Query 018860
Match_columns 349
No_of_seqs 232 out of 2402
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 07:10:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018860.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018860hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.7E-48 5.6E-53 357.3 39.4 284 10-299 102-409 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 6.4E-48 2.2E-52 339.4 39.0 292 4-300 1-301 (304)
3 1got_B GT-beta; complex (GTP-b 100.0 2.1E-47 7.3E-52 341.3 41.4 283 9-298 48-340 (340)
4 3ow8_A WD repeat-containing pr 100.0 2.2E-47 7.6E-52 338.5 39.9 288 10-300 26-320 (321)
5 2pbi_B Guanine nucleotide-bind 100.0 8.7E-47 3E-51 339.3 41.8 286 8-298 56-354 (354)
6 3frx_A Guanine nucleotide-bind 100.0 2.2E-46 7.4E-51 331.9 39.7 289 6-300 7-316 (319)
7 4ery_A WD repeat-containing pr 100.0 1.6E-45 5.6E-50 324.9 43.7 289 7-300 14-311 (312)
8 3iz6_a 40S ribosomal protein R 100.0 3.4E-47 1.2E-51 345.2 32.3 289 10-302 60-376 (380)
9 4gqb_B Methylosome protein 50; 100.0 1.1E-45 3.9E-50 330.4 35.7 282 13-301 27-331 (344)
10 2xzm_R RACK1; ribosome, transl 100.0 1.9E-45 6.6E-50 329.0 36.7 289 9-300 14-339 (343)
11 4g56_B MGC81050 protein; prote 100.0 3.7E-46 1.3E-50 335.5 31.3 283 13-301 39-343 (357)
12 4aow_A Guanine nucleotide-bind 100.0 9.8E-45 3.3E-49 322.7 39.8 290 9-302 31-338 (340)
13 1nr0_A Actin interacting prote 100.0 7.9E-45 2.7E-49 349.3 39.8 288 11-303 142-569 (611)
14 1erj_A Transcriptional repress 100.0 7.7E-44 2.6E-48 324.6 39.3 281 14-301 62-389 (393)
15 3zwl_B Eukaryotic translation 100.0 4.1E-43 1.4E-47 315.1 43.3 293 4-301 20-346 (369)
16 3fm0_A Protein CIAO1; WDR39,SG 100.0 5E-44 1.7E-48 320.2 37.0 294 5-303 4-337 (345)
17 2hes_X YDR267CP; beta-propelle 100.0 9.8E-44 3.3E-48 316.3 37.0 284 9-300 7-327 (330)
18 1nr0_A Actin interacting prote 100.0 8.1E-44 2.8E-48 342.3 38.3 284 10-299 184-609 (611)
19 3dm0_A Maltose-binding peripla 100.0 3.4E-43 1.2E-47 342.8 38.5 286 11-300 377-692 (694)
20 1sq9_A Antiviral protein SKI8; 100.0 5E-43 1.7E-47 318.6 35.3 293 1-301 1-395 (397)
21 3i2n_A WD repeat-containing pr 100.0 6.8E-42 2.3E-46 306.2 33.9 292 8-302 10-354 (357)
22 3ei3_B DNA damage-binding prot 100.0 9.6E-42 3.3E-46 309.2 35.3 282 9-300 66-381 (383)
23 2ymu_A WD-40 repeat protein; u 100.0 6.2E-41 2.1E-45 319.5 41.6 277 10-298 297-577 (577)
24 1gxr_A ESG1, transducin-like e 100.0 2.1E-40 7.1E-45 294.0 39.0 282 10-299 45-335 (337)
25 2ynn_A Coatomer subunit beta'; 100.0 1E-40 3.4E-45 293.5 36.4 249 52-302 4-260 (304)
26 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-40 5.7E-45 291.8 37.3 284 7-304 9-299 (313)
27 4e54_B DNA damage-binding prot 100.0 6.8E-42 2.3E-46 315.8 29.5 286 11-302 114-431 (435)
28 2ymu_A WD-40 repeat protein; u 100.0 1.7E-39 5.7E-44 309.7 44.0 301 11-324 257-560 (577)
29 2pm7_B Protein transport prote 100.0 2E-40 6.7E-45 290.6 33.9 246 10-300 3-284 (297)
30 2pm9_A Protein WEB1, protein t 100.0 4.7E-41 1.6E-45 307.3 29.4 285 15-303 11-339 (416)
31 4a11_B DNA excision repair pro 100.0 1.2E-39 4E-44 296.7 38.0 293 9-304 36-368 (408)
32 1k8k_C P40, ARP2/3 complex 41 100.0 3.2E-40 1.1E-44 297.1 33.7 284 11-300 3-360 (372)
33 1r5m_A SIR4-interacting protei 100.0 1.5E-39 5E-44 297.5 38.3 285 10-300 39-424 (425)
34 4gga_A P55CDC, cell division c 100.0 4.4E-39 1.5E-43 295.6 40.2 277 18-303 107-397 (420)
35 4aez_A CDC20, WD repeat-contai 100.0 5.9E-39 2E-43 292.9 39.2 284 13-303 88-382 (401)
36 3k26_A Polycomb protein EED; W 100.0 7.1E-40 2.4E-44 293.9 32.3 288 10-300 12-365 (366)
37 2pm9_A Protein WEB1, protein t 100.0 5.7E-41 1.9E-45 306.7 25.5 284 13-300 64-413 (416)
38 4gqb_B Methylosome protein 50; 100.0 1.4E-39 4.7E-44 291.0 33.7 244 14-261 80-333 (344)
39 4ggc_A P55CDC, cell division c 100.0 1.7E-38 5.7E-43 279.8 39.8 276 18-302 27-316 (318)
40 1vyh_C Platelet-activating fac 100.0 4.3E-39 1.5E-43 294.8 37.4 267 53-323 100-390 (410)
41 3gre_A Serine/threonine-protei 100.0 4.6E-40 1.6E-44 303.3 30.5 279 13-298 60-437 (437)
42 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-40 3.6E-45 313.1 26.3 286 15-302 132-518 (524)
43 3dwl_C Actin-related protein 2 100.0 7.3E-41 2.5E-45 302.5 24.2 285 9-299 4-377 (377)
44 3bg1_A Protein SEC13 homolog; 100.0 2.3E-40 8E-45 292.7 25.5 253 8-300 5-292 (316)
45 3dw8_B Serine/threonine-protei 100.0 1.1E-39 3.9E-44 301.0 30.8 280 14-299 26-444 (447)
46 1got_B GT-beta; complex (GTP-b 100.0 3.9E-38 1.3E-42 281.3 38.9 269 51-324 45-323 (340)
47 3mkq_A Coatomer beta'-subunit; 100.0 9E-39 3.1E-43 316.5 38.2 293 5-301 2-302 (814)
48 3sfz_A APAF-1, apoptotic pepti 100.0 1.4E-38 4.7E-43 328.7 40.2 286 9-300 608-912 (1249)
49 3v7d_B Cell division control p 100.0 6E-38 2.1E-42 291.3 40.7 281 9-303 114-423 (464)
50 1gxr_A ESG1, transducin-like e 100.0 2.5E-38 8.6E-43 280.6 35.9 302 14-324 7-317 (337)
51 3iz6_a 40S ribosomal protein R 100.0 2.2E-39 7.4E-44 293.9 29.4 261 41-302 46-330 (380)
52 3frx_A Guanine nucleotide-bind 100.0 1.9E-38 6.7E-43 280.8 34.4 245 10-260 59-318 (319)
53 2oaj_A Protein SNI1; WD40 repe 100.0 8.1E-39 2.8E-43 319.1 34.5 205 12-222 13-247 (902)
54 3mmy_A MRNA export factor; mRN 100.0 1.5E-37 5.2E-42 278.7 38.5 286 9-300 32-345 (368)
55 3vl1_A 26S proteasome regulato 100.0 1.1E-38 3.9E-43 292.1 31.2 279 17-302 57-366 (420)
56 3ow8_A WD repeat-containing pr 100.0 4.6E-38 1.6E-42 278.6 33.7 244 9-258 73-320 (321)
57 3f3f_A Nucleoporin SEH1; struc 100.0 5.9E-38 2E-42 278.7 33.5 288 11-302 6-338 (351)
58 1p22_A F-BOX/WD-repeat protein 100.0 9.9E-38 3.4E-42 287.9 36.1 272 13-302 130-415 (435)
59 4h5i_A Guanine nucleotide-exch 100.0 2.3E-38 7.9E-43 285.5 30.6 278 16-301 14-343 (365)
60 3vl1_A 26S proteasome regulato 100.0 2.3E-37 7.7E-42 283.5 37.5 282 13-301 95-419 (420)
61 4g56_B MGC81050 protein; prote 100.0 4.9E-38 1.7E-42 282.6 32.0 246 12-261 90-345 (357)
62 1yfq_A Cell cycle arrest prote 100.0 1.3E-37 4.3E-42 277.1 33.2 276 12-299 7-322 (342)
63 2pbi_B Guanine nucleotide-bind 100.0 1.1E-36 3.9E-41 273.3 38.9 270 52-324 55-337 (354)
64 2xzm_R RACK1; ribosome, transl 100.0 1.9E-37 6.5E-42 277.2 31.9 244 10-260 70-341 (343)
65 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.9E-36 6.7E-41 279.9 38.6 275 10-301 153-442 (445)
66 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.3E-36 1.5E-40 277.6 40.7 279 5-303 107-393 (445)
67 2hes_X YDR267CP; beta-propelle 100.0 4.1E-37 1.4E-41 273.6 31.0 243 14-259 56-328 (330)
68 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.6E-36 5.4E-41 271.5 33.2 272 51-324 5-314 (345)
69 1pgu_A Actin interacting prote 100.0 2.3E-36 8E-41 289.6 35.9 307 10-325 154-596 (615)
70 1pgu_A Actin interacting prote 100.0 2.9E-36 9.9E-41 288.9 36.4 279 13-301 15-328 (615)
71 1erj_A Transcriptional repress 100.0 6.4E-36 2.2E-40 272.2 35.0 240 59-302 62-342 (393)
72 4ery_A WD repeat-containing pr 100.0 3.1E-35 1E-39 259.1 37.9 249 51-302 13-269 (312)
73 3jrp_A Fusion protein of prote 100.0 2.1E-36 7.3E-41 272.5 30.4 251 10-300 5-286 (379)
74 3sfz_A APAF-1, apoptotic pepti 100.0 4.9E-36 1.7E-40 309.7 36.4 288 10-302 651-1035(1249)
75 3v7d_B Cell division control p 100.0 4.7E-35 1.6E-39 271.8 37.3 276 10-297 156-459 (464)
76 3dm0_A Maltose-binding peripla 100.0 2E-35 6.7E-40 288.1 35.1 243 10-258 424-692 (694)
77 2oaj_A Protein SNI1; WD40 repe 100.0 6.9E-36 2.3E-40 298.0 31.4 281 15-301 97-605 (902)
78 3gre_A Serine/threonine-protei 100.0 1.4E-36 4.9E-41 279.9 24.6 268 28-303 36-361 (437)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 3.4E-36 1.1E-40 274.7 26.2 276 18-301 36-342 (402)
80 3mkq_A Coatomer beta'-subunit; 100.0 1.6E-34 5.4E-39 286.0 37.2 288 10-301 49-386 (814)
81 4gga_A P55CDC, cell division c 100.0 6.4E-34 2.2E-38 261.2 36.7 265 4-274 135-410 (420)
82 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.3E-33 4.5E-38 261.5 37.8 278 16-300 4-390 (450)
83 2xyi_A Probable histone-bindin 100.0 2E-34 6.7E-39 265.5 30.9 261 11-301 123-410 (430)
84 3i2n_A WD repeat-containing pr 100.0 6.5E-34 2.2E-38 254.3 31.8 249 54-302 11-292 (357)
85 3vu4_A KMHSV2; beta-propeller 100.0 2.2E-33 7.6E-38 252.0 35.2 277 11-302 14-337 (355)
86 3jro_A Fusion protein of prote 100.0 4.7E-35 1.6E-39 287.6 26.1 252 10-301 3-285 (753)
87 1yfq_A Cell cycle arrest prote 100.0 1.7E-34 5.9E-39 256.9 27.3 243 55-302 5-283 (342)
88 4aez_A CDC20, WD repeat-contai 100.0 1.8E-33 6.1E-38 256.7 34.6 246 14-266 132-387 (401)
89 2j04_A TAU60, YPL007P, hypothe 100.0 3.5E-35 1.2E-39 271.0 22.9 260 14-300 13-296 (588)
90 4aow_A Guanine nucleotide-bind 100.0 3.2E-33 1.1E-37 248.3 34.6 246 10-261 80-339 (340)
91 1l0q_A Surface layer protein; 100.0 1.5E-32 5.1E-37 249.2 39.7 266 32-302 3-276 (391)
92 1sq9_A Antiviral protein SKI8; 100.0 6.5E-34 2.2E-38 258.4 29.4 246 53-302 8-323 (397)
93 4gq1_A NUP37; propeller, trans 100.0 1.3E-34 4.5E-39 263.6 23.9 245 30-297 100-385 (393)
94 3ei3_B DNA damage-binding prot 100.0 1.7E-33 5.8E-38 254.9 30.4 249 49-303 61-341 (383)
95 3bws_A Protein LP49; two-domai 100.0 1.5E-32 5.2E-37 252.5 36.7 277 17-300 123-431 (433)
96 3odt_A Protein DOA1; ubiquitin 100.0 9.3E-33 3.2E-37 242.3 33.4 242 51-303 8-257 (313)
97 3dwl_C Actin-related protein 2 100.0 8.1E-35 2.8E-39 262.8 19.5 242 56-300 6-280 (377)
98 2j04_B YDR362CP, TAU91; beta p 100.0 3.3E-34 1.1E-38 269.1 23.1 225 74-301 174-428 (524)
99 3lrv_A PRE-mRNA-splicing facto 100.0 8.5E-34 2.9E-38 253.4 24.3 258 29-298 46-330 (343)
100 3k26_A Polycomb protein EED; W 100.0 2E-33 6.8E-38 251.8 26.7 245 56-304 13-321 (366)
101 1r5m_A SIR4-interacting protei 100.0 1.3E-32 4.3E-37 251.4 30.3 256 42-302 26-320 (425)
102 1k8k_C P40, ARP2/3 complex 41 100.0 1.2E-32 4.3E-37 247.5 28.9 242 57-301 4-274 (372)
103 2pm7_B Protein transport prote 100.0 1.4E-32 4.8E-37 240.7 28.3 220 55-302 3-239 (297)
104 3mmy_A MRNA export factor; mRN 100.0 4.7E-32 1.6E-36 242.9 32.1 253 47-302 25-305 (368)
105 4ggc_A P55CDC, cell division c 100.0 2.4E-31 8.1E-36 234.0 35.4 251 4-260 55-316 (318)
106 1l0q_A Surface layer protein; 100.0 6.3E-31 2.1E-35 238.5 39.0 284 12-303 28-344 (391)
107 3dw8_B Serine/threonine-protei 100.0 1.1E-32 3.8E-37 254.2 25.8 239 60-302 27-374 (447)
108 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-32 5.3E-37 253.4 26.4 257 12-290 48-350 (588)
109 3zwl_B Eukaryotic translation 100.0 2.8E-31 9.5E-36 237.9 34.1 247 10-262 68-349 (369)
110 2w18_A PALB2, fancn, partner a 100.0 9E-32 3.1E-36 234.0 29.2 253 33-299 56-355 (356)
111 4a11_B DNA excision repair pro 100.0 2.8E-31 9.4E-36 241.4 33.0 280 13-300 96-404 (408)
112 2aq5_A Coronin-1A; WD40 repeat 100.0 4.8E-32 1.6E-36 247.2 26.8 246 10-262 75-345 (402)
113 4e54_B DNA damage-binding prot 100.0 9.2E-32 3.2E-36 248.0 26.9 250 8-262 156-433 (435)
114 4h5i_A Guanine nucleotide-exch 100.0 3.4E-31 1.2E-35 238.6 28.7 243 10-259 67-343 (365)
115 3bg1_A Protein SEC13 homolog; 100.0 7.3E-32 2.5E-36 238.2 22.4 222 56-301 8-247 (316)
116 3vu4_A KMHSV2; beta-propeller 100.0 5.5E-31 1.9E-35 236.4 27.9 246 45-302 3-272 (355)
117 3bws_A Protein LP49; two-domai 100.0 3.4E-29 1.2E-33 230.1 37.4 262 38-302 96-391 (433)
118 1p22_A F-BOX/WD-repeat protein 100.0 2.8E-29 9.7E-34 231.3 32.7 231 56-301 128-365 (435)
119 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.2E-29 7.5E-34 233.1 30.9 239 13-258 99-390 (450)
120 1nir_A Nitrite reductase; hemo 100.0 8.2E-29 2.8E-33 233.9 33.6 275 24-304 145-461 (543)
121 3jrp_A Fusion protein of prote 100.0 1.8E-29 6.1E-34 227.1 26.8 208 10-218 49-288 (379)
122 3lrv_A PRE-mRNA-splicing facto 100.0 8.8E-30 3E-34 227.3 21.0 229 68-302 43-293 (343)
123 3f3f_A Nucleoporin SEH1; struc 100.0 3E-29 1E-33 222.4 22.7 221 55-301 5-249 (351)
124 2hqs_A Protein TOLB; TOLB, PAL 100.0 6.9E-28 2.4E-32 220.7 29.3 297 18-324 64-408 (415)
125 2w18_A PALB2, fancn, partner a 100.0 1.4E-28 4.8E-33 214.0 23.2 195 15-215 110-355 (356)
126 3jro_A Fusion protein of prote 100.0 6.8E-29 2.3E-33 243.8 21.6 209 9-218 46-286 (753)
127 2xyi_A Probable histone-bindin 100.0 1.3E-27 4.4E-32 220.0 28.6 210 6-218 171-411 (430)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 4E-27 1.4E-31 215.6 30.9 268 10-283 111-410 (415)
129 4gq1_A NUP37; propeller, trans 100.0 1.3E-28 4.5E-33 223.9 20.9 207 10-217 130-389 (393)
130 1nir_A Nitrite reductase; hemo 100.0 3.6E-26 1.2E-30 215.8 35.6 279 19-303 181-516 (543)
131 3u4y_A Uncharacterized protein 100.0 4.3E-25 1.5E-29 195.4 31.7 268 30-301 9-304 (331)
132 1ri6_A Putative isomerase YBHE 99.9 3.5E-24 1.2E-28 190.0 30.0 265 33-300 7-307 (343)
133 2ojh_A Uncharacterized protein 99.9 8.5E-25 2.9E-29 189.4 24.6 253 36-292 17-293 (297)
134 2ecf_A Dipeptidyl peptidase IV 99.9 8.1E-25 2.8E-29 214.6 27.3 276 16-300 36-412 (741)
135 1pby_B Quinohemoprotein amine 99.9 4.2E-24 1.4E-28 189.0 27.0 262 32-302 2-311 (337)
136 3vgz_A Uncharacterized protein 99.9 9.2E-23 3.2E-27 181.7 34.4 268 16-292 40-335 (353)
137 1xfd_A DIP, dipeptidyl aminope 99.9 3.4E-24 1.2E-28 209.5 25.4 276 18-300 18-392 (723)
138 2ecf_A Dipeptidyl peptidase IV 99.9 1.3E-23 4.4E-28 206.0 25.7 274 18-300 110-458 (741)
139 3u4y_A Uncharacterized protein 99.9 4.5E-22 1.5E-26 176.0 33.1 243 14-261 38-306 (331)
140 1ri6_A Putative isomerase YBHE 99.9 1.8E-22 6.1E-27 179.0 28.8 264 14-283 35-335 (343)
141 2z3z_A Dipeptidyl aminopeptida 99.9 8.7E-23 3E-27 199.1 27.8 276 17-302 82-436 (706)
142 1jmx_B Amine dehydrogenase; ox 99.9 2.3E-22 7.7E-27 178.8 27.8 259 29-302 9-326 (349)
143 1k32_A Tricorn protease; prote 99.9 1.7E-22 5.8E-27 205.3 28.8 280 10-301 46-409 (1045)
144 3hfq_A Uncharacterized protein 99.9 3.3E-21 1.1E-25 171.7 32.7 258 40-300 15-316 (347)
145 1k32_A Tricorn protease; prote 99.9 3.6E-22 1.2E-26 202.8 28.3 276 11-300 198-501 (1045)
146 2z3z_A Dipeptidyl aminopeptida 99.9 1.1E-21 3.8E-26 191.3 29.3 271 19-300 28-390 (706)
147 3vgz_A Uncharacterized protein 99.9 9.1E-21 3.1E-25 168.8 32.3 239 60-302 39-304 (353)
148 3o4h_A Acylamino-acid-releasin 99.9 3.7E-22 1.3E-26 190.5 22.0 233 60-299 20-274 (582)
149 3o4h_A Acylamino-acid-releasin 99.9 5.2E-22 1.8E-26 189.4 22.8 268 15-300 20-314 (582)
150 2ojh_A Uncharacterized protein 99.9 3.8E-21 1.3E-25 166.3 24.5 233 11-249 36-292 (297)
151 1z68_A Fibroblast activation p 99.9 5.2E-22 1.8E-26 194.0 21.1 272 21-300 20-390 (719)
152 1pby_B Quinohemoprotein amine 99.9 8.5E-21 2.9E-25 167.7 26.5 242 18-269 35-320 (337)
153 1xfd_A DIP, dipeptidyl aminope 99.9 3E-21 1E-25 188.7 23.8 270 12-288 53-427 (723)
154 3scy_A Hypothetical bacterial 99.9 2.8E-19 9.6E-24 160.2 34.8 267 30-300 12-336 (361)
155 3hfq_A Uncharacterized protein 99.9 9.2E-20 3.1E-24 162.4 28.5 245 14-263 37-323 (347)
156 2oit_A Nucleoporin 214KDA; NH2 99.9 1.9E-20 6.4E-25 172.1 23.2 160 14-178 90-279 (434)
157 3scy_A Hypothetical bacterial 99.9 6.6E-19 2.3E-23 157.7 32.0 259 15-279 48-360 (361)
158 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.7E-19 5.7E-24 162.2 26.5 267 33-301 4-341 (365)
159 3pe7_A Oligogalacturonate lyas 99.9 1.2E-19 3.9E-24 164.0 23.9 280 13-299 27-380 (388)
160 2oit_A Nucleoporin 214KDA; NH2 99.9 6.5E-20 2.2E-24 168.5 21.2 210 41-260 23-279 (434)
161 2oiz_A Aromatic amine dehydrog 99.8 3.8E-18 1.3E-22 153.1 27.6 266 30-302 14-335 (361)
162 1z68_A Fibroblast activation p 99.8 2.5E-19 8.6E-24 175.0 21.6 274 18-301 61-443 (719)
163 3fvz_A Peptidyl-glycine alpha- 99.8 8.1E-17 2.8E-21 142.5 34.2 236 62-300 24-321 (329)
164 4a5s_A Dipeptidyl peptidase 4 99.8 2.1E-18 7.3E-23 169.1 25.3 275 16-299 16-396 (740)
165 1jof_A Carboxy-CIS,CIS-muconat 99.8 5.5E-18 1.9E-22 152.2 25.8 242 15-260 38-342 (365)
166 2dg1_A DRP35, lactonase; beta 99.8 4E-17 1.4E-21 144.4 29.0 266 17-292 6-301 (333)
167 3azo_A Aminopeptidase; POP fam 99.8 9.4E-18 3.2E-22 162.3 26.2 281 12-298 19-364 (662)
168 3c5m_A Oligogalacturonate lyas 99.8 2.4E-18 8.2E-23 155.5 20.7 273 19-299 38-380 (396)
169 1jmx_B Amine dehydrogenase; ox 99.8 1.6E-17 5.6E-22 147.3 25.6 242 18-268 44-334 (349)
170 1q7f_A NHL, brain tumor CG1071 99.8 2.4E-16 8.1E-21 136.4 31.3 236 14-301 27-280 (286)
171 2oiz_A Aromatic amine dehydrog 99.8 1.2E-16 4.2E-21 143.2 27.8 261 12-283 47-360 (361)
172 3dsm_A Uncharacterized protein 99.8 4.5E-16 1.6E-20 137.6 27.7 255 39-300 15-301 (328)
173 3azo_A Aminopeptidase; POP fam 99.8 5.4E-17 1.9E-21 157.0 23.6 275 21-299 81-409 (662)
174 3fvz_A Peptidyl-glycine alpha- 99.8 1E-15 3.4E-20 135.4 29.5 236 16-258 23-321 (329)
175 1qks_A Cytochrome CD1 nitrite 99.8 7.1E-15 2.4E-19 138.7 34.5 272 29-302 165-478 (567)
176 2gop_A Trilobed protease; beta 99.7 1.9E-15 6.6E-20 134.2 26.5 254 17-300 15-330 (347)
177 2bkl_A Prolyl endopeptidase; m 99.7 6.6E-16 2.3E-20 150.3 24.3 270 29-302 77-398 (695)
178 3pe7_A Oligogalacturonate lyas 99.7 3.6E-16 1.2E-20 141.0 20.5 238 13-256 77-379 (388)
179 4a5s_A Dipeptidyl peptidase 4 99.7 1.9E-15 6.7E-20 148.1 26.7 283 12-300 52-448 (740)
180 3e5z_A Putative gluconolactona 99.7 1.6E-14 5.5E-19 125.5 28.8 240 13-262 24-289 (296)
181 2z2n_A Virginiamycin B lyase; 99.7 5.6E-13 1.9E-17 115.3 37.3 274 12-299 10-293 (299)
182 2xdw_A Prolyl endopeptidase; a 99.7 2E-14 6.7E-19 140.3 31.0 273 29-303 81-416 (710)
183 1qks_A Cytochrome CD1 nitrite 99.7 1.6E-13 5.5E-18 129.5 34.2 280 18-302 198-539 (567)
184 3e5z_A Putative gluconolactona 99.7 7.8E-14 2.7E-18 121.2 28.6 232 53-293 19-279 (296)
185 2dg1_A DRP35, lactonase; beta 99.7 2.8E-13 9.5E-18 119.6 32.4 233 12-249 40-300 (333)
186 2xdw_A Prolyl endopeptidase; a 99.7 5.2E-14 1.8E-18 137.3 29.6 242 14-261 122-416 (710)
187 3dsm_A Uncharacterized protein 99.7 4.9E-14 1.7E-18 124.5 26.7 240 17-267 44-309 (328)
188 2mad_H Methylamine dehydrogena 99.7 1.6E-12 5.6E-17 116.6 34.9 265 29-303 30-352 (373)
189 2gop_A Trilobed protease; beta 99.7 4.9E-14 1.7E-18 125.1 24.2 233 18-272 60-342 (347)
190 3no2_A Uncharacterized protein 99.6 1.5E-13 5.1E-18 118.3 26.4 211 72-289 4-231 (276)
191 3c5m_A Oligogalacturonate lyas 99.6 1.4E-14 4.9E-19 130.6 20.4 234 21-262 85-387 (396)
192 3sjl_D Methylamine dehydrogena 99.6 1.2E-13 3.9E-18 123.2 25.4 266 29-302 42-364 (386)
193 2bkl_A Prolyl endopeptidase; m 99.6 2.1E-14 7E-19 139.8 22.5 238 14-262 118-400 (695)
194 1rwi_B Serine/threonine-protei 99.6 4.3E-13 1.5E-17 114.5 27.6 235 63-302 25-265 (270)
195 1q7f_A NHL, brain tumor CG1071 99.6 1.5E-13 5E-18 118.7 24.8 197 14-218 74-281 (286)
196 2qc5_A Streptogramin B lactona 99.6 2.4E-11 8.1E-16 105.1 38.0 273 14-299 17-298 (300)
197 1yr2_A Prolyl oligopeptidase; 99.6 2.8E-13 9.6E-18 132.7 27.1 269 29-301 116-441 (741)
198 3no2_A Uncharacterized protein 99.6 8.4E-13 2.9E-17 113.6 26.8 189 30-225 4-203 (276)
199 1rwi_B Serine/threonine-protei 99.6 9.7E-13 3.3E-17 112.3 26.3 237 18-261 25-266 (270)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.5E-12 8.4E-17 112.3 29.0 233 62-300 18-298 (314)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 6E-12 2E-16 109.8 28.6 238 13-259 14-299 (314)
202 3sjl_D Methylamine dehydrogena 99.6 4E-12 1.4E-16 113.3 26.2 254 21-281 82-384 (386)
203 2z2n_A Virginiamycin B lyase; 99.5 7.2E-11 2.5E-15 101.9 32.9 235 58-299 11-253 (299)
204 3hrp_A Uncharacterized protein 99.5 2.3E-11 7.9E-16 110.6 30.9 231 63-299 132-408 (409)
205 1yr2_A Prolyl oligopeptidase; 99.5 7E-12 2.4E-16 122.8 26.4 242 14-262 160-444 (741)
206 2mad_H Methylamine dehydrogena 99.5 4.9E-10 1.7E-14 100.5 34.6 235 21-265 70-356 (373)
207 3hrp_A Uncharacterized protein 99.5 8.2E-11 2.8E-15 107.0 29.2 234 17-257 131-408 (409)
208 3c75_H MADH, methylamine dehyd 99.5 9.7E-12 3.3E-16 112.6 22.8 267 29-303 82-404 (426)
209 3g4e_A Regucalcin; six bladed 99.4 3.3E-10 1.1E-14 98.3 29.5 221 62-289 13-260 (297)
210 3iuj_A Prolyl endopeptidase; h 99.4 4.2E-11 1.4E-15 116.4 25.3 237 59-301 126-405 (693)
211 3iuj_A Prolyl endopeptidase; h 99.4 1.1E-10 3.6E-15 113.6 27.2 240 13-262 125-408 (693)
212 2qc5_A Streptogramin B lactona 99.4 3.6E-09 1.2E-13 91.2 33.9 232 60-299 18-258 (300)
213 3g4e_A Regucalcin; six bladed 99.4 1.7E-09 5.7E-14 93.8 30.3 223 18-247 14-261 (297)
214 1xip_A Nucleoporin NUP159; bet 99.4 1.4E-11 4.6E-16 110.2 16.7 169 63-245 39-230 (388)
215 2ghs_A AGR_C_1268P; regucalcin 99.4 1.7E-09 5.8E-14 95.2 29.2 216 64-288 51-289 (326)
216 1mda_H Methylamine dehydrogena 99.4 3.5E-11 1.2E-15 107.2 18.3 254 33-302 34-347 (368)
217 1xip_A Nucleoporin NUP159; bet 99.3 3.3E-11 1.1E-15 107.7 16.9 171 104-287 39-230 (388)
218 3dr2_A Exported gluconolactona 99.3 1.2E-09 4.2E-14 95.1 25.6 233 53-296 36-302 (305)
219 3c75_H MADH, methylamine dehyd 99.3 9.5E-10 3.3E-14 99.6 25.2 238 21-266 122-409 (426)
220 3q7m_A Lipoprotein YFGL, BAMB; 99.3 4.1E-09 1.4E-13 94.5 27.9 258 31-302 53-338 (376)
221 2ghs_A AGR_C_1268P; regucalcin 99.3 1.3E-08 4.5E-13 89.5 30.1 221 19-248 51-292 (326)
222 3dr2_A Exported gluconolactona 99.3 3.7E-09 1.3E-13 92.0 26.3 229 15-256 43-303 (305)
223 3q7m_A Lipoprotein YFGL, BAMB; 99.3 3.6E-09 1.2E-13 94.8 26.7 256 31-298 103-375 (376)
224 2qe8_A Uncharacterized protein 99.3 7.2E-10 2.5E-14 98.3 21.1 236 62-299 17-319 (343)
225 1kb0_A Quinohemoprotein alcoho 99.3 2.6E-09 8.9E-14 103.2 25.8 255 31-286 128-535 (677)
226 1mda_H Methylamine dehydrogena 99.2 8.2E-10 2.8E-14 98.4 20.1 244 21-280 69-366 (368)
227 1yiq_A Quinohemoprotein alcoho 99.2 1.2E-08 4E-13 98.8 28.0 252 31-285 121-532 (689)
228 1npe_A Nidogen, entactin; glyc 99.2 5E-07 1.7E-11 76.8 32.8 246 33-283 3-263 (267)
229 2hz6_A Endoplasmic reticulum t 99.2 3.8E-11 1.3E-15 107.7 6.8 255 30-300 8-278 (369)
230 1fwx_A Nitrous oxide reductase 99.1 1.1E-09 3.7E-14 101.8 16.2 251 21-293 91-413 (595)
231 3hxj_A Pyrrolo-quinoline quino 99.1 8E-09 2.7E-13 90.5 20.8 251 30-300 70-323 (330)
232 1yiq_A Quinohemoprotein alcoho 99.1 1.1E-08 3.7E-13 99.1 22.7 266 31-302 70-506 (689)
233 1kb0_A Quinohemoprotein alcoho 99.1 1E-08 3.5E-13 99.1 22.0 266 32-302 78-508 (677)
234 2iwa_A Glutamine cyclotransfer 99.1 7.4E-08 2.5E-12 81.3 24.3 202 94-301 10-237 (266)
235 2hz6_A Endoplasmic reticulum t 99.1 4.8E-11 1.6E-15 107.0 4.8 204 72-283 8-216 (369)
236 2qe8_A Uncharacterized protein 99.0 5.5E-08 1.9E-12 86.1 21.2 230 17-252 17-314 (343)
237 3nol_A Glutamine cyclotransfer 99.0 1.2E-07 4.3E-12 79.1 20.9 189 94-289 32-243 (262)
238 2iwa_A Glutamine cyclotransfer 99.0 2.1E-07 7.3E-12 78.5 21.7 201 52-260 10-238 (266)
239 2ece_A 462AA long hypothetical 99.0 3E-07 1E-11 82.8 23.8 215 29-247 93-399 (462)
240 3nok_A Glutaminyl cyclase; bet 99.0 2.6E-07 8.8E-12 77.3 21.3 187 94-288 44-253 (268)
241 2ece_A 462AA long hypothetical 98.9 2.7E-06 9.3E-11 76.6 27.5 217 71-289 93-399 (462)
242 3hxj_A Pyrrolo-quinoline quino 98.9 5.6E-08 1.9E-12 85.0 16.6 250 30-299 30-282 (330)
243 1npe_A Nidogen, entactin; glyc 98.9 9.5E-06 3.2E-10 68.7 29.4 204 18-226 37-247 (267)
244 2ad6_A Methanol dehydrogenase 98.9 1.5E-06 5.3E-11 82.1 26.1 253 31-286 115-522 (571)
245 2p4o_A Hypothetical protein; p 98.9 1.1E-05 3.9E-10 69.8 29.5 231 53-292 24-279 (306)
246 3mbr_X Glutamine cyclotransfer 98.8 2.8E-06 9.6E-11 70.3 23.8 189 94-289 10-222 (243)
247 3nol_A Glutamine cyclotransfer 98.8 1.1E-06 3.8E-11 73.4 21.2 179 18-205 44-243 (262)
248 4a2l_A BT_4663, two-component 98.8 4.7E-05 1.6E-09 75.0 36.4 270 19-300 175-479 (795)
249 1kv9_A Type II quinohemoprotei 98.8 4.1E-06 1.4E-10 80.8 27.9 255 31-287 117-518 (668)
250 1kv9_A Type II quinohemoprotei 98.8 4.9E-07 1.7E-11 87.2 21.0 266 32-302 67-489 (668)
251 2fp8_A Strictosidine synthase; 98.8 7.8E-06 2.7E-10 71.4 26.6 230 64-300 21-312 (322)
252 4a2l_A BT_4663, two-component 98.8 0.00012 4.2E-09 72.0 37.8 268 16-299 214-524 (795)
253 3nok_A Glutaminyl cyclase; bet 98.7 2.2E-06 7.5E-11 71.7 19.5 178 17-205 55-253 (268)
254 2ad6_A Methanol dehydrogenase 98.7 6.1E-06 2.1E-10 78.0 24.4 264 33-302 64-495 (571)
255 1w6s_A Methanol dehydrogenase 98.7 1.4E-05 4.9E-10 75.7 26.2 250 34-287 124-533 (599)
256 3mbr_X Glutamine cyclotransfer 98.7 1.1E-05 3.8E-10 66.7 22.3 180 17-205 21-222 (243)
257 1flg_A Protein (quinoprotein e 98.7 2.9E-05 1E-09 73.5 28.0 255 31-287 117-546 (582)
258 2fp8_A Strictosidine synthase; 98.7 3.4E-05 1.2E-09 67.2 26.4 234 12-258 14-312 (322)
259 3v9f_A Two-component system se 98.6 0.00046 1.6E-08 67.8 35.4 272 17-300 258-567 (781)
260 1k3i_A Galactose oxidase precu 98.5 2.4E-05 8.1E-10 75.4 24.2 233 66-300 190-496 (656)
261 1w6s_A Methanol dehydrogenase 98.5 0.0001 3.5E-09 69.8 26.8 266 32-302 63-504 (599)
262 1k3i_A Galactose oxidase precu 98.5 6.5E-06 2.2E-10 79.3 19.0 257 30-290 197-530 (656)
263 3v9f_A Two-component system se 98.5 0.00083 2.8E-08 66.0 34.2 271 17-300 211-523 (781)
264 2xe4_A Oligopeptidase B; hydro 98.5 4.2E-05 1.4E-09 74.9 24.6 241 14-262 170-461 (751)
265 3tc9_A Hypothetical hydrolase; 98.5 0.00013 4.6E-09 66.3 25.8 233 65-299 140-428 (430)
266 3v65_B Low-density lipoprotein 98.4 0.00078 2.7E-08 60.3 30.1 241 33-278 89-337 (386)
267 1fwx_A Nitrous oxide reductase 98.4 1.8E-05 6.3E-10 73.7 19.3 187 113-301 100-361 (595)
268 3v65_B Low-density lipoprotein 98.4 0.00079 2.7E-08 60.3 31.3 231 65-299 80-316 (386)
269 3v64_C Agrin; beta propeller, 98.4 0.00073 2.5E-08 59.6 31.1 231 64-298 36-272 (349)
270 4hw6_A Hypothetical protein, I 98.4 0.00029 9.9E-09 64.1 27.0 232 64-299 141-431 (433)
271 2p4o_A Hypothetical protein; p 98.4 0.00049 1.7E-08 59.4 27.4 211 18-236 33-263 (306)
272 2xbg_A YCF48-like protein; pho 98.4 0.00079 2.7E-08 58.8 31.1 268 16-299 35-320 (327)
273 1flg_A Protein (quinoprotein e 98.4 0.00027 9.2E-09 66.9 25.4 267 30-302 68-517 (582)
274 3v64_C Agrin; beta propeller, 98.3 0.0019 6.4E-08 56.9 32.6 230 33-267 46-283 (349)
275 4hw6_A Hypothetical protein, I 98.2 0.001 3.5E-08 60.5 25.7 238 17-257 139-431 (433)
276 3tc9_A Hypothetical hydrolase; 98.2 0.0016 5.4E-08 59.2 25.9 236 18-257 138-428 (430)
277 3kya_A Putative phosphatase; s 98.2 0.0032 1.1E-07 57.9 27.1 236 64-302 141-476 (496)
278 3p5b_L Low density lipoprotein 98.1 0.004 1.4E-07 55.9 32.1 218 81-299 90-318 (400)
279 3sov_A LRP-6, low-density lipo 98.1 0.0034 1.2E-07 54.5 29.8 218 82-300 12-237 (318)
280 3qqz_A Putative uncharacterize 98.1 0.0026 8.9E-08 53.2 27.2 199 12-214 22-250 (255)
281 1ijq_A LDL receptor, low-densi 98.1 0.004 1.4E-07 54.0 32.1 229 33-267 3-246 (316)
282 3p5b_L Low density lipoprotein 98.1 0.0053 1.8E-07 55.1 32.8 240 33-277 85-338 (400)
283 3m0c_C LDL receptor, low-densi 98.1 0.01 3.5E-07 58.1 31.8 229 33-266 397-639 (791)
284 2xbg_A YCF48-like protein; pho 98.1 0.005 1.7E-07 53.6 25.7 227 16-257 79-320 (327)
285 2xe4_A Oligopeptidase B; hydro 98.0 0.00032 1.1E-08 68.6 19.2 192 63-257 175-398 (751)
286 1ijq_A LDL receptor, low-densi 98.0 0.0054 1.9E-07 53.1 31.8 217 83-300 10-237 (316)
287 3m0c_C LDL receptor, low-densi 98.0 0.014 4.7E-07 57.1 30.9 217 81-298 402-629 (791)
288 3amr_A 3-phytase; beta-propell 98.0 0.0032 1.1E-07 54.9 22.4 192 73-266 40-271 (355)
289 3sov_A LRP-6, low-density lipo 97.9 0.01 3.5E-07 51.4 29.1 223 41-267 13-246 (318)
290 4a0p_A LRP6, LRP-6, low-densit 97.8 0.027 9.3E-07 53.6 32.9 226 33-262 8-240 (628)
291 1n7d_A LDL receptor, low-densi 97.7 0.00093 3.2E-08 64.7 15.7 217 82-299 385-612 (699)
292 3amr_A 3-phytase; beta-propell 97.7 0.025 8.4E-07 49.3 23.0 198 21-224 30-271 (355)
293 3qqz_A Putative uncharacterize 97.6 0.025 8.7E-07 47.1 29.1 198 56-257 21-251 (255)
294 2vpj_A Kelch-like protein 12; 97.5 0.014 4.9E-07 49.7 19.8 227 30-262 14-281 (301)
295 3s94_A LRP-6, low-density lipo 97.5 0.064 2.2E-06 51.0 26.9 217 82-299 17-241 (619)
296 2p9w_A MAL S 1 allergenic prot 97.5 0.029 1E-06 48.4 20.5 151 149-300 16-214 (334)
297 2ism_A Putative oxidoreductase 97.5 0.036 1.2E-06 48.7 21.7 219 64-288 33-332 (352)
298 1n7d_A LDL receptor, low-densi 97.5 0.0017 5.7E-08 62.9 14.0 204 19-225 408-622 (699)
299 3kya_A Putative phosphatase; s 97.4 0.014 4.6E-07 53.7 18.2 150 147-299 140-339 (496)
300 2vpj_A Kelch-like protein 12; 97.3 0.048 1.6E-06 46.4 20.4 211 84-300 32-277 (301)
301 3ii7_A Kelch-like protein 7; p 97.2 0.048 1.6E-06 46.6 19.4 220 32-262 13-275 (306)
302 2xn4_A Kelch-like protein 2; s 97.2 0.039 1.3E-06 47.0 18.6 222 31-262 16-279 (302)
303 3s94_A LRP-6, low-density lipo 97.2 0.16 5.6E-06 48.2 32.0 156 18-176 41-201 (619)
304 2p9w_A MAL S 1 allergenic prot 97.2 0.061 2.1E-06 46.4 18.9 162 11-177 7-215 (334)
305 4a0p_A LRP6, LRP-6, low-densit 97.2 0.18 6.1E-06 48.0 37.9 157 17-177 37-197 (628)
306 1zgk_A Kelch-like ECH-associat 97.0 0.067 2.3E-06 45.8 18.1 223 30-261 24-289 (308)
307 2xn4_A Kelch-like protein 2; s 97.0 0.13 4.4E-06 43.7 20.0 181 113-300 61-275 (302)
308 3ii7_A Kelch-like protein 7; p 97.0 0.14 4.9E-06 43.6 19.6 216 75-300 14-271 (306)
309 3ei3_A DNA damage-binding prot 96.9 0.47 1.6E-05 48.5 32.1 266 19-289 461-755 (1158)
310 2g8s_A Glucose/sorbosone dehyd 96.9 0.19 6.5E-06 44.0 20.8 223 63-287 19-339 (353)
311 2xzh_A Clathrin heavy chain 1; 96.8 0.22 7.6E-06 42.8 30.9 249 42-299 50-330 (365)
312 4asc_A Kelch repeat and BTB do 96.7 0.27 9.1E-06 42.1 20.7 207 34-249 8-253 (315)
313 3pbp_A Nucleoporin NUP82; beta 96.6 0.21 7.3E-06 44.6 18.1 129 168-296 41-207 (452)
314 1bpo_A Protein (clathrin); cla 96.5 0.42 1.4E-05 42.8 30.6 251 42-300 49-330 (494)
315 2woz_A Kelch repeat and BTB do 96.4 0.38 1.3E-05 41.2 19.2 219 33-262 18-290 (318)
316 1zgk_A Kelch-like ECH-associat 96.4 0.35 1.2E-05 41.2 18.1 173 113-292 70-273 (308)
317 1xi4_A Clathrin heavy chain; a 96.1 1.1 3.8E-05 46.3 21.6 271 21-299 24-329 (1630)
318 3ei3_A DNA damage-binding prot 96.0 1.6 5.6E-05 44.6 34.6 201 33-239 525-748 (1158)
319 3sre_A PON1, serum paraoxonase 96.0 0.72 2.5E-05 40.3 20.9 189 64-256 52-295 (355)
320 2ism_A Putative oxidoreductase 95.9 0.77 2.6E-05 40.1 25.7 97 19-121 33-153 (352)
321 3a9g_A Putative uncharacterize 95.9 0.78 2.7E-05 40.1 25.9 224 63-289 30-330 (354)
322 2uvk_A YJHT; unknown function, 95.9 0.47 1.6E-05 41.2 16.7 91 30-123 19-128 (357)
323 2be1_A Serine/threonine-protei 95.9 0.034 1.2E-06 48.4 8.9 106 31-136 10-133 (339)
324 3sre_A PON1, serum paraoxonase 95.8 0.86 3E-05 39.8 21.0 176 122-300 81-297 (355)
325 4asc_A Kelch repeat and BTB do 95.8 0.77 2.6E-05 39.1 20.3 206 76-291 8-253 (315)
326 2woz_A Kelch repeat and BTB do 95.2 1.3 4.4E-05 37.7 21.1 201 84-291 25-263 (318)
327 3das_A Putative oxidoreductase 95.1 1.5 5.2E-05 38.1 27.4 228 62-292 32-330 (347)
328 3pbp_A Nucleoporin NUP82; beta 95.1 1.8 6.2E-05 38.7 18.8 102 30-133 31-158 (452)
329 2uvk_A YJHT; unknown function, 94.9 0.69 2.4E-05 40.2 14.1 16 168-183 168-183 (357)
330 1tl2_A L10, protein (tachylect 94.8 1.3 4.5E-05 35.8 15.0 104 188-297 41-159 (236)
331 2zwa_A Leucine carboxyl methyl 94.3 3.2 0.00011 39.9 18.4 191 30-220 397-638 (695)
332 3sbq_A Nitrous-oxide reductase 93.7 0.42 1.4E-05 44.2 10.0 125 169-294 299-461 (638)
333 3a9g_A Putative uncharacterize 93.7 3.3 0.00011 36.1 27.1 99 18-121 30-153 (354)
334 1cru_A Protein (soluble quinop 93.2 4.7 0.00016 36.5 23.9 51 63-113 28-87 (454)
335 1tl2_A L10, protein (tachylect 92.9 3.1 0.00011 33.6 13.0 138 63-208 42-201 (236)
336 2xzh_A Clathrin heavy chain 1; 92.6 4.6 0.00016 34.8 26.0 191 30-226 77-299 (365)
337 2zwa_A Leucine carboxyl methyl 92.2 8.4 0.00029 37.0 19.2 189 71-263 396-639 (695)
338 1cru_A Protein (soluble quinop 92.1 6.7 0.00023 35.5 20.1 101 18-122 28-163 (454)
339 1bpo_A Protein (clathrin); cla 91.6 7.3 0.00025 35.0 27.5 191 30-226 76-298 (494)
340 1xi4_A Clathrin heavy chain; a 90.5 19 0.00064 37.7 19.0 187 31-223 77-295 (1630)
341 3ott_A Two-component system se 90.5 13 0.00045 35.8 31.5 264 19-300 193-501 (758)
342 3ott_A Two-component system se 89.2 16 0.00056 35.2 32.7 264 17-298 63-349 (758)
343 3sbq_A Nitrous-oxide reductase 87.0 5.3 0.00018 37.1 10.6 108 97-205 317-452 (638)
344 4gq2_M Nucleoporin NUP120; bet 86.4 7.3 0.00025 39.0 12.4 38 63-100 237-274 (950)
345 2be1_A Serine/threonine-protei 86.3 2.3 8E-05 36.8 7.8 108 160-267 12-138 (339)
346 2g8s_A Glucose/sorbosone dehyd 86.2 16 0.00054 31.6 26.3 141 19-163 20-214 (353)
347 3qhy_B Beta-lactamase inhibito 79.6 26 0.00087 29.2 17.1 217 63-299 25-244 (282)
348 4fhn_B Nucleoporin NUP120; pro 67.7 4.2 0.00014 41.6 4.3 37 64-100 240-276 (1139)
349 3f7f_A Nucleoporin NUP120; nuc 66.4 9.6 0.00033 36.5 6.1 35 64-100 224-258 (729)
350 4gq2_M Nucleoporin NUP120; bet 56.1 16 0.00054 36.6 5.9 38 18-58 237-274 (950)
351 4hvt_A Ritya.17583.B, post-pro 54.8 1.5E+02 0.0052 28.4 23.1 227 29-258 139-429 (711)
352 3s25_A Hypothetical 7-bladed b 54.0 97 0.0033 25.9 20.3 136 152-300 110-254 (302)
353 3f7f_A Nucleoporin NUP120; nuc 51.9 22 0.00075 34.1 5.7 37 18-59 223-259 (729)
354 3das_A Putative oxidoreductase 50.8 1.2E+02 0.0041 26.1 27.3 102 17-121 32-158 (347)
355 4fhn_B Nucleoporin NUP120; pro 48.1 17 0.00059 37.1 4.8 29 30-58 248-276 (1139)
356 3b7f_A Glycosyl hydrolase, BNR 46.0 1.4E+02 0.0049 25.6 27.5 92 33-127 24-141 (394)
357 3q6k_A 43.2 kDa salivary prote 44.1 1.6E+02 0.0056 25.7 22.5 135 42-177 124-306 (381)
358 4a9v_A PHOX; hydrolase, beta-p 41.5 1.2E+02 0.004 28.3 8.7 57 65-121 479-549 (592)
359 3zwu_A Alkaline phosphatase PH 40.1 1.3E+02 0.0044 28.1 9.0 55 66-120 480-548 (592)
360 4hvt_A Ritya.17583.B, post-pro 39.3 2.6E+02 0.009 26.7 17.5 229 68-300 136-429 (711)
361 3qhy_B Beta-lactamase inhibito 37.1 1.7E+02 0.0059 24.0 18.1 9 82-90 119-127 (282)
362 3zwu_A Alkaline phosphatase PH 36.3 1.2E+02 0.0043 28.2 8.2 55 21-78 480-547 (592)
363 3uc1_A DNA gyrase subunit A; D 33.6 2.2E+02 0.0075 24.1 18.1 102 30-132 108-227 (327)
364 3s25_A Hypothetical 7-bladed b 32.5 2.2E+02 0.0074 23.7 27.2 207 68-295 59-287 (302)
365 1sqj_A OXG-RCBH, oligoxylogluc 31.5 3.6E+02 0.012 26.0 24.0 145 16-164 14-188 (789)
366 1q47_A Semaphorin 3A; beta pro 28.0 1.5E+02 0.0052 26.9 7.2 55 242-296 423-487 (495)
367 3q6k_A 43.2 kDa salivary prote 26.3 3.2E+02 0.011 23.7 20.9 133 169-301 124-306 (381)
368 2cn3_A Xyloglucanase, beta-1,4 25.7 4.4E+02 0.015 25.1 23.2 102 18-121 24-151 (737)
369 3b7f_A Glycosyl hydrolase, BNR 23.2 3.5E+02 0.012 23.1 29.0 61 63-124 116-199 (394)
