ++T + VRLWDV +G V+ K P+ S S +GR++ T A V WD
Sbjct: 636 NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 695
Query: 215 ANHFGLVKSYNMPCTIESASLE-PKYGNKFVAGGEDMWVRFFD 256
H GL+ T SL + G +G D VR +D
Sbjct: 696 IGH-GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 140 (54.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 48/174 (27%), Positives = 79/174 (45%)
Query: 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA 73
GH+ PV D +SP G++ +S D L + + F GH V N+
Sbjct: 581 GHNYPVWDTQFSPY---GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNS 637
Query: 74 LRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132
A+ SAD + ++WD L G+ + F HK + + +FS + L TG + + ++D+
Sbjct: 638 NYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG 697
Query: 133 RPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGGVRLWD-VRSGEIVQT 183
V G TV L D IL++ + VRLWD +++ E ++T
Sbjct: 698 HG----LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLET 747
Score = 129 (50.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 65/252 (25%), Positives = 97/252 (38%)
Query: 80 SADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR----- 133
S D ++ D T L + H V SFS D + LL+ + +R++ L
Sbjct: 518 SDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLV 577
Query: 134 ----PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTD-MGGVRLWDVRSGEIVQTLETKS 188
+ P + SP V+ H D+ TD +R++ +G +
Sbjct: 578 GYKGHNYPVWDTQFSPYGYYFVSGGH-DRVARLWATDHYQPLRIF---AGHLAD------ 627
Query: 189 PVTSAEVSQDGRYITTADGS-TVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVAG 246
V + Y+ T TV+ WD + V+ + I S + P G G
Sbjct: 628 -VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPN-GRFLATG 685
Query: 247 GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTND- 305
D V +D G + KGH V +RFS GE ASGS D T+R+W D
Sbjct: 686 ATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDL 745
Query: 306 DTETLT-ANGTI 316
+T+ T A G I
Sbjct: 746 ETDDFTTATGHI 757
WARNING: HSPs involving 833 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 349 349 0.00099 116 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1083
No. of states in DFA: 621 (66 KB)
Total size of DFA: 263 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.72u 0.14s 29.86t Elapsed: 00:00:01
Total cpu time: 29.84u 0.14s 29.98t Elapsed: 00:00:01
Start: Fri May 10 07:39:33 2013 End: Fri May 10 07:39:34 2013
WARNINGS ISSUED: 2