370 3nvq_A Semaphorin-7A; beta-pro 22.5 2.6E+02 0.0088 26.1 7.7 56 242-297 382-445 (590)
371 1suu_A DNA gyrase subunit A; t 22.4 3.4E+02 0.012 22.6 24.9 184 72-258 7-230 (312)
372 4a9v_A PHOX; hydrolase, beta-p 21.8 4.9E+02 0.017 24.2 9.3 58 147-204 477-547 (592)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-48 Score=357.33 Aligned_cols=284 Identities=21% Similarity=0.372 Sum_probs=253.7
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
..+.||.++|++++|+| ++.+|++|+.|++|++|+..++++++++++|...|.+++|++++.+|+||+.|++|++||
T Consensus 102 ~~l~gh~~~V~~~~~~p---~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHP---VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp CEEECCSSCEEEEEECS---SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred EeecccCCcEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 45789999999999997 889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 018860 90 ALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMG 168 (349)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 168 (349)
+.+++++..+. |...|.+++|+|++++|++|+.|++|++||+.+.. ....+.+|...+.++.|.+ ++.++++++.|+
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~ 256 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQ 256 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc-EEEEEeCCCccEEEEEECC-CCCEEEEEcCCC
Confidence 99999988875 88899999999999999999999999999997643 3456678888999999876 456777888889
Q ss_pred eEEEEECCCCceEEeecC-CCCeeEEEEcCC--------------------CcEE-EEecCCeEEEEecCCceeeEEEc-
Q 018860 169 GVRLWDVRSGEIVQTLET-KSPVTSAEVSQD--------------------GRYI-TTADGSTVKFWDANHFGLVKSYN- 225 (349)
Q Consensus 169 ~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~--------------------~~~l-~~~~d~~i~iwd~~~~~~~~~~~- 225 (349)
+|++||++++++...+.. ...+.++.|+|+ +.++ +++.|++|++||++++.++..+.
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 336 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence 999999999998887754 567999999986 4455 55679999999999998887765
Q ss_pred CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 226 MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
+...+..++|+|. ++++++|+.|+.|++||+.+++.+..+.+|...|++++|+|++++|+|||.||+|++|+.
T Consensus 337 h~~~v~~v~~~~~-g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 337 HDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CSSCEEEEEECSS-SSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCCcEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 4456788999884 889999999999999999999999999999999999999999999999999999999985
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.4e-48 Score=339.39 Aligned_cols=292 Identities=18% Similarity=0.241 Sum_probs=254.8
Q ss_pred cccccceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCC
Q 018860 4 KKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADF 83 (349)
Q Consensus 4 ~~~~~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 83 (349)
|++....+|.+|.+.|.+++|+| ++++|++|+.|+++++|+..++..++.+.+|..+|.+++|++++++|++|+.|+
T Consensus 1 ~~l~~~~~~~~h~~~V~~~~fsp---~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 1 MKLDIKKTFSNRSDRVKGIDFHP---TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp -CCCCEEEEEEECSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred CcceeEEeecCCCCceEEEEECC---CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC
Confidence 35667778999999999999997 899999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEE
Q 018860 84 SAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILS 162 (349)
Q Consensus 84 ~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 162 (349)
+|++||+.+++.+..+. |...|++++|+|++.+|++|+.|++|++||+.........+.+|...|.+++|+|.++.+++
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEE
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEE
Confidence 99999999999888775 88999999999999999999999999999997654444567789999999999998888888
Q ss_pred EeeCCCeEEEEECCCCceEEeec--CCCCeeEEEEcC--CCcEE-EEecCCeEEEEecCCceeeEEEcC-CCceEEeeec
Q 018860 163 TCTDMGGVRLWDVRSGEIVQTLE--TKSPVTSAEVSQ--DGRYI-TTADGSTVKFWDANHFGLVKSYNM-PCTIESASLE 236 (349)
Q Consensus 163 ~~~~dg~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l-~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~ 236 (349)
+++.|++|++||++++.....+. +...+..+.++| ++.++ +++.|++|++||+++..++..+.. ...+..++|+
T Consensus 158 sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~ 237 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH 237 (304)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC
T ss_pred EEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEEC
Confidence 99999999999998877655553 235688888876 55555 556799999999999988887764 4567788899
Q ss_pred CCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCC--eEEEecCCCCEEEecCC
Q 018860 237 PKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE--SYASGSEDGTIRIWQTG 300 (349)
Q Consensus 237 ~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~--~l~sgs~Dg~v~vW~~~ 300 (349)
|. +..|++|+.|++|++||+.+++.+..+..|...+++++|+|++. ++++|+.|| +.+|+++
T Consensus 238 p~-~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~ 301 (304)
T 2ynn_A 238 PT-LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLG 301 (304)
T ss_dssp SS-SSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC
T ss_pred CC-CCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEec
Confidence 85 78999999999999999999999999999999999999999875 578877666 6677654
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.1e-47 Score=341.34 Aligned_cols=283 Identities=20% Similarity=0.365 Sum_probs=250.0
Q ss_pred ceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEE
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW 88 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vW 88 (349)
..++.||.++|.++.|+| ++++|++|+.|+++++|+..+++.+..+..|...|.+++|+|++.+|++|+.|+.|++|
T Consensus 48 ~~~l~gH~~~v~~~~~s~---d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGT---DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp EEEECCCSSCEEEEEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred heeecCCCCceEEEEECC---CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 456789999999999997 89999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCC----EEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 89 DALTGD----VLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 89 d~~~~~----~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
++.+++ ....+ .|...|.++.|++++. +++++.|++|++||+.+.. ....+.+|.+.|.+++|+|.+ .++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~~~~~-~~l~s 201 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ-QTTTFTGHTGDVMSLSLAPDT-RLFVS 201 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTS-SEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCc-EEEEEcCCCCceEEEEECCCC-CEEEE
Confidence 998763 23333 4888999999998875 8899999999999997643 334567888999999998754 56778
Q ss_pred eeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCC---CceEEeeecCC
Q 018860 164 CTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMP---CTIESASLEPK 238 (349)
Q Consensus 164 ~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~ 238 (349)
++.|++|++||++++++...+.. ...+.+++|+|++.++++ +.|++|++||++....+..+..+ ..+..++|+|.
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 88889999999999998888864 567999999999987755 56999999999998887777554 35788999985
Q ss_pred CCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 239 YGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 239 ~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
++++++|+.|+.|++||+.+++.+..+.+|.++|.+++|+|++.+|+|||.||+|+|||
T Consensus 282 -g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 -GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp -SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 89999999999999999999999999999999999999999999999999999999996
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-47 Score=338.55 Aligned_cols=288 Identities=20% Similarity=0.293 Sum_probs=248.7
Q ss_pred eeeccCCCceeeEEEeecC-CCccEEEEEecCCCeEEEeCCCCC--eEEEeecccCCeEEEEECCCCCeeEEeeCCCeEE
Q 018860 10 LVCHGHSRPVVDLFYSPIT-PDGFFLISASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~-~~~~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 86 (349)
..+.+|.++|.+|+|+|.. +++.+|++||.|+++++|+..+.. ...++++|...|.+++|++++.+++|++.|++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIR 105 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 4457999999999999743 357899999999999999987664 4567899999999999999999999999999999
Q ss_pred EEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEee
Q 018860 87 VWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT 165 (349)
Q Consensus 87 vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 165 (349)
+||+.+++.+..+. +...+.+++|+|++++|++|+.|+.|++|++..... ...+..+...+.+++|+|++ .++++++
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~-~~~~~~~~~~v~~~~~spdg-~~lasg~ 183 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-EYSLDTRGKFILSIAYSPDG-KYLASGA 183 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE-EEEEECSSSCEEEEEECTTS-SEEEEEE
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce-eEEecCCCceEEEEEECCCC-CEEEEEc
Confidence 99999999888775 667789999999999999999999999999976443 34456677789999998755 5666778
Q ss_pred CCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcC-CCceEEeeecCCCCCE
Q 018860 166 DMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNK 242 (349)
Q Consensus 166 ~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 242 (349)
.||.|++||+++++.+..+.. ..++.+++|+|++++|++ +.|++|++||+++..+...+.. ...+..++|+|. +.+
T Consensus 184 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~-~~~ 262 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD-DTH 262 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSE
T ss_pred CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCC-CCE
Confidence 889999999999999888875 457999999999988765 5689999999998888777653 456788999985 889
Q ss_pred EEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 243 FVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 243 ~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
|++++.|++|++||+.+++.+..+.+|.+.|++++|+|++++|++++.||+|++||.+
T Consensus 263 l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 263 FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999963
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=8.7e-47 Score=339.28 Aligned_cols=286 Identities=22% Similarity=0.301 Sum_probs=251.6
Q ss_pred cceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEE
Q 018860 8 VPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87 (349)
Q Consensus 8 ~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~v 87 (349)
...++.||.++|++++|+| ++++|+|||.|+++++|+..+++....+..|...|.+++|+|++.+|++|+.|+.+++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~---d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCK---DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp EEEEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred EEEEecCCCCeEEEEEECC---CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 3456789999999999997 8999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCC------EEE-EeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecC-CCe
Q 018860 88 WDALTGD------VLH-SFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS-DQT 159 (349)
Q Consensus 88 Wd~~~~~------~~~-~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~ 159 (349)
|++.... ... ...|...|.+++|+|++..|++++.|++|++||+.+.. ....+.+|...+.++.|.|. ++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ-LLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEcCCCCCeEEEEEEeCCCCC
Confidence 9986431 122 23488999999999999999999999999999997643 34567788899999999875 457
Q ss_pred EEEEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCC---CceEEee
Q 018860 160 ILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMP---CTIESAS 234 (349)
Q Consensus 160 ~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~ 234 (349)
++++++.||+|++||+++++++..+.. ...+.+++|+|++.++++ +.|++|++||++....+..+... ..+..++
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD 291 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE
Confidence 888889999999999999999888864 568999999999987655 56999999999988777666543 2467888
Q ss_pred ecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 235 LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 235 ~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
|+|. +.++++|+.|+.|++||+.+++.+..+.+|.++|++++|+|++++|+|||.||+|++|+
T Consensus 292 ~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 292 FSLS-GRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTT-SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EeCC-CCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 8884 88999999999999999999999999999999999999999999999999999999996
No 6
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.2e-46 Score=331.92 Aligned_cols=289 Identities=19% Similarity=0.304 Sum_probs=247.7
Q ss_pred cccceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC-----CCeEEEeecccCCeEEEEECCCCCeeEEee
Q 018860 6 IAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET-----GDWIGTFEGHKGAVWSCCLDTNALRAASAS 80 (349)
Q Consensus 6 ~~~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 80 (349)
+...-+|.||.++|.+++|+|. ++++|++||.|+++++|+... +..++.+++|...|.+++|++++.+|+||+
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~--~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAG--QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSS--CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEEccccceEEEEEccCC--CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 4555677899999999999972 347999999999999998653 345788999999999999999999999999
Q ss_pred CCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecC---
Q 018860 81 ADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS--- 156 (349)
Q Consensus 81 ~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~--- 156 (349)
.|++||+||+.+++.+..+. |...|.+++|+|++.+|++|+.|++|++||+.. .....+.+|...+.++.|.|.
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECCC---
T ss_pred CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEccCCCC
Confidence 99999999999999888765 889999999999999999999999999999863 234556788889999999875
Q ss_pred --CCeEEEEeeCCCeEEEEECCCCceEEeec-CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCCceEE
Q 018860 157 --DQTILSTCTDMGGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIES 232 (349)
Q Consensus 157 --~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 232 (349)
+..++++++.|+.|++||+++++....+. +..++.+++++|++++|++ +.|++|++||+++.+++..+.....+..
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~ 242 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFS 242 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEE
T ss_pred CCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEE
Confidence 34578888899999999999998877775 4568999999999988765 5699999999999999988888888999
Q ss_pred eeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEec--------CCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK--------GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--------~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
++|+|. +..+++++ +..+++|++..+..+..+. .|...+.+++|+|+|++|++|+.||+|++|++.
T Consensus 243 ~~~sp~-~~~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 243 LAFSPN-RYWLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEECSS-SSEEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEcCC-CCEEEEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 999985 67776665 4569999998877665543 346789999999999999999999999999864
No 7
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-45 Score=324.85 Aligned_cols=289 Identities=26% Similarity=0.451 Sum_probs=251.5
Q ss_pred ccceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEE
Q 018860 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86 (349)
Q Consensus 7 ~~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 86 (349)
.....+.||.++|.+++|+| ++++|++|+.|+.+++|+..+++.+..+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~---~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK 90 (312)
T ss_dssp EEEEEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eeEEEEcccCCcEEEEEECC---CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEE
Confidence 34456789999999999997 899999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEee
Q 018860 87 VWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT 165 (349)
Q Consensus 87 vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 165 (349)
+||+.+++++..+. |...|.+++|+|++++|++|+.|+.|++||+.... ....+..|...+.++.|++.+ .++++++
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~-~~l~~~~ 168 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK-CLKTLPAHSDPVSAVHFNRDG-SLIVSSS 168 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTS-SEEEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE-EEEEecCCCCcEEEEEEcCCC-CEEEEEe
Confidence 99999999888875 88899999999999999999999999999997543 344566788899999998754 4666778
Q ss_pred CCCeEEEEECCCCceEEeec--CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCCc---eEEeeecCCC
Q 018860 166 DMGGVRLWDVRSGEIVQTLE--TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCT---IESASLEPKY 239 (349)
Q Consensus 166 ~dg~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~ 239 (349)
.||.|++||+++++.+..+. ...++..+.|+|+++++++ +.|+.|++||+++.+++..+..... .....+.+.+
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG 248 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSS
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCC
Confidence 88999999999998877664 3457899999999988765 5699999999999988877754321 1233455556
Q ss_pred CCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEec--CCCCEEEecCC
Q 018860 240 GNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS--EDGTIRIWQTG 300 (349)
Q Consensus 240 ~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs--~Dg~v~vW~~~ 300 (349)
+.++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++ .|++|++|+.+
T Consensus 249 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 249 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 88999999999999999999999999999999999999999999999886 69999999863
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.4e-47 Score=345.20 Aligned_cols=289 Identities=21% Similarity=0.326 Sum_probs=247.4
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
.+|.||.++|++++|+| ++++|+|||.|+++++|+..+++.+..+++|...|.+++|+|++++|++|+.|+.|++||
T Consensus 60 ~~l~gH~~~V~~~~~sp---~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTP---EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFN 136 (380)
T ss_dssp EEECCCSSCEEEEEECT---TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred ecccccccEEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 45789999999999997 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-------EEEEe-ccCCeEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCCCCC----ceeccCCCCeEEEEEecC
Q 018860 90 ALTGD-------VLHSF-EHKHIVRACSFSED-THLLLTGGMEKILRIFDLNRPDAPP----REVDRSPGSVRTVAWLHS 156 (349)
Q Consensus 90 ~~~~~-------~~~~~-~~~~~v~~~~~s~~-~~~l~s~~~d~~i~lwd~~~~~~~~----~~~~~~~~~i~~~~~~~~ 156 (349)
+.+.. ....+ .|...|.++.|+|+ +..|++|+.|++|++||+.+..... ....+|...+.++.|.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 216 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL 216 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC
Confidence 86532 12222 47888999999996 5679999999999999997654311 112567888999999888
Q ss_pred CCeEEEEeeCCCeEEEEECC-CCceEEeec-CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCC-----
Q 018860 157 DQTILSTCTDMGGVRLWDVR-SGEIVQTLE-TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPC----- 228 (349)
Q Consensus 157 ~~~~l~~~~~dg~v~vwd~~-~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~----- 228 (349)
++.++++++.|++|++||++ .++.+..+. +...|.+++|+|++.++++ +.|++|++||++++..+..+....
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN 296 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence 88889999999999999998 456666665 4568999999999987755 569999999999998887765422
Q ss_pred ---ceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEe----cCCCcceeEEEEccCCCeEEEecCCCCEEEecCCC
Q 018860 229 ---TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACN----KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 229 ---~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~----~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
.+..++|+|. ++++++|+.|+.|++||+.+++.+..+ .+|.+.|++++|+|++++|+|||.||+|++|++..
T Consensus 297 ~~~~v~~~~~s~~-g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 297 ELPIVTSVAFSIS-GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SSCSCSEEEECSS-SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred ccCceEEEEECCC-CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 2567889885 899999999999999999998887766 68999999999999999999999999999999864
Q ss_pred C
Q 018860 302 V 302 (349)
Q Consensus 302 ~ 302 (349)
.
T Consensus 376 ~ 376 (380)
T 3iz6_a 376 H 376 (380)
T ss_dssp S
T ss_pred C
Confidence 3
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=330.40 Aligned_cols=282 Identities=16% Similarity=0.160 Sum_probs=232.6
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC-----------CCeEEEeecccCCeEEEEECCCCCeeEEeeC
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET-----------GDWIGTFEGHKGAVWSCCLDTNALRAASASA 81 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 81 (349)
.+|...|.+++|+| ||++|++++ |+++++|+... .........|...|.+++|++++ +|++|+.
T Consensus 27 ~~~~~~v~~~~fs~---dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~ 101 (344)
T 4gqb_B 27 ACMERQLEAARYRS---DGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD 101 (344)
T ss_dssp SSCCSEEEEEEECT---TSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET
T ss_pred ccccCCEEEEEECC---CCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC
Confidence 36788899999997 999998887 88899987321 11122233466789999999986 6889999
Q ss_pred CCeEEEEECCCCCEEEEe-----ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecC
Q 018860 82 DFSAKVWDALTGDVLHSF-----EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156 (349)
Q Consensus 82 D~~i~vWd~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~ 156 (349)
||+|||||+.+++.+..+ .|...|++++|+|++++|++|+.|++|++||+.+.. ....+.+|...|.+++|++.
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~-~~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV-VLSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECSS
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCcCCceEEEEecCC
Confidence 999999999988754432 488999999999999999999999999999997643 34567789999999999998
Q ss_pred CCeEEEEeeCCCeEEEEECCCCceEEeecC---CCCeeEEEEcCC-CcEEE-EecCCeEEEEecCCceeeEEEcC-CCce
Q 018860 157 DQTILSTCTDMGGVRLWDVRSGEIVQTLET---KSPVTSAEVSQD-GRYIT-TADGSTVKFWDANHFGLVKSYNM-PCTI 230 (349)
Q Consensus 157 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---~~~v~~~~~~~~-~~~l~-~~~d~~i~iwd~~~~~~~~~~~~-~~~~ 230 (349)
+..++++++.|++|++||+++++....+.. ...+.+++++|+ +++++ ++.|++|++||+++.+++..+.. ...+
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v 260 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCV 260 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCE
T ss_pred CCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCE
Confidence 888888999999999999999998877643 346889999985 45655 46799999999999988877754 4568
Q ss_pred EEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCC-eEEEecCCCCEEEecCCC
Q 018860 231 ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE-SYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~-~l~sgs~Dg~v~vW~~~~ 301 (349)
..++|+|...++|++|+.|++|++||+.+++.+ .+.+|.+.|++++|+|+++ +|+|||.||+|++|++..
T Consensus 261 ~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 261 TGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 899999975578999999999999999988765 5689999999999999986 567999999999999854
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.9e-45 Score=329.02 Aligned_cols=289 Identities=22% Similarity=0.311 Sum_probs=235.0
Q ss_pred ceeeccCCCceeeEEEee--cC-CCccEEEEEecCCCeEEEeCCCC-------CeEEEeecccCCeEEEEECCCCCeeEE
Q 018860 9 PLVCHGHSRPVVDLFYSP--IT-PDGFFLISASKDSSPMLRNGETG-------DWIGTFEGHKGAVWSCCLDTNALRAAS 78 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~--~~-~~~~~l~s~s~d~~i~iw~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~l~s 78 (349)
..+|.||.++|++++|.+ .+ +++++|++|+.|++|++|+..+. .....+.+|...|.+++|++++.+|+|
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 346789999999999821 12 38899999999999999997643 356788999999999999999999999
Q ss_pred eeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCC-CCceeccCCCCeEEEEEecC
Q 018860 79 ASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA-PPREVDRSPGSVRTVAWLHS 156 (349)
Q Consensus 79 ~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~-~~~~~~~~~~~i~~~~~~~~ 156 (349)
|+.|++|++||+.+++.+..+. |...|.+++|+|++++|++++.|++|++||+..... .......|...+.++.|.|.
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 9999999999999999888775 889999999999999999999999999999863211 01112357778999999876
Q ss_pred C---------CeEEEEeeCCCeEEEEECCCCceEEeec-CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecC-CceeeEEE
Q 018860 157 D---------QTILSTCTDMGGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDGRYITT-ADGSTVKFWDAN-HFGLVKSY 224 (349)
Q Consensus 157 ~---------~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~-~~~~~~~~ 224 (349)
. ..++++++.||.|++||. .++....+. +...+.+++|+|++++|++ +.|+.|++||++ .......+
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~ 252 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF 252 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEE
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceee
Confidence 5 257788888999999995 455555554 4568999999999988765 569999999994 44455555
Q ss_pred cCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEE--Eec-----------CCCcceeEEEEccCCCeEEEecCC
Q 018860 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIA--CNK-----------GHHGPVHCVRFSPGGESYASGSED 291 (349)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~--~~~-----------~h~~~i~~l~~sp~~~~l~sgs~D 291 (349)
.....+..++|+|. +.++ +++.|+.|++||+.+++... .+. +|...|.+++|+|++++|++|+.|
T Consensus 253 ~~~~~v~~v~~sp~-~~~l-a~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D 330 (343)
T 2xzm_R 253 DAGSTINQIAFNPK-LQWV-AVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD 330 (343)
T ss_dssp ECSSCEEEEEECSS-SCEE-EEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred cCCCcEEEEEECCC-CCEE-EEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence 55667889999985 5555 56678889999998766432 332 788899999999999999999999
Q ss_pred CCEEEecCC
Q 018860 292 GTIRIWQTG 300 (349)
Q Consensus 292 g~v~vW~~~ 300 (349)
|+|++|++.
T Consensus 331 g~v~~w~~~ 339 (343)
T 2xzm_R 331 GVIRTFSFE 339 (343)
T ss_dssp SEEEEEEEE
T ss_pred ceEEEEEEE
Confidence 999999864
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.7e-46 Score=335.51 Aligned_cols=283 Identities=17% Similarity=0.206 Sum_probs=231.1
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEec------CCCeEEEeCCCCCe----EEEeecccCCeEEEEECCCCCeeEEeeCC
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASK------DSSPMLRNGETGDW----IGTFEGHKGAVWSCCLDTNALRAASASAD 82 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~------d~~i~iw~~~~~~~----~~~~~~h~~~v~~~~~~~~~~~l~s~s~D 82 (349)
.+|++.|++|+||| ||++|++||. |+.+++|+..++.. .....+|...|.+++|+|++. +++++.|
T Consensus 39 ~~H~~~V~~v~fSp---DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~d 114 (357)
T 4g56_B 39 ACMEVQIGAVRYRR---DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDS 114 (357)
T ss_dssp -CCCSEEEEEEECS---SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETT
T ss_pred ccccCCEEEEEECC---CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECC
Confidence 47999999999997 9999999998 66788888766543 344567999999999999985 6678899
Q ss_pred CeEEEEECCCCCEEE-----EeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCC
Q 018860 83 FSAKVWDALTGDVLH-----SFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSD 157 (349)
Q Consensus 83 ~~i~vWd~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~ 157 (349)
++|+|||+.+++... ...|...|++++|+|++++|++|+.|++|++||+.+.. ....+..|...|.+++|++.+
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~-~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA-VLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTC
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEccCC
Confidence 999999998876543 23588899999999999999999999999999997643 345567888999999999888
Q ss_pred CeEEEEeeCCCeEEEEECCCCceEEeec---CCCCeeEEEEcCCC-cEEEE-ecCCeEEEEecCCceeeEEEcC-CCceE
Q 018860 158 QTILSTCTDMGGVRLWDVRSGEIVQTLE---TKSPVTSAEVSQDG-RYITT-ADGSTVKFWDANHFGLVKSYNM-PCTIE 231 (349)
Q Consensus 158 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~-~~l~~-~~d~~i~iwd~~~~~~~~~~~~-~~~~~ 231 (349)
..++++++.||+|++||++++++...+. +...+.+++|+|++ .++++ +.|+.|++||+++.++++.+.. ...+.
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNIT 273 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEE
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEE
Confidence 7788888889999999999988776553 34568999999975 56654 5689999999999888877764 45678
Q ss_pred EeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEcc-CCCeEEEecCCCCEEEecCCC
Q 018860 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSP-GGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp-~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
.++|+|...++|++|+.|++|++||+.+++.+..+ +|.++|++++|+| ++.+|+|||.||+|++|++..
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 89999876678999999999999999998877654 7999999999999 789999999999999999853
No 12
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.8e-45 Score=322.70 Aligned_cols=290 Identities=18% Similarity=0.267 Sum_probs=247.4
Q ss_pred ceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC-----eEEEeecccCCeEEEEECCCCCeeEEeeCCC
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD-----WIGTFEGHKGAVWSCCLDTNALRAASASADF 83 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 83 (349)
.-+|.||.++|++|+|+|. ++++|+|||.|++|++|+..+.+ +++.+++|...|.+++|+|++++|++++.|+
T Consensus 31 ~~tL~GH~~~V~~v~~sp~--~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQ--FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEECCCSSCEEEEEECTT--CTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEECCccCCEEEEEEeCC--CCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 3467899999999999982 36799999999999999976543 5678999999999999999999999999999
Q ss_pred eEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCC-CeEE
Q 018860 84 SAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSD-QTIL 161 (349)
Q Consensus 84 ~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~l 161 (349)
.|++|+........... +...+..+.+++++.+|++++.|+.+++||+............|...+..+.|.+.. ..++
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 99999998887666554 567788999999999999999999999999865443334456678889999998754 4567
Q ss_pred EEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCC
Q 018860 162 STCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKY 239 (349)
Q Consensus 162 ~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (349)
++++.|+.|++||+++++.+..+.. ..+|.+++|+|++++|++ +.|+.|++||+++..++..+.....+..+.+.|.
T Consensus 189 ~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~- 267 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPN- 267 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSS-
T ss_pred EEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCC-
Confidence 7888899999999999998888764 568999999999988765 5699999999999999998888888888888873
Q ss_pred CCEEEEecCCCeEEEEeCCCCcEEEEe---------cCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 240 GNKFVAGGEDMWVRFFDFHTGNEIACN---------KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 240 ~~~~~~~~~d~~i~v~d~~~~~~~~~~---------~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
..+++++.|+.|++||++++..+..+ .+|...|++++|+|++++|+||+.||+|+|||+..+
T Consensus 268 -~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 268 -RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp -SSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred -CceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 56778888999999999988766554 368899999999999999999999999999997543
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.9e-45 Score=349.30 Aligned_cols=288 Identities=18% Similarity=0.273 Sum_probs=241.2
Q ss_pred eeccCCCceeeEEEeecCCCcc-EEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 11 VCHGHSRPVVDLFYSPITPDGF-FLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~-~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
.+.||.++|.+++|+| ++. +|++|+.|+++++|+..+++++.++.+|...|++++|+|++++|+||+.|++|++||
T Consensus 142 ~l~gh~~~v~~v~f~p---~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKP---SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp CCCCCSSCEEEEEECS---SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eecCCCCCceEEEECC---CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 4679999999999998 665 699999999999999998899999999999999999999999999999999999999
Q ss_pred CCCCCEEEEe--------ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCC------------------------
Q 018860 90 ALTGDVLHSF--------EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP------------------------ 137 (349)
Q Consensus 90 ~~~~~~~~~~--------~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~------------------------ 137 (349)
+.+++++..+ .|...|.+++|+|++++|++++.|++|++||+.+.+..
T Consensus 219 ~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 298 (611)
T ss_dssp TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEE
T ss_pred CCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEE
Confidence 9999988877 48889999999999999999999999999998753210
Q ss_pred ------------------CceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEee---------------
Q 018860 138 ------------------PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL--------------- 184 (349)
Q Consensus 138 ------------------~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~--------------- 184 (349)
...+.+|...|.+++|+|+ +.+|++++.|++|++||+.+++....+
T Consensus 299 s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd-g~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~ 377 (611)
T 1nr0_A 299 SISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD-GKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS 377 (611)
T ss_dssp EEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECT
T ss_pred EEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC-CCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECC
Confidence 0123468889999999875 456667888899999999876543221
Q ss_pred --------------------------------------------------------------------cCCCCeeEEEEc
Q 018860 185 --------------------------------------------------------------------ETKSPVTSAEVS 196 (349)
Q Consensus 185 --------------------------------------------------------------------~~~~~v~~~~~~ 196 (349)
.+...+.+++|+
T Consensus 378 ~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~s 457 (611)
T 1nr0_A 378 KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALS 457 (611)
T ss_dssp TSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEEC
T ss_pred CCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEe
Confidence 011235678899
Q ss_pred CCCcEEEE-ecCCeEEEEecCCcee--eEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCC-CcEEEE--ecCCC
Q 018860 197 QDGRYITT-ADGSTVKFWDANHFGL--VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIAC--NKGHH 270 (349)
Q Consensus 197 ~~~~~l~~-~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~-~~~~~~--~~~h~ 270 (349)
|++++|++ +.|++|++||+..... .....+...+.+++|+|+ +++|++++.|++|++||+.+ ++.+.. ..+|.
T Consensus 458 pdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspd-g~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~ 536 (611)
T 1nr0_A 458 NDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNN-GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHT 536 (611)
T ss_dssp TTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTT-SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCS
T ss_pred CCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCC-CCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecc
Confidence 99988765 5689999999976543 334556677899999985 89999999999999999987 555443 34599
Q ss_pred cceeEEEEccCCCeEEEecCCCCEEEecCCCCC
Q 018860 271 GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVT 303 (349)
Q Consensus 271 ~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~ 303 (349)
..|++++|+|++++|||||.|++|++|++....
T Consensus 537 ~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 537 AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred cceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 999999999999999999999999999987543
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.7e-44 Score=324.56 Aligned_cols=281 Identities=21% Similarity=0.356 Sum_probs=237.0
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccC------------------CeEEEEECCCCCe
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG------------------AVWSCCLDTNALR 75 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~------------------~v~~~~~~~~~~~ 75 (349)
+|.+.|.+++|+| +|++|++|+ ++++++|+..+++.+..+.+|.. .|.+++|+|++++
T Consensus 62 ~h~~~V~~v~fsp---dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~ 137 (393)
T 1erj_A 62 DHTSVVCCVKFSN---DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 137 (393)
T ss_dssp ECSSCCCEEEECT---TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred CCCCEEEEEEECC---CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCE
Confidence 7999999999997 899999876 78999999999999888877643 3899999999999
Q ss_pred eEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEe
Q 018860 76 AASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWL 154 (349)
Q Consensus 76 l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~ 154 (349)
|++|+.|++|++||+.+++.+..+. |...|.+++|+|++++|++++.|++|++||+.+... .. ...+...+.+++|+
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~-~~-~~~~~~~v~~~~~~ 215 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC-SL-TLSIEDGVTTVAVS 215 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-EE-EEECSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee-EE-EEEcCCCcEEEEEE
Confidence 9999999999999999998887775 888999999999999999999999999999976432 11 22355679999999
Q ss_pred cCCCeEEEEeeCCCeEEEEECCCCceEEeec--------CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCce------
Q 018860 155 HSDQTILSTCTDMGGVRLWDVRSGEIVQTLE--------TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFG------ 219 (349)
Q Consensus 155 ~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~------ 219 (349)
|.++.++++++.||.|++||+++++.+..+. +...+.+++|+|++++|++ +.|++|++||++...
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 8788888899999999999999998876652 3457999999999987765 569999999997532
Q ss_pred ------eeEE-EcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEcc------CCCeEE
Q 018860 220 ------LVKS-YNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSP------GGESYA 286 (349)
Q Consensus 220 ------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp------~~~~l~ 286 (349)
+... ..+...+..+++.+. +.++++|+.|+.|++||..+++.+..+.+|...|.+++|+| ++++|+
T Consensus 296 ~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~ 374 (393)
T 1erj_A 296 TPNSGTCEVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA 374 (393)
T ss_dssp -----CEEEEEECCSSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE
T ss_pred CCCCCcceEEEecccCcEEEEEECCC-CCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE
Confidence 2222 234455778888875 78999999999999999999999999999999999999986 678999
Q ss_pred EecCCCCEEEecCCC
Q 018860 287 SGSEDGTIRIWQTGP 301 (349)
Q Consensus 287 sgs~Dg~v~vW~~~~ 301 (349)
|||.||+|++|++..
T Consensus 375 sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 375 TGSGDCKARIWKYKK 389 (393)
T ss_dssp EEETTSEEEEEEEEE
T ss_pred EECCCCcEEECcccc
Confidence 999999999998743
No 15
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-43 Score=315.08 Aligned_cols=293 Identities=27% Similarity=0.481 Sum_probs=259.7
Q ss_pred cccccceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCC
Q 018860 4 KKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADF 83 (349)
Q Consensus 4 ~~~~~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 83 (349)
|.....+.+.||.++|++++|+| ++++|++++.|+.+++|+..+++.+..+.+|...|.+++|++++.+|++++.|+
T Consensus 20 G~~~~~~~l~~h~~~v~~~~~s~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 96 (369)
T 3zwl_B 20 GSHMKAIKLTGHERPLTQVKYNK---EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY 96 (369)
T ss_dssp CCSEEEEEEECCSSCEEEEEECT---TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred ccccccEEEEEeeceEEEEEEcC---CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence 44556677899999999999997 899999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCC----------CCceeccCCC--
Q 018860 84 SAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGME-----KILRIFDLNRPDA----------PPREVDRSPG-- 146 (349)
Q Consensus 84 ~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----~~i~lwd~~~~~~----------~~~~~~~~~~-- 146 (349)
.|++||+.+++.+..+.+...+.+++|+|+++++++++.+ +.|++||+..... ....+..+..
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD 176 (369)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred eEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence 9999999999999999999999999999999999999999 9999999875442 2223344444
Q ss_pred CeEEEEEecCCCeEEEEeeCCCeEEEEECCC-CceEEeec-CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEE
Q 018860 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRS-GEIVQTLE-TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKS 223 (349)
Q Consensus 147 ~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~ 223 (349)
.+.+++|+|.+. ++++++.+|.|++||+++ ++.+..+. +...+.++.|+|++.++++ +.|+.|++||+++...+..
T Consensus 177 ~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 177 AATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp CEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 899999988555 556677789999999998 67777776 4568999999999987755 5689999999999999998
Q ss_pred EcCCCceEEeeecCCCCCEEEEecCCC--------------eEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEec
Q 018860 224 YNMPCTIESASLEPKYGNKFVAGGEDM--------------WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~d~--------------~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs 289 (349)
+.....+..+.+.|. +.++++++.++ .+++||..+++.+..+.+|...|.+++|+|++++|++++
T Consensus 256 ~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 256 YETDCPLNTAVITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp EECSSCEEEEEECSS-SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ecCCCCceeEEecCC-CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc
Confidence 888888899999985 78888888887 899999999999999999999999999999999999999
Q ss_pred CCCCEEEecCCC
Q 018860 290 EDGTIRIWQTGP 301 (349)
Q Consensus 290 ~Dg~v~vW~~~~ 301 (349)
.||+|++|++..
T Consensus 335 ~dg~v~iw~~~~ 346 (369)
T 3zwl_B 335 EDGFIRLHHFEK 346 (369)
T ss_dssp TTSEEEEEEECH
T ss_pred CCCeEEEEECcc
Confidence 999999999754
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5e-44 Score=320.18 Aligned_cols=294 Identities=21% Similarity=0.331 Sum_probs=235.9
Q ss_pred ccccceeeccCCC-ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeE--E-EeecccCCeEEEEECCCCCeeEEee
Q 018860 5 KIAVPLVCHGHSR-PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWI--G-TFEGHKGAVWSCCLDTNALRAASAS 80 (349)
Q Consensus 5 ~~~~~~~~~gh~~-~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~--~-~~~~h~~~v~~~~~~~~~~~l~s~s 80 (349)
.+.....+.+|.+ .|.+++|+| +|++|++|+.|++|++|+..++.++ . ...+|...|.+++|+|++.+|++|+
T Consensus 4 ~~~~~~~~~~h~~~~v~~l~~sp---~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s 80 (345)
T 3fm0_A 4 SLVLLGRVPAHPDSRCWFLAWNP---AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS 80 (345)
T ss_dssp CEEEEEEECCSTTSCEEEEEECT---TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEeeeecCCCCCcEEEEEECC---CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE
Confidence 4445556789998 999999997 8999999999999999998877643 2 2368999999999999999999999
Q ss_pred CCCeEEEEECCCCC--EEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCC--CceeccCCCCeEEEEEec
Q 018860 81 ADFSAKVWDALTGD--VLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP--PREVDRSPGSVRTVAWLH 155 (349)
Q Consensus 81 ~D~~i~vWd~~~~~--~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~--~~~~~~~~~~i~~~~~~~ 155 (349)
.|++|++|+...+. ++..+. |...|.+++|+|++++|++|+.|++|++||+...... ...+..|...|.+++|+|
T Consensus 81 ~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p 160 (345)
T 3fm0_A 81 FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160 (345)
T ss_dssp TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS
T ss_pred CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC
Confidence 99999999988764 455554 8899999999999999999999999999999754321 234567888999999987
Q ss_pred CCCeEEEEeeCCCeEEEEECCCCce--EEeec-CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCc-------------
Q 018860 156 SDQTILSTCTDMGGVRLWDVRSGEI--VQTLE-TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHF------------- 218 (349)
Q Consensus 156 ~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~------------- 218 (349)
.+. +|++++.|++|++||+++++. ...+. +...|.+++|+|++++|++ +.|++|++||....
T Consensus 161 ~~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 161 SQE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp SSS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred CCC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence 654 566788889999999988753 34554 4568999999999987755 57999999996321
Q ss_pred --eeeEEEc--CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCc---------EEEEecCCCcceeEEEEccCCC-e
Q 018860 219 --GLVKSYN--MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN---------EIACNKGHHGPVHCVRFSPGGE-S 284 (349)
Q Consensus 219 --~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~---------~~~~~~~h~~~i~~l~~sp~~~-~ 284 (349)
.++..+. +...+..++|+|. +..+++++.|+.|++|+..... ......+|...|++++|+|++. +
T Consensus 240 ~~~~~~~~~~~h~~~v~~v~~~~~-~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~ 318 (345)
T 3fm0_A 240 SWKCICTLSGFHSRTIYDIAWCQL-TGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGL 318 (345)
T ss_dssp EEEEEEEECSSCSSCEEEEEECTT-TCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTE
T ss_pred ccceeEEecCCCCCcEEEEEEecC-CCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceE
Confidence 1222222 3446788899885 7789999999999999986542 1223468999999999999984 8
Q ss_pred EEEecCCCCEEEecCCCCC
Q 018860 285 YASGSEDGTIRIWQTGPVT 303 (349)
Q Consensus 285 l~sgs~Dg~v~vW~~~~~~ 303 (349)
|||||.||+|++|++....
T Consensus 319 laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 319 LASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EEEEETTSCEEEEEECC--
T ss_pred EEEcCCCCcEEEEEecCCC
Confidence 9999999999999986543
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-44 Score=316.33 Aligned_cols=284 Identities=19% Similarity=0.253 Sum_probs=223.8
Q ss_pred ceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCC--CeEEEe-ec-ccCCeEEEEECCCCCeeEEeeCCCe
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETG--DWIGTF-EG-HKGAVWSCCLDTNALRAASASADFS 84 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~--~~~~~~-~~-h~~~v~~~~~~~~~~~l~s~s~D~~ 84 (349)
...+.||+++|.++.|+| + +|++|+.|++|++|+..++ +.+..+ .+ |...|.+++|+|++.+|++|+.|++
T Consensus 7 ~~~~~~h~~~v~~~~~s~---~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQ---G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp EEEEECCSSCEEEEEEET---T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred ceeeccCCCceeeeccCC---C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 345789999999999986 4 9999999999999998765 455666 45 9999999999999999999999999
Q ss_pred EEEEECCC-------CCEEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCC---CCceeccCCCCeEEEEE
Q 018860 85 AKVWDALT-------GDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA---PPREVDRSPGSVRTVAW 153 (349)
Q Consensus 85 i~vWd~~~-------~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~---~~~~~~~~~~~i~~~~~ 153 (349)
|+|||+.. .+.+..+ .|...|.+++|+|++++|++|+.|++|++||+..... ....+..|...|.++.|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99999853 2344555 4888999999999999999999999999999954322 22346778899999999
Q ss_pred ecCCCeEEEEeeCCCeEEEEECCCC--ceEEeecC-CCCeeEEEEcCC--CcEE-EEecCCeEEEEecCCc--------e
Q 018860 154 LHSDQTILSTCTDMGGVRLWDVRSG--EIVQTLET-KSPVTSAEVSQD--GRYI-TTADGSTVKFWDANHF--------G 219 (349)
Q Consensus 154 ~~~~~~~l~~~~~dg~v~vwd~~~~--~~~~~~~~-~~~v~~~~~~~~--~~~l-~~~~d~~i~iwd~~~~--------~ 219 (349)
+|.+ .+|++++.|++|++||.+++ +++..+.. ...|.++.|+|+ +.++ +++.|++|++||++.. .
T Consensus 162 ~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 162 HPSE-ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp CSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred CCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 8754 56778888899999999876 56666654 568999999998 5554 5677999999998654 2
Q ss_pred eeEEEc--CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCc--EEE-EecCCCc-ceeEEEEcc--CCCeEEEecCC
Q 018860 220 LVKSYN--MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN--EIA-CNKGHHG-PVHCVRFSP--GGESYASGSED 291 (349)
Q Consensus 220 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~--~~~-~~~~h~~-~i~~l~~sp--~~~~l~sgs~D 291 (349)
+...+. +...+..++|.+ +..+++++.|+.|++||..+++ .+. ...+|.. .|.+++|+| ++++|+|||.|
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~--~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGF--NGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp EEEECCSCCSSCEEEEEECT--TSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT
T ss_pred EeeecccccccceEEEEEcC--CCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCC
Confidence 333332 445678888885 4589999999999999998774 232 3467887 899999999 68899999999
Q ss_pred CCEEEecCC
Q 018860 292 GTIRIWQTG 300 (349)
Q Consensus 292 g~v~vW~~~ 300 (349)
|+|++|++.
T Consensus 319 g~v~~W~~~ 327 (330)
T 2hes_X 319 GIVNFWSLE 327 (330)
T ss_dssp SEEEEEEC-
T ss_pred CcEEEEEec
Confidence 999999974
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.1e-44 Score=342.26 Aligned_cols=284 Identities=21% Similarity=0.343 Sum_probs=235.2
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEee-------cccCCeEEEEECCCCCeeEEeeCC
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE-------GHKGAVWSCCLDTNALRAASASAD 82 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~s~D 82 (349)
.++.+|.+.|.+++|+| +|++|++|+.|++|++|+..+++.+..+. +|.+.|++++|+|++++|+|++.|
T Consensus 184 ~~l~~H~~~V~~v~fsp---dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D 260 (611)
T 1nr0_A 184 STFGEHTKFVHSVRYNP---DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD 260 (611)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT
T ss_pred eeeccccCceEEEEECC---CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC
Confidence 35689999999999997 89999999999999999999999988884 899999999999999999999999
Q ss_pred CeEEEEECCCCCEEEEe--------------------------------------------ccCCeEEEEEEcCCCCEEE
Q 018860 83 FSAKVWDALTGDVLHSF--------------------------------------------EHKHIVRACSFSEDTHLLL 118 (349)
Q Consensus 83 ~~i~vWd~~~~~~~~~~--------------------------------------------~~~~~v~~~~~s~~~~~l~ 118 (349)
++||+||+.+++++..+ .|...|.+++|+|++++|+
T Consensus 261 ~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~ 340 (611)
T 1nr0_A 261 KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLF 340 (611)
T ss_dssp SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEE
Confidence 99999999887665432 3677899999999999999
Q ss_pred EEeCCCeEEEEECCCCCCCCceec--------------------------------------------------------
Q 018860 119 TGGMEKILRIFDLNRPDAPPREVD-------------------------------------------------------- 142 (349)
Q Consensus 119 s~~~d~~i~lwd~~~~~~~~~~~~-------------------------------------------------------- 142 (349)
+++.|++|++||+.+.........
T Consensus 341 s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s 420 (611)
T 1nr0_A 341 SADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVS 420 (611)
T ss_dssp EEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEEC
T ss_pred EEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEe
Confidence 999999999999864321000000
Q ss_pred -------------------------cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce--EEeecCCCCeeEEEE
Q 018860 143 -------------------------RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI--VQTLETKSPVTSAEV 195 (349)
Q Consensus 143 -------------------------~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~~~~v~~~~~ 195 (349)
.+...+.+++|+|+ +.++++++.|++|++||+.++.. .....+...+.+++|
T Consensus 421 ~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd-g~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~f 499 (611)
T 1nr0_A 421 ADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND-KQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAF 499 (611)
T ss_dssp TTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT-SCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEE
T ss_pred CCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC-CCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEE
Confidence 01234567787764 56777888889999999987654 334456778999999
Q ss_pred cCCCcEEEE-ecCCeEEEEecCC-ceeeEE--Ec-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCc-EE-EEecC
Q 018860 196 SQDGRYITT-ADGSTVKFWDANH-FGLVKS--YN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN-EI-ACNKG 268 (349)
Q Consensus 196 ~~~~~~l~~-~~d~~i~iwd~~~-~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~-~~-~~~~~ 268 (349)
+|++++|++ +.|++|++||+.+ .++... +. +...+.+++|+|+ +++|++|+.|++|++||+.++. .+ ..+.+
T Consensus 500 spdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspd-g~~lasgs~D~~v~lW~~~~~~~~~~~~~~~ 578 (611)
T 1nr0_A 500 SNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD-NVRLATGSLDNSVIVWNMNKPSDHPIIIKGA 578 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTCTTSCCEEETTS
T ss_pred CCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCC-CCEEEEEECCCcEEEEECCCcccccchhhcc
Confidence 999998866 5699999999987 554432 22 5567889999985 8999999999999999998765 33 56778
Q ss_pred C-CcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 269 H-HGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 269 h-~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
| ...|.+++|+|++. |+||+.|++|++|++
T Consensus 579 h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 579 HAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp STTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred CcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 9 89999999999998 999999999999997
No 19
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.4e-43 Score=342.81 Aligned_cols=286 Identities=19% Similarity=0.273 Sum_probs=240.9
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCC-----CeEEEeecccCCeEEEEECCCCCeeEEeeCCCeE
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETG-----DWIGTFEGHKGAVWSCCLDTNALRAASASADFSA 85 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i 85 (349)
.+.||.+.|++|+|+| .++++|+|||.|++|++|+..+. ...+.+.+|...|.+++|++++++|+||+.|++|
T Consensus 377 ~l~~H~~~V~~v~~~~--~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPI--DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEECCSSCEEEEECCT--TCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hcccCCceeEEEEecC--CCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 5689999999999987 24579999999999999997653 3567889999999999999999999999999999
Q ss_pred EEEECCCCCEEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCC--CceeccCCCCeEEEEEecCC-CeEE
Q 018860 86 KVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP--PREVDRSPGSVRTVAWLHSD-QTIL 161 (349)
Q Consensus 86 ~vWd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~--~~~~~~~~~~i~~~~~~~~~-~~~l 161 (349)
+|||+.++..++.+ .|...|.+++|+|++++|++|+.|++|++||+...... .....+|...|.++.|+|.. ..++
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 99999999888776 48899999999999999999999999999997532110 11124677889999999865 3577
Q ss_pred EEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCC
Q 018860 162 STCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKY 239 (349)
Q Consensus 162 ~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (349)
++++.|++|++||++++++...+.. ...+.+++++|+++++++ +.|++|++||+++.+.+..+.....+..++|+|.
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~- 613 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPN- 613 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSS-
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCC-
Confidence 8888899999999999998888764 568999999999988765 5699999999999998888877778889999984
Q ss_pred CCEEEEecCCCeEEEEeCCCCcEEEEecCCC-------------------cceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 240 GNKFVAGGEDMWVRFFDFHTGNEIACNKGHH-------------------GPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 240 ~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~-------------------~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
+..+ +++.++.|++||+.+++.+..+..+. ..+++++|||++++|+|||.||+|++|++.
T Consensus 614 ~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 614 RYWL-CAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp SSEE-EEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CcEE-EEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 4544 45566779999999988877654321 247899999999999999999999999975
No 20
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5e-43 Score=318.57 Aligned_cols=293 Identities=18% Similarity=0.177 Sum_probs=253.0
Q ss_pred CCccccccceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC------eEEEeecccCCeEEEEECCC--
Q 018860 1 MDKKKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD------WIGTFEGHKGAVWSCCLDTN-- 72 (349)
Q Consensus 1 ~~~~~~~~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~------~~~~~~~h~~~v~~~~~~~~-- 72 (349)
|.|.++....++.+|.++|++++|+| .+|++|+.|++|++|+..+++ .+..+.+|...|.+++|+++
T Consensus 1 m~~~~~~~~~~~~~h~~~i~~~~~~~-----~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 75 (397)
T 1sq9_A 1 MSKVFIATANAGKAHDADIFSVSACN-----SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIE 75 (397)
T ss_dssp --CEEEEEEEESSCSSSCEEEEEECS-----SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEE
T ss_pred CchhhhhhhhhhhhhhcCeEEEEecC-----CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccc
Confidence 77788888888999999999999986 589999999999999999887 78999999999999999999
Q ss_pred --C---CeeEEeeCCCeEEEEECCCCCE-----EEEec-c-----CCeEEEEEEc----CCCCE-EEEEeCCCeEEEEEC
Q 018860 73 --A---LRAASASADFSAKVWDALTGDV-----LHSFE-H-----KHIVRACSFS----EDTHL-LLTGGMEKILRIFDL 131 (349)
Q Consensus 73 --~---~~l~s~s~D~~i~vWd~~~~~~-----~~~~~-~-----~~~v~~~~~s----~~~~~-l~s~~~d~~i~lwd~ 131 (349)
+ .+|++++.|+.|++|++.+++. ...+. | ...|.+++|+ |++++ |++++.|+.|++||+
T Consensus 76 ~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 155 (397)
T 1sq9_A 76 RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 155 (397)
T ss_dssp TTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEE
T ss_pred cCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeC
Confidence 9 9999999999999999988875 55554 5 4889999999 99999 999999999999999
Q ss_pred CC------CCCCC----cee-------ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-------C
Q 018860 132 NR------PDAPP----REV-------DRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-------K 187 (349)
Q Consensus 132 ~~------~~~~~----~~~-------~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-------~ 187 (349)
.. ..... ..+ ..|...+.+++|+|.+ ++++++.+|.|++||+++++.+..+.. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 156 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 233 (397)
T ss_dssp ESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC
T ss_pred CccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccC
Confidence 76 33322 033 3477889999999866 777888889999999999999888876 6
Q ss_pred CCeeEEEEcCCCcEEEEe-cC---CeEEEEecCCceeeEEEc--------------CCCceEEeeecCCCCCEEEEecCC
Q 018860 188 SPVTSAEVSQDGRYITTA-DG---STVKFWDANHFGLVKSYN--------------MPCTIESASLEPKYGNKFVAGGED 249 (349)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~-~d---~~i~iwd~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~d 249 (349)
.++.+++|+|++.+++++ .| +.|++||+++.+++..+. +...+..++|+|. +++|++++.|
T Consensus 234 ~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 312 (397)
T 1sq9_A 234 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWD 312 (397)
T ss_dssp CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSS-SSEEEEEETT
T ss_pred CccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCC-CCEEEEEeCC
Confidence 789999999999887654 57 899999999988888776 4556888999984 8899999999
Q ss_pred CeEEEEeCCCCcEEEEec------CC---------------CcceeEEEEccCC----------CeEEEecCCCCEEEec
Q 018860 250 MWVRFFDFHTGNEIACNK------GH---------------HGPVHCVRFSPGG----------ESYASGSEDGTIRIWQ 298 (349)
Q Consensus 250 ~~i~v~d~~~~~~~~~~~------~h---------------~~~i~~l~~sp~~----------~~l~sgs~Dg~v~vW~ 298 (349)
+.|++||+.+++.+..+. +| ..+|.+++|+|++ ++|++|+.||.|++|+
T Consensus 313 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 999999999999998888 88 9999999999998 7999999999999998
Q ss_pred CCC
Q 018860 299 TGP 301 (349)
Q Consensus 299 ~~~ 301 (349)
+..
T Consensus 393 ~~~ 395 (397)
T 1sq9_A 393 EAG 395 (397)
T ss_dssp EEC
T ss_pred cCC
Confidence 753
No 21
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.8e-42 Score=306.20 Aligned_cols=292 Identities=16% Similarity=0.234 Sum_probs=238.0
Q ss_pred cceeeccCCCceeeEEEeecCCCcc-EEEEEec---CCCeEEEeCCCCCeEEEe-ecccCCeEEEEECCC---CCeeEEe
Q 018860 8 VPLVCHGHSRPVVDLFYSPITPDGF-FLISASK---DSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDTN---ALRAASA 79 (349)
Q Consensus 8 ~~~~~~gh~~~v~~~~fs~~~~~~~-~l~s~s~---d~~i~iw~~~~~~~~~~~-~~h~~~v~~~~~~~~---~~~l~s~ 79 (349)
...++.+|.++|.+++|+| ++. ++++|+. |+.+++|+..+++..... .+|...|.+++|+++ +.+|++|
T Consensus 10 ~~~~~~~h~~~v~~~~~~p---~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 86 (357)
T 3i2n_A 10 IAHIQKGFNYTVFDCKWVP---CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATG 86 (357)
T ss_dssp EEEEEEECSSCEEEEEECT---TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEE
T ss_pred hhhhccCCCCceEEEEEcC---CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEe
Confidence 3345678999999999997 664 5566666 999999999988876544 379999999999998 6999999
Q ss_pred eCCCeEEEEECCCCC-EEEEec-cCCeEEEEE------EcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCC----C
Q 018860 80 SADFSAKVWDALTGD-VLHSFE-HKHIVRACS------FSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG----S 147 (349)
Q Consensus 80 s~D~~i~vWd~~~~~-~~~~~~-~~~~v~~~~------~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~----~ 147 (349)
+.|+.|++||+.+++ .+..+. |...|.+++ |+|++++|++++.|+.|++||+.........+..+.+ .
T Consensus 87 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred cCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 999999999999887 666664 888999995 5789999999999999999999876645555544443 7
Q ss_pred eEEEEEec---CCCeEEEEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcC---CCcEEE-EecCCeEEEEecCCcee
Q 018860 148 VRTVAWLH---SDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQ---DGRYIT-TADGSTVKFWDANHFGL 220 (349)
Q Consensus 148 i~~~~~~~---~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~-~~~d~~i~iwd~~~~~~ 220 (349)
+.++.|.+ +++.++++++.+|.|++||+++++......+...+.++.|+| ++.+++ ++.|+.|++||+++...
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHP 246 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEET
T ss_pred eEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCc
Confidence 88888532 566777788888999999999999877777788999999999 777665 45699999999987665
Q ss_pred eEEE------cCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCC-------------------cEEEEecCCCcceeE
Q 018860 221 VKSY------NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTG-------------------NEIACNKGHHGPVHC 275 (349)
Q Consensus 221 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~-------------------~~~~~~~~h~~~i~~ 275 (349)
...+ .+...+..++|+|....++++++.|+.|++||+.++ +.+..+.+|..+|.+
T Consensus 247 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~ 326 (357)
T 3i2n_A 247 TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISS 326 (357)
T ss_dssp TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEE
T ss_pred ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeE
Confidence 4443 355678889999863338999999999999998754 356677899999999
Q ss_pred EEEccCCCeEE-EecCCCCEEEecCCCC
Q 018860 276 VRFSPGGESYA-SGSEDGTIRIWQTGPV 302 (349)
Q Consensus 276 l~~sp~~~~l~-sgs~Dg~v~vW~~~~~ 302 (349)
++|+|++++|+ +++.||.|++|++...
T Consensus 327 ~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 327 LDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 99999999998 8999999999998654
No 22
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.6e-42 Score=309.17 Aligned_cols=282 Identities=17% Similarity=0.220 Sum_probs=235.0
Q ss_pred ceeeccCCCceeeEEEeecCCCc-cEEEEEecCCCeEEEeCCCCCeEEEee--cccCCeEEEEECC-CCCeeEEeeCCCe
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDG-FFLISASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDT-NALRAASASADFS 84 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~-~~l~s~s~d~~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~-~~~~l~s~s~D~~ 84 (349)
...+.+|.+.|.+++|+| ++ ++|++|+.|+.|++|+..+++....+. +|...|.+++|+| ++.+|++++.|+.
T Consensus 66 ~~~~~~h~~~v~~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 142 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHP---THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA 142 (383)
T ss_dssp EEEECCCSSCEEEEEECS---SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTE
T ss_pred EEeccCCCCCEEEEEECC---CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE
Confidence 445689999999999997 67 899999999999999999888777765 6999999999999 7899999999999
Q ss_pred EEEEECCCCCEEEEe-c---cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeE
Q 018860 85 AKVWDALTGDVLHSF-E---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160 (349)
Q Consensus 85 i~vWd~~~~~~~~~~-~---~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 160 (349)
|++||+.+ ..+..+ . +...|.+++|+|++++|++|+.|+.|++||+. ......+..|...|.+++|+|.+..+
T Consensus 143 i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 143 TTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--GHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--SCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--CCEEEEeccCCCcEEEEEECCCCCCE
Confidence 99999986 444444 2 34779999999999999999999999999984 33445667888999999999887768
Q ss_pred EEEeeCCCeEEEEECCC----CceEEeecCCCCeeEEEEcC-CCcEEEE-ecCCeEEEEecCCceeeEEEcCC-------
Q 018860 161 LSTCTDMGGVRLWDVRS----GEIVQTLETKSPVTSAEVSQ-DGRYITT-ADGSTVKFWDANHFGLVKSYNMP------- 227 (349)
Q Consensus 161 l~~~~~dg~v~vwd~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~------- 227 (349)
+++++.|+.|++||+++ +.++..+.+...+.++.|+| ++.++++ +.|+.|++||+++......+...
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccc
Confidence 88888999999999998 66777777888999999999 9887765 56899999999887654443211
Q ss_pred -----------CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecC--CCcceeEEEEccCCCeEEEecCCCCE
Q 018860 228 -----------CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG--HHGPVHCVRFSPGGESYASGSEDGTI 294 (349)
Q Consensus 228 -----------~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~--h~~~i~~l~~sp~~~~l~sgs~Dg~v 294 (349)
.....+++.|. +++ +++.|+.|++||+.+++.+..+.+ |...+..++|+|++++|++|+ ||.|
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~d-g~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i 375 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPD-DQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNI 375 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCC-TTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEE
T ss_pred ccceEEeccCCCCceEEEecCC-ccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcE
Confidence 12223444443 333 778999999999999999988876 567788889999999999998 9999
Q ss_pred EEecCC
Q 018860 295 RIWQTG 300 (349)
Q Consensus 295 ~vW~~~ 300 (349)
++|++.
T Consensus 376 ~iw~~~ 381 (383)
T 3ei3_B 376 LIWNRE 381 (383)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 999975
No 23
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.2e-41 Score=319.53 Aligned_cols=277 Identities=30% Similarity=0.545 Sum_probs=237.8
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
..+.+|.++|.+++|+| ++++|++++.|+++++|+.. +..+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 297 ~~~~~h~~~v~~~~~~~---~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 297 QTLTGHSSSVWGVAFSP---DGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEecCCCCeEEEEECC---CCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 34579999999999997 89999999999999999975 456778899999999999999999999999999999999
Q ss_pred CCCCCEEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 018860 90 ALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMG 168 (349)
Q Consensus 90 ~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 168 (349)
. +++.+..+ .|...|++++|+|++++|++++.|+.|++||.. ......+..|...+.+++|+|++ .++++++.|+
T Consensus 373 ~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~ 448 (577)
T 2ymu_A 373 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDD-QTIASASDDK 448 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT--CCEEEEEECCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC--CCEEEEecCCCCCeEEEEECCCC-CEEEEEcCCC
Confidence 6 45666655 488899999999999999999999999999964 23345667888999999998755 4566778889
Q ss_pred eEEEEECCCCceEEeec-CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEc-CCCceEEeeecCCCCCEEEE
Q 018860 169 GVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVA 245 (349)
Q Consensus 169 ~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 245 (349)
+|++||. +++.+..+. +..++.+++|+|++++|++ +.|++|++||.. +++++.+. +...+..++|+|+ +++|++
T Consensus 449 ~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~~~~~h~~~v~~l~~s~d-g~~l~s 525 (577)
T 2ymu_A 449 TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPD-GQTIAS 525 (577)
T ss_dssp EEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTT-SSCEEE
T ss_pred EEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEEEEEeCCCCCEEEEEEcCC-CCEEEE
Confidence 9999996 455665554 4668999999999998765 568999999964 45555544 4567889999984 889999
Q ss_pred ecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 246 GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 246 ~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
++.|+.|++||. +++.+..+.+|.+.|++++|+|++++|+|+|.|++|++||
T Consensus 526 ~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 526 ASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999995 6788899999999999999999999999999999999997
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.1e-40 Score=294.02 Aligned_cols=282 Identities=15% Similarity=0.186 Sum_probs=242.7
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCe---EEEee--cccCCeEEEEECCCCCeeEEeeCCCe
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDW---IGTFE--GHKGAVWSCCLDTNALRAASASADFS 84 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~---~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~~ 84 (349)
+...+|.++|.+++|+| ++++|++++ |+.+++|+..+++. +..+. +|...|.+++|+|++++|++++.|+.
T Consensus 45 ~~~~~h~~~v~~~~~~~---~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 120 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISN---PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAST 120 (337)
T ss_dssp EEEECCSSCCCEEEECS---SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSE
T ss_pred ceeccCCCceEEEEEec---CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 34458999999999997 899999998 99999999887653 34444 79999999999999999999999999
Q ss_pred EEEEECCCCC--EEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEE
Q 018860 85 AKVWDALTGD--VLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTIL 161 (349)
Q Consensus 85 i~vWd~~~~~--~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l 161 (349)
|++||+.+++ ....+ .|...|.+++|+|+++++++++.|+.|++||+.... ....+..|...+.++.|+|++ .++
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~-~~~~~~~~~~~i~~~~~~~~~-~~l 198 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTDGASCIDISNDG-TKL 198 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTS-SEE
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc-eeeeeecccCceEEEEECCCC-CEE
Confidence 9999999887 33343 377889999999999999999999999999997543 334566788899999998755 456
Q ss_pred EEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCC
Q 018860 162 STCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYG 240 (349)
Q Consensus 162 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (349)
++++.+|.|++||+++++.+..+.....+.++.++|++.++++ +.++.|++||+++........+...+..+.|+|. +
T Consensus 199 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~ 277 (337)
T 1gxr_A 199 WTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYC-G 277 (337)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTT-S
T ss_pred EEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCC-C
Confidence 6777889999999999999888888889999999999988765 4689999999998887766666777889999984 8
Q ss_pred CEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 241 NKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 241 ~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
+++++++.|+.|++||+.+++.+.. ..|...|.+++|+|++++|++++.||.|++|++
T Consensus 278 ~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 278 KWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 8999999999999999999888754 458899999999999999999999999999985
No 25
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-40 Score=293.48 Aligned_cols=249 Identities=20% Similarity=0.296 Sum_probs=213.1
Q ss_pred CeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEE
Q 018860 52 DWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFD 130 (349)
Q Consensus 52 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd 130 (349)
+..++|++|.+.|.+++|+|++++|+|++.|++|++||+.+++.+..+. |...|.+++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 4678899999999999999999999999999999999999998888876 778999999999999999999999999999
Q ss_pred CCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCc-eEEeec-CCCCeeEEEEcC-CCcEE-EEec
Q 018860 131 LNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE-IVQTLE-TKSPVTSAEVSQ-DGRYI-TTAD 206 (349)
Q Consensus 131 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~-~~~~v~~~~~~~-~~~~l-~~~~ 206 (349)
+.+.. ....+..|...|.+++|+|.+. ++++++.|++|++||++++. ....+. +...+.+++|+| ++.++ +++.
T Consensus 84 ~~~~~-~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 84 YNTGE-KVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp TTTCC-EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred CCCCc-EEEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 97644 3456778999999999987654 56688888999999998874 445555 456799999999 55655 5567
Q ss_pred CCeEEEEecCCceeeEEEc--CCCceEEeeecCC-CCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCC
Q 018860 207 GSTVKFWDANHFGLVKSYN--MPCTIESASLEPK-YGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE 283 (349)
Q Consensus 207 d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~ 283 (349)
|++|++||++.......+. ....+..+.+.|. ++.++++|+.|++|++||+++++.+..+.+|...|.+++|+|+++
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 9999999998766554443 2345667777763 467999999999999999999999999999999999999999999
Q ss_pred eEEEecCCCCEEEecCCCC
Q 018860 284 SYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 284 ~l~sgs~Dg~v~vW~~~~~ 302 (349)
+|+||+.||+|++||+...
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp EEEEEETTSCEEEEETTTC
T ss_pred EEEEEcCCCeEEEEECCCC
Confidence 9999999999999998654
No 26
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-40 Score=291.79 Aligned_cols=284 Identities=19% Similarity=0.252 Sum_probs=244.1
Q ss_pred ccceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEE
Q 018860 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86 (349)
Q Consensus 7 ~~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 86 (349)
....++.||.++|.+++| | ++++|++|+.||.+++|+..+++....+..|...|.+++|++++.+|++++.|+.|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~---~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-V---DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-E---ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred HHHHHhhCCCCCcEEEEe-c---CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 344567899999999999 6 688999999999999999999989999999999999999999999999999999999
Q ss_pred EEECCCC---CEEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEE
Q 018860 87 VWDALTG---DVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILS 162 (349)
Q Consensus 87 vWd~~~~---~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 162 (349)
+|++... +.+..+ .|...|.+++| +++++++++.|+.|++||. ......+..|...+.++.|.+.++.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE---GSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET---TEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC---CcEEEecccCCCceeEEEEccCCCCEEE
Confidence 9998765 334444 48889999999 6789999999999999992 2334556778889999999997777788
Q ss_pred EeeCCCeEEEEECCCCceEEeec--CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEc-CCCceEEeeecCCC
Q 018860 163 TCTDMGGVRLWDVRSGEIVQTLE--TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYN-MPCTIESASLEPKY 239 (349)
Q Consensus 163 ~~~~dg~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~ 239 (349)
+++.+|.|++||. ++....+. +...+.++.++|++.+++++.|+.|++||+++.+++..+. +...+..++|+|.
T Consensus 160 ~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~- 236 (313)
T 3odt_A 160 TASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN- 236 (313)
T ss_dssp EEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT-
T ss_pred EEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC-
Confidence 8888999999994 44555554 5668999999999997778889999999999988888776 4566888999985
Q ss_pred CCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCCCC
Q 018860 240 GNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTN 304 (349)
Q Consensus 240 ~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~~ 304 (349)
+ .+++++.|+.|++||+.+++.+..+..|..+|.+++|+|+++ +++++.||.|++|++.....
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 4 689999999999999999999999999999999999999998 66799999999999865433
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.8e-42 Score=315.76 Aligned_cols=286 Identities=19% Similarity=0.179 Sum_probs=225.8
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCe--EEEeecccCCeEEEEECC-CCCeeEEeeCCCeEEE
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDW--IGTFEGHKGAVWSCCLDT-NALRAASASADFSAKV 87 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~--~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~v 87 (349)
...+|...|+||+|+|. ++++||+|+.||+|++|+..+++. +..+.+|.+.|++++|+| ++.+|+|||.|++|++
T Consensus 114 ~~~~~~~~V~~l~~~P~--~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPT--HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp EEEECSSCEEEEEECSS--CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cCCCCCCCEEEEEEeCC--CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 34689999999999983 456899999999999999877653 455678999999999997 6889999999999999
Q ss_pred EECCCCCEEEEec---cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEe
Q 018860 88 WDALTGDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC 164 (349)
Q Consensus 88 Wd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 164 (349)
||+.++....... +...+.+++|+|++.+|++|+.|+.|++||+... ....+..|...|.+++|+|.+..+++++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~--~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK--ELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC--BCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc--eeEEEecccceEEeeeecCCCceEEEEe
Confidence 9998765443333 2335788999999999999999999999998642 3456678899999999999888899999
Q ss_pred eCCCeEEEEECCCCceEEee----cCCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCC-------ceEE
Q 018860 165 TDMGGVRLWDVRSGEIVQTL----ETKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPC-------TIES 232 (349)
Q Consensus 165 ~~dg~v~vwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~-------~~~~ 232 (349)
+.|++|++||+++++....+ .+..+|.+++|+|++.+|++ +.|+.|++||++++.....+.... ....
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE
Confidence 99999999999887644333 35568999999999987755 569999999999876655442211 1223
Q ss_pred eeecCCCCCEEEEe------------cCCCeEEEEeCCCCcEEEEe-cCCCcceeEE-EEccCCCeEEEecCCCCEEEec
Q 018860 233 ASLEPKYGNKFVAG------------GEDMWVRFFDFHTGNEIACN-KGHHGPVHCV-RFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 233 ~~~~~~~~~~~~~~------------~~d~~i~v~d~~~~~~~~~~-~~h~~~i~~l-~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
..+.|. +..++++ ..++.|++||..+++.+..+ .+|...|.++ +|+|+|.+|++|+ |++|+||+
T Consensus 350 ~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~ 427 (435)
T 4e54_B 350 AAWHPR-YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWS 427 (435)
T ss_dssp CEECSS-SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECC
T ss_pred EEEcCC-CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEE
Confidence 344443 3333333 24568999999999988776 4688889987 6999999999887 88999999
Q ss_pred CCCC
Q 018860 299 TGPV 302 (349)
Q Consensus 299 ~~~~ 302 (349)
+...
T Consensus 428 ~~~g 431 (435)
T 4e54_B 428 QQEA 431 (435)
T ss_dssp CC--
T ss_pred CCcC
Confidence 8644
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.7e-39 Score=309.67 Aligned_cols=301 Identities=27% Similarity=0.456 Sum_probs=249.4
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEEC
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDA 90 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~ 90 (349)
.+.+|..+|.++.|+| ++++|++++.|+++++|+. +++.+..+.+|...|++++|+|++.+|++++.|++|++||.
T Consensus 257 ~~~~~~~~v~~v~~~~---d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~ 332 (577)
T 2ymu_A 257 TLTGHSSSVNGVAFRP---DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 332 (577)
T ss_dssp EECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEecCCCCEEEEEEcC---CCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 4579999999999997 8999999999999999996 46788899999999999999999999999999999999998
Q ss_pred CCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 018860 91 LTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
.+........|...|.+++|+|++++|++++.|+.+++|+... .....+..|...|.+++|+|++. ++++++.|+.|
T Consensus 333 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~--~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~v 409 (577)
T 2ymu_A 333 NGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTV 409 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC--CEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEE
T ss_pred CCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC--CEEEEecCCCCCeEEEEECCCCC-EEEEEeCCCEE
Confidence 7665555556888999999999999999999999999999642 33455677889999999987654 55677788999
Q ss_pred EEEECCCCceEEeec-CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecC
Q 018860 171 RLWDVRSGEIVQTLE-TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGE 248 (349)
Q Consensus 171 ~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (349)
++||. +++.+..+. +...+.+++|+|++++|++ +.|++|++||...........+...+..++|+|. ++++++++.
T Consensus 410 ~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd-~~~las~~~ 487 (577)
T 2ymu_A 410 KLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD-GQTIASASD 487 (577)
T ss_dssp EEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTT-SCEEEEEET
T ss_pred EEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCC-CCEEEEEeC
Confidence 99995 556666665 4568999999999988765 5699999999765444444455667889999984 899999999
Q ss_pred CCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCCCCCcceee-eccCeeeeeEeChh
Q 018860 249 DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETL-TANGTIGKVKVTAD 324 (349)
Q Consensus 249 d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 324 (349)
|+.|++||. +++.+..+.+|..+|++++|+|++++|++++.||+|++||.... ....+ .+.+.+..+.++++
T Consensus 488 d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~---~~~~~~~h~~~v~~~~fs~d 560 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---LLQTLTGHSSSVWGVAFSPD 560 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC---EEEEEECCSSCEEEEEECTT
T ss_pred CCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCC---EEEEEcCCCCCEEEEEEcCC
Confidence 999999995 67888899999999999999999999999999999999996321 11122 23455556666664
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2e-40 Score=290.64 Aligned_cols=246 Identities=18% Similarity=0.295 Sum_probs=194.6
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC--CCeEEEeecccCCeEEEEECCC--CCeeEEeeCCCeE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET--GDWIGTFEGHKGAVWSCCLDTN--ALRAASASADFSA 85 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~--~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i 85 (349)
.++.||.++|.+++|+| +|++|++|+.|++|++|+..+ .+++.++.+|.++|++++|+++ +.+|+||+.|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~---~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDY---YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp EECCSCSSCEEEEEECT---TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eeccCCcCceEEEEECC---CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 45789999999999997 899999999999999999864 3678999999999999999763 8899999999999
Q ss_pred EEEECCCCC--EEEEe-ccCCeEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCCC-CCceeccCCCCeEEEEEecCC--
Q 018860 86 KVWDALTGD--VLHSF-EHKHIVRACSFSED--THLLLTGGMEKILRIFDLNRPDA-PPREVDRSPGSVRTVAWLHSD-- 157 (349)
Q Consensus 86 ~vWd~~~~~--~~~~~-~~~~~v~~~~~s~~--~~~l~s~~~d~~i~lwd~~~~~~-~~~~~~~~~~~i~~~~~~~~~-- 157 (349)
+|||+.+++ .+..+ .|...|.+++|+|+ +.+|++++.|++|++||+..... ....+..|...+.+++|+|..
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 999998774 34444 48889999999997 89999999999999999976532 234567888899999998753
Q ss_pred ----------CeEEEEeeCCCeEEEEECCCCc----eEEeec-CCCCeeEEEEcCCC---cEE-EEecCCeEEEEecCCc
Q 018860 158 ----------QTILSTCTDMGGVRLWDVRSGE----IVQTLE-TKSPVTSAEVSQDG---RYI-TTADGSTVKFWDANHF 218 (349)
Q Consensus 158 ----------~~~l~~~~~dg~v~vwd~~~~~----~~~~~~-~~~~v~~~~~~~~~---~~l-~~~~d~~i~iwd~~~~ 218 (349)
+.+|++++.|++|++||+++++ ....+. +...|.+++|+|++ .+| +++.|++|++||++
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~-- 237 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD-- 237 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES--
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC--
Confidence 4578888888999999987765 344454 34567777777763 333 23345555555543
Q ss_pred eeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCc---EEEEe--cCCCcceeEEEEccCCCeEEEecCCCC
Q 018860 219 GLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN---EIACN--KGHHGPVHCVRFSPGGESYASGSEDGT 293 (349)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~---~~~~~--~~h~~~i~~l~~sp~~~~l~sgs~Dg~ 293 (349)
+.. ....+ ..|...|++++|+|++++||+++.||+
T Consensus 238 ----------------------------------------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~ 277 (297)
T 2pm7_B 238 ----------------------------------------NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (297)
T ss_dssp ----------------------------------------STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSC
T ss_pred ----------------------------------------CCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCc
Confidence 321 11112 457889999999999999999999999
Q ss_pred EEEecCC
Q 018860 294 IRIWQTG 300 (349)
Q Consensus 294 v~vW~~~ 300 (349)
|++|+..
T Consensus 278 v~lw~~~ 284 (297)
T 2pm7_B 278 VTLWKEN 284 (297)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999864
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-41 Score=307.29 Aligned_cols=285 Identities=19% Similarity=0.244 Sum_probs=242.5
Q ss_pred CCCceeeEEEeecCCCcc-EEEEE----------ecCCCeEEEeCCCCC---eEEEeecccCCeEEEEECCCCCeeEEee
Q 018860 15 HSRPVVDLFYSPITPDGF-FLISA----------SKDSSPMLRNGETGD---WIGTFEGHKGAVWSCCLDTNALRAASAS 80 (349)
Q Consensus 15 h~~~v~~~~fs~~~~~~~-~l~s~----------s~d~~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s 80 (349)
+...|.+++|+| +|+ +|++| +.|+.+++|+..+++ .+..+ .|...|.+++|++++.+|++++
T Consensus 11 ~~~~v~~~~~sp---~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~ 86 (416)
T 2pm9_A 11 EFSRTATFAWSH---DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGAL 86 (416)
T ss_dssp EEEESCBCCBCS---SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEE
T ss_pred hhhhcceEeeCC---CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEc
Confidence 345788999997 776 99999 899999999998775 34444 5889999999999999999999
Q ss_pred CCCeEEEEECCC----CCEEEEec-cCCeEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCC------CCC--ceeccCCC
Q 018860 81 ADFSAKVWDALT----GDVLHSFE-HKHIVRACSFSED-THLLLTGGMEKILRIFDLNRPD------APP--REVDRSPG 146 (349)
Q Consensus 81 ~D~~i~vWd~~~----~~~~~~~~-~~~~v~~~~~s~~-~~~l~s~~~d~~i~lwd~~~~~------~~~--~~~~~~~~ 146 (349)
.|+.|++||+.+ .+.+..+. |...|++++|+|+ +++|++++.|+.|++||+.... ... .....|..
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 166 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD 166 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence 999999999987 34565554 8889999999998 8999999999999999998654 211 12356788
Q ss_pred CeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-------CCCeeEEEEcCCC-cEE-EEecCC---eEEEEe
Q 018860 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-------KSPVTSAEVSQDG-RYI-TTADGS---TVKFWD 214 (349)
Q Consensus 147 ~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-------~~~v~~~~~~~~~-~~l-~~~~d~---~i~iwd 214 (349)
.+.+++|+|.++.++++++.+|.|++||+++++.+..+.. ...+.++.|+|++ .++ +++.++ .|++||
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD 246 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe
Confidence 9999999988778888888899999999999998888765 4679999999997 455 455677 999999
Q ss_pred cCCc-eeeEEEc--CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCC-CeEEEecC
Q 018860 215 ANHF-GLVKSYN--MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGG-ESYASGSE 290 (349)
Q Consensus 215 ~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~-~~l~sgs~ 290 (349)
+++. .++..+. +...+..++|+|.++++|++++.|+.|++||+.+++.+..+.+|..+|.+++|+|++ .+|++++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 247 LRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF 326 (416)
T ss_dssp TTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS
T ss_pred CCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec
Confidence 9985 4555554 556788999998668999999999999999999999999999999999999999998 89999999
Q ss_pred CCCEEEecCCCCC
Q 018860 291 DGTIRIWQTGPVT 303 (349)
Q Consensus 291 Dg~v~vW~~~~~~ 303 (349)
||.|++|++....
T Consensus 327 d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 327 DNKIEVQTLQNLT 339 (416)
T ss_dssp SSEEEEEESCCCC
T ss_pred CCcEEEEEccCCC
Confidence 9999999987654
No 31
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=296.73 Aligned_cols=293 Identities=20% Similarity=0.241 Sum_probs=241.8
Q ss_pred ceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEee-------------cccCCeEEEEECC-CCC
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE-------------GHKGAVWSCCLDT-NAL 74 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~-------------~h~~~v~~~~~~~-~~~ 74 (349)
..++.+|.++|.+++|+| .++++|++|+.||.+++|+..+++....+. +|...|.+++|++ ++.
T Consensus 36 ~~~~~~h~~~v~~~~~s~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEP--VEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp EEECCCCSSCEEEEEECT--TTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred eeeeeccCCcEEEEEEec--CCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 345689999999999985 268899999999999999998876655543 6999999999999 778
Q ss_pred eeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCC---CCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEE
Q 018860 75 RAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSED---THLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTV 151 (349)
Q Consensus 75 ~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~ 151 (349)
+|++++.|+.|++||+.+++....+.+...+.+++++|. +.++++++.|+.|++||+.... ....+..|...+.++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~~~~~~~~~~v~~~ 192 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS-CSHILQGHRQEILAV 192 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC-CCEEECCCCSCEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc-eeeeecCCCCcEEEE
Confidence 999999999999999999999999999999999999984 4599999999999999997653 355677888999999
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECCCCc-eEEee----------------cCCCCeeEEEEcCCCcEEEE-ecCCeEEEE
Q 018860 152 AWLHSDQTILSTCTDMGGVRLWDVRSGE-IVQTL----------------ETKSPVTSAEVSQDGRYITT-ADGSTVKFW 213 (349)
Q Consensus 152 ~~~~~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~----------------~~~~~v~~~~~~~~~~~l~~-~~d~~i~iw 213 (349)
+|+|.+..++++++.||.|++||++++. ....+ .+...+.+++|+|++.++++ +.|+.|++|
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 9999888788889999999999998765 33332 23457999999999987655 569999999
Q ss_pred ecCCceeeEEEcCC-----CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEe
Q 018860 214 DANHFGLVKSYNMP-----CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASG 288 (349)
Q Consensus 214 d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sg 288 (349)
|+++.......... ...............+++++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++|
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 352 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSG 352 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEE
Confidence 99887654332211 1111222333345678888899999999999999999999999999999999999999999
Q ss_pred cCCCCEEEecCCCCCC
Q 018860 289 SEDGTIRIWQTGPVTN 304 (349)
Q Consensus 289 s~Dg~v~vW~~~~~~~ 304 (349)
+.||.|++|++.....
T Consensus 353 ~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 353 SRDCNILAWVPSLYEP 368 (408)
T ss_dssp ETTSCEEEEEECC---
T ss_pred CCCCeEEEEeCCCCCc
Confidence 9999999999876543
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.2e-40 Score=297.11 Aligned_cols=284 Identities=14% Similarity=0.193 Sum_probs=236.2
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC--eEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEE
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW 88 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vW 88 (349)
++..|.++|.+++|+| ++++|++++.|+.+++|+..+++ .+..+.+|...|.+++|++++.+|++++.|+.|++|
T Consensus 3 ~~~~~~~~i~~~~~s~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNK---DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EEESCSSCCCEEEECT---TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eecccCCCeEEEEECC---CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 4567999999999997 89999999999999999998887 889999999999999999999999999999999999
Q ss_pred ECCCCCEEEE---eccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCC---CCceeccCCCCeEEEEEecCCCeEEE
Q 018860 89 DALTGDVLHS---FEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA---PPREVDRSPGSVRTVAWLHSDQTILS 162 (349)
Q Consensus 89 d~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~l~ 162 (349)
|+.+++.... ..|...|.+++|+|++++|++++.|+.|++||+..... .......|...+.++.|+|++ .+++
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~ 158 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS-VLLA 158 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS-SEEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC-CEEE
Confidence 9988875444 34788999999999999999999999999999976542 122335678899999998755 5666
Q ss_pred EeeCCCeEEEEECC------------------CCceEEeec-CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeE
Q 018860 163 TCTDMGGVRLWDVR------------------SGEIVQTLE-TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVK 222 (349)
Q Consensus 163 ~~~~dg~v~vwd~~------------------~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~ 222 (349)
+++.||.|++||++ .++.+..+. +...+.++.|+|++.++++ +.|+.|++||+++.+++.
T Consensus 159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 77788999999954 567777775 4567999999999977655 569999999999988887
Q ss_pred EEcCC-CceEEeeecCCCCCEEEEecCCCeEEEEeCCC--CcE--------------------------------E----
Q 018860 223 SYNMP-CTIESASLEPKYGNKFVAGGEDMWVRFFDFHT--GNE--------------------------------I---- 263 (349)
Q Consensus 223 ~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~--~~~--------------------------------~---- 263 (349)
.+... ..+..++|.|. +.+++++ .|+.|++|++.+ ++. .
T Consensus 239 ~~~~~~~~v~~~~~~~~-~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (372)
T 1k8k_C 239 TLASETLPLLAVTFITE-SSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAA 316 (372)
T ss_dssp EEECSSCCEEEEEEEET-TEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-------
T ss_pred EEccCCCCeEEEEEecC-CCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcc
Confidence 77654 46788899874 5555555 999999999987 421 0
Q ss_pred --EEe-cCCCcceeEEEEc-cCC---CeEEEecCCCCEEEecCC
Q 018860 264 --ACN-KGHHGPVHCVRFS-PGG---ESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 264 --~~~-~~h~~~i~~l~~s-p~~---~~l~sgs~Dg~v~vW~~~ 300 (349)
..+ .+|..+|++++|+ +++ .+|+||+.||+|++|++.
T Consensus 317 ~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 317 AGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp --CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 222 4899999999966 566 899999999999999874
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-39 Score=297.47 Aligned_cols=285 Identities=14% Similarity=0.231 Sum_probs=239.3
Q ss_pred eeeccCCCceeeEEEeecCCCcc-EEEEEecCCCeEEEeC----CCCC------eEEEeec----------ccCCeEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGF-FLISASKDSSPMLRNG----ETGD------WIGTFEG----------HKGAVWSCC 68 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~-~l~s~s~d~~i~iw~~----~~~~------~~~~~~~----------h~~~v~~~~ 68 (349)
+....|.++|.+++|+| +|+ +|++|+.|+.+++|+. .+++ ....+.. |...|.+++
T Consensus 39 ~~~~~~~~~v~~~~~s~---~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 39 LKEIVKLDNIVSSTWNP---LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp CEEEEECSCCSEEEECS---SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred eeeeeccCceEEEEECC---CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 33456779999999997 888 9999999999999999 8887 4555554 788999999
Q ss_pred ECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCC-----------
Q 018860 69 LDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA----------- 136 (349)
Q Consensus 69 ~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~----------- 136 (349)
|+|++.+|++++.|+.|++|| .+++.+..+. |...|.+++|+|++++|++++.|+.|++||+.....
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 194 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGG 194 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----
T ss_pred EcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCc
Confidence 999999999999999999999 5666666665 888999999999999999999999999999864321
Q ss_pred --------------------------------------------CCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEE
Q 018860 137 --------------------------------------------PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172 (349)
Q Consensus 137 --------------------------------------------~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~v 172 (349)
....+..|...+.+++|+|.+. ++++++.+|.|++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i 273 (425)
T 1r5m_A 195 SSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRI 273 (425)
T ss_dssp -----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEE
T ss_pred cceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEE
Confidence 0112345777899999998665 5667777899999
Q ss_pred EECCCCceEEeec-CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcC-CCceEEeeecCCCCCEEEEecCCC
Q 018860 173 WDVRSGEIVQTLE-TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDM 250 (349)
Q Consensus 173 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~ 250 (349)
||+++++.+..+. +...+.++.++|++.+++++.|+.|++||+++...+..+.. ...+..++++|. ++++++++.|+
T Consensus 274 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg 352 (425)
T 1r5m_A 274 WHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQD-GQKYAVAFMDG 352 (425)
T ss_dssp ECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTT-SSEEEEEETTS
T ss_pred EECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCC-CCEEEEEECCC
Confidence 9999998887776 45689999999999556667899999999999888877765 456788899985 88999999999
Q ss_pred eEEEEeCCCCc--------------------EEEEecCCCc--ceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 251 WVRFFDFHTGN--------------------EIACNKGHHG--PVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 251 ~i~v~d~~~~~--------------------~~~~~~~h~~--~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
.|++||+.+++ .+..+.+|.. .|.+++|+|++++|++++.||.|++|++.
T Consensus 353 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 353 QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 99999999888 7888899976 99999999999999999999999999974
No 34
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.4e-39 Score=295.60 Aligned_cols=277 Identities=18% Similarity=0.271 Sum_probs=232.7
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEee--cccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCE
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDV 95 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~ 95 (349)
..+.|+||+ +++|++| .|++|++||..++++++.++ +|...|++|+|++++.+|++|+.|++|+|||+.+++.
T Consensus 107 y~~~l~wS~----~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~ 181 (420)
T 4gga_A 107 YLNLVDWSS----GNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 181 (420)
T ss_dssp TCBCEEECT----TSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cceeEEECC----CCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE
Confidence 456788985 3467666 59999999999999887775 5778899999999999999999999999999999998
Q ss_pred EEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEE
Q 018860 96 LHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174 (349)
Q Consensus 96 ~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd 174 (349)
+..+. |...+.++++ ++.++++|+.|+.+++||..........+..|...+..+.|.+.+. ++++++.|+.+++||
T Consensus 182 ~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 182 LRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWP 258 (420)
T ss_dssp EEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred EEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC-eeeeeeccccceEEe
Confidence 88875 7778888776 5679999999999999999876665566788999999999887654 566777789999999
Q ss_pred CCCCce----EEee-cCCCCeeEEEEcCCC-cEEEE---ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEE
Q 018860 175 VRSGEI----VQTL-ETKSPVTSAEVSQDG-RYITT---ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA 245 (349)
Q Consensus 175 ~~~~~~----~~~~-~~~~~v~~~~~~~~~-~~l~~---~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
..+++. +... .+...|.++.++|++ .++++ +.|++|++||++++.+...+.....+..+.+.+. ++.+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~-~~~lv~ 337 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELIS 337 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETT-TTEEEE
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCC-CCeEEE
Confidence 987653 2222 345689999999976 44432 2489999999999999999988888899999986 555554
Q ss_pred e--cCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCCC
Q 018860 246 G--GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVT 303 (349)
Q Consensus 246 ~--~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~ 303 (349)
+ ..|+.|++||+.+++.+..+.+|.++|++++|+|+|++|+|||.|++|+|||+....
T Consensus 338 ~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 338 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred EEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 3 379999999999999999999999999999999999999999999999999986543
No 35
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.9e-39 Score=292.94 Aligned_cols=284 Identities=15% Similarity=0.208 Sum_probs=241.3
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeec-ccCCeEEEEECCCCCeeEEeeCCCeEEEEECC
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEG-HKGAVWSCCLDTNALRAASASADFSAKVWDAL 91 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~ 91 (349)
.+|.+.+.+..+++ ++..+++++.|+.+++|+..+++....+.. |...|.+++|++++.+|++|+.||.|++||+.
T Consensus 88 ~~~~~~~~~~~~~~---s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 88 PGIIDDYYLNLLDW---SNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp TTCCCCTTCBCEEE---CTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCcCCceEEEEee---cCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 47777655443333 234588899999999999999998888876 89999999999999999999999999999999
Q ss_pred CCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 018860 92 TGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 92 ~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
+++.+..+. |...|.+++| +++++++++.|+.|++||+.........+..|...+.++.|+| ++.++++++.||.|
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v 241 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVV 241 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeE
Confidence 999888874 8889999999 5679999999999999999865555667788999999999988 45567778888999
Q ss_pred EEEECCCCceEEeec-CCCCeeEEEEcCCC-cEEEEe---cCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEE
Q 018860 171 RLWDVRSGEIVQTLE-TKSPVTSAEVSQDG-RYITTA---DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA 245 (349)
Q Consensus 171 ~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
++||+++++.+..+. +...+.+++|+|++ .+++++ .|+.|++||+++..++..+.....+..++|+|. +..+++
T Consensus 242 ~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~ 320 (401)
T 4aez_A 242 QIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPH-SKEIMS 320 (401)
T ss_dssp EEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSS-SSEEEE
T ss_pred EEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCC-CCeEEE
Confidence 999999998887775 45689999999976 455544 489999999999999999888888999999985 777877
Q ss_pred --ecCCCeEEEEeCCCCcEEE--EecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCCC
Q 018860 246 --GGEDMWVRFFDFHTGNEIA--CNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVT 303 (349)
Q Consensus 246 --~~~d~~i~v~d~~~~~~~~--~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~ 303 (349)
|+.|+.|++||+.+++... .+.+|...|.+++|+|++++|++++.||+|++|++....
T Consensus 321 ~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 321 THGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred EeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 5589999999999876544 467999999999999999999999999999999986543
No 36
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.1e-40 Score=293.87 Aligned_cols=288 Identities=11% Similarity=0.233 Sum_probs=231.9
Q ss_pred eeeccCCCceeeEEEeecCCC-ccEEEEEecCCCeEEEeCCCCCeEEEeec-----ccCCeEEEEECCC----CCeeEEe
Q 018860 10 LVCHGHSRPVVDLFYSPITPD-GFFLISASKDSSPMLRNGETGDWIGTFEG-----HKGAVWSCCLDTN----ALRAASA 79 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~-~~~l~s~s~d~~i~iw~~~~~~~~~~~~~-----h~~~v~~~~~~~~----~~~l~s~ 79 (349)
....||.++|.+++|+|.+++ ...+++++.++.+++|+..+++.+..+.. |...|.+++|+++ +.+|++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345699999999999985333 34566666778999999998887777765 4477999999998 6799999
Q ss_pred eCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCCCCcee---ccCCCCeEEEEEe
Q 018860 80 SADFSAKVWDALTGDVLHSFE-HKHIVRACSFSE-DTHLLLTGGMEKILRIFDLNRPDAPPREV---DRSPGSVRTVAWL 154 (349)
Q Consensus 80 s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~---~~~~~~i~~~~~~ 154 (349)
+.|+.|++||+.+++.+..+. |...|.+++|+| ++++|++++.|+.|++||+...+. ...+ ..|...+.+++|+
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL-VAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE-EEEECSTTSCSSCEEEEEEC
T ss_pred cCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE-EEEecccccccCceeEEEEC
Confidence 999999999999999988886 889999999999 999999999999999999976432 2333 5788899999998
Q ss_pred cCCCeEEEEeeCCCeEEEEECCCCceEEeec-----------------------------CCCCeeEEEEcCCCcEEEEe
Q 018860 155 HSDQTILSTCTDMGGVRLWDVRSGEIVQTLE-----------------------------TKSPVTSAEVSQDGRYITTA 205 (349)
Q Consensus 155 ~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-----------------------------~~~~v~~~~~~~~~~~l~~~ 205 (349)
|.+. ++++++.||.|++||+++++....+. +...+.++.|+ ...+++++
T Consensus 171 ~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~ 248 (366)
T 3k26_A 171 LLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKS 248 (366)
T ss_dssp TTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEEC
T ss_pred CCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEe
Confidence 8554 56677778999999999876544332 55678999998 33445556
Q ss_pred cCCeEEEEecCCcee--------------eEEEc-CCCceEEeeecCCC-CCEEEEecCCCeEEEEeCCCCc----EEEE
Q 018860 206 DGSTVKFWDANHFGL--------------VKSYN-MPCTIESASLEPKY-GNKFVAGGEDMWVRFFDFHTGN----EIAC 265 (349)
Q Consensus 206 ~d~~i~iwd~~~~~~--------------~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~d~~i~v~d~~~~~----~~~~ 265 (349)
.|+.|++||+++... +..+. +...+..++|.|.. ++++++++.|+.|++||+.+++ ....
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 328 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTT 328 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEE
T ss_pred cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceE
Confidence 799999999987533 33333 23345667777742 7899999999999999999875 3446
Q ss_pred ecCC--CcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 266 NKGH--HGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 266 ~~~h--~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
+.+| ..+|.+++|+|++++|++|+.||.|++||+.
T Consensus 329 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 329 LTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 7777 7999999999999999999999999999974
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-41 Score=306.74 Aligned_cols=284 Identities=15% Similarity=0.205 Sum_probs=238.0
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC----CCeEEEeecccCCeEEEEECCC-CCeeEEeeCCCeEEE
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET----GDWIGTFEGHKGAVWSCCLDTN-ALRAASASADFSAKV 87 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~v 87 (349)
.+|..+|.+++|+| ++++|++|+.|+.+++|+..+ .+.+..+.+|...|.+++|+|+ +.+|++++.|+.|++
T Consensus 64 ~~~~~~v~~~~~s~---~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i 140 (416)
T 2pm9_A 64 LQVDSKFNDLDWSH---NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFI 140 (416)
T ss_dssp CCCSSCEEEEEECS---SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEB
T ss_pred EecCCceEEEEECC---CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEE
Confidence 46999999999987 899999999999999999887 4588899999999999999998 899999999999999
Q ss_pred EECCCCC------EEEEe----ccCCeEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCCCCCceeccC------CCCeEE
Q 018860 88 WDALTGD------VLHSF----EHKHIVRACSFSED-THLLLTGGMEKILRIFDLNRPDAPPREVDRS------PGSVRT 150 (349)
Q Consensus 88 Wd~~~~~------~~~~~----~~~~~v~~~~~s~~-~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~------~~~i~~ 150 (349)
||+.+++ ....+ .|...|.+++|+|+ +.+|++++.|+.|++||+..... ...+..+ ...+.+
T Consensus 141 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 141 WDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE-VIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp CBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE-EEEECCCCCSSCCCCCEEE
T ss_pred EECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc-ceEEeccccccccCCceEE
Confidence 9998876 33322 47789999999998 78999999999999999976432 2223333 678999
Q ss_pred EEEecCCCeEEEEeeCCC---eEEEEECCCC-ceEEeec--CCCCeeEEEEcC-CCcEEE-EecCCeEEEEecCCceeeE
Q 018860 151 VAWLHSDQTILSTCTDMG---GVRLWDVRSG-EIVQTLE--TKSPVTSAEVSQ-DGRYIT-TADGSTVKFWDANHFGLVK 222 (349)
Q Consensus 151 ~~~~~~~~~~l~~~~~dg---~v~vwd~~~~-~~~~~~~--~~~~v~~~~~~~-~~~~l~-~~~d~~i~iwd~~~~~~~~ 222 (349)
++|+|.+..++++++.++ .|++||++++ +.+..+. +...+.++.|+| ++.+++ ++.|+.|++||+++.+++.
T Consensus 220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS 299 (416)
T ss_dssp EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE
T ss_pred EEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce
Confidence 999998877888888888 9999999986 5666665 556899999999 777665 5569999999999988887
Q ss_pred EEcC-CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEe-----------------------------------
Q 018860 223 SYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACN----------------------------------- 266 (349)
Q Consensus 223 ~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~----------------------------------- 266 (349)
.+.. ...+..++|+|....++++++.|+.|++||+.+.......
T Consensus 300 ~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (416)
T 2pm9_A 300 QFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAP 379 (416)
T ss_dssp EEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCC
T ss_pred eecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCC
Confidence 7754 4567789999864489999999999999999876532211
Q ss_pred cCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 267 KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 267 ~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
..|..++.+++|+|+|++|++|+.||+|+||++.
T Consensus 380 ~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 380 TWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp STTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred ccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 1167788899999999999999999999999975
No 38
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=291.00 Aligned_cols=244 Identities=18% Similarity=0.201 Sum_probs=205.1
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEE----eecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGT----FEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~----~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
.|..+|.+++|+| ++ +|++|+.||+|++||..+++.+.. +.+|...|++++|+|++++|+||+.|++|++||
T Consensus 80 ~~~~~v~~~~~s~---d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 80 QTEAGVADLTWVG---ER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWD 155 (344)
T ss_dssp EESSCEEEEEEET---TT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccCCCEEEEEEeC---CC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 4677899999997 54 688999999999999988875443 458999999999999999999999999999999
Q ss_pred CCCCCEEEEec-cCCeEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCCCCce-eccCCCCeEEEEEecCCCeEEEEeeC
Q 018860 90 ALTGDVLHSFE-HKHIVRACSFSEDTH-LLLTGGMEKILRIFDLNRPDAPPRE-VDRSPGSVRTVAWLHSDQTILSTCTD 166 (349)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~l~~~~~ 166 (349)
+.+++++..+. |...|++++|+|++. +|++++.|++|++||+.+.+..... ...+...+.+++|+|.++.++++++.
T Consensus 156 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred CCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 99999998886 889999999999874 7899999999999999765432221 13344568999999989999999999
Q ss_pred CCeEEEEECCCCceEEeecC-CCCeeEEEEcCCC-cEE-EEecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEE
Q 018860 167 MGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDG-RYI-TTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKF 243 (349)
Q Consensus 167 dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~-~~l-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (349)
||+|++||+++++++..+.. ...|.+++|+|++ ++| +++.|++|++||+++.++.+...+...+.+++|+|....+|
T Consensus 236 dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~ll 315 (344)
T 4gqb_B 236 NGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLL 315 (344)
T ss_dssp TSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEE
T ss_pred CCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEE
Confidence 99999999999999888875 5689999999997 455 56779999999999998887777777899999999766778
Q ss_pred EEecCCCeEEEEeCCCCc
Q 018860 244 VAGGEDMWVRFFDFHTGN 261 (349)
Q Consensus 244 ~~~~~d~~i~v~d~~~~~ 261 (349)
++++.|++|++|++.+..
T Consensus 316 as~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 316 TTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEETTSCEEEEECCC--
T ss_pred EEEcCCCeEEEEECCCCC
Confidence 899999999999997644
No 39
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=279.81 Aligned_cols=276 Identities=17% Similarity=0.232 Sum_probs=227.9
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEee--cccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCE
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDV 95 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~ 95 (349)
..++|+||+ ++ +|++| .|++|++||..++++++.++ +|...|.+++|++++++|+||+.|++|++||+.++++
T Consensus 27 y~~~l~WS~---~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 27 YLNLVDWSS---GN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp TCBCEEECT---TS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred cceEEEECC---CC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee
Confidence 357899986 44 66655 69999999999999888776 5778899999999999999999999999999999998
Q ss_pred EEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEE
Q 018860 96 LHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174 (349)
Q Consensus 96 ~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd 174 (349)
+..+. |...+.++ ++++..+++++.++.+++|+..........+.+|...+..+.+.+.+. ++++++.||+|++||
T Consensus 102 ~~~~~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd 178 (318)
T 4ggc_A 102 LRNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWP 178 (318)
T ss_dssp EEEEECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEE
T ss_pred EEEecCccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC-EEEEEecCcceeEEE
Confidence 88775 66666654 456789999999999999998776665566788888999999876554 566778889999999
Q ss_pred CCCCceEE-----eecCCCCeeEEEEcCCCc-EEE--E-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEE
Q 018860 175 VRSGEIVQ-----TLETKSPVTSAEVSQDGR-YIT--T-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA 245 (349)
Q Consensus 175 ~~~~~~~~-----~~~~~~~v~~~~~~~~~~-~l~--~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
+++++... ...+...+..+.++|++. ++. + +.+++|++||.+.............+....+.+. +..+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~ 257 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELIS 257 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETT-TTEEEE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeeccc-ccceEE
Confidence 99875422 223456788999998764 332 2 3478999999999888888888888888889886 445443
Q ss_pred --ecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 246 --GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 246 --~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
++.|+.|++||+.+++.+..+.+|.++|++++|+|++++|+|||.||+|+|||+...
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 447999999999999999999999999999999999999999999999999998544
No 40
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.3e-39 Score=294.81 Aligned_cols=267 Identities=22% Similarity=0.349 Sum_probs=224.9
Q ss_pred eEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEEC
Q 018860 53 WIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131 (349)
Q Consensus 53 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~ 131 (349)
....+.+|..+|++++|+|++.+|+||+.|++|+|||+.+++..+.+. |...|.+++|+|++++|++|+.|++|++||+
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 356788999999999999999999999999999999999999888876 8889999999999999999999999999999
Q ss_pred CCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCe
Q 018860 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGST 209 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~ 209 (349)
.... ....+.+|...|.++.|+|.+. ++++++.|++|++||+++++++..+.. ...+.++.++|++.++++ +.|++
T Consensus 180 ~~~~-~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 180 QGFE-CIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp TSSC-EEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCc-eeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 6543 3455678889999999987654 566778889999999999999888865 457999999999987755 56999
Q ss_pred EEEEecCCceeeEEEc-CCCceEEeeecCCC-------------------CCEEEEecCCCeEEEEeCCCCcEEEEecCC
Q 018860 210 VKFWDANHFGLVKSYN-MPCTIESASLEPKY-------------------GNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269 (349)
Q Consensus 210 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~-------------------~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h 269 (349)
|++||+++..+...+. +...+.+++|.|.. +.++++|+.|+.|++||+.+++.+..+.+|
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 9999999888777664 34557788888742 568999999999999999999999999999
Q ss_pred CcceeEEEEccCCCeEEEecCCCCEEEecCCCCCCCcceee-eccCeeeeeEeCh
Q 018860 270 HGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETL-TANGTIGKVKVTA 323 (349)
Q Consensus 270 ~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~~~~~~~~-~~~~~~~~~~~~~ 323 (349)
..+|.+++|+|++++|++|+.||+|++||+...... ..+ .+.+.+..+.+.+
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~--~~~~~h~~~v~~l~~~~ 390 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM--KTLNAHEHFVTSLDFHK 390 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC--EEEECCSSCEEEEEECS
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE--EEEcCCCCcEEEEEEcC
Confidence 999999999999999999999999999998654332 122 2234444555544
No 41
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-40 Score=303.28 Aligned_cols=279 Identities=15% Similarity=0.185 Sum_probs=223.3
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC---CC---eEEEeecccCCeEEEEECCCCCeeEEeeCCCeEE
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET---GD---WIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~---~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 86 (349)
.+|.++|++++|+|. ++++|++|+.|++|++|+..+ +. ....+ +|...|.+++|++++.+|++|+.|++|+
T Consensus 60 ~~h~~~V~~~~~s~~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSPG--ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEECS--SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCC--CCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 789999999999952 688999999999999999765 33 23333 5999999999999999999999999999
Q ss_pred EEECC---CCCEEEEec-------------cCCeEEEEE--EcCCCCEEEEEeCCCeEEEEECCCCCCCCceecc--CCC
Q 018860 87 VWDAL---TGDVLHSFE-------------HKHIVRACS--FSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDR--SPG 146 (349)
Q Consensus 87 vWd~~---~~~~~~~~~-------------~~~~v~~~~--~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~--~~~ 146 (349)
+||+. +++....+. +...+.++. +++++.+|++|+.|+.|++||+..... ...+.. |..
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~h~~ 215 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER-LQIIENSPRHG 215 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE-EEEEECCGGGC
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee-eEEEccCCCCC
Confidence 99984 555544332 334556655 567899999999999999999976443 334444 778
Q ss_pred CeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeec--CCCCeeEEEEc----CCCcEEEE-ecCCeEEEEecCCce
Q 018860 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE--TKSPVTSAEVS----QDGRYITT-ADGSTVKFWDANHFG 219 (349)
Q Consensus 147 ~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--~~~~v~~~~~~----~~~~~l~~-~~d~~i~iwd~~~~~ 219 (349)
.|.+++|+|. +.++++++.||.|++||+++++++..+. +..++.++.++ +++.++++ +.|+.|++||+++..
T Consensus 216 ~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 216 AVSSICIDEE-CCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp CEEEEEECTT-SCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred ceEEEEECCC-CCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 9999999876 5566778888999999999999988774 45678999665 45766655 468999999999888
Q ss_pred eeEEEcC---------------------------CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecC----
Q 018860 220 LVKSYNM---------------------------PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG---- 268 (349)
Q Consensus 220 ~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~---- 268 (349)
++..+.. ...+.++++. ++++|++|+.|+.|++||+.+++....+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 372 (437)
T 3gre_A 295 CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSLNELSSSKAVISPSRF 372 (437)
T ss_dssp EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--C
T ss_pred EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEECCCcccceEEeccccc
Confidence 7776652 1224556666 357899999999999999998887665554
Q ss_pred ---------------------------------CCcceeEEEEccC--CCeEEEecCCCCEEEec
Q 018860 269 ---------------------------------HHGPVHCVRFSPG--GESYASGSEDGTIRIWQ 298 (349)
Q Consensus 269 ---------------------------------h~~~i~~l~~sp~--~~~l~sgs~Dg~v~vW~ 298 (349)
|...|++++|+++ +.+|+||+.||+|+||+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 373 SDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred CceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 77999999999999995
No 42
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-40 Score=313.11 Aligned_cols=286 Identities=14% Similarity=0.109 Sum_probs=218.6
Q ss_pred CCCceeeEEEeecCCC------ccEEEE-------------------EecCCCeEEEeCCCCCe----EEEeecccCCeE
Q 018860 15 HSRPVVDLFYSPITPD------GFFLIS-------------------ASKDSSPMLRNGETGDW----IGTFEGHKGAVW 65 (349)
Q Consensus 15 h~~~v~~~~fs~~~~~------~~~l~s-------------------~s~d~~i~iw~~~~~~~----~~~~~~h~~~v~ 65 (349)
+.++|.+++|+|..++ +++||+ ++.|++|+||+..+++. ..++.+|.+.|+
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 5678999999985421 156655 55788999999877664 245778899999
Q ss_pred EEEECCC------CCeeEEeeCCCeEEEEECCCCCEE-----------EEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEE
Q 018860 66 SCCLDTN------ALRAASASADFSAKVWDALTGDVL-----------HSF-EHKHIVRACSFSEDTHLLLTGGMEKILR 127 (349)
Q Consensus 66 ~~~~~~~------~~~l~s~s~D~~i~vWd~~~~~~~-----------~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~ 127 (349)
+++|+|+ +.+|||++.|++|||||+.++... ..+ .|...|++++|++++ .|++|+.|++|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEE
Confidence 9999986 579999999999999999876421 233 377899999999864 899999999999
Q ss_pred EEECCCCCCCCceeccCCCCeEEEE-EecCCC-eEEEEeeCCCeEEEEECCCCceEEeecCC---CCeeEEEEcCCCcEE
Q 018860 128 IFDLNRPDAPPREVDRSPGSVRTVA-WLHSDQ-TILSTCTDMGGVRLWDVRSGEIVQTLETK---SPVTSAEVSQDGRYI 202 (349)
Q Consensus 128 lwd~~~~~~~~~~~~~~~~~i~~~~-~~~~~~-~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~l 202 (349)
+||+.+...+...+..|...|.+++ ..++++ .+|++++.|++|++||++++++...+..+ ..+.+++|+|+++.+
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSY 370 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEE
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeE
Confidence 9999866555556788999999995 334554 88899999999999999988766555432 247889999998776
Q ss_pred EE-ecCCeEEEEecCCceeeEEE-cCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCC---------------------
Q 018860 203 TT-ADGSTVKFWDANHFGLVKSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT--------------------- 259 (349)
Q Consensus 203 ~~-~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~--------------------- 259 (349)
++ +.|++|++||+++..++..+ .+...+.+++|+|. +..|++|+.|++|++||+..
T Consensus 371 ~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~-g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v 449 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL-HPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKW 449 (524)
T ss_dssp EEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS-CCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEEC
T ss_pred EEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC-CCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEe
Confidence 55 56899999999987765443 45667899999985 78999999999999997421
Q ss_pred -----------------------CcEEEEecCCCcceeEEEEccCCC---eEEEecCCCCEEEecCCCC
Q 018860 260 -----------------------GNEIACNKGHHGPVHCVRFSPGGE---SYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 260 -----------------------~~~~~~~~~h~~~i~~l~~sp~~~---~l~sgs~Dg~v~vW~~~~~ 302 (349)
+..+..+.+|..+|++|+|+|+++ +||+|+.||+||||+++..
T Consensus 450 ~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 450 DYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp BCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred ccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 111223457889999999999965 8999999999999998643
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.3e-41 Score=302.49 Aligned_cols=285 Identities=12% Similarity=0.160 Sum_probs=220.2
Q ss_pred ceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCC--CeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEE
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETG--DWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 86 (349)
+.++..|.++|++++|+| +|++|++|+.|+.|++|+..++ +.+..+.+|...|.+++|+|++.+|++++.|++|+
T Consensus 4 ~~~~~~~~~~v~~~~~s~---~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 4 SQVLHILPKPSYEHAFNS---QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAY 80 (377)
T ss_dssp EEEEEECSSCCSCCEECS---SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred ceeEecCCCcEEEEEECC---CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence 445667889999999997 8999999999999999999888 77889999999999999999999999999999999
Q ss_pred EEECCCCC---EE-EEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCC--CCceecc-CCCCeEEEEEecCCCe
Q 018860 87 VWDALTGD---VL-HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA--PPREVDR-SPGSVRTVAWLHSDQT 159 (349)
Q Consensus 87 vWd~~~~~---~~-~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~--~~~~~~~-~~~~i~~~~~~~~~~~ 159 (349)
+||+.+++ .. ....|...|.+++|+|++++|++++.|+.|++||+..... ....+.. |...+.+++|+|++ .
T Consensus 81 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 159 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN-V 159 (377)
T ss_dssp EC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS-S
T ss_pred EEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC-C
Confidence 99999876 33 3346889999999999999999999999999999986543 2445555 88999999998754 5
Q ss_pred EEEEeeCCCeEEEEECC------------------CCceEEeecCCCCeeEEEEcCCCcEEE-EecCCeEEEEecCCcee
Q 018860 160 ILSTCTDMGGVRLWDVR------------------SGEIVQTLETKSPVTSAEVSQDGRYIT-TADGSTVKFWDANHFGL 220 (349)
Q Consensus 160 ~l~~~~~dg~v~vwd~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~d~~i~iwd~~~~~~ 220 (349)
++++++.|+.|++||++ .++++..+.+...+.+++|+|++++|+ ++.|+.|++||+++...
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 66778888999999985 345555565567899999999998765 45799999999998765
Q ss_pred ----eEEEc-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCc----------------------------------
Q 018860 221 ----VKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN---------------------------------- 261 (349)
Q Consensus 221 ----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~---------------------------------- 261 (349)
+..+. +...+..++|+|. ++++++++.++.+ +|+.....
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANE-SAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSF 317 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEET-TEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC------
T ss_pred cceeeEeecCCCCceEEEEEcCC-CCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccc
Confidence 44443 3446788999985 7788888777666 66554111
Q ss_pred -----EEE-------------EecCCCcceeEEEEccCCC----eEEEecCCCCEEEecC
Q 018860 262 -----EIA-------------CNKGHHGPVHCVRFSPGGE----SYASGSEDGTIRIWQT 299 (349)
Q Consensus 262 -----~~~-------------~~~~h~~~i~~l~~sp~~~----~l~sgs~Dg~v~vW~~ 299 (349)
... ....|.+.|+++++.+... .|+|||.||.|++||+
T Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 318 TALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 000 0113999999999766543 5999999999999985
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.3e-40 Score=292.74 Aligned_cols=253 Identities=17% Similarity=0.208 Sum_probs=187.0
Q ss_pred cceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC--eEEEeecccCCeEEEEECC--CCCeeEEeeCCC
Q 018860 8 VPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDT--NALRAASASADF 83 (349)
Q Consensus 8 ~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~ 83 (349)
...++.||+++|++++|+| +|++|++|+.|+++++|+..++. ++.++++|.++|++++|++ ++.+|+||+.|+
T Consensus 5 ~~~~~~~H~~~V~~v~~s~---~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 5 INTVDTSHEDMIHDAQMDY---YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp ---------CCEEEEEECG---GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS
T ss_pred eeeecccccCeEEEeeEcC---CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC
Confidence 3456789999999999997 89999999999999999988764 5788999999999999976 488999999999
Q ss_pred eEEEEECCCCC--EEEEe-ccCCeEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCCCC--CceeccCCCCeEEEEEecC
Q 018860 84 SAKVWDALTGD--VLHSF-EHKHIVRACSFSED--THLLLTGGMEKILRIFDLNRPDAP--PREVDRSPGSVRTVAWLHS 156 (349)
Q Consensus 84 ~i~vWd~~~~~--~~~~~-~~~~~v~~~~~s~~--~~~l~s~~~d~~i~lwd~~~~~~~--~~~~~~~~~~i~~~~~~~~ 156 (349)
+|++||+.+++ ....+ .|...|++++|+|+ +.+|++|+.|++|++||+...... ...+..|...+.++.|.|.
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 99999998874 44444 48889999999998 789999999999999998754321 2345667788999999875
Q ss_pred C----------------CeEEEEeeCCCeEEEEECCCC---ceEEeecC-CCCeeEEEEcCCCcEEEEecCCeEEEEecC
Q 018860 157 D----------------QTILSTCTDMGGVRLWDVRSG---EIVQTLET-KSPVTSAEVSQDGRYITTADGSTVKFWDAN 216 (349)
Q Consensus 157 ~----------------~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~-~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~ 216 (349)
. +.+|++++.|++|++||++.+ +++..+.. ...|.+++|+|++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~---------------- 225 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG---------------- 225 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS----------------
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCC----------------
Confidence 3 246677777788888887644 23444433 34566666666530
Q ss_pred CceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCc----EEEEecCCCcceeEEEEccCCCeEEEecCCC
Q 018860 217 HFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN----EIACNKGHHGPVHCVRFSPGGESYASGSEDG 292 (349)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~----~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg 292 (349)
..+.+|++++.|++|++|++.+.. ....+..|...|++++|+|++++||+|+.||
T Consensus 226 ---------------------~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~ 284 (316)
T 3bg1_A 226 ---------------------LPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN 284 (316)
T ss_dssp ---------------------CSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS
T ss_pred ---------------------CCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC
Confidence 012445555555555555554311 1123355788999999999999999999999
Q ss_pred CEEEecCC
Q 018860 293 TIRIWQTG 300 (349)
Q Consensus 293 ~v~vW~~~ 300 (349)
+|++|+..
T Consensus 285 ~v~lw~~~ 292 (316)
T 3bg1_A 285 KVTLWKES 292 (316)
T ss_dssp CEEEEEEC
T ss_pred eEEEEEEC
Confidence 99999864
No 45
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=301.04 Aligned_cols=280 Identities=16% Similarity=0.270 Sum_probs=227.7
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC-----------eEEEeeccc------------CCeEEEEEC
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD-----------WIGTFEGHK------------GAVWSCCLD 70 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~-----------~~~~~~~h~------------~~v~~~~~~ 70 (349)
.|.++|.+++|+| +|++|++|+.||.|++|+..++. ++..+.+|. ..|.+++|+
T Consensus 26 ~~~~~V~~v~~s~---~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 26 AEADIISTVEFNH---SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp CGGGSEEEEEECS---SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred cccCcEEEEEECC---CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc
Confidence 3689999999997 89999999999999999988766 588999998 889999999
Q ss_pred CCC--CeeEEeeCCCeEEEEECCCCCEE---------------------------------------EE--eccCCeEEE
Q 018860 71 TNA--LRAASASADFSAKVWDALTGDVL---------------------------------------HS--FEHKHIVRA 107 (349)
Q Consensus 71 ~~~--~~l~s~s~D~~i~vWd~~~~~~~---------------------------------------~~--~~~~~~v~~ 107 (349)
+++ .+|++++.|++|++||+.+++.. .. ..|...|.+
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 998 78999999999999998764431 12 248889999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCCCCCc-------eeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce
Q 018860 108 CSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR-------EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI 180 (349)
Q Consensus 108 ~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 180 (349)
++|+|++++|++| .|+.|++||+........ .+..|...|.+++|+|.+..++++++.||.|++||+++++.
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 9999999999998 799999999974332211 35578889999999987757788888899999999999886
Q ss_pred ----EEeecCCC-------------CeeEEEEcCCCcEEEEecCCeEEEEecCC-ceeeEEEcCCCce------------
Q 018860 181 ----VQTLETKS-------------PVTSAEVSQDGRYITTADGSTVKFWDANH-FGLVKSYNMPCTI------------ 230 (349)
Q Consensus 181 ----~~~~~~~~-------------~v~~~~~~~~~~~l~~~~d~~i~iwd~~~-~~~~~~~~~~~~~------------ 230 (349)
...+..+. .+.+++|+|++++|+++.++.|++||++. ..++..+.....+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 56666543 79999999999988776559999999987 6666666544322
Q ss_pred ----EEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEe--------------------------------cCCCccee
Q 018860 231 ----ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACN--------------------------------KGHHGPVH 274 (349)
Q Consensus 231 ----~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~--------------------------------~~h~~~i~ 274 (349)
..++|+|. +.+|++|+.|+.|++||+.+++.+... ..+...|.
T Consensus 342 i~~~~~~~~s~~-~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 420 (447)
T 3dw8_B 342 IFDKFECCWNGS-DSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKIL 420 (447)
T ss_dssp GGCCCCEEECTT-SSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCC
T ss_pred cccceEEEECCC-CCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCcee
Confidence 22788885 889999999999999999988775321 13346789
Q ss_pred EEEEccCCCeEEEecCCCCEEEecC
Q 018860 275 CVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 275 ~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
+++|+|++++||+++.++ +++|..
T Consensus 421 ~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 421 HTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EEEECSSSSEEEEECSSC-EEEEEC
T ss_pred EEEECCCCCEEEEEecce-eeeecc
Confidence 999999999999998876 777753
No 46
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.9e-38 Score=281.32 Aligned_cols=269 Identities=22% Similarity=0.400 Sum_probs=223.5
Q ss_pred CCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEE
Q 018860 51 GDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIF 129 (349)
Q Consensus 51 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lw 129 (349)
....+++++|.+.|++++|++++++|+||+.|++|++||..+++.+..+. |...|.+++|+|++++|++|+.|+.+++|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 34678899999999999999999999999999999999999999888775 77889999999999999999999999999
Q ss_pred ECCCCCCC---CceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-
Q 018860 130 DLNRPDAP---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT- 204 (349)
Q Consensus 130 d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~- 204 (349)
++...... ...+.+|.+.+.++.|.+++ . +++++.|++|++||+++++.+..+.. ...+.++.++|++.++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDN-Q-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETT-E-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCC-c-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 99764322 23467888999999998654 4 55677789999999999999888874 568999999999987655
Q ss_pred ecCCeEEEEecCCceeeEEEc-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEec--CCCcceeEEEEccC
Q 018860 205 ADGSTVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK--GHHGPVHCVRFSPG 281 (349)
Q Consensus 205 ~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--~h~~~i~~l~~sp~ 281 (349)
+.|++|++||+++..++..+. +...+..++|+|. +++|++|+.|++|++||+++++.+..+. .+...|.+++|+|+
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 569999999999988887775 4556889999985 8899999999999999999988876654 33458999999999
Q ss_pred CCeEEEecCCCCEEEecCCCCCCCcceee-eccCeeeeeEeChh
Q 018860 282 GESYASGSEDGTIRIWQTGPVTNDDTETL-TANGTIGKVKVTAD 324 (349)
Q Consensus 282 ~~~l~sgs~Dg~v~vW~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 324 (349)
+++|++|+.||.|++||+...... ..+ .+.+.+..+.++++
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~--~~~~~h~~~v~~~~~s~d 323 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRA--GVLAGHDNRVSCLGVTDD 323 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECTT
T ss_pred CCEEEEECCCCeEEEEEcccCcEe--eEeecCCCcEEEEEEcCC
Confidence 999999999999999998654321 122 23445556666553
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9e-39 Score=316.46 Aligned_cols=293 Identities=18% Similarity=0.234 Sum_probs=255.9
Q ss_pred ccccceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCe
Q 018860 5 KIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFS 84 (349)
Q Consensus 5 ~~~~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 84 (349)
++.....+.+|.+.|.+++|+| +|++|++++.||.|++|+..+++.+..+.+|..+|.+++|+|++++|++++.|+.
T Consensus 2 ~l~~~~~~~~h~~~v~~i~~sp---~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 78 (814)
T 3mkq_A 2 KLDIKKTFSNRSDRVKGIDFHP---TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFR 78 (814)
T ss_dssp CCCCEEEEEEECSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSE
T ss_pred CcccceeeecCCCceEEEEECC---CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCe
Confidence 3455667899999999999997 8999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 85 AKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 85 i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
|++||+.+++.+..+. |...|++++|+|++.+|++++.|+.|++||+.........+..|...+.+++|+|.++.++++
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence 9999999999888876 889999999999999999999999999999976544455667888999999999867778888
Q ss_pred eeCCCeEEEEECCCCceEEeecC--CCCeeEEEEcC--CCcEEEE-ecCCeEEEEecCCceeeEEEc-CCCceEEeeecC
Q 018860 164 CTDMGGVRLWDVRSGEIVQTLET--KSPVTSAEVSQ--DGRYITT-ADGSTVKFWDANHFGLVKSYN-MPCTIESASLEP 237 (349)
Q Consensus 164 ~~~dg~v~vwd~~~~~~~~~~~~--~~~v~~~~~~~--~~~~l~~-~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~ 237 (349)
++.||.|++||+++++....+.. ...+..+.++| ++.++++ +.|+.|++||+++...+..+. +...+..++|+|
T Consensus 159 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 238 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (814)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 88899999999998877666643 26789999998 8877655 568999999999988887776 445678889998
Q ss_pred CCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCe-EEEecCCCCEEEecCCC
Q 018860 238 KYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES-YASGSEDGTIRIWQTGP 301 (349)
Q Consensus 238 ~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~-l~sgs~Dg~v~vW~~~~ 301 (349)
. +.++++++.|+.|++||+.+++.+..+..|...+++++|+|++.. +++++.|+.+.+|++..
T Consensus 239 ~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 239 T-LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp S-SSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred C-CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 5 789999999999999999999999999999999999999999873 24444566788888754
No 48
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.4e-38 Score=328.72 Aligned_cols=286 Identities=29% Similarity=0.502 Sum_probs=254.0
Q ss_pred ceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEE
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW 88 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vW 88 (349)
.+++.+|.+.|++++|+| +|++|++|+.|++|++|+..+++.+.++++|...|.+++|+|++.+|++++.|+.|+||
T Consensus 608 ~~~~~~h~~~v~~~~~s~---~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQ---DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp SEEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eEEEecccccEEEEEECC---CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 456789999999999997 89999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCEEEEec-cCCeEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEee
Q 018860 89 DALTGDVLHSFE-HKHIVRACSFSE--DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT 165 (349)
Q Consensus 89 d~~~~~~~~~~~-~~~~v~~~~~s~--~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 165 (349)
|+.+++.+..+. |...|.+++|+| ++.++++|+.|+.|++||+.+.. ....+.+|...|.+++|+|++. ++++++
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-~~~~~~~h~~~v~~~~~sp~~~-~l~s~s 762 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-CRNTMFGHTNSVNHCRFSPDDE-LLASCS 762 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-EEEEECCCSSCEEEEEECSSTT-EEEEEE
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-hhheecCCCCCEEEEEEecCCC-EEEEEE
Confidence 999999988875 888999999999 55689999999999999997643 3445678899999999987555 566777
Q ss_pred CCCeEEEEECCCCceEEeecCC--------------CCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEc--CCCc
Q 018860 166 DMGGVRLWDVRSGEIVQTLETK--------------SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYN--MPCT 229 (349)
Q Consensus 166 ~dg~v~vwd~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~--~~~~ 229 (349)
.||+|++||+++++....+... ..+.++.|+|++..++++.++.+.+||+.+......+. +...
T Consensus 763 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 842 (1249)
T 3sfz_A 763 ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHST 842 (1249)
T ss_dssp SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSC
T ss_pred CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCc
Confidence 8899999999998876665321 25778899999999988889999999999988776664 3456
Q ss_pred eEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 230 IESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
+..++|+|. +..+++++.|+.|++||+.++..+..+.+|..+|.+++|+|++++|++++.||+|++|++.
T Consensus 843 v~~~~~sp~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 843 IQYCDFSPY-DHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp CCEEEECSS-TTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred eEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 778899885 8899999999999999999999999999999999999999999999999999999999964
No 49
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=6e-38 Score=291.31 Aligned_cols=281 Identities=19% Similarity=0.299 Sum_probs=236.7
Q ss_pred ceeeccCCCce-eeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEE
Q 018860 9 PLVCHGHSRPV-VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87 (349)
Q Consensus 9 ~~~~~gh~~~v-~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~v 87 (349)
..++.||.+.| .++.|+ +.+|++|+.|++|++|+..+++.+..+.+|...|++++|++++ +|++|+.|++|++
T Consensus 114 ~~~l~~h~~~v~~~~~~~-----~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~v 187 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQFE-----DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRV 187 (464)
T ss_dssp EEEEECCSSSCEEEEEEE-----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEE
T ss_pred eEEEcCCCCCcEEEEEEC-----CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEE
Confidence 34678999886 566554 5699999999999999999999999999999999999999988 8999999999999
Q ss_pred EECCCCCEEEEec-cCCeEEEEEEc--CCCCEEEEEeCCCeEEEEECCCCCCC----------------------Cceec
Q 018860 88 WDALTGDVLHSFE-HKHIVRACSFS--EDTHLLLTGGMEKILRIFDLNRPDAP----------------------PREVD 142 (349)
Q Consensus 88 Wd~~~~~~~~~~~-~~~~v~~~~~s--~~~~~l~s~~~d~~i~lwd~~~~~~~----------------------~~~~~ 142 (349)
||+.+++++..+. |...|.+++|+ +++.++++|+.|+.|++||+...... ...+.
T Consensus 188 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 188 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred EECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 9999999888886 88999999998 57899999999999999999765432 12345
Q ss_pred cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCcee
Q 018860 143 RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGL 220 (349)
Q Consensus 143 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~ 220 (349)
+|...+.++. +++.++++++.||.|++||+++++++..+.. ...+.++.++|++.++++ +.|+.|++||++++++
T Consensus 268 ~~~~~v~~~~---~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 344 (464)
T 3v7d_B 268 GHMASVRTVS---GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL 344 (464)
T ss_dssp CCSSCEEEEE---EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred CccceEEEEc---CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Confidence 6667777764 2345677788889999999999999888864 568999999999887655 5699999999999998
Q ss_pred eEEEcC-CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 221 VKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 221 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
+..+.. ...+..+.+. +.++++++.|+.|++||+.++....... |...+..++|+|++.+|++|+ ||.|++||+
T Consensus 345 ~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 345 MYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp EEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEET
T ss_pred EEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEEC
Confidence 888754 4456677775 5799999999999999999887765543 667788999999999999999 999999998
Q ss_pred CCCC
Q 018860 300 GPVT 303 (349)
Q Consensus 300 ~~~~ 303 (349)
....
T Consensus 420 ~~g~ 423 (464)
T 3v7d_B 420 RSGK 423 (464)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 7654
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.5e-38 Score=280.58 Aligned_cols=302 Identities=18% Similarity=0.262 Sum_probs=246.5
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCC
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~ 93 (349)
-|.++|.+++|+| ||++++.+..++.+..|............+|...|.+++|++++++|++++ |+.|++||+.++
T Consensus 7 ~~~~~v~~~~~s~---dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~ 82 (337)
T 1gxr_A 7 MGSKPAYSFHVTA---DGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHP 82 (337)
T ss_dssp EEEEECCEEEECS---SSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTST
T ss_pred ccCCceeEEEECC---CCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCC
Confidence 3678899999997 999999888888777776554444445558999999999999999999999 999999999876
Q ss_pred CE---EEEe---ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCC-CCceeccCCCCeEEEEEecCCCeEEEEeeC
Q 018860 94 DV---LHSF---EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA-PPREVDRSPGSVRTVAWLHSDQTILSTCTD 166 (349)
Q Consensus 94 ~~---~~~~---~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 166 (349)
+. +..+ .|...|.+++|+|++++|++++.|+.|++||+..... ....+..|...+.++.|+|.+ .++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~ 161 (337)
T 1gxr_A 83 GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS-KVCFSCCS 161 (337)
T ss_dssp TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS-SEEEEEET
T ss_pred CceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC-CEEEEEeC
Confidence 53 2222 4788999999999999999999999999999976542 223456778889999998755 45567777
Q ss_pred CCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEE
Q 018860 167 MGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFV 244 (349)
Q Consensus 167 dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
+|.|++||+++++.+..+.. ...+.++.++|++.++++ +.|+.|++||+++.+.+..+.....+..++++|. ++.++
T Consensus 162 dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~ 240 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT-GEWLA 240 (337)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTT-SSEEE
T ss_pred CCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCC-CCEEE
Confidence 89999999999998888864 568999999999977655 5699999999999999888888888899999985 88999
Q ss_pred EecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCCCCCcceeeeccCeeeeeEeChh
Q 018860 245 AGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANGTIGKVKVTAD 324 (349)
Q Consensus 245 ~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (349)
+++.|+.|++||+.+++.. .+..|..+|.+++|+|++++|++++.||.|++|++...... ......+.+..+.+.++
T Consensus 241 ~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~--~~~~~~~~v~~~~~s~~ 317 (337)
T 1gxr_A 241 VGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI--FQSKESSSVLSCDISVD 317 (337)
T ss_dssp EEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE--EEEECSSCEEEEEECTT
T ss_pred EEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE--EEecCCCcEEEEEECCC
Confidence 9999999999999987764 56789999999999999999999999999999998654322 22223344445555553
No 51
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.2e-39 Score=293.86 Aligned_cols=261 Identities=25% Similarity=0.398 Sum_probs=220.7
Q ss_pred CCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEE
Q 018860 41 SSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLT 119 (349)
Q Consensus 41 ~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s 119 (349)
..+..|+..+..+.++++||.+.|++++|+|++.+|+||+.|++|+|||..+++..+.+. |...|.+++|+|++++|++
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEE
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEE
Confidence 445667777778899999999999999999999999999999999999999998888775 7788999999999999999
Q ss_pred EeCCCeEEEEECCCCC------CCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeec------CC
Q 018860 120 GGMEKILRIFDLNRPD------APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE------TK 187 (349)
Q Consensus 120 ~~~d~~i~lwd~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~------~~ 187 (349)
|+.|+.+++|++.... .....+.+|.+.+.++.|.|.++..+++++.|++|++||+++++.+..+. +.
T Consensus 126 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~ 205 (380)
T 3iz6_a 126 GGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHT 205 (380)
T ss_dssp CCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCC
T ss_pred eeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCc
Confidence 9999999999986432 12345678888999999998877778889999999999999998887662 34
Q ss_pred CCeeEEEEcC-CCcEE-EEecCCeEEEEecCC-ceeeEEEc-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEE
Q 018860 188 SPVTSAEVSQ-DGRYI-TTADGSTVKFWDANH-FGLVKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEI 263 (349)
Q Consensus 188 ~~v~~~~~~~-~~~~l-~~~~d~~i~iwd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~ 263 (349)
..+.++.+++ ++.++ +++.|++|++||++. ...+..+. +...+.+++|+|. +++|++|+.|++|++||+++++.+
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPD-GQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTT-SSEEEEECSSSCEEEEETTTTEEE
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecC-CCeEEEEcCCCeEEEEECCCCcEE
Confidence 5789999977 66665 556799999999984 45555554 4566889999984 889999999999999999999988
Q ss_pred EEecCCC-------cceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 264 ACNKGHH-------GPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 264 ~~~~~h~-------~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
..+..+. ..|.+++|+|++++|++|+.||.|++||+...
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC
Confidence 7775443 35899999999999999999999999997543
No 52
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-38 Score=280.79 Aligned_cols=245 Identities=22% Similarity=0.305 Sum_probs=212.3
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
..+.||.++|.+++|+| +|++|++|+.|++|++||..+++.+..+.+|...|.+++|++++.+|+||+.|++|++||
T Consensus 59 ~~~~~h~~~v~~~~~s~---dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 59 RSFKGHSHIVQDCTLTA---DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred eEEeCCcccEEEEEECC---CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 35789999999999997 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEeccCCeEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 90 ALTGDVLHSFEHKHIVRACSFSED------THLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~s~~------~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
+..........|...|.+++|+|. +..+++++.|+.|++||+.... ....+.+|...|.+++|+|+ +.+|++
T Consensus 136 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~sp~-g~~l~s 213 (319)
T 3frx_A 136 IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ-IEADFIGHNSNINTLTASPD-GTLIAS 213 (319)
T ss_dssp TTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE-EEEEECCCCSCEEEEEECTT-SSEEEE
T ss_pred CCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch-hheeecCCCCcEEEEEEcCC-CCEEEE
Confidence 975444444468899999999985 4589999999999999997533 23456788999999999875 456677
Q ss_pred eeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcC---------CCceEEee
Q 018860 164 CTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM---------PCTIESAS 234 (349)
Q Consensus 164 ~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~---------~~~~~~~~ 234 (349)
++.||+|++||+++++.+..+..+.++.+++|+|++.+++++.++.+++|++.....+..+.. ...+.+++
T Consensus 214 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 293 (319)
T 3frx_A 214 AGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLA 293 (319)
T ss_dssp EETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEE
Confidence 888899999999999999999888899999999999999988888899999988776655432 23467889
Q ss_pred ecCCCCCEEEEecCCCeEEEEeCCCC
Q 018860 235 LEPKYGNKFVAGGEDMWVRFFDFHTG 260 (349)
Q Consensus 235 ~~~~~~~~~~~~~~d~~i~v~d~~~~ 260 (349)
|+|+ +++|++|+.|+.|++||+.++
T Consensus 294 ~spd-g~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 294 WSAD-GQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ECTT-SSEEEEEETTSCEEEEEEEEC
T ss_pred ECCC-CCEEEEeecCceEEEEEEeec
Confidence 9984 899999999999999998654
No 53
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-39 Score=319.06 Aligned_cols=205 Identities=13% Similarity=0.134 Sum_probs=178.2
Q ss_pred eccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECC
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDAL 91 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~ 91 (349)
..||.+.|++++|+| ++++||+|+.|++|++|+..+.+.+..+ .|..+|.+++|++ +++|+|++.|++|+|||+.
T Consensus 13 ~~gh~~~V~~lafsp---dg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDF---TQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEECSSCEEEEEEET---TTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccCCCCCcEEEEECC---CCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 359999999999997 8999999999999999998877766554 4788999999999 8899999999999999999
Q ss_pred CCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCC----------ceeccCCCCeEEEEEecCCCeEE
Q 018860 92 TGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP----------REVDRSPGSVRTVAWLHSDQTIL 161 (349)
Q Consensus 92 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~----------~~~~~~~~~i~~~~~~~~~~~~l 161 (349)
+++++..+.|...|++++|+|++++|++|+.|+.|++||+....... ....+|.+.|.+++|+|.+..++
T Consensus 88 ~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 88 SQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp TCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 99999999888999999999999999999999999999997643210 22356888999999999877778
Q ss_pred EEeeCCCeEEEEECCCCceEEeecCC-------------------CCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceee
Q 018860 162 STCTDMGGVRLWDVRSGEIVQTLETK-------------------SPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLV 221 (349)
Q Consensus 162 ~~~~~dg~v~vwd~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~ 221 (349)
++++.||.| +||+++++++..+..+ ..|.+++|+|++.++++ +.|++|++||+++++++
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 888899999 9999999988877644 56999999999987755 56999999999877665
Q ss_pred E
Q 018860 222 K 222 (349)
Q Consensus 222 ~ 222 (349)
.
T Consensus 247 ~ 247 (902)
T 2oaj_A 247 M 247 (902)
T ss_dssp E
T ss_pred E
Confidence 4
No 54
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=278.71 Aligned_cols=286 Identities=17% Similarity=0.220 Sum_probs=231.2
Q ss_pred ceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC-CCeE-EEeecccCCeEEEEECCCCCeeEEeeCCCeEE
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET-GDWI-GTFEGHKGAVWSCCLDTNALRAASASADFSAK 86 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~-~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 86 (349)
..++.+|.+.|++++|+|...+|++|++|+.|+.+++|+..+ +..+ ..+.+|...|.+++|++++.+|++++.|+.|+
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAK 111 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEE
Confidence 345689999999999998333379999999999999999887 5544 88999999999999999999999999999999
Q ss_pred EEECCCCCEEEEeccCCeEEEEEE--cCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEe
Q 018860 87 VWDALTGDVLHSFEHKHIVRACSF--SEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC 164 (349)
Q Consensus 87 vWd~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 164 (349)
+||+.+++.+....|...|.+++| +|++++|++++.|+.|++||+..... ...+.. ...+.++.+.+ ..+ +.+
T Consensus 112 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~-~~~~~~~~~~~--~~~-~~~ 186 (368)
T 3mmy_A 112 MWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP-MMVLQL-PERCYCADVIY--PMA-VVA 186 (368)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC-SEEEEC-SSCEEEEEEET--TEE-EEE
T ss_pred EEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE-EEEEec-CCCceEEEecC--Cee-EEE
Confidence 999999999888889999999999 89999999999999999999976543 333333 34666776654 344 445
Q ss_pred eCCCeEEEEECCCCceEEe-ec--CCCCeeEEEEcCCCc-----EEEEecCCeEEEEecCCc---eeeEEEcCCC-----
Q 018860 165 TDMGGVRLWDVRSGEIVQT-LE--TKSPVTSAEVSQDGR-----YITTADGSTVKFWDANHF---GLVKSYNMPC----- 228 (349)
Q Consensus 165 ~~dg~v~vwd~~~~~~~~~-~~--~~~~v~~~~~~~~~~-----~l~~~~d~~i~iwd~~~~---~~~~~~~~~~----- 228 (349)
..++.+++||++....... +. .......+.+.++.. +++++.|+.|++||++.. .....+....
T Consensus 187 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 266 (368)
T 3mmy_A 187 TAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTN 266 (368)
T ss_dssp EGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC---
T ss_pred eCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccc
Confidence 5569999999987654322 22 223455555554432 566778999999999876 3344443332
Q ss_pred --------ceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 229 --------TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 229 --------~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
.+..++|+|. +++|++++.|+.|++||+.+++.+..+.+|..+|.+++|+|++++|++||.|+..+.|+.-
T Consensus 267 ~~~~~~~~~v~~~~~sp~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 267 TSAPQDIYAVNGIAFHPV-HGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp -CCCEEECCEEEEEECTT-TCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred ccccccccceEEEEEecC-CCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 4788999984 7899999999999999999999999999999999999999999999999999977777643
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-38 Score=292.08 Aligned_cols=279 Identities=16% Similarity=0.171 Sum_probs=230.8
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEE
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVL 96 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~ 96 (349)
..++.++|+| +|++|++++.|+.+++|+..+++....+.+| ..+....|++++.+|++|+.|+.|++||+.+++..
T Consensus 57 ~~~~~~~~s~---~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 132 (420)
T 3vl1_A 57 DAGKGNTFEK---VGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR 132 (420)
T ss_dssp BCCTTCEEEE---EETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE
T ss_pred ccccceeeee---cCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee
Confidence 3455889998 8999999999999999999887777777777 44555578999999999999999999999999888
Q ss_pred EEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 018860 97 HSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175 (349)
Q Consensus 97 ~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~ 175 (349)
..+ .|...|++++|+|++++|++|+.|+.|++||+.... ....+..|...|.+++|+|++. ++++++.||+|++||+
T Consensus 133 ~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 133 EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS-NPRTLIGHRATVTDIAIIDRGR-NVLSASLDGTIRLWEC 210 (420)
T ss_dssp EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-CCEEEECCSSCEEEEEEETTTT-EEEEEETTSCEEEEET
T ss_pred eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc-CceEEcCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeEC
Confidence 876 588999999999999999999999999999997654 3456778999999999998655 5557778899999999
Q ss_pred CCCceEEeecC----CCCee---------------------EEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcC--C
Q 018860 176 RSGEIVQTLET----KSPVT---------------------SAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNM--P 227 (349)
Q Consensus 176 ~~~~~~~~~~~----~~~v~---------------------~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~--~ 227 (349)
++++.+..+.. ...+. ++.|+|+++++++ +.|+.|++||+++...+..+.. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 290 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT 290 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC
Confidence 99998887753 22343 4455788877765 5689999999999887766643 4
Q ss_pred CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcE-EEEecC-CCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE-IACNKG-HHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~-~~~~~~-h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
..+..++|+|....++++++.|+.|++||+++++. +..+.+ |...|.++.+ |++++|++++.||+|++|++...
T Consensus 291 ~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 291 CSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred CCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 56889999986444999999999999999998754 556655 6778888855 57889999999999999998653
No 56
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=278.61 Aligned_cols=244 Identities=19% Similarity=0.300 Sum_probs=215.1
Q ss_pred ceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEE
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVW 88 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vW 88 (349)
...+.||...|.++.|+| ++.++++++.|++|++|+..+++.+..+.+|...+.+++|+|++++|++++.|+.|++|
T Consensus 73 ~~~l~gh~~~v~~~~~~~---~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~ 149 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISH---TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIF 149 (321)
T ss_dssp EEEECCCSSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEE
T ss_pred eeeeccCCCCEEEEEECC---CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 345789999999999997 78899999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCC
Q 018860 89 DALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDM 167 (349)
Q Consensus 89 d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d 167 (349)
++.+++....+. +...|.+++|+|++++|++|+.|+.|++||+.+.+ ....+.+|...|.+++|+|++ .+|++++.|
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spd~-~~l~s~s~d 227 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK-LLHTLEGHAMPIRSLTFSPDS-QLLVTASDD 227 (321)
T ss_dssp ETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCCCEEEECTTS-CEEEEECTT
T ss_pred EcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-EEEEEcccCCceeEEEEcCCC-CEEEEEcCC
Confidence 999998877765 66789999999999999999999999999997543 344567788899999998754 566788888
Q ss_pred CeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEc-CCCceEEeeecCCCCCEEE
Q 018860 168 GGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFV 244 (349)
Q Consensus 168 g~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 244 (349)
++|++||+++++....+.. ...+.+++|+|++.+|++ +.|++|++||+++..++..+. +...+..++|+|. +.+|+
T Consensus 228 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~-g~~l~ 306 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN-GSKIV 306 (321)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEE
T ss_pred CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC-CCEEE
Confidence 9999999999998888765 457999999999987654 679999999999998888764 4567889999984 88999
Q ss_pred EecCCCeEEEEeCC
Q 018860 245 AGGEDMWVRFFDFH 258 (349)
Q Consensus 245 ~~~~d~~i~v~d~~ 258 (349)
+++.|+.|++||+.
T Consensus 307 s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 307 SVGDDQEIHIYDCP 320 (321)
T ss_dssp EEETTCCEEEEECC
T ss_pred EEeCCCeEEEEeCC
Confidence 99999999999964
No 57
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.9e-38 Score=278.66 Aligned_cols=288 Identities=16% Similarity=0.181 Sum_probs=214.2
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCC----CeEEEeecccCCeEEEEECC--CCCeeEEeeCCCe
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDT--NALRAASASADFS 84 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~----~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~ 84 (349)
.+.||.++|++++|+| ++++|++|+.|+.|++|+..++ +.+..+.+|...|.+++|++ ++.+|++|+.|+.
T Consensus 6 ~~~gH~~~v~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDF---YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp EECCCSSCEEEEEECS---SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cCcccccceeEEEEcC---CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 5689999999999997 8999999999999999998865 46788899999999999999 6899999999999
Q ss_pred EEEEECCCC---------CEEEEe-ccCCeEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCCCCCce------------
Q 018860 85 AKVWDALTG---------DVLHSF-EHKHIVRACSFSED--THLLLTGGMEKILRIFDLNRPDAPPRE------------ 140 (349)
Q Consensus 85 i~vWd~~~~---------~~~~~~-~~~~~v~~~~~s~~--~~~l~s~~~d~~i~lwd~~~~~~~~~~------------ 140 (349)
|++||+.++ +.+..+ .|...|.+++|+|+ +++|++++.|+.|++||+.........
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 999999886 334444 48889999999999 999999999999999999765432211
Q ss_pred eccCCCCeEEEEEecC--CCeEEEEeeCCCeEEEEECCCCce--EEeec-CCCCeeEEEEcCCC----cEE-EEecCCeE
Q 018860 141 VDRSPGSVRTVAWLHS--DQTILSTCTDMGGVRLWDVRSGEI--VQTLE-TKSPVTSAEVSQDG----RYI-TTADGSTV 210 (349)
Q Consensus 141 ~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~-~~~~v~~~~~~~~~----~~l-~~~~d~~i 210 (349)
...+...+.++.|.|. ++.++++++.++.+.+|+...++. +..+. +...+.++.|+|++ .++ +++.|+.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 1256678999999986 466777788889998888887765 44454 45689999999997 555 45679999
Q ss_pred EEEecCCceeeEEEcCCC-ceEEeeecCCCCCEE----EEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeE
Q 018860 211 KFWDANHFGLVKSYNMPC-TIESASLEPKYGNKF----VAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESY 285 (349)
Q Consensus 211 ~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l 285 (349)
++||++............ ........+ ....+ ..+.....+.+|+....+.+..+.+|...|++++|+|++++|
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 321 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSA-DVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTIL 321 (351)
T ss_dssp EEEEEEECC----------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCc-ccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEE
Confidence 999998654332221111 111111111 11111 223344556677777777888899999999999999999999
Q ss_pred EEecCCCCEEEecCCCC
Q 018860 286 ASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 286 ~sgs~Dg~v~vW~~~~~ 302 (349)
++|+.||.|++|++...
T Consensus 322 ~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYS 338 (351)
T ss_dssp EEEETTSCEEEEEECTT
T ss_pred EEecCCCcEEEEecCcC
Confidence 99999999999998643
No 58
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=9.9e-38 Score=287.86 Aligned_cols=272 Identities=20% Similarity=0.332 Sum_probs=230.0
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCC
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT 92 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~ 92 (349)
.+|.++|.++.| ++++|++|+.|++|++|+..+++.+..+.+|...|.+++| ++.+|++|+.||+|++||+.+
T Consensus 130 ~~~~~~v~~~~~-----d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 130 SETSKGVYCLQY-----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp CSSCCCEEEEEC-----CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred cCCCCcEEEEEE-----CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC
Confidence 467788998876 5789999999999999999999999999999999999998 678999999999999999999
Q ss_pred CCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCC--ceeccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 018860 93 GDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP--REVDRSPGSVRTVAWLHSDQTILSTCTDMGG 169 (349)
Q Consensus 93 ~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 169 (349)
++.+..+. |...|.+++|++ .++++|+.|+.|++||+....... ..+.+|...+.++.| ++.++++++.||.
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~ 277 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRT 277 (435)
T ss_dssp CCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSE
T ss_pred CcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCe
Confidence 99888875 788999999974 599999999999999997654332 456778889999998 3456778888899
Q ss_pred EEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcC-CCceEEeeecCCCCCEEEEec
Q 018860 170 VRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGG 247 (349)
Q Consensus 170 v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 247 (349)
|++||+++++.+..+.. ...+.++.+.+ ..+++++.|+.|++||++++.++..+.. ...+.++.+ ++.++++|+
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~sg~ 353 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGA 353 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---CSSEEEEEE
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEeCC-CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---cCCEEEEEe
Confidence 99999999999888874 45788888842 3445667799999999999988887764 445667776 478999999
Q ss_pred CCCeEEEEeCCCCc---------EEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 248 EDMWVRFFDFHTGN---------EIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 248 ~d~~i~v~d~~~~~---------~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
.|+.|++||+.+++ .+..+.+|.++|.+++| ++.+|++|+.||+|++||+...
T Consensus 354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 354 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 99999999997765 78888999999999999 7788999999999999998654
No 59
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.3e-38 Score=285.50 Aligned_cols=278 Identities=12% Similarity=0.090 Sum_probs=209.6
Q ss_pred CCceeeEEEeecCCCccEEEEEecCC-------CeEEEeCCCCCe----------EEEeecccCCeEEEEECCC------
Q 018860 16 SRPVVDLFYSPITPDGFFLISASKDS-------SPMLRNGETGDW----------IGTFEGHKGAVWSCCLDTN------ 72 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~d~-------~i~iw~~~~~~~----------~~~~~~h~~~v~~~~~~~~------ 72 (349)
..||++++|+| ||++|++|+.|. .|++|+...... ...+.+|...|++++++.+
T Consensus 14 g~PV~sv~fs~---dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~ 90 (365)
T 4h5i_A 14 GYPAYGAKFLN---NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGC 90 (365)
T ss_dssp SSCEEEEEEEE---TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEEC
T ss_pred CCCEEEEEEeC---CCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEE
Confidence 46899999998 899999997654 499998764421 1346788888988877543
Q ss_pred ---CCeeEEeeCCCeEEEEECCCCCE-EEEe---------ccCCeEEEEEEcCCCCEEEE--EeCCCeEEEEECCCCCCC
Q 018860 73 ---ALRAASASADFSAKVWDALTGDV-LHSF---------EHKHIVRACSFSEDTHLLLT--GGMEKILRIFDLNRPDAP 137 (349)
Q Consensus 73 ---~~~l~s~s~D~~i~vWd~~~~~~-~~~~---------~~~~~v~~~~~s~~~~~l~s--~~~d~~i~lwd~~~~~~~ 137 (349)
+..|++++.|+.+|+|++.+... +... .+...+++++|+|||+++++ ++.|++|++||+.+...
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~- 169 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE- 169 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE-
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE-
Confidence 23455567789999999866532 2211 13346899999999998765 45799999999976443
Q ss_pred CceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeec---CCCCeeEEEEcCCCcEEEE-ecCC----e
Q 018860 138 PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE---TKSPVTSAEVSQDGRYITT-ADGS----T 209 (349)
Q Consensus 138 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~-~~d~----~ 209 (349)
... ..|.+.|.+++|+|++ .+++++++ +.+++|+..+++.+.... +...+.+++|+|++.++++ +.++ .
T Consensus 170 ~~~-~~~~~~V~~v~fspdg-~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~ 246 (365)
T 4h5i_A 170 KFE-IETRGEVKDLHFSTDG-KVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIV 246 (365)
T ss_dssp EEE-EECSSCCCEEEECTTS-SEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEE
T ss_pred EEE-eCCCCceEEEEEccCC-ceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeE
Confidence 222 3467789999998755 45666665 567778777776654332 3446899999999988755 4444 6
Q ss_pred EEEEecCCceee----EE-EcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEE-ecCCCcceeEEEEccCCC
Q 018860 210 VKFWDANHFGLV----KS-YNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIAC-NKGHHGPVHCVRFSPGGE 283 (349)
Q Consensus 210 i~iwd~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~-~~~h~~~i~~l~~sp~~~ 283 (349)
+++||+...... .. ..+...+.+++|+|+ +++|++|+.|++|++||+.+++.+.. +.+|..+|++|+|||+++
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spd-g~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMK-GELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp EEEEEEETTEEEEEEEEEEESSCSCEEEEEECTT-SCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC
T ss_pred EeecccccceecceeeeeecCCCCCeEeEEECCC-CCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC
Confidence 888988765432 12 234456889999984 89999999999999999999999877 479999999999999999
Q ss_pred eEEEecCCCCEEEecCCC
Q 018860 284 SYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 284 ~l~sgs~Dg~v~vW~~~~ 301 (349)
+|||||.|++||||+++.
T Consensus 326 ~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 326 YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEEETTSEEEEEECCT
T ss_pred EEEEEeCCCeEEEEEcCC
Confidence 999999999999999853
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.3e-37 Score=283.49 Aligned_cols=282 Identities=12% Similarity=0.118 Sum_probs=227.2
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCC
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT 92 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~ 92 (349)
.+| ..+....|+| ++++|++|+.|+.+++|+..+++.+..+.+|...|.+++|+|++.+|++|+.|+.|++||+.+
T Consensus 95 ~~~-~~~~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 170 (420)
T 3vl1_A 95 KRA-DYTAVDTAKL---QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD 170 (420)
T ss_dssp CSC-CEEEEEEECS---SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ecC-CceEEEEEec---CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 344 3344445665 899999999999999999999988888899999999999999999999999999999999999
Q ss_pred CCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceec---cCCCCeEEEEEec-------------
Q 018860 93 GDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVD---RSPGSVRTVAWLH------------- 155 (349)
Q Consensus 93 ~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~---~~~~~i~~~~~~~------------- 155 (349)
++.+..+. |...|.+++|+|++++|++++.|+.|++||+.+... ...+. .+...+.++.|.+
T Consensus 171 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 171 GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT-IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE-EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce-eEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 98887775 889999999999999999999999999999976432 22222 3455666666643
Q ss_pred -------CCCeEEEEeeCCCeEEEEECCCCceEEeec--CCCCeeEEEEcCCCc-EE-EEecCCeEEEEecCCcee-eEE
Q 018860 156 -------SDQTILSTCTDMGGVRLWDVRSGEIVQTLE--TKSPVTSAEVSQDGR-YI-TTADGSTVKFWDANHFGL-VKS 223 (349)
Q Consensus 156 -------~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~-~l-~~~~d~~i~iwd~~~~~~-~~~ 223 (349)
+++.++++++.||.|++||+++++....+. +...+.+++|+|++. ++ +++.|+.|++||+++... +..
T Consensus 250 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~ 329 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGE 329 (420)
T ss_dssp CCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred ccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhh
Confidence 356678888889999999999998877765 346799999999987 55 456789999999988643 444
Q ss_pred Ec--CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCc---------EEEEecCCCcceeEEEEccCCC---eEEEec
Q 018860 224 YN--MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN---------EIACNKGHHGPVHCVRFSPGGE---SYASGS 289 (349)
Q Consensus 224 ~~--~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~---------~~~~~~~h~~~i~~l~~sp~~~---~l~sgs 289 (349)
+. ....+..+.+ + ++++|++++.|+.|++|++.... ....+.+|.+.|.+++|+|+++ .|++++
T Consensus 330 ~~~~~~~~v~~~~~-~-~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 330 FLINEGTPINNVYF-A-AGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp EEESTTSCEEEEEE-E-TTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred hhccCCCCceEEEe-C-CCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence 43 3344555544 4 46799999999999999987632 2234567899999999999999 787888
Q ss_pred CCCCEEEecCCC
Q 018860 290 EDGTIRIWQTGP 301 (349)
Q Consensus 290 ~Dg~v~vW~~~~ 301 (349)
.+|.+++|++..
T Consensus 408 ~~g~~~~~~~~~ 419 (420)
T 3vl1_A 408 KNNFCALYNLSN 419 (420)
T ss_dssp TTTEEEEEESCC
T ss_pred CCceEEEEeccC
Confidence 899999999753
No 61
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.9e-38 Score=282.55 Aligned_cols=246 Identities=19% Similarity=0.254 Sum_probs=204.9
Q ss_pred eccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeE----EEeecccCCeEEEEECCCCCeeEEeeCCCeEEE
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWI----GTFEGHKGAVWSCCLDTNALRAASASADFSAKV 87 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~v 87 (349)
..+|.+.|.+++|+| +++ +++++.|++|++|+..+++.+ ....+|...|++++|+|++++|+||+.|++|++
T Consensus 90 ~~~~~~~V~~~~~s~---d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i 165 (357)
T 4g56_B 90 GVQTEAGVTDVAWVS---EKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV 165 (357)
T ss_dssp EEECSSCEEEEEEET---TTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred cCCCCCCEEEEEEcC---CCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 357999999999997 665 557889999999998877643 234589999999999999999999999999999
Q ss_pred EECCCCCEEEEec-cCCeEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCCCCc-eeccCCCCeEEEEEecCCCeEEEEe
Q 018860 88 WDALTGDVLHSFE-HKHIVRACSFSEDTH-LLLTGGMEKILRIFDLNRPDAPPR-EVDRSPGSVRTVAWLHSDQTILSTC 164 (349)
Q Consensus 88 Wd~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~s~~~d~~i~lwd~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~ 164 (349)
||+.+++++..+. |...|++++|+|++. ++++++.|++|++||+.+.+.... ....+...+.+++|+|.++.+++++
T Consensus 166 wd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence 9999999888876 888999999999875 789999999999999986554322 2345667899999999888899999
Q ss_pred eCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCC-cEE-EEecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCC
Q 018860 165 TDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDG-RYI-TTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGN 241 (349)
Q Consensus 165 ~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~-~~l-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (349)
+.|+.|++||+++++++..+.. ...+.+++|+|++ ++| +++.|++|++||+++.++++.+.+...+.+++|+|.++.
T Consensus 246 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 246 DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHS 325 (357)
T ss_dssp ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTT
T ss_pred ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCC
Confidence 9999999999999998888865 4689999999987 455 456799999999999999888888888999999997789
Q ss_pred EEEEecCCCeEEEEeCCCCc
Q 018860 242 KFVAGGEDMWVRFFDFHTGN 261 (349)
Q Consensus 242 ~~~~~~~d~~i~v~d~~~~~ 261 (349)
+|++++.|++|++|++.+..
T Consensus 326 ~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 326 KFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EEEEEETTSCEEEEECC---
T ss_pred EEEEEcCCCeEEEEECCCCC
Confidence 99999999999999997643
No 62
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.3e-37 Score=277.15 Aligned_cols=276 Identities=10% Similarity=0.011 Sum_probs=232.9
Q ss_pred eccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC---eEEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEE
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD---WIGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKV 87 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~---~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~v 87 (349)
..+|.+.|.+++|+| ++++|++++.|+.+++|+..+++ .+..+.+|...|.+++|++++. +|++|+.|+.|++
T Consensus 7 ~~~h~~~v~~~~~s~---~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 7 EQAPKDYISDIKIIP---SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SSCCSSCEEEEEEEG---GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ccCCCCcEEEEEEcC---CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 468999999999998 88999999999999999988776 3566679999999999999999 9999999999999
Q ss_pred EEC-CCCCEEEEec--cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCC---------CCCCCceeccCCCCeEEEEEec
Q 018860 88 WDA-LTGDVLHSFE--HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR---------PDAPPREVDRSPGSVRTVAWLH 155 (349)
Q Consensus 88 Wd~-~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~---------~~~~~~~~~~~~~~i~~~~~~~ 155 (349)
||+ .+++...... |...|.+++|+| +.++++++.|+.|++||+.. ... ...+. +...+.+++|.+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN-SNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC-SSSSS-SCCCEEEEEECS
T ss_pred EEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe-eeEEe-eCCceEEEEecC
Confidence 999 8887766666 889999999999 99999999999999999875 322 22333 778899999986
Q ss_pred CCCeEEEEeeCCCeEEEEECCC-CceE---EeecCCCCeeEEEEcC-CCcEEEE-ecCCeEEEEecCCc------eeeEE
Q 018860 156 SDQTILSTCTDMGGVRLWDVRS-GEIV---QTLETKSPVTSAEVSQ-DGRYITT-ADGSTVKFWDANHF------GLVKS 223 (349)
Q Consensus 156 ~~~~~l~~~~~dg~v~vwd~~~-~~~~---~~~~~~~~v~~~~~~~-~~~~l~~-~~d~~i~iwd~~~~------~~~~~ 223 (349)
.. +++++.++.|++||+++ +... ....+...+.++.++| ++.++++ +.++.|++|+++.. .....
T Consensus 161 ~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 161 SR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp SE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred Cc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 54 66777889999999998 5432 2234456899999999 8877655 56899999999876 55555
Q ss_pred EcCC----------CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCC-CcceeEEEEccCCCeEEEecCCC
Q 018860 224 YNMP----------CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH-HGPVHCVRFSPGGESYASGSEDG 292 (349)
Q Consensus 224 ~~~~----------~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h-~~~i~~l~~sp~~~~l~sgs~Dg 292 (349)
+... ..+..++|+|. +++|++++.|+.|++||+.+++.+..+.+| ..+|.+++ |++++|++|+.||
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPR-HKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTT-TCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred eecccccccccccceeEEEEEEcCC-CCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 5433 26788899984 788999999999999999999999999998 99999999 9999999999999
Q ss_pred C-EEEecC
Q 018860 293 T-IRIWQT 299 (349)
Q Consensus 293 ~-v~vW~~ 299 (349)
+ .+.|..
T Consensus 315 ~~~~~~~~ 322 (342)
T 1yfq_A 315 TFKTNAAI 322 (342)
T ss_dssp HHHHCSSS
T ss_pred cccccccc
Confidence 9 777664
No 63
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.1e-36 Score=273.35 Aligned_cols=270 Identities=21% Similarity=0.357 Sum_probs=220.8
Q ss_pred CeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEE
Q 018860 52 DWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFD 130 (349)
Q Consensus 52 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd 130 (349)
...+++++|...|++++|+|++.+|+|||.|++|+|||..+++..+.+. |...|.+++|+|++.++++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 5678999999999999999999999999999999999999998877765 667899999999999999999999999999
Q ss_pred CCCCCC-----CCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCC--CcEE
Q 018860 131 LNRPDA-----PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQD--GRYI 202 (349)
Q Consensus 131 ~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~--~~~l 202 (349)
+..... ....+..|...+.++.|.+++.. +++++.|++|++||+++++++..+.. ...+.++.++|+ +.++
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCE-EEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 864321 23345678899999999876654 55777789999999999999888875 457889999874 5555
Q ss_pred -EEecCCeEEEEecCCceeeEEEcC-CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCC--CcceeEEEE
Q 018860 203 -TTADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH--HGPVHCVRF 278 (349)
Q Consensus 203 -~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h--~~~i~~l~~ 278 (349)
+++.|++|++||+++..++..+.. ...+.+++|+|. +++|++|+.|++|++||+++++.+..+..+ ...+.+++|
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPS-GDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 556799999999999988887754 456889999985 789999999999999999998877666543 457899999
Q ss_pred ccCCCeEEEecCCCCEEEecCCCCCCCcceeeeccCeeeeeEeChh
Q 018860 279 SPGGESYASGSEDGTIRIWQTGPVTNDDTETLTANGTIGKVKVTAD 324 (349)
Q Consensus 279 sp~~~~l~sgs~Dg~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (349)
+|++.+|++|+.|++|++||+....... ......+.+..+.++++
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~-~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVS-ILFGHENRVSTLRVSPD 337 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEE-EECCCSSCEEEEEECTT
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEE-EEECCCCcEEEEEECCC
Confidence 9999999999999999999986543211 11123445556666654
No 64
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.9e-37 Score=277.16 Aligned_cols=244 Identities=20% Similarity=0.256 Sum_probs=203.9
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
..+.||.++|.+++|+| ++.+|++|+.|+++++|+..+++.+..+.+|...|.+++|+|++.+|++++.|++|++||
T Consensus 70 ~~l~~h~~~V~~~~~~~---~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQ---ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp EEECCCSSCEEEEEECS---STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred chhccCCCceEEEEECC---CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 45789999999999997 889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEe---ccCCeEEEEEEcCCC----------CEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecC
Q 018860 90 ALTGDVLHSF---EHKHIVRACSFSEDT----------HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS 156 (349)
Q Consensus 90 ~~~~~~~~~~---~~~~~v~~~~~s~~~----------~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~ 156 (349)
+......... .|...|.+++|+|++ .+|++++.|+.|++||.. ......+..|...|.+++|+|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 147 ILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp SSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTT
T ss_pred ccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCC
Confidence 9743333322 477889999999987 789999999999999953 2223456788899999999875
Q ss_pred CCeEEEEeeCCCeEEEEECC-CCceEEeecCCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeE--EEc--------
Q 018860 157 DQTILSTCTDMGGVRLWDVR-SGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVK--SYN-------- 225 (349)
Q Consensus 157 ~~~~l~~~~~dg~v~vwd~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~--~~~-------- 225 (349)
+ .+|++++.||.|++||++ .......+.....+.+++|+|++.+++++.|+.|++||+.+..... .+.
T Consensus 225 g-~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T 2xzm_R 225 G-KYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAE 303 (343)
T ss_dssp S-SEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBT
T ss_pred C-CEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhh
Confidence 5 566778888999999994 4445555656667999999999999998889999999998765433 221
Q ss_pred ----CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCC
Q 018860 226 ----MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTG 260 (349)
Q Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~ 260 (349)
+...+.+++|+|. +++|++|+.|+.|++|++.++
T Consensus 304 ~~~~~~~~v~~~~~sp~-g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 304 GQKGKNPQCTSLAWNAL-GKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp TBCCSCCCEEEEEECSS-SCCEEEEETTSEEEEEEEEEE
T ss_pred hhcCCCCceEEEEECCC-CCeEEEecCCceEEEEEEEcc
Confidence 2335678999985 889999999999999998654
No 65
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.9e-36 Score=279.91 Aligned_cols=275 Identities=25% Similarity=0.369 Sum_probs=234.8
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
..+.+|.++|.++.|+ +.+|++|+.|++|++|+..+++.+..+.+|...|.+++|+ +..|++|+.|++|++||
T Consensus 153 ~~~~~h~~~v~~~~~~-----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 153 RTLVGHTGGVWSSQMR-----DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp EECCCCSSCEEEEEEE-----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE
T ss_pred EEEcCCCCCEEEEEec-----CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEE
Confidence 4567999999999997 4589999999999999999999999999999999999995 56799999999999999
Q ss_pred CCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 018860 90 ALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMG 168 (349)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 168 (349)
+.+++.+..+. |...|.+++| +++++++|+.|+.|++||+.+.. ....+..|...+.++.| ++..+++++.||
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~ 299 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF---DGIHVVSGSLDT 299 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE-EEEEECCCSSCEEEEEE---CSSEEEEEETTS
T ss_pred CCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc-EeEEecCCCCceEEEEE---CCCEEEEEeCCC
Confidence 99999888775 7889999999 78899999999999999987543 34456678889999998 456677888889
Q ss_pred eEEEEECCCCceEEeecCC-CCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEc----CCCceEEeeecCCCCCEE
Q 018860 169 GVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYN----MPCTIESASLEPKYGNKF 243 (349)
Q Consensus 169 ~v~vwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 243 (349)
.|++||+++++.+..+..+ ..+.++.+.+ ..+++++.|+.|++||+++..++..+. +...+.++++. ++++
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l 375 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN---KNFV 375 (445)
T ss_dssp CEEEEETTTCCEEEEECCCCSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC---SSEE
T ss_pred eEEEEECCCCCEEEEEcCCcccEEEEEEeC-CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC---CCEE
Confidence 9999999999998888654 4566666643 234456679999999999998888876 34456777774 5799
Q ss_pred EEecCCCeEEEEeCCCCcEEEEe-----cCCCcceeEEEEccCCCeEEEecCCCC----EEEecCCC
Q 018860 244 VAGGEDMWVRFFDFHTGNEIACN-----KGHHGPVHCVRFSPGGESYASGSEDGT----IRIWQTGP 301 (349)
Q Consensus 244 ~~~~~d~~i~v~d~~~~~~~~~~-----~~h~~~i~~l~~sp~~~~l~sgs~Dg~----v~vW~~~~ 301 (349)
++|+.|+.|++||+.+++.+..+ .+|.+.|++++|+|++.+|++|+.||+ |.+||++.
T Consensus 376 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 376 ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 99999999999999999988877 478899999999999999999999998 99999864
No 66
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.3e-36 Score=277.63 Aligned_cols=279 Identities=25% Similarity=0.438 Sum_probs=233.8
Q ss_pred ccccceeeccCCCce-eeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCC
Q 018860 5 KIAVPLVCHGHSRPV-VDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADF 83 (349)
Q Consensus 5 ~~~~~~~~~gh~~~v-~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 83 (349)
+.....++.||.+.| .++.| +|++|++|+.|++|++|+..+++.+..+.+|...|++++|+ +.+|++|+.|+
T Consensus 107 ~~~~~~~l~~h~~~v~~~~~~-----~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg 179 (445)
T 2ovr_B 107 ELKSPKVLKGHDDHVITCLQF-----CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDR 179 (445)
T ss_dssp CCCCCEEEECSTTSCEEEEEE-----ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTS
T ss_pred CcceeEEecccCCCcEEEEEE-----cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCC
Confidence 334556789999876 45444 47899999999999999999999999999999999999997 56899999999
Q ss_pred eEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEE
Q 018860 84 SAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILS 162 (349)
Q Consensus 84 ~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~ 162 (349)
+|++||+.+++.+..+. |...|.+++|+ ++.+++|+.|+.|++||+.+.+ ....+..|...+.++.| ++.+++
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~v~~~~~---~~~~l~ 253 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ-CLHVLMGHVAAVRCVQY---DGRRVV 253 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC-EEEEEECCSSCEEEEEE---CSSCEE
T ss_pred eEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc-EEEEEcCCcccEEEEEE---CCCEEE
Confidence 99999999999888875 88899999995 5689999999999999997643 34456778889999998 445667
Q ss_pred EeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEE-EEecCCeEEEEecCCceeeEEEcCC-CceEEeeecCCC
Q 018860 163 TCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYI-TTADGSTVKFWDANHFGLVKSYNMP-CTIESASLEPKY 239 (349)
Q Consensus 163 ~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l-~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~ 239 (349)
+++.||.|++||+++++++..+.. ...+.++.+ ++.++ +++.|+.|++||+++.+++..+... ..+..+.+.
T Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--- 328 (445)
T 2ovr_B 254 SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--- 328 (445)
T ss_dssp EEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---
T ss_pred EEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe---
Confidence 788889999999999999888874 467888888 55554 5567999999999999888777543 334445543
Q ss_pred CCEEEEecCCCeEEEEeCCCCcEEEEecC---CCcceeEEEEccCCCeEEEecCCCCEEEecCCCCC
Q 018860 240 GNKFVAGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVT 303 (349)
Q Consensus 240 ~~~~~~~~~d~~i~v~d~~~~~~~~~~~~---h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~ 303 (349)
++++++++.|+.|++||+.+++.+..+.+ |..+|.+++|+ +++|++|+.||+|++||+....
T Consensus 329 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 329 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc
Confidence 67999999999999999999999888876 88999999996 5799999999999999987543
No 67
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-37 Score=273.55 Aligned_cols=243 Identities=18% Similarity=0.259 Sum_probs=191.4
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC-------CCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEE
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET-------GDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAK 86 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 86 (349)
+|.++|.+++|+| ++++|++|+.|++|++|+... .+++..+++|...|.+++|+|++++|+||+.|++|+
T Consensus 56 ~h~~~v~~v~~sp---~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~ 132 (330)
T 2hes_X 56 AHKKAIRSVAWRP---HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVW 132 (330)
T ss_dssp CCCSCEEEEEECT---TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEE
T ss_pred CccCCEEEEEECC---CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 4999999999997 889999999999999999742 356788999999999999999999999999999999
Q ss_pred EEECCC-C---CEEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCC-CCCceeccCCCCeEEEEEecCC-Ce
Q 018860 87 VWDALT-G---DVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD-APPREVDRSPGSVRTVAWLHSD-QT 159 (349)
Q Consensus 87 vWd~~~-~---~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~-~~~~~~~~~~~~i~~~~~~~~~-~~ 159 (349)
+||+.. + +++..+ .|...|.+++|+|++.+|++|+.|++|++||+.... .....+.+|...|.++.|+|.. ..
T Consensus 133 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 133 IWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp EEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred EEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee
Confidence 999943 2 345555 488899999999999999999999999999976432 2334567899999999999864 45
Q ss_pred EEEEeeCCCeEEEEECCCC--------ceEEeec--CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCce--eeEEE--c
Q 018860 160 ILSTCTDMGGVRLWDVRSG--------EIVQTLE--TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFG--LVKSY--N 225 (349)
Q Consensus 160 ~l~~~~~dg~v~vwd~~~~--------~~~~~~~--~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~--~~~~~--~ 225 (349)
++++++.|++|++||++.+ .+...+. +...+.+++|++++.+++++.|+.|++||..+.. ..... .
T Consensus 213 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 292 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALC 292 (330)
T ss_dssp EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCT
T ss_pred EEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccc
Confidence 7788889999999998764 3344443 4568999999988878888899999999987653 23222 2
Q ss_pred CCC-ceEEeeecCC-CCCEEEEecCCCeEEEEeCCC
Q 018860 226 MPC-TIESASLEPK-YGNKFVAGGEDMWVRFFDFHT 259 (349)
Q Consensus 226 ~~~-~~~~~~~~~~-~~~~~~~~~~d~~i~v~d~~~ 259 (349)
+.. .+..++|.|. ++++|++|+.|++|++||+..
T Consensus 293 h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 293 HGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 333 5788899885 477899999999999999864
No 68
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=271.47 Aligned_cols=272 Identities=19% Similarity=0.314 Sum_probs=212.4
Q ss_pred CCeEEEeecccC-CeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEE--EEe--ccCCeEEEEEEcCCCCEEEEEeCCCe
Q 018860 51 GDWIGTFEGHKG-AVWSCCLDTNALRAASASADFSAKVWDALTGDVL--HSF--EHKHIVRACSFSEDTHLLLTGGMEKI 125 (349)
Q Consensus 51 ~~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~--~~~--~~~~~v~~~~~s~~~~~l~s~~~d~~ 125 (349)
.+++.++++|.. .|++++|+|++++|+||+.|++|+|||+.++... ..+ .|...|++++|+|++++|++|+.|++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 356788999988 9999999999999999999999999999877533 222 48889999999999999999999999
Q ss_pred EEEEECCCCCC-CCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCc---eEEeec-CCCCeeEEEEcCCCc
Q 018860 126 LRIFDLNRPDA-PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE---IVQTLE-TKSPVTSAEVSQDGR 200 (349)
Q Consensus 126 i~lwd~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~-~~~~v~~~~~~~~~~ 200 (349)
+++|++..... ....+.+|...|.+++|+|+ +.+|++++.|++|++||++++. ++..+. +...+.++.|+|++.
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 99999875432 23456789999999999875 4567788888999999998764 344444 456799999999998
Q ss_pred EEEE-ecCCeEEEEecCCceee--EEE-cCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCC---------------c
Q 018860 201 YITT-ADGSTVKFWDANHFGLV--KSY-NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTG---------------N 261 (349)
Q Consensus 201 ~l~~-~~d~~i~iwd~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~---------------~ 261 (349)
+|++ +.|++|++||.+..... ..+ .+...+..++|+|. +++|++++.|++|++||.... +
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~-g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~ 242 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPS-GQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWK 242 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCC-CCEEEEEeCCCeEEEeccccCCCCccceeeccCCccc
Confidence 7654 56999999999876432 333 34567889999985 899999999999999996321 2
Q ss_pred EEEEecC-CCcceeEEEEccCCCeEEEecCCCCEEEecCCCCCCCcce--ee------eccCeeeeeEeChh
Q 018860 262 EIACNKG-HHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPVTNDDTE--TL------TANGTIGKVKVTAD 324 (349)
Q Consensus 262 ~~~~~~~-h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~~~~~~--~~------~~~~~~~~~~~~~~ 324 (349)
.+..+.+ |...|++++|+|++..|++++.|++|++|+.......... .+ .+.+.+..+.+.+.
T Consensus 243 ~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~ 314 (345)
T 3fm0_A 243 CICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPK 314 (345)
T ss_dssp EEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSS
T ss_pred eeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCC
Confidence 2334444 8899999999999999999999999999987654322111 11 12345666677664
No 69
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.3e-36 Score=289.55 Aligned_cols=307 Identities=13% Similarity=0.198 Sum_probs=234.4
Q ss_pred eeeccCCCceeeEEEeecCCCcc-EEEEEecCCCeEEEeCCCCCeEEEeecccC---CeEEEEECCC-CCeeEEeeCCCe
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGF-FLISASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDTN-ALRAASASADFS 84 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~-~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~---~v~~~~~~~~-~~~l~s~s~D~~ 84 (349)
..+.+|.+.|.++.|+| ++. +|++++.|+.+++|+..+++.+..+.+|.. .|.+++|+|+ +.+|++++.|+.
T Consensus 154 ~~~~~~~~~v~~~~~~~---~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 154 GEVSGHSQRINACHLKQ---SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK 230 (615)
T ss_dssp EECCSCSSCEEEEEECS---SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC
T ss_pred eeeecCCccEEEEEECC---CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe
Confidence 34578999999999997 666 899999999999999999999999999999 9999999999 999999999999
Q ss_pred EEEEECCCCCEEEEe-----ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCC---------------------
Q 018860 85 AKVWDALTGDVLHSF-----EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP--------------------- 138 (349)
Q Consensus 85 i~vWd~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~--------------------- 138 (349)
|++||+.+++.+..+ .|...|.+++|+ ++.+|++++.|+.|++||+.+.....
T Consensus 231 i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (615)
T 1pgu_A 231 ISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN 309 (615)
T ss_dssp EEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEET
T ss_pred EEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCC
Confidence 999999999999988 788999999999 99999999999999999987432100
Q ss_pred -----------------------ceeccCCCCeE---------------------------------EEEEecCCCeEEE
Q 018860 139 -----------------------REVDRSPGSVR---------------------------------TVAWLHSDQTILS 162 (349)
Q Consensus 139 -----------------------~~~~~~~~~i~---------------------------------~~~~~~~~~~~l~ 162 (349)
..+..|...+. ++.| +++. .++
T Consensus 310 ~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~-~l~ 387 (615)
T 1pgu_A 310 GRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQ-EYS 387 (615)
T ss_dssp TEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTT-CCE
T ss_pred CeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCc-EEE
Confidence 01112223333 3333 1122 333
Q ss_pred EeeCCCeEEEEECC----------------------------------CCceEEeecCCCCeeEEEEcCCCcEE-EEec-
Q 018860 163 TCTDMGGVRLWDVR----------------------------------SGEIVQTLETKSPVTSAEVSQDGRYI-TTAD- 206 (349)
Q Consensus 163 ~~~~dg~v~vwd~~----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~- 206 (349)
+++.|+.|++||++ +++.+..+.+...+.+++++ +.++ +++.
T Consensus 388 ~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~ 465 (615)
T 1pgu_A 388 SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEE 465 (615)
T ss_dssp EEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETT
T ss_pred EEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecC
Confidence 44445555555543 33344444455567777777 4444 5566
Q ss_pred CCeEEEEecCCceee-EE-EcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecC-CCcceeEEEEcc---
Q 018860 207 GSTVKFWDANHFGLV-KS-YNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG-HHGPVHCVRFSP--- 280 (349)
Q Consensus 207 d~~i~iwd~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~-h~~~i~~l~~sp--- 280 (349)
++.|++||+.+.... .. ..+...+..++|+|. +++|++++.|+.|++||+.+++.+..+.+ |...|++++|+|
T Consensus 466 d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 544 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS-ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEK 544 (615)
T ss_dssp TSCEEEEETTEEEEEEECSSCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-
T ss_pred CCeEEEEECCCccccccccCCccCceEEEEECCC-CCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccc
Confidence 899999999887654 22 233456888999985 89999999999999999999999988888 999999999999
Q ss_pred -------CCCeEEEecCCCCEEEecCCCCCCCcceeeeccCeeeeeEeChhh
Q 018860 281 -------GGESYASGSEDGTIRIWQTGPVTNDDTETLTANGTIGKVKVTADE 325 (349)
Q Consensus 281 -------~~~~l~sgs~Dg~v~vW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (349)
++++|++|+.||+|++|++............+.+.+..+.+.++.
T Consensus 545 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 596 (615)
T 1pgu_A 545 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS 596 (615)
T ss_dssp -----CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT
T ss_pred cccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCC
Confidence 999999999999999999865421111111123455556665543
No 70
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.9e-36 Score=288.89 Aligned_cols=279 Identities=19% Similarity=0.184 Sum_probs=244.6
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCC----CeEEEeecccCC-eEEEEECC--CCCeeEEeeCCCeE
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETG----DWIGTFEGHKGA-VWSCCLDT--NALRAASASADFSA 85 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~----~~~~~~~~h~~~-v~~~~~~~--~~~~l~s~s~D~~i 85 (349)
..|.+.|.+++|+| +|++|++++ ++.+++|+..++ +.+..+.+|... |.+++|+| ++++|++++.|+.|
T Consensus 15 ~~~~~~v~~~~~sp---dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v 90 (615)
T 1pgu_A 15 STQRNFTTHLSYDP---TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKV 90 (615)
T ss_dssp CCCTTCCCCCEEET---TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEE
T ss_pred CCccCceeEEEECC---CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEE
Confidence 57999999999997 899999988 899999999988 899999999999 99999999 99999999999999
Q ss_pred EEEECCCC--------CEEEEec-cCCeEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCCCCCceeccCCCCeEEEE
Q 018860 86 KVWDALTG--------DVLHSFE-HKHIVRACSFSEDTHLLLTGGME----KILRIFDLNRPDAPPREVDRSPGSVRTVA 152 (349)
Q Consensus 86 ~vWd~~~~--------~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d----~~i~lwd~~~~~~~~~~~~~~~~~i~~~~ 152 (349)
++||+.++ +.+..+. |...|.+++|+|++++|++++.+ +.|++||.. .....+..|...+.++.
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~---~~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG---NSLGEVSGHSQRINACH 167 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC---CEEEECCSCSSCEEEEE
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC---CcceeeecCCccEEEEE
Confidence 99999754 4555554 78899999999999999999988 688888842 23456678889999999
Q ss_pred EecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-CC---CeeEEEEcCC-CcEEEE-ecCCeEEEEecCCceeeEEE--
Q 018860 153 WLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KS---PVTSAEVSQD-GRYITT-ADGSTVKFWDANHFGLVKSY-- 224 (349)
Q Consensus 153 ~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~---~v~~~~~~~~-~~~l~~-~~d~~i~iwd~~~~~~~~~~-- 224 (349)
|+|.+..++++++.|+.|++||+++++.+..+.. .. .+.++.|+|+ ++++++ +.|+.|++||+++.+.+..+
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 247 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED 247 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecc
Confidence 9988877788888999999999999999888874 44 6999999999 887665 56999999999999988888
Q ss_pred ---cCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCC----CcceeEEEEccCCCeEEEecCCCCEEEe
Q 018860 225 ---NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH----HGPVHCVRFSPGGESYASGSEDGTIRIW 297 (349)
Q Consensus 225 ---~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h----~~~i~~l~~sp~~~~l~sgs~Dg~v~vW 297 (349)
.+...+..+.|. +++++++++.|+.|++||+.+++.+..+..+ ...+.++.|+ ++.+|++|+.||.|++|
T Consensus 248 ~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~ 324 (615)
T 1pgu_A 248 DQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFY 324 (615)
T ss_dssp TTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEE
T ss_pred cccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEE
Confidence 556678888888 5899999999999999999999988887766 4778888885 88999999999999999
Q ss_pred cCCC
Q 018860 298 QTGP 301 (349)
Q Consensus 298 ~~~~ 301 (349)
++..
T Consensus 325 d~~~ 328 (615)
T 1pgu_A 325 ELGH 328 (615)
T ss_dssp ETTE
T ss_pred ECCC
Confidence 9864
No 71
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.4e-36 Score=272.22 Aligned_cols=240 Identities=23% Similarity=0.380 Sum_probs=202.6
Q ss_pred cccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccC-------------------CeEEEEEEcCCCCEEEE
Q 018860 59 GHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHK-------------------HIVRACSFSEDTHLLLT 119 (349)
Q Consensus 59 ~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~-------------------~~v~~~~~s~~~~~l~s 119 (349)
+|...|.+++|+|++++|++|+ |+.+++|++.+++.+..+... ..|++++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999976 789999999999887766421 14899999999999999
Q ss_pred EeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcC-C
Q 018860 120 GGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQ-D 198 (349)
Q Consensus 120 ~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~-~ 198 (349)
|+.|+.|++||+.+.+ ....+.+|...|.+++|+|.+. .+++++.|++|++||++++++...+.....+.++.++| +
T Consensus 141 ~~~d~~i~iwd~~~~~-~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 141 GAEDRLIRIWDIENRK-IVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 218 (393)
T ss_dssp EETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT
T ss_pred EcCCCeEEEEECCCCc-EEEEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCC
Confidence 9999999999997543 3445678999999999987665 55677788999999999999988888888899999999 7
Q ss_pred CcEEEE-ecCCeEEEEecCCceeeEEE--------cCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCC---------
Q 018860 199 GRYITT-ADGSTVKFWDANHFGLVKSY--------NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTG--------- 260 (349)
Q Consensus 199 ~~~l~~-~~d~~i~iwd~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~--------- 260 (349)
++++++ +.|+.|++||+++...+..+ .+...+.+++|.|. ++++++|+.|+.|++||+.+.
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~-g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD-GQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT-SSEEEEEETTSEEEEEEC------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 777654 56999999999988776655 23456788999984 889999999999999999753
Q ss_pred ---cEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 261 ---NEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 261 ---~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
.....+.+|...|.+++|+|++.+|++|+.||+|++||+...
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 334567799999999999999999999999999999998654
No 72
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-35 Score=259.05 Aligned_cols=249 Identities=24% Similarity=0.393 Sum_probs=211.7
Q ss_pred CCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEE
Q 018860 51 GDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIF 129 (349)
Q Consensus 51 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lw 129 (349)
.....++.+|...|.+++|+|++++|++|+.|+.|++|+..+++....+. |...|.+++|+|++++|++++.|+.|++|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 34677889999999999999999999999999999999999998887775 88899999999999999999999999999
Q ss_pred ECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecC
Q 018860 130 DLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADG 207 (349)
Q Consensus 130 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d 207 (349)
|+.... ....+..|...+.++.|.|.+ .++++++.|+.|++||+++++.+..+.. ..++.++.++|++.++++ +.|
T Consensus 93 d~~~~~-~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 93 DVSSGK-CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp ETTTCC-EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ECCCCc-EEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 997643 345567888999999998755 4566778889999999999998888765 468999999999987654 569
Q ss_pred CeEEEEecCCceeeEEEcC--CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeE---EEEccCC
Q 018860 208 STVKFWDANHFGLVKSYNM--PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC---VRFSPGG 282 (349)
Q Consensus 208 ~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~---l~~sp~~ 282 (349)
+.|++||+++...+..+.. ...+..++|+|. ++++++++.|+.|++||+.+++.+..+.+|...+.+ ....+++
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN-GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSSCCCEEEEEECTT-SSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred CcEEEEECCCCceeeEEeccCCCceEEEEECCC-CCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 9999999999887776543 335677888885 889999999999999999999999988888765433 3334678
Q ss_pred CeEEEecCCCCEEEecCCCC
Q 018860 283 ESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 283 ~~l~sgs~Dg~v~vW~~~~~ 302 (349)
.+|++|+.||.|++||+...
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp CEEEECCTTSCEEEEETTTC
T ss_pred cEEEEECCCCEEEEEECCCc
Confidence 89999999999999998654
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-36 Score=272.49 Aligned_cols=251 Identities=19% Similarity=0.288 Sum_probs=198.1
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCC--CCCeEEEeecccCCeEEEEECCC--CCeeEEeeCCCeE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLDTN--ALRAASASADFSA 85 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i 85 (349)
.++.||.++|.+++|+| ++++|++|+.|+.|++|+.. +++.+..+.+|...|++++|+++ +.+|++|+.|+.|
T Consensus 5 ~~~~~h~~~v~~~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp CCEEECCCCEEEEEECS---SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred EEecCCcccEEEEEEcC---CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 45789999999999997 89999999999999999987 55678899999999999999877 8999999999999
Q ss_pred EEEECCCCC--EEEEec-cCCeEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCCCC-CceeccCCCCeEEEEEecC---
Q 018860 86 KVWDALTGD--VLHSFE-HKHIVRACSFSED--THLLLTGGMEKILRIFDLNRPDAP-PREVDRSPGSVRTVAWLHS--- 156 (349)
Q Consensus 86 ~vWd~~~~~--~~~~~~-~~~~v~~~~~s~~--~~~l~s~~~d~~i~lwd~~~~~~~-~~~~~~~~~~i~~~~~~~~--- 156 (349)
++||+.+++ .+..+. |...|.+++|+|+ +.+|++++.|+.|++||+...... ...+..|...+.++.|.|.
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 999999886 444443 7889999999999 999999999999999999865432 2345678889999999985
Q ss_pred ---------CCeEEEEeeCCCeEEEEECCCCce----EEeec-CCCCeeEEEEcCC---CcEEEE-ecCCeEEEEecCCc
Q 018860 157 ---------DQTILSTCTDMGGVRLWDVRSGEI----VQTLE-TKSPVTSAEVSQD---GRYITT-ADGSTVKFWDANHF 218 (349)
Q Consensus 157 ---------~~~~l~~~~~dg~v~vwd~~~~~~----~~~~~-~~~~v~~~~~~~~---~~~l~~-~~d~~i~iwd~~~~ 218 (349)
++.++++++.||.|++||++++.. ...+. +...+.+++|+|+ +.++++ +.|+.|++||++..
T Consensus 162 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp --------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 567777888889999999987642 23333 3456777777776 444433 33555555555432
Q ss_pred eeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 219 GLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
.... ...+.....|...|++++|+|++++|++++.||.|++|+
T Consensus 242 ~~~~-------------------------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 242 QGPW-------------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp TSCC-------------------------------------EEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred Cccc-------------------------------------eeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 1000 001112244888999999999999999999999999999
Q ss_pred CC
Q 018860 299 TG 300 (349)
Q Consensus 299 ~~ 300 (349)
+.
T Consensus 285 ~~ 286 (379)
T 3jrp_A 285 EN 286 (379)
T ss_dssp EE
T ss_pred CC
Confidence 76
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.9e-36 Score=309.65 Aligned_cols=288 Identities=22% Similarity=0.375 Sum_probs=242.1
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECC--CCCeeEEeeCCCeEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDT--NALRAASASADFSAKV 87 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~i~v 87 (349)
..+.+|.++|.+++|+| +|++|++++.|++|++|+..+++.+.++.+|...|.+++|++ ++.++++|+.|+.|++
T Consensus 651 ~~~~~h~~~v~~~~~s~---~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 651 LDIKAHEDEVLCCAFSS---DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred EEeccCCCCEEEEEEec---CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 45679999999999997 899999999999999999999999999999999999999999 5668999999999999
Q ss_pred EECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCC----------------------------
Q 018860 88 WDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP---------------------------- 138 (349)
Q Consensus 88 Wd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~---------------------------- 138 (349)
||+.+++++..+. |...|.+++|+|+++++++++.|+.|++||+.......
T Consensus 728 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp EETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred EECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence 9999999888764 88899999999999999999999999999985431100
Q ss_pred --------------------------ceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-CCCee
Q 018860 139 --------------------------REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVT 191 (349)
Q Consensus 139 --------------------------~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~ 191 (349)
.....|...+.+++|+|.+. ++++++.+|.|++||+.++..+..+.. ...+.
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~ 886 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDSRLKVADCRGHLSWVH 886 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceeeecCCCccceE
Confidence 00115667788899887655 555677779999999999988887765 45799
Q ss_pred EEEEcCCCcEEE-EecCCeEEEEecCCcee-----------------------------e---------EEEcCCCceEE
Q 018860 192 SAEVSQDGRYIT-TADGSTVKFWDANHFGL-----------------------------V---------KSYNMPCTIES 232 (349)
Q Consensus 192 ~~~~~~~~~~l~-~~~d~~i~iwd~~~~~~-----------------------------~---------~~~~~~~~~~~ 232 (349)
++.|+|++.+++ ++.|+.|++||+.+... . ........+..
T Consensus 887 ~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 966 (1249)
T 3sfz_A 887 GVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSC 966 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEE
T ss_pred EEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEE
Confidence 999999998765 56799999999753110 0 00111234667
Q ss_pred eeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
++++|. ++++++|+.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.||+|++|++...
T Consensus 967 ~~~sp~-g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 967 CCLSPH-LEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp EEECTT-SSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTT
T ss_pred EEEcCC-CCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 788884 889999999999999999999999999999999999999999999999999999999998653
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.7e-35 Score=271.81 Aligned_cols=276 Identities=20% Similarity=0.309 Sum_probs=227.4
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEEC--CCCCeeEEeeCCCeEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD--TNALRAASASADFSAKV 87 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~s~s~D~~i~v 87 (349)
..+.+|.++|.+++|+| ++ +|++|+.|+++++|+..+++.+..+.+|...|.+++|+ +++.+|++|+.|++|++
T Consensus 156 ~~~~~h~~~V~~l~~~~---~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v 231 (464)
T 3v7d_B 156 LQLSGHDGGVWALKYAH---GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 231 (464)
T ss_dssp EEECCCSSCEEEEEECS---TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEE
T ss_pred EEEeCCCcCEEEEEEcC---CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEE
Confidence 45679999999999986 55 89999999999999999999999999999999999998 57789999999999999
Q ss_pred EECCCCCEE-----------------------EEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceecc
Q 018860 88 WDALTGDVL-----------------------HSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDR 143 (349)
Q Consensus 88 Wd~~~~~~~-----------------------~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~ 143 (349)
||+.++... ..+ .|...|.++ +++++++++|+.|+.|++||+.+.. ....+..
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~ 308 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMK-CLYILSG 308 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTE-EEEEECC
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCc-EEEEecC
Confidence 999877532 222 366667665 6788999999999999999997543 3445677
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeE
Q 018860 144 SPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVK 222 (349)
Q Consensus 144 ~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~ 222 (349)
|...+.++.|.|.+. .+++++.||.|++||+++++++..+.. ...+.++.+++ ..+++++.|+.|++||+++.....
T Consensus 309 ~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 309 HTDRIYSTIYDHERK-RCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp CSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCceee
Confidence 889999999997655 556777889999999999999988864 56788999874 455666789999999999887777
Q ss_pred EEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEE-ecCCCcceeEEEEccCCCeEEEecCCCCEEEe
Q 018860 223 SYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIAC-NKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297 (349)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~-~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW 297 (349)
..........+++.+. ++++++++ |+.|++||+.+++.+.. ...|...|++++|+ +..++++++.||.+.+|
T Consensus 387 ~~~~~~~~~~~~~~~~-~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 387 SYHHTNLSAITTFYVS-DNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEECTTCCCEEEEEEC-SSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred eecCCCCccEEEEEeC-CCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 6666666666777774 77888887 89999999999999875 67889999999997 44456677778876665
No 76
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2e-35 Score=288.06 Aligned_cols=243 Identities=24% Similarity=0.333 Sum_probs=209.9
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
..+.||.+.|.+++|+| +|++|++|+.|++|++|+..++..++.+.+|...|.+++|++++.+|+||+.|++|++||
T Consensus 424 ~~~~~h~~~v~~v~~s~---~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSS---DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 500 (694)
T ss_dssp EEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ceecCCCCcEEEEEECC---CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 45789999999999997 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEe----ccCCeEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 90 ALTGDVLHSF----EHKHIVRACSFSEDT--HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 90 ~~~~~~~~~~----~~~~~v~~~~~s~~~--~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
.......... .|...|.+++|+|++ ..+++++.|++|++||+.... ....+.+|.+.|.+++|+|++ .++++
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~-~~~~~~~h~~~v~~v~~spdg-~~l~s 578 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDG-SLCAS 578 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC-EEEEECCCSSCEEEEEECTTS-SEEEE
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEeCCC-CEEEE
Confidence 8654333322 377889999999986 589999999999999997543 345667899999999998754 56778
Q ss_pred eeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcCCC---------------
Q 018860 164 CTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPC--------------- 228 (349)
Q Consensus 164 ~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~--------------- 228 (349)
++.||+|++||+++++.+..+..+..+.+++|+|++.+++++.++.|++||+++...+..+....
T Consensus 579 g~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAAT 658 (694)
T ss_dssp EETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC--------------
T ss_pred EeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccC
Confidence 88889999999999999988888888999999999999999888899999999988776654211
Q ss_pred -----ceEEeeecCCCCCEEEEecCCCeEEEEeCC
Q 018860 229 -----TIESASLEPKYGNKFVAGGEDMWVRFFDFH 258 (349)
Q Consensus 229 -----~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 258 (349)
.+.+++|+| ++++|++|+.|+.|++|++.
T Consensus 659 ~~~~~~~~~l~~sp-dg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 659 KRKVIYCTSLNWSA-DGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --CCCCEEEEEECT-TSSEEEEEETTSEEEEEEC-
T ss_pred CceeEEeeeEEEcC-CCCEEEEEcCCCeEEEEecc
Confidence 145678888 48999999999999999985
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-36 Score=297.97 Aligned_cols=281 Identities=12% Similarity=0.133 Sum_probs=211.5
Q ss_pred CCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeE-----------EEeecccCCeEEEEECCC-CCeeEEeeCC
Q 018860 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWI-----------GTFEGHKGAVWSCCLDTN-ALRAASASAD 82 (349)
Q Consensus 15 h~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~-----------~~~~~h~~~v~~~~~~~~-~~~l~s~s~D 82 (349)
|.+.|++++|+| ++++|++|+.||+|++|+..++++. ..+++|..+|++++|+|+ +..|++|+.|
T Consensus 97 ~~~~V~~v~~sp---~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d 173 (902)
T 2oaj_A 97 VPGKITSIDTDA---SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY 173 (902)
T ss_dssp CSSCEEEEECCT---TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS
T ss_pred CCCCEEEEEECC---CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC
Confidence 678899999997 8999999999999999999887653 345789999999999996 4689999999
Q ss_pred CeEEEEECCCCCEEEEecc-------------------CCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCC-cee-
Q 018860 83 FSAKVWDALTGDVLHSFEH-------------------KHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP-REV- 141 (349)
Q Consensus 83 ~~i~vWd~~~~~~~~~~~~-------------------~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~-~~~- 141 (349)
+.| +||+.++++++.+.. ...|.+++|+|+|.+|++|+.|++|++||+.+.+... +.+
T Consensus 174 g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~ 252 (902)
T 2oaj_A 174 VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVF 252 (902)
T ss_dssp CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSS
T ss_pred CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeec
Confidence 999 999999988877753 3679999999999999999999999999997643211 011
Q ss_pred --c-------------cCCCCeEEEEEecC----CCeEEEEeeC------------------------------------
Q 018860 142 --D-------------RSPGSVRTVAWLHS----DQTILSTCTD------------------------------------ 166 (349)
Q Consensus 142 --~-------------~~~~~i~~~~~~~~----~~~~l~~~~~------------------------------------ 166 (349)
. .+...|.+++|.+. ++.++++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~ 332 (902)
T 2oaj_A 253 ETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPK 332 (902)
T ss_dssp CSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCS
T ss_pred ccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCcc
Confidence 0 12346888888642 2244544432
Q ss_pred ----------------------------------------CCeEEEEECCCCceEEe-------ec-CCCCee-------
Q 018860 167 ----------------------------------------MGGVRLWDVRSGEIVQT-------LE-TKSPVT------- 191 (349)
Q Consensus 167 ----------------------------------------dg~v~vwd~~~~~~~~~-------~~-~~~~v~------- 191 (349)
+|+|++||+.++..... +. ++..++
T Consensus 333 ~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~ 412 (902)
T 2oaj_A 333 QMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASV 412 (902)
T ss_dssp EEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEE
T ss_pred ceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEc
Confidence 24455555544422111 00 012233
Q ss_pred ---------------------------EEEEcCCCcEEEE-ecCCeEEEEecCCceee--EEE----------cCCCceE
Q 018860 192 ---------------------------SAEVSQDGRYITT-ADGSTVKFWDANHFGLV--KSY----------NMPCTIE 231 (349)
Q Consensus 192 ---------------------------~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~--~~~----------~~~~~~~ 231 (349)
.++|+|+++++++ +.|++|++||+.+.... ..+ .+...+.
T Consensus 413 ~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~ 492 (902)
T 2oaj_A 413 PNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVD 492 (902)
T ss_dssp EHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEE
T ss_pred CHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCcee
Confidence 3345678877654 67999999999776321 111 2345688
Q ss_pred EeeecCCCCCEEEEecCCCeEEEEeCCCCc---------------------------------------------EEEEe
Q 018860 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGN---------------------------------------------EIACN 266 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~---------------------------------------------~~~~~ 266 (349)
+++|+|. +++|++|+.|++|++||+.+++ ++..+
T Consensus 493 svafspd-g~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l 571 (902)
T 2oaj_A 493 KISFAAE-TLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAV 571 (902)
T ss_dssp EEEEETT-TTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEE
T ss_pred EEEecCC-CCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEE
Confidence 9999985 8999999999999999997662 35677
Q ss_pred cCCCcceeEEEEccCCCeEEEecCCCCEEEecCCC
Q 018860 267 KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 267 ~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
.+|.++|++|+|||+| +||+|+.|++|+|||+..
T Consensus 572 ~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~ 605 (902)
T 2oaj_A 572 HANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRG 605 (902)
T ss_dssp CCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTT
T ss_pred EcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCC
Confidence 8999999999999999 999999999999999854
No 78
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=279.93 Aligned_cols=268 Identities=13% Similarity=0.229 Sum_probs=214.9
Q ss_pred CCCccEEEEEecCCCeEEEeCCCCCeEEEe-ecccCCeEEEEECC-CCCeeEEeeCCCeEEEEECCC---CC---EEEEe
Q 018860 28 TPDGFFLISASKDSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDT-NALRAASASADFSAKVWDALT---GD---VLHSF 99 (349)
Q Consensus 28 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vWd~~~---~~---~~~~~ 99 (349)
+++++.+++++ .|+ .+++.+.++ ++|.+.|++++|++ ++.+|+||+.|++|+|||+.+ +. ....+
T Consensus 36 ~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~ 108 (437)
T 3gre_A 36 GPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY 108 (437)
T ss_dssp CCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE
T ss_pred CCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec
Confidence 45777776655 487 457888999 99999999999999 999999999999999999876 33 45556
Q ss_pred ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--CCCCcee----------cc--CCCCeEEEEEe-cCCCeEEEEe
Q 018860 100 EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP--DAPPREV----------DR--SPGSVRTVAWL-HSDQTILSTC 164 (349)
Q Consensus 100 ~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~--~~~~~~~----------~~--~~~~i~~~~~~-~~~~~~l~~~ 164 (349)
.|...|.+++|+|++++|++|+.|+.|++||+... ....... .. +...+.++.+. .+++.+++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 78999999999999999999999999999998411 1111111 11 44556666543 2456788888
Q ss_pred eCCCeEEEEECCCCceEEeecC---CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEc--CCCceEEeeecCC
Q 018860 165 TDMGGVRLWDVRSGEIVQTLET---KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYN--MPCTIESASLEPK 238 (349)
Q Consensus 165 ~~dg~v~vwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~ 238 (349)
+.||.|++||+++++++..+.. ...+.+++|+|++.++++ +.|+.|++||+++..++..+. ....+..+++.|.
T Consensus 189 ~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 189 TNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred eCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 9999999999999999888864 568999999999987765 569999999999999888774 3445777866653
Q ss_pred ---CCCEEEEecCCCeEEEEeCCCCcEEEEecC--------------------------CCcceeEEEEccCCCeEEEec
Q 018860 239 ---YGNKFVAGGEDMWVRFFDFHTGNEIACNKG--------------------------HHGPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 239 ---~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~--------------------------h~~~i~~l~~sp~~~~l~sgs 289 (349)
++.++++++.|+.|++||+.+++.+..+.+ |..+|++++|+ ++++|++|+
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~ 347 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE 347 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecC
Confidence 456899999999999999999987766543 56678899999 778999999
Q ss_pred CCCCEEEecCCCCC
Q 018860 290 EDGTIRIWQTGPVT 303 (349)
Q Consensus 290 ~Dg~v~vW~~~~~~ 303 (349)
.||+|++||+....
T Consensus 348 ~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 348 ATSSIVMFSLNELS 361 (437)
T ss_dssp GGTEEEEEETTCGG
T ss_pred CCCeEEEEECCCcc
Confidence 99999999987553
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.4e-36 Score=274.69 Aligned_cols=276 Identities=17% Similarity=0.283 Sum_probs=219.3
Q ss_pred ceeeEEEeecCCCcc-EEEEEecCCCeEEEeCCCC----CeEEEeecccCCeEEEEECC-CCCeeEEeeCCCeEEEEECC
Q 018860 18 PVVDLFYSPITPDGF-FLISASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDT-NALRAASASADFSAKVWDAL 91 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~-~l~s~s~d~~i~iw~~~~~----~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vWd~~ 91 (349)
....++++| +.. ++++++.||.|++|+.... ..+..+.+|...|.+++|+| ++.+|++|+.|++|+|||+.
T Consensus 36 ~~~~~~~~~---~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 36 DSGFCAVNP---KFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp SSCSEEECS---SEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred CCCcEEECC---CeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 344577776 433 4456899999999998654 34567889999999999999 99999999999999999998
Q ss_pred CC-------CEEEEec-cCCeEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCCCCcee--ccCCCCeEEEEEecCCCeE
Q 018860 92 TG-------DVLHSFE-HKHIVRACSFSEDT-HLLLTGGMEKILRIFDLNRPDAPPREV--DRSPGSVRTVAWLHSDQTI 160 (349)
Q Consensus 92 ~~-------~~~~~~~-~~~~v~~~~~s~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~ 160 (349)
++ +.+..+. |...|.+++|+|++ ++|++++.|+.|++||+..... ...+ ..|...+.+++|+|.+ .+
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~ 190 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA-VLTLGPDVHPDTIYSVDWSRDG-AL 190 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE-EEEECTTTCCSCEEEEEECTTS-SC
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc-cEEEecCCCCCceEEEEECCCC-CE
Confidence 87 4455554 88999999999998 7999999999999999976433 3344 6788999999999855 45
Q ss_pred EEEeeCCCeEEEEECCCCceEEee-cCC-C-CeeEEEEcCCCcEEEEe----cCCeEEEEecCCcee-eE--EEcCCCce
Q 018860 161 LSTCTDMGGVRLWDVRSGEIVQTL-ETK-S-PVTSAEVSQDGRYITTA----DGSTVKFWDANHFGL-VK--SYNMPCTI 230 (349)
Q Consensus 161 l~~~~~dg~v~vwd~~~~~~~~~~-~~~-~-~v~~~~~~~~~~~l~~~----~d~~i~iwd~~~~~~-~~--~~~~~~~~ 230 (349)
+++++.||.|++||+++++.+..+ ..+ . .+..+.|+|++++++++ .++.|++||+++... +. .+.....+
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 270 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV 270 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC
T ss_pred EEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce
Confidence 567777899999999999988887 333 3 37899999999998876 689999999988654 22 33445567
Q ss_pred EEeeecCCCCCEEE-EecCCCeEEEEeCCCCcE-EEEecC--CCcceeEEEEccCCCeEEEecCCCCEEEecCCC
Q 018860 231 ESASLEPKYGNKFV-AGGEDMWVRFFDFHTGNE-IACNKG--HHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 231 ~~~~~~~~~~~~~~-~~~~d~~i~v~d~~~~~~-~~~~~~--h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
..++|+|. ++.++ +++.|+.|++||+.+++. +..+.. |..+|.+++|+|++.++++ .|+.+++|++..
T Consensus 271 ~~~~~s~~-~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 271 LLPFFDPD-TNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp EEEEEETT-TTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred eEEEEcCC-CCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 88899985 66665 566899999999998873 333333 5699999999999988764 567999999754
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.6e-34 Score=286.04 Aligned_cols=288 Identities=19% Similarity=0.267 Sum_probs=235.5
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
..+.+|.++|.++.|+| ++++|++++.|+.|++|+..+++.+..+.+|...|++++|+|++.+|++++.|+.|++||
T Consensus 49 ~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 49 RSIQVTETPVRAGKFIA---RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEEECCSSCEEEEEEEG---GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred EEEecCCCcEEEEEEeC---CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 35578999999999998 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-CEEEEe-ccCCeEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecC-CCeEEEEee
Q 018860 90 ALTG-DVLHSF-EHKHIVRACSFSE-DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHS-DQTILSTCT 165 (349)
Q Consensus 90 ~~~~-~~~~~~-~~~~~v~~~~~s~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~l~~~~ 165 (349)
+.++ .....+ .|...|.+++|+| +++.|++++.|+.|++||+............+...+..+.|+|. ++.++++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 9887 445554 4888999999999 89999999999999999997655433333344478999999872 556777888
Q ss_pred CCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCC-CceEEeeecCCCCCE
Q 018860 166 DMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMP-CTIESASLEPKYGNK 242 (349)
Q Consensus 166 ~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 242 (349)
.+|.|++||+++++.+..+.. ...+.++.|+|++.++++ +.|+.|++||+.++..+..+..+ ..+..++++|.....
T Consensus 206 ~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 889999999999998888874 568999999999987655 56899999999998888777654 467888999864444
Q ss_pred EEEecCCCeEEEEeCCCCcE----------EE---------------------------------EecCCCcceeEEEEc
Q 018860 243 FVAGGEDMWVRFFDFHTGNE----------IA---------------------------------CNKGHHGPVHCVRFS 279 (349)
Q Consensus 243 ~~~~~~d~~i~v~d~~~~~~----------~~---------------------------------~~~~h~~~i~~l~~s 279 (349)
+++++.++.+.+|++..... +. ....|...+.+++|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 365 (814)
T 3mkq_A 286 YIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHS 365 (814)
T ss_dssp EEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEEC
T ss_pred EEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEEC
Confidence 45566677788888754321 11 112345568899999
Q ss_pred cCCCeEEEecCCCCEEEecCCC
Q 018860 280 PGGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 280 p~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
|++++|++++ |+.+.+|++..
T Consensus 366 pdg~~la~~~-~~~~~i~~~~~ 386 (814)
T 3mkq_A 366 PNGRFVTVVG-DGEYVIYTALA 386 (814)
T ss_dssp TTSSEEEEEE-TTEEEEEETTT
T ss_pred CCCCEEEEec-CCEEEEEECcc
Confidence 9999998888 88999998643
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.4e-34 Score=261.22 Aligned_cols=265 Identities=16% Similarity=0.256 Sum_probs=216.9
Q ss_pred cccccceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCC
Q 018860 4 KKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADF 83 (349)
Q Consensus 4 ~~~~~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 83 (349)
|++...+.+.+|.+.|++|+|+| +|++|++|+.|++|++|+..+++.++.+.+|...+.+++++ +..|++|+.|+
T Consensus 135 g~~~~~~~~~~~~~~V~sv~fsp---dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~ 209 (420)
T 4gga_A 135 GDILQLLQMEQPGEYISSVAWIK---EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSG 209 (420)
T ss_dssp CCEEEEEECCSTTCCEEEEEECT---TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTS
T ss_pred CCEEEEEEecCCCCcEEEEEECC---CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCC
Confidence 34444456678999999999997 89999999999999999999999999999999999888774 66899999999
Q ss_pred eEEEEECCCCC-EEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCC---CCceeccCCCCeEEEEEecCCC
Q 018860 84 SAKVWDALTGD-VLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA---PPREVDRSPGSVRTVAWLHSDQ 158 (349)
Q Consensus 84 ~i~vWd~~~~~-~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~---~~~~~~~~~~~i~~~~~~~~~~ 158 (349)
.+++||..... .+..+ .|...+..+.++|++.++++++.|+.+++|+...... .......|...|.+++|+|.+.
T Consensus 210 ~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~ 289 (420)
T 4gga_A 210 HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS 289 (420)
T ss_dssp EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCT
T ss_pred ceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcc
Confidence 99999987654 34444 4888999999999999999999999999999876543 2334567888999999999888
Q ss_pred eEEEE--eeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEE-e--cCCeEEEEecCCceeeEEEc-CCCceEE
Q 018860 159 TILST--CTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITT-A--DGSTVKFWDANHFGLVKSYN-MPCTIES 232 (349)
Q Consensus 159 ~~l~~--~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~--~d~~i~iwd~~~~~~~~~~~-~~~~~~~ 232 (349)
.++++ |+.|++|++||++++++...+..+..+.++.+++++..+++ + .|+.|++||+.+++++..+. +...+..
T Consensus 290 ~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~ 369 (420)
T 4gga_A 290 NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 369 (420)
T ss_dssp TEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred cEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 87765 45789999999999999999988888999999999877644 3 48999999999999888876 4567889
Q ss_pred eeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCccee
Q 018860 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVH 274 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~ 274 (349)
++|+|+ +++|++|+.|++|++||+.........+.+...+.
T Consensus 370 l~~spd-g~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 370 LTMSPD-GATVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp EEECTT-SSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred EEEcCC-CCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 999984 88999999999999999987665544444444333
No 82
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=261.47 Aligned_cols=278 Identities=12% Similarity=0.061 Sum_probs=224.1
Q ss_pred CCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC---eEEEeecc--------------------------------
Q 018860 16 SRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD---WIGTFEGH-------------------------------- 60 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~---~~~~~~~h-------------------------------- 60 (349)
..|+.+++|+| +|++|+++ .++.|++|+..+++ .+..+..|
T Consensus 4 ~~p~~~v~~s~---dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTSR---DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEECS---SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cccEEEEEecC---CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 45789999997 88866655 68899999999998 66666643
Q ss_pred ----------------------cCCeEEEEECCCCCee-EEeeCCCeEEEEECC--CCCEEEEe---ccCCeEEEEEEcC
Q 018860 61 ----------------------KGAVWSCCLDTNALRA-ASASADFSAKVWDAL--TGDVLHSF---EHKHIVRACSFSE 112 (349)
Q Consensus 61 ----------------------~~~v~~~~~~~~~~~l-~s~s~D~~i~vWd~~--~~~~~~~~---~~~~~v~~~~~s~ 112 (349)
...|++++|+|++++| ++++.|+.|+|||+. +++.+..+ .|...|.+++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 3379999999999996 899999999999998 88877776 4678899999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCCCC---CceeccCCCCeEEEEEecC--CCeEEEEeeCCCeEEEEECCCCceEEeec--
Q 018860 113 DTHLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHS--DQTILSTCTDMGGVRLWDVRSGEIVQTLE-- 185 (349)
Q Consensus 113 ~~~~l~s~~~d~~i~lwd~~~~~~~---~~~~~~~~~~i~~~~~~~~--~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-- 185 (349)
++++|++|+.|+.+++|++...... ...+.+|...|.+++|+|. .+.+|++++.|++|++||+++++.+..+.
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 9999999999999999998765432 2256678899999999986 25677788888999999999998877643
Q ss_pred CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCC--------------------------CceEEeeecCC
Q 018860 186 TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMP--------------------------CTIESASLEPK 238 (349)
Q Consensus 186 ~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 238 (349)
+...+.+++|+ ++.+|++ +.|+.|++||+++++++..+... ..+..+.+.|
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~- 317 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK- 317 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS-
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC-
Confidence 55689999999 8887654 56999999999998887776531 2456778887
Q ss_pred CCCEEEEec-CCCeEEEEeC--CCC---cEEEEecCCCcceeEEEEccCCCeEEEecC------CCCEEEecCC
Q 018860 239 YGNKFVAGG-EDMWVRFFDF--HTG---NEIACNKGHHGPVHCVRFSPGGESYASGSE------DGTIRIWQTG 300 (349)
Q Consensus 239 ~~~~~~~~~-~d~~i~v~d~--~~~---~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~------Dg~v~vW~~~ 300 (349)
+++++++++ .|+.|++|++ .++ +.+..+..| +.|.+++|+|++.+++.++. +..|++|.+.
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 477888887 8999999999 565 566777788 88999999996544444443 5668999764
No 83
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2e-34 Score=265.49 Aligned_cols=261 Identities=20% Similarity=0.294 Sum_probs=208.5
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC----------CCeEEEeecccCCeEEEEECCCCC-eeEEe
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET----------GDWIGTFEGHKGAVWSCCLDTNAL-RAASA 79 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 79 (349)
...+|.++|++++|+|. ++.+|++++.||.|++|+..+ ...+..+.+|...|.+++|++++. +|++|
T Consensus 123 ~~~~h~~~v~~l~~~p~--~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQ--NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEESSCCSEEEEETT--EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEcCCCcEEEEEECCC--CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 34689999999999971 367999999999999999876 567889999999999999999988 99999
Q ss_pred eCCCeEEEEECCCCCE-------EEEe-ccCCeEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCC--CCCceeccCCCCe
Q 018860 80 SADFSAKVWDALTGDV-------LHSF-EHKHIVRACSFSE-DTHLLLTGGMEKILRIFDLNRPD--APPREVDRSPGSV 148 (349)
Q Consensus 80 s~D~~i~vWd~~~~~~-------~~~~-~~~~~v~~~~~s~-~~~~l~s~~~d~~i~lwd~~~~~--~~~~~~~~~~~~i 148 (349)
+.||.|++|++..+.. ...+ .|...|.+++|+| ++.+|++++.|+.|++||++... .....+..|...+
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999987422 2233 5888999999999 78899999999999999998653 3445566888999
Q ss_pred EEEEEecCCCeEEEEeeCCCeEEEEECCC-CceEEeec-CCCCeeEEEEcCCCc-E-EEEecCCeEEEEecCCceeeEEE
Q 018860 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRS-GEIVQTLE-TKSPVTSAEVSQDGR-Y-ITTADGSTVKFWDANHFGLVKSY 224 (349)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~-~~~~v~~~~~~~~~~-~-l~~~~d~~i~iwd~~~~~~~~~~ 224 (349)
.+++|+|.+..++++++.||.|++||+++ +..+..+. +...+.++.|+|++. + ++++.|+.|++||++........
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 99999998888888999999999999998 45566665 456788999999874 3 34456888888887653211000
Q ss_pred cCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCC-eEEEecCCCCEEEecCCC
Q 018860 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE-SYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~-~l~sgs~Dg~v~vW~~~~ 301 (349)
. .. .+ ...+.+..+.+|...|.+++|+|+++ +|++++.||.|++|++..
T Consensus 361 ~----------~~----------~~--------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 361 E----------DA----------ED--------GPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp H----------HH----------HH--------CCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred c----------cc----------cc--------CCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 0 00 00 01245566778999999999999999 899999999999999854
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.5e-34 Score=254.31 Aligned_cols=249 Identities=20% Similarity=0.302 Sum_probs=206.5
Q ss_pred EEEeecccCCeEEEEECCCCCee-EEeeC---CCeEEEEECCCCCEEE--EeccCCeEEEEEEcCC---CCEEEEEeCCC
Q 018860 54 IGTFEGHKGAVWSCCLDTNALRA-ASASA---DFSAKVWDALTGDVLH--SFEHKHIVRACSFSED---THLLLTGGMEK 124 (349)
Q Consensus 54 ~~~~~~h~~~v~~~~~~~~~~~l-~s~s~---D~~i~vWd~~~~~~~~--~~~~~~~v~~~~~s~~---~~~l~s~~~d~ 124 (349)
...+++|...|.+++|+|++..+ ++++. |+.|++||+.+++... .+.|...|.+++|+|+ +++|++|+.|+
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 34568899999999999998655 45665 9999999999887644 3468899999999998 69999999999
Q ss_pred eEEEEECCCCCCCCceeccCCCCeEEEEEec-----CCCeEEEEeeCCCeEEEEECCCCc-eEEeecC-----CCCeeEE
Q 018860 125 ILRIFDLNRPDAPPREVDRSPGSVRTVAWLH-----SDQTILSTCTDMGGVRLWDVRSGE-IVQTLET-----KSPVTSA 193 (349)
Q Consensus 125 ~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~-----~~~v~~~ 193 (349)
.|++||+.........+..|...+.++.|.+ +++.++++++.||.|++||+++++ .+..+.. ...+.++
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 9999999876646677888999999998763 456677788889999999999876 5666543 2367888
Q ss_pred E----EcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCC--CCCEEEEecCCCeEEEEeCCCCcEEEEe
Q 018860 194 E----VSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK--YGNKFVAGGEDMWVRFFDFHTGNEIACN 266 (349)
Q Consensus 194 ~----~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~v~d~~~~~~~~~~ 266 (349)
. ++|++.++++ +.|+.|++||+++........+...+..++|+|. ++..+++++.|+.|++||+++++....+
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 7 6788888765 5689999999999988877778888999999984 5889999999999999999876654333
Q ss_pred -----cCCCcceeEEEEccCCC-eEEEecCCCCEEEecCCCC
Q 018860 267 -----KGHHGPVHCVRFSPGGE-SYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 267 -----~~h~~~i~~l~~sp~~~-~l~sgs~Dg~v~vW~~~~~ 302 (349)
.+|...|++++|+|+++ +|++|+.||.|++|++...
T Consensus 251 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 48999999999999998 8999999999999998643
No 85
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.2e-33 Score=251.99 Aligned_cols=277 Identities=11% Similarity=0.127 Sum_probs=208.7
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCee-EEeeCCCeEEEEE
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRA-ASASADFSAKVWD 89 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~vWd 89 (349)
.+.+|.++|++++|+| ||++|++|+.|+ +++|+..+++.+..... ..+..+++.+++..+ ++++.|++|++||
T Consensus 14 ~~~~h~~~V~~v~fs~---dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQ---DQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp -----CCCCCEEEECT---TSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred ccccCCCceEEEEECC---CCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 3478999999999997 899999998775 78999887665544432 357778888888777 5788899999999
Q ss_pred CCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE-eeCCC
Q 018860 90 ALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST-CTDMG 168 (349)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~-~~~dg 168 (349)
..+++++..+.+...|.+++|+++. ++++ .|+.|++||+.........+.. ....+++.+ ..++++ ++.+|
T Consensus 88 ~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g 159 (355)
T 3vu4_A 88 DVKKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLG 159 (355)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTT
T ss_pred CCCCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCc
Confidence 9999999999999999999999864 3333 4789999999765222222322 233444554 444444 67889
Q ss_pred eEEEEECCCCc----------------eEEeec-CCCCeeEEEEcCCCcEEEE-ecCCe-EEEEecCCceeeEEEc---C
Q 018860 169 GVRLWDVRSGE----------------IVQTLE-TKSPVTSAEVSQDGRYITT-ADGST-VKFWDANHFGLVKSYN---M 226 (349)
Q Consensus 169 ~v~vwd~~~~~----------------~~~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~-i~iwd~~~~~~~~~~~---~ 226 (349)
.|++||+++++ .+..+. +..+|.+++|+|++++|++ +.|++ |++||+++++++..+. +
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 99999999865 144454 4568999999999988765 56898 9999999999988886 6
Q ss_pred CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEE--EEe---------------------cCCCcceeEEEEccCCC
Q 018860 227 PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEI--ACN---------------------KGHHGPVHCVRFSPGGE 283 (349)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~--~~~---------------------~~h~~~i~~l~~sp~~~ 283 (349)
...+..++|+|. +++|++++.|++|++||+..+... ..+ ..+..+...++|+|+++
T Consensus 240 ~~~v~~~~~s~~-~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~ 318 (355)
T 3vu4_A 240 RADVVDMKWSTD-GSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS 318 (355)
T ss_dssp CSCEEEEEECTT-SCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE
T ss_pred CCcEEEEEECCC-CCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC
Confidence 677899999984 899999999999999999765321 111 11223347799999999
Q ss_pred eEEEecCCCCEEEecCCCC
Q 018860 284 SYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 284 ~l~sgs~Dg~v~vW~~~~~ 302 (349)
+|++++.||.+++|++...
T Consensus 319 ~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 319 LVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp EEEEETTTTEEEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEEEcC
Confidence 9999999999999987543
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-35 Score=287.57 Aligned_cols=252 Identities=19% Similarity=0.288 Sum_probs=196.6
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCC--CCCeEEEeecccCCeEEEEECCC--CCeeEEeeCCCeE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLDTN--ALRAASASADFSA 85 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~--~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i 85 (349)
.++.||.++|++++|+| +|++|++|+.||+|++|+.. ++..+.++.+|..+|++++|+++ +.+|+||+.||.|
T Consensus 3 ~~l~gH~~~V~~l~~s~---dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCS---SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECC---CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 46789999999999997 88999999999999999987 45678899999999999999988 9999999999999
Q ss_pred EEEECCCCC--EEEEe-ccCCeEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCCC-CCceeccCCCCeEEEEEecC---
Q 018860 86 KVWDALTGD--VLHSF-EHKHIVRACSFSED--THLLLTGGMEKILRIFDLNRPDA-PPREVDRSPGSVRTVAWLHS--- 156 (349)
Q Consensus 86 ~vWd~~~~~--~~~~~-~~~~~v~~~~~s~~--~~~l~s~~~d~~i~lwd~~~~~~-~~~~~~~~~~~i~~~~~~~~--- 156 (349)
++||+.+++ .+..+ .|...|.+++|+|+ ++++++|+.|+.|++||+..... ....+..|...+.++.|.|.
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 999999886 44444 48889999999999 99999999999999999986533 33456778899999999985
Q ss_pred ---------CCeEEEEeeCCCeEEEEECCCCc----eEEeec-CCCCeeEEEEcCC---CcEEEE-ecCCeEEEEecCCc
Q 018860 157 ---------DQTILSTCTDMGGVRLWDVRSGE----IVQTLE-TKSPVTSAEVSQD---GRYITT-ADGSTVKFWDANHF 218 (349)
Q Consensus 157 ---------~~~~l~~~~~dg~v~vwd~~~~~----~~~~~~-~~~~v~~~~~~~~---~~~l~~-~~d~~i~iwd~~~~ 218 (349)
++.++++++.||.|++||++++. +...+. +..++.+++|+|+ +.++++ +.|+.|++||+++.
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 46677788888999999998763 333443 3456777777776 554433 34566666665432
Q ss_pred eeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 219 GLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
.... ...+.....|...|++++|+|++++|++|+.||.|++|+
T Consensus 240 ~~~~-------------------------------------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 240 QGPW-------------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp SSCC-------------------------------------BCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred CCcc-------------------------------------eeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 1100 001122345888999999999999999999999999999
Q ss_pred CCC
Q 018860 299 TGP 301 (349)
Q Consensus 299 ~~~ 301 (349)
+..
T Consensus 283 ~~~ 285 (753)
T 3jro_A 283 ENL 285 (753)
T ss_dssp CCS
T ss_pred cCC
Confidence 874
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.7e-34 Score=256.86 Aligned_cols=243 Identities=17% Similarity=0.182 Sum_probs=207.0
Q ss_pred EEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCC----EEEEeccCCeEEEEEEcCCCC-EEEEEeCCCeEEEE
Q 018860 55 GTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGD----VLHSFEHKHIVRACSFSEDTH-LLLTGGMEKILRIF 129 (349)
Q Consensus 55 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~----~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d~~i~lw 129 (349)
....+|.+.|.+++|+|++.+|++++.|+.|++|++.++. ......|...|.+++|+|+++ +|++|+.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3446899999999999999999999999999999998887 666667999999999999999 99999999999999
Q ss_pred EC-CCCCCCCceecc--CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCC---------CceEEeecCCCCeeEEEEcC
Q 018860 130 DL-NRPDAPPREVDR--SPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS---------GEIVQTLETKSPVTSAEVSQ 197 (349)
Q Consensus 130 d~-~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~---------~~~~~~~~~~~~v~~~~~~~ 197 (349)
|+ .... ...+.. |...|.++.|++ +.++++++.|+.|++||+++ ++++..+.+...+.++.++|
T Consensus 85 d~~~~~~--~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 160 (342)
T 1yfq_A 85 DLIGSPS--FQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNS 160 (342)
T ss_dssp CSSSSSS--EEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECS
T ss_pred EeccCCc--eEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecC
Confidence 98 6543 255667 889999999998 55666778889999999988 77777777778899999999
Q ss_pred CCcEEEEecCCeEEEEecCC-ceee---EEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCC------cEEEEec
Q 018860 198 DGRYITTADGSTVKFWDANH-FGLV---KSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTG------NEIACNK 267 (349)
Q Consensus 198 ~~~~l~~~~d~~i~iwd~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~------~~~~~~~ 267 (349)
++ +++++.++.|++||+++ .... ....+...+..+++.|.+++++++++.|+.|++|++... +....+.
T Consensus 161 ~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 161 SR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp SE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred Cc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeee
Confidence 88 77778899999999987 4321 233445567888998823789999999999999999876 6667777
Q ss_pred CCCc---------ceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 268 GHHG---------PVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 268 ~h~~---------~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
+|.. +|.+++|+|++++|++|+.||.|++||+...
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 7755 9999999999999999999999999998644
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-33 Score=256.69 Aligned_cols=246 Identities=21% Similarity=0.293 Sum_probs=208.9
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECC-C
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDAL-T 92 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~-~ 92 (349)
+|.++|.+++|+| ++++|++|+.||.+++|+..+++.+..+.+|...|.+++| ++.+|++++.|+.|++||+. .
T Consensus 132 ~~~~~v~~v~~s~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~ 206 (401)
T 4aez_A 132 DESTYVASVKWSH---DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIA 206 (401)
T ss_dssp CTTCCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS
T ss_pred CCCCCEEEEEECC---CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccC
Confidence 4899999999997 8999999999999999999999999999999999999999 45699999999999999998 4
Q ss_pred CCEEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEee--CCCe
Q 018860 93 GDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT--DMGG 169 (349)
Q Consensus 93 ~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~--~dg~ 169 (349)
+..+..+ .|...|.+++|+|++++|++|+.|+.|++||+.... ....+..|...+.+++|+|.+..++++++ .|+.
T Consensus 207 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~ 285 (401)
T 4aez_A 207 NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI-PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ 285 (401)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS-EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE
T ss_pred cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC-ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE
Confidence 4555555 488899999999999999999999999999997633 33455678889999999998888888876 6899
Q ss_pred EEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEE--e-cCCeEEEEecCCceeeEEE---cCCCceEEeeecCCCCCEE
Q 018860 170 VRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITT--A-DGSTVKFWDANHFGLVKSY---NMPCTIESASLEPKYGNKF 243 (349)
Q Consensus 170 v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~-~d~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 243 (349)
|++||+++++.+..+.+...+.++.|+|++.++++ + .|+.|++||+.+....... .+...+..++|+| ++.++
T Consensus 286 i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l 364 (401)
T 4aez_A 286 IHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP-DGRIL 364 (401)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECT-TSSEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECC-CCCEE
Confidence 99999999999999988889999999999988765 3 5899999999886555443 3445678889998 48899
Q ss_pred EEecCCCeEEEEeCCCCcEEEEe
Q 018860 244 VAGGEDMWVRFFDFHTGNEIACN 266 (349)
Q Consensus 244 ~~~~~d~~i~v~d~~~~~~~~~~ 266 (349)
++++.|+.|++|++.+++.+...
T Consensus 365 ~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 365 STAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEECTTSEEEEEECCC-------
T ss_pred EEEeCCCcEEEEECCCCcccccc
Confidence 99999999999999998876543
No 89
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-35 Score=270.99 Aligned_cols=260 Identities=12% Similarity=0.077 Sum_probs=207.8
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCC
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~ 93 (349)
+=+..|.+|+||| ||+++||+|.|++++ +...+ +.+++|...|++|+|+|+| .++.+++|+....
T Consensus 13 ~~~~~v~sv~~Sp---DG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 13 EFEDWKNNLTWAR---DGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQN 77 (588)
T ss_dssp CCSSSSCCEEECT---TSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS
T ss_pred HhhccEEEEEECC---CCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCCc
Confidence 3457799999997 999999999999999 65444 4558999999999999998 5777777765432
Q ss_pred CEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCC-----CeEEEEEecCCCeEEEEeeCCC
Q 018860 94 DVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG-----SVRTVAWLHSDQTILSTCTDMG 168 (349)
Q Consensus 94 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~l~~~~~dg 168 (349)
.+..+.|...|.+++|+|+|.+||+++.|+.+++||... ....+. |.. .+.+++|+|+ +.+|++|++||
T Consensus 78 -~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPD-G~~LAsgs~DG 151 (588)
T 2j04_A 78 -GLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPI-ESSIVVGNEDG 151 (588)
T ss_dssp -CSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSS-SSCEEEEETTS
T ss_pred -eEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCC-CCEEEEEcCCC
Confidence 333445678899999999999999999999999999532 122223 333 5999999875 55677888899
Q ss_pred eEEEEECCCCce-------EEeec-----CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCcee---eEEE--cCCCceE
Q 018860 169 GVRLWDVRSGEI-------VQTLE-----TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGL---VKSY--NMPCTIE 231 (349)
Q Consensus 169 ~v~vwd~~~~~~-------~~~~~-----~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~---~~~~--~~~~~~~ 231 (349)
+|++||+.++.. +.++. +...|.+++|+|++ +++++.|++|++||+..... .+.+ .+...+.
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~ 230 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKIT 230 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCC
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEE
Confidence 999999998753 45553 23589999999999 77888899999999987763 2344 2335678
Q ss_pred EeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEE--ccCCCeEEEecCCCCEEEecCC
Q 018860 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRF--SPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~--sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
.++|+ ++.+++++ +++|++||+.+++......+|.+.|+.++| +|++..|+++++||+ ++|..+
T Consensus 231 svaFs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 231 DLKIV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CEEEE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 88887 47888887 699999999988775444489999999999 999999999999999 999875
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.2e-33 Score=248.26 Aligned_cols=246 Identities=24% Similarity=0.364 Sum_probs=211.9
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
..+.||.++|.++.|+| +|++|++++.|+.+++|+............+...+..+.+++++.+|++++.|+.+++||
T Consensus 80 ~~l~~h~~~V~~~~~s~---dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d 156 (340)
T 4aow_A 80 RALRGHSHFVSDVVISS---DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 156 (340)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEeCCCCCEEEEEECC---CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEE
Confidence 35689999999999997 899999999999999999998888888899999999999999999999999999999999
Q ss_pred CCCCCEEEEe--ccCCeEEEEEEcCCC--CEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEee
Q 018860 90 ALTGDVLHSF--EHKHIVRACSFSEDT--HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT 165 (349)
Q Consensus 90 ~~~~~~~~~~--~~~~~v~~~~~s~~~--~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 165 (349)
.......... .|...+..++|++++ .++++++.|+.|++||+.... ....+.+|.+.|.+++|+|++ .+|++++
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~s~~~-~~l~s~s 234 (340)
T 4aow_A 157 TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDG-SLCASGG 234 (340)
T ss_dssp TTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTS-SEEEEEE
T ss_pred eCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-eeeEecCCCCcEEEEEECCCC-CEEEEEe
Confidence 8766543332 377889999998864 578899999999999997643 344567788999999998754 5667788
Q ss_pred CCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEc----------CCCceEEeee
Q 018860 166 DMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYN----------MPCTIESASL 235 (349)
Q Consensus 166 ~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~----------~~~~~~~~~~ 235 (349)
.||.|++||+++++.+..+..+..+..+.++|++.+++++.|+.|++||+++...+..+. +...+.+++|
T Consensus 235 ~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 314 (340)
T 4aow_A 235 KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAW 314 (340)
T ss_dssp TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEE
T ss_pred CCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEE
Confidence 889999999999999999998889999999999999999999999999999887766543 3345788999
Q ss_pred cCCCCCEEEEecCCCeEEEEeCCCCc
Q 018860 236 EPKYGNKFVAGGEDMWVRFFDFHTGN 261 (349)
Q Consensus 236 ~~~~~~~~~~~~~d~~i~v~d~~~~~ 261 (349)
+|+ +++|++|+.|+.|++||+.+|+
T Consensus 315 s~d-g~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 315 SAD-GQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CTT-SSEEEEEETTSCEEEEEEEC--
T ss_pred CCC-CCEEEEEeCCCEEEEEeCCCcC
Confidence 984 8899999999999999998875
No 91
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.5e-32 Score=249.16 Aligned_cols=266 Identities=13% Similarity=0.132 Sum_probs=226.3
Q ss_pred cEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCee-EEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEE
Q 018860 32 FFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRA-ASASADFSAKVWDALTGDVLHSFEHKHIVRACSF 110 (349)
Q Consensus 32 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~ 110 (349)
..+++++.|+.|++|+..+++.+..+.+|.. +.+++|++++.+| ++++.|+.|++||+.+++.+..+.+...+.+++|
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~ 81 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV 81 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEE
Confidence 4688899999999999999999999998865 8999999999876 6777999999999999999999887779999999
Q ss_pred cCCCCEEEE-EeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCCCC
Q 018860 111 SEDTHLLLT-GGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSP 189 (349)
Q Consensus 111 s~~~~~l~s-~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~ 189 (349)
+|++++|+. ++.++.|++||+.+.+. ...+ .+...+.+++|+|++..++++++.++.|++||+++++.+..+..+..
T Consensus 82 spdg~~l~~~~~~~~~v~v~d~~~~~~-~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 159 (391)
T 1l0q_A 82 SPDGKQVYVTNMASSTLSVIDTTSNTV-AGTV-KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS 159 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEE-EEEE-ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS
T ss_pred CCCCCEEEEEECCCCEEEEEECCCCeE-EEEE-eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC
Confidence 999998754 55779999999976432 2222 24457899999988887878888889999999999999888887778
Q ss_pred eeEEEEcCCCcEE-EE-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEec---CCCeEEEEeCCCCcEEE
Q 018860 190 VTSAEVSQDGRYI-TT-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGG---EDMWVRFFDFHTGNEIA 264 (349)
Q Consensus 190 v~~~~~~~~~~~l-~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~i~v~d~~~~~~~~ 264 (349)
+..+.++|+++.+ ++ +.++.|++||+++......+.....+..++++|. ++++++++ .++.|++||+.+++.+.
T Consensus 160 ~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~v~~~d~~~~~~~~ 238 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPE-GTKAYVTNVDKYFNTVSMIDTGTNKITA 238 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTT-SSEEEEEEECSSCCEEEEEETTTTEEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCC-CCEEEEEecCcCCCcEEEEECCCCeEEE
Confidence 8999999999876 34 4579999999999988888877777888899885 67777766 78999999999999888
Q ss_pred EecCCCcceeEEEEccCCCeE-EEecCCCCEEEecCCCC
Q 018860 265 CNKGHHGPVHCVRFSPGGESY-ASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 265 ~~~~h~~~i~~l~~sp~~~~l-~sgs~Dg~v~vW~~~~~ 302 (349)
.+..|. .+.+++|+|++++| ++++.|+.|++||+...
T Consensus 239 ~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 239 RIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 887765 47899999999977 68899999999998643
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.5e-34 Score=258.40 Aligned_cols=246 Identities=20% Similarity=0.290 Sum_probs=208.1
Q ss_pred eEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCC------EEEE-eccCCeEEEEEEcCC----C---CEEE
Q 018860 53 WIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGD------VLHS-FEHKHIVRACSFSED----T---HLLL 118 (349)
Q Consensus 53 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~------~~~~-~~~~~~v~~~~~s~~----~---~~l~ 118 (349)
....+++|.+.|++++|++ .+|++|+.|+.|++|++.+++ .+.. ..|...|.+++|+|+ + ++|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 3567789999999999998 799999999999999999887 4444 458899999999999 9 9999
Q ss_pred EEeCCCeEEEEECCCCCCC----CceeccC-----CCCeEEEEEe----cCCCeEEEEeeCCCeEEEEECCC------Cc
Q 018860 119 TGGMEKILRIFDLNRPDAP----PREVDRS-----PGSVRTVAWL----HSDQTILSTCTDMGGVRLWDVRS------GE 179 (349)
Q Consensus 119 s~~~d~~i~lwd~~~~~~~----~~~~~~~-----~~~i~~~~~~----~~~~~~l~~~~~dg~v~vwd~~~------~~ 179 (349)
+++.|+.|++||+...... ...+..| ...+.++.|+ |.+..++++++.+|.|++||+++ ++
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 9999999999998765431 3445566 4889999999 76655377788889999999988 65
Q ss_pred eEE-----eec--------CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcC-------CCceEEeeecCC
Q 018860 180 IVQ-----TLE--------TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNM-------PCTIESASLEPK 238 (349)
Q Consensus 180 ~~~-----~~~--------~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~ 238 (349)
.+. .+. +...+.++.|+|++ ++++ +.|+.|++||+++.+++..+.. ...+..++|+|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 554 553 35679999999999 6655 5689999999999988888775 667889999985
Q ss_pred CCCEEEEecCC---CeEEEEeCCCCcEEEEecC-------------CCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 239 YGNKFVAGGED---MWVRFFDFHTGNEIACNKG-------------HHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 239 ~~~~~~~~~~d---~~i~v~d~~~~~~~~~~~~-------------h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
+++|++++.| +.|++||+.+++.+..+.+ |..+|.+++|+|++++|++++.||.|++||+...
T Consensus 245 -~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 245 -GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp -TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred -CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 8899999999 9999999999999999888 9999999999999999999999999999998654
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.3e-34 Score=263.57 Aligned_cols=245 Identities=15% Similarity=0.174 Sum_probs=178.5
Q ss_pred CccEEEEEecCCCeEEEeCCCCCe-----EEEeecccCCeEEEEECC--------CCCeeEEeeCCCeEEEEECCCCCE-
Q 018860 30 DGFFLISASKDSSPMLRNGETGDW-----IGTFEGHKGAVWSCCLDT--------NALRAASASADFSAKVWDALTGDV- 95 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~-----~~~~~~h~~~v~~~~~~~--------~~~~l~s~s~D~~i~vWd~~~~~~- 95 (349)
++.+|++|+.|+++++|+..+++. +..++||.+.|++++|+| |+++|||||.|++|||||+.++..
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 677999999999999999887754 345689999999999987 889999999999999999977655
Q ss_pred EEEeccCCeEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCCCCc------------------------eeccCCCCeEE
Q 018860 96 LHSFEHKHIVRACSFSEDT-HLLLTGGMEKILRIFDLNRPDAPPR------------------------EVDRSPGSVRT 150 (349)
Q Consensus 96 ~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~i~lwd~~~~~~~~~------------------------~~~~~~~~i~~ 150 (349)
...+.|...|.+++|+|++ ++|++|+.|++|++||+.+...... ...+|...+.+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~ 259 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN 259 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence 4556788999999999987 5899999999999999976543211 12346667888
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCC-CCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcCCCc
Q 018860 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCT 229 (349)
Q Consensus 151 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~ 229 (349)
+.|.++++..+++++.|+++++||++.++....+..+ ..+..+.+.|+.+.+.. ...
T Consensus 260 v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------------~~~ 317 (393)
T 4gq1_A 260 VRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL----------------------FPS 317 (393)
T ss_dssp EEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS----------------------SCC
T ss_pred eeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc----------------------cCc
Confidence 9999888888888999999999999988766555432 23444555554332211 111
Q ss_pred eEEeeecCCCCC-EEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEe
Q 018860 230 IESASLEPKYGN-KFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297 (349)
Q Consensus 230 ~~~~~~~~~~~~-~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW 297 (349)
.....+.+..+. ++++|+.|+.|++||+.+++......+|..+|.+++|||+|++||+++.||. .+|
T Consensus 318 ~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv-~lv 385 (393)
T 4gq1_A 318 LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV-LLT 385 (393)
T ss_dssp SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE-EEE
T ss_pred ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEE
Confidence 122334444444 4567788999999999999988888889999999999999999999998885 444
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-33 Score=254.91 Aligned_cols=249 Identities=16% Similarity=0.121 Sum_probs=203.9
Q ss_pred CCCCeEEEeecccCCeEEEEECCCC-CeeEEeeCCCeEEEEECCCCCEEEEec---cCCeEEEEEEcC-CCCEEEEEeCC
Q 018860 49 ETGDWIGTFEGHKGAVWSCCLDTNA-LRAASASADFSAKVWDALTGDVLHSFE---HKHIVRACSFSE-DTHLLLTGGME 123 (349)
Q Consensus 49 ~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vWd~~~~~~~~~~~---~~~~v~~~~~s~-~~~~l~s~~~d 123 (349)
.+......+.+|...|.+++|++++ .+|++|+.|+.|+|||+.+++....+. |...|.+++|+| ++++|++++.|
T Consensus 61 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 61 KSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp TTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred cccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 4556788899999999999999998 899999999999999999888777664 889999999999 78999999999
Q ss_pred CeEEEEECCCCCCCCceec---cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeec-CCCCeeEEEEcCCC
Q 018860 124 KILRIFDLNRPDAPPREVD---RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDG 199 (349)
Q Consensus 124 ~~i~lwd~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 199 (349)
+.|++||+.. .....+. .+...+.+++|+|++. ++++++.|+.|++||++ ++.+..+. +...+.+++|+|++
T Consensus 141 ~~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~ 216 (383)
T 3ei3_B 141 GATTLRDFSG--SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRC 216 (383)
T ss_dssp TEEEEEETTS--CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSC
T ss_pred CEEEEEECCC--CceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCC
Confidence 9999999974 2222333 2347799999997655 56677888999999994 66666665 56689999999999
Q ss_pred c-EE-EEecCCeEEEEecCC----ceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCC---
Q 018860 200 R-YI-TTADGSTVKFWDANH----FGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHH--- 270 (349)
Q Consensus 200 ~-~l-~~~~d~~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~--- 270 (349)
. ++ +++.|+.|++||+++ ..++..+.+...+..++|+|.++++|++++.|+.|++||+.+++.+..+.+|.
T Consensus 217 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 296 (383)
T 3ei3_B 217 DWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQ 296 (383)
T ss_dssp TTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCC
T ss_pred CCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccc
Confidence 7 55 556799999999987 66777777778899999998558999999999999999999887765555442
Q ss_pred --------------cceeEEEEccCCCeEEEecCCCCEEEecCCCCC
Q 018860 271 --------------GPVHCVRFSPGGESYASGSEDGTIRIWQTGPVT 303 (349)
Q Consensus 271 --------------~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~~ 303 (349)
+.+..++|+|++++ +|+.||+|++||+....
T Consensus 297 ~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 297 FQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG 341 (383)
T ss_dssp CTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC
T ss_pred cccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc
Confidence 33445777777776 88999999999986543
No 95
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.5e-32 Score=252.48 Aligned_cols=277 Identities=12% Similarity=0.090 Sum_probs=229.0
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEE-----EeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECC
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIG-----TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDAL 91 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~ 91 (349)
..+.+++|+| ++.++++++.|+.+++|+..+++.+. .+.+|...|.+++|++++.++++++.|+.|++||+.
T Consensus 123 ~~~~~~~~s~---~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 123 FQPKSVRFID---NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp SCBCCCEESS---SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT
T ss_pred CCceEEEEeC---CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC
Confidence 3456899987 77889999999999999999998887 456899999999999999999999999999999999
Q ss_pred CCCEEEEec-cCCeEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEee----
Q 018860 92 TGDVLHSFE-HKHIVRACSFSEDTHLLL-TGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT---- 165 (349)
Q Consensus 92 ~~~~~~~~~-~~~~v~~~~~s~~~~~l~-s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~---- 165 (349)
+++.+..+. |...+.+++|+|+++.++ +++.|+.|++||+.+... ...+ .....+..++|+|.+..+++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 200 TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-IRKT-DKIGLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEEC-CCCSEEEEEEECTTSSEEEEEEEESCT
T ss_pred CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE-EEEe-cCCCCceEEEEcCCCCEEEEEECCCCc
Confidence 998888775 677899999999999885 455899999999875432 1222 23456889999987776666553
Q ss_pred ---CCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEE-EE-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCC
Q 018860 166 ---DMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYI-TT-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYG 240 (349)
Q Consensus 166 ---~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (349)
.+|.|++||+++++.+..+.+...+..+.++|+++.+ ++ +.++.|++||+.+.+.+..+.....+..++++|. +
T Consensus 278 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~d-g 356 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPD-G 356 (433)
T ss_dssp TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTT-S
T ss_pred cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCC-C
Confidence 4689999999999888777666678899999999654 44 4689999999999988888887778889999985 6
Q ss_pred CEEEEecC---------------CCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEec-CCCCEEEecCC
Q 018860 241 NKFVAGGE---------------DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS-EDGTIRIWQTG 300 (349)
Q Consensus 241 ~~~~~~~~---------------d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs-~Dg~v~vW~~~ 300 (349)
+++++++. ||.|++||+.+++.+..+.. ...+.+++|+|++++|++++ .|++|++|++.
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 77776654 57999999999998887776 45789999999999998776 59999999875
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-33 Score=242.30 Aligned_cols=242 Identities=21% Similarity=0.395 Sum_probs=202.4
Q ss_pred CCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEE
Q 018860 51 GDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIF 129 (349)
Q Consensus 51 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lw 129 (349)
.+.++++++|.+.|.+++| +++.+|++++.||.|++||+.+++....+. |...|.+++|+|++++|++++.|+.+++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 4678899999999999999 899999999999999999998887766654 78899999999999999999999999999
Q ss_pred ECCCCC--CCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeec-CCCCeeEEEEcC-CCcEE-EE
Q 018860 130 DLNRPD--APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQ-DGRYI-TT 204 (349)
Q Consensus 130 d~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l-~~ 204 (349)
++.... .....+..|...+.++.|. +.++++++.+|.|++|| .++....+. +..++.++.+.| ++.++ ++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 987543 3345667888999999983 34677888889999999 556665555 456788999887 66665 45
Q ss_pred ecCCeEEEEecCCceeeEEEc--CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCC
Q 018860 205 ADGSTVKFWDANHFGLVKSYN--MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGG 282 (349)
Q Consensus 205 ~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~ 282 (349)
+.|+.|++||.. .....+. +...+..+++.|. +. +++++.|+.|++||+++++.+..+.+|..+|.+++|+|++
T Consensus 162 ~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~-~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 237 (313)
T 3odt_A 162 SADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDD-GH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG 237 (313)
T ss_dssp ETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEET-TE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred ECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCC-Ce-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC
Confidence 679999999944 3444443 4556788888874 33 9999999999999999999999999999999999999999
Q ss_pred CeEEEecCCCCEEEecCCCCC
Q 018860 283 ESYASGSEDGTIRIWQTGPVT 303 (349)
Q Consensus 283 ~~l~sgs~Dg~v~vW~~~~~~ 303 (349)
.|++++.||.|++||+....
T Consensus 238 -~l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 238 -DIVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp -CEEEEETTSEEEEECTTTCC
T ss_pred -CEEEEecCCEEEEEECCCCc
Confidence 68999999999999986543
No 97
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.1e-35 Score=262.81 Aligned_cols=242 Identities=11% Similarity=0.165 Sum_probs=192.9
Q ss_pred EeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCC--CEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 018860 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG--DVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132 (349)
Q Consensus 56 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~--~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~ 132 (349)
.++.|.++|++++|+|++++|++|+.|+.|++||+.++ +.+..+. |...|.+++|+|++++|++++.|+.|++||+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 45557789999999999999999999999999999987 5666654 88899999999999999999999999999997
Q ss_pred CCC--CCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCc---eEEeec--CCCCeeEEEEcCCCcEEEE-
Q 018860 133 RPD--APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE---IVQTLE--TKSPVTSAEVSQDGRYITT- 204 (349)
Q Consensus 133 ~~~--~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~--~~~~v~~~~~~~~~~~l~~- 204 (349)
... .....+..|...+.+++|+|++. ++++++.|+.|++||+++++ ....+. +...+.+++|+|+++++++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 654 12344567889999999988554 55677778999999999876 355555 5678999999999987655
Q ss_pred ecCCeEEEEecC------------------CceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcE----
Q 018860 205 ADGSTVKFWDAN------------------HFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE---- 262 (349)
Q Consensus 205 ~~d~~i~iwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~---- 262 (349)
+.|+.|++||++ ...++..+.+...+..++|+|. +++|++++.|+.|++||+.+++.
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~d~~i~iwd~~~~~~~~~~ 243 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPS-GNALAYAGHDSSVTIAYPSAPEQPPRA 243 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTT-SSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCC-CCEEEEEeCCCcEEEEECCCCCCccee
Confidence 569999999985 2344555555566889999985 78999999999999999999887
Q ss_pred EEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 263 IACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 263 ~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
+..+.+|..+|.+++|+|++++|++|+.|+.+ +|+..
T Consensus 244 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 244 LITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred eEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 77788999999999999999999999877766 55543
No 98
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-34 Score=269.09 Aligned_cols=225 Identities=11% Similarity=0.051 Sum_probs=175.1
Q ss_pred CeeEEeeCCCeEEEEECCCCCEE----EEec-cCCeEEEEEEcCC------CCEEEEEeCCCeEEEEECCCCCCC-----
Q 018860 74 LRAASASADFSAKVWDALTGDVL----HSFE-HKHIVRACSFSED------THLLLTGGMEKILRIFDLNRPDAP----- 137 (349)
Q Consensus 74 ~~l~s~s~D~~i~vWd~~~~~~~----~~~~-~~~~v~~~~~s~~------~~~l~s~~~d~~i~lwd~~~~~~~----- 137 (349)
+.|+|++.|++|+||++.++++. ..+. |...|..++|+|+ +.+|++++.|++|++||+......
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~ 253 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK 253 (524)
T ss_dssp --------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE
T ss_pred hhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccce
Confidence 34555778999999999877642 2343 5678999999996 579999999999999999754321
Q ss_pred -----CceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCc-eEEeec-CCCCeeEE--EEcCCC-cEE-EEec
Q 018860 138 -----PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE-IVQTLE-TKSPVTSA--EVSQDG-RYI-TTAD 206 (349)
Q Consensus 138 -----~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~-~~~~v~~~--~~~~~~-~~l-~~~~ 206 (349)
...+.+|...+.+++|+++ + .|++|+.||+|++||++++. +...+. +..+|.++ .++|++ .+| +++.
T Consensus 254 ~~~~p~~~l~~h~~~v~sv~~s~~-~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~ 331 (524)
T 2j04_B 254 MCEKPSLTLSLADSLITTFDFLSP-T-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV 331 (524)
T ss_dssp CCCSCSEEECCTTTCEEEEEESSS-S-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred eecCceEEEEcCCCCEEEEEecCC-C-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence 2345678889999999864 3 57788889999999998764 334444 45689998 567887 665 5677
Q ss_pred CCeEEEEecCCceeeEEEcC--C-CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCC
Q 018860 207 GSTVKFWDANHFGLVKSYNM--P-CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE 283 (349)
Q Consensus 207 d~~i~iwd~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~ 283 (349)
|++|++||+++.++...+.. . ..+.+++|+|. +..+++++.|++|++||++++..+..+.+|.++|++++|||+++
T Consensus 332 D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~ 410 (524)
T 2j04_B 332 DGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ-IYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP 410 (524)
T ss_dssp TSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT-TTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC
T ss_pred CCeEEEEECCCCCcccccccccccCcccceEeCCC-cCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC
Confidence 99999999998765544321 1 23567889985 77899999999999999999988888889999999999999999
Q ss_pred eEEEecCCCCEEEecCCC
Q 018860 284 SYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 284 ~l~sgs~Dg~v~vW~~~~ 301 (349)
+|+|||.||+|++|++..
T Consensus 411 ~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 411 MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp BCEEEETTTEEECCBSCS
T ss_pred eEEEEECCCEEEEEechH
Confidence 999999999999999754
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-34 Score=253.40 Aligned_cols=258 Identities=10% Similarity=0.074 Sum_probs=202.5
Q ss_pred CCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECC---------CCCEEEEe
Q 018860 29 PDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDAL---------TGDVLHSF 99 (349)
Q Consensus 29 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~---------~~~~~~~~ 99 (349)
+++.+|++|+.|++|++|+..+++.+..+. ...|.++.++|+ ++|++.|++|++|+.. +++.+..+
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 368899999999999999999999888886 566888888887 9999999999999665 45544444
Q ss_pred --ccCCeEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCCCCCcee-ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEE
Q 018860 100 --EHKHIVRACSFSE--DTHLLLTGGMEKILRIFDLNRPDAPPREV-DRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174 (349)
Q Consensus 100 --~~~~~v~~~~~s~--~~~~l~s~~~d~~i~lwd~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd 174 (349)
.|...|.+++|+| +++++++++.|++|++||+..... .... ..+...+.+++|+| ++.++++|+.||.|++||
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ-YIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVYN 198 (343)
T ss_dssp ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE-EEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEEE
T ss_pred ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE-EEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEEEEE
Confidence 3557899999999 999999999999999999976543 2222 34455799999987 456777888889999999
Q ss_pred CCCCceE-EeecC--CCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcC---C-Cce--EEeeecCCCCCEEEE
Q 018860 175 VRSGEIV-QTLET--KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM---P-CTI--ESASLEPKYGNKFVA 245 (349)
Q Consensus 175 ~~~~~~~-~~~~~--~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~---~-~~~--~~~~~~~~~~~~~~~ 245 (349)
+++++.+ ..+.. ..++.+++|+|++.+|+++.++.|++||+++...+..+.. + ..+ ..++|+|. ++++++
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~ 277 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDS-GKNMIA 277 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTT-SSEEEE
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCC-CCEEEE
Confidence 9999877 66654 6789999999999988776677999999998766543321 1 111 35888885 889998
Q ss_pred ecC-CCeEEEEeCCCCcEEEEecCCCcceeEEEEcc---CCCeEEEecCCCCEEEec
Q 018860 246 GGE-DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSP---GGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 246 ~~~-d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp---~~~~l~sgs~Dg~v~vW~ 298 (349)
++. |+.|++|++......... .++..++|+| +...|++++.||.+.++-
T Consensus 278 ~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 278 YSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp EETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred ecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEE
Confidence 887 999999998665432222 5677889998 888999999999999884
No 100
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2e-33 Score=251.83 Aligned_cols=245 Identities=13% Similarity=0.232 Sum_probs=202.7
Q ss_pred EeecccCCeEEEEECCC----CCeeEEeeCCCeEEEEECCCCCEEEEec------cCCeEEEEEEcCC----CCEEEEEe
Q 018860 56 TFEGHKGAVWSCCLDTN----ALRAASASADFSAKVWDALTGDVLHSFE------HKHIVRACSFSED----THLLLTGG 121 (349)
Q Consensus 56 ~~~~h~~~v~~~~~~~~----~~~l~s~s~D~~i~vWd~~~~~~~~~~~------~~~~v~~~~~s~~----~~~l~s~~ 121 (349)
..++|..+|++++|+|+ ...+++++.++.|++||+.+++.+..+. |...|.+++|+|+ +.+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 4456777777799999999887665553 5578999999998 67999999
Q ss_pred CCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEee----cCCCCeeEEEEcC
Q 018860 122 MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL----ETKSPVTSAEVSQ 197 (349)
Q Consensus 122 ~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~----~~~~~v~~~~~~~ 197 (349)
.|+.|++||+.+.+ ....+..|...|.++.|+|.++.++++++.||.|++||+++++.+..+ .+...+.++.|+|
T Consensus 93 ~dg~i~v~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 93 SRGIIRIINPITMQ-CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp TTCEEEEECTTTCC-EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CCCEEEEEEchhce-EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 99999999997643 345567789999999999867778888888999999999999988887 3566899999999
Q ss_pred CCcEEEE-ecCCeEEEEecCCceeeEEEc-----------------------------CCCceEEeeecCCCCCEEEEec
Q 018860 198 DGRYITT-ADGSTVKFWDANHFGLVKSYN-----------------------------MPCTIESASLEPKYGNKFVAGG 247 (349)
Q Consensus 198 ~~~~l~~-~~d~~i~iwd~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~ 247 (349)
++.++++ +.|+.|++||+++.+....+. +...+.++.|. ++++++++
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~ 248 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKS 248 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEEC
T ss_pred CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEe
Confidence 9987655 569999999998765443222 44456677776 57999999
Q ss_pred CCCeEEEEeCCCCcE--------------EEEecCCCcceeEEEEccC--CCeEEEecCCCCEEEecCCCCCC
Q 018860 248 EDMWVRFFDFHTGNE--------------IACNKGHHGPVHCVRFSPG--GESYASGSEDGTIRIWQTGPVTN 304 (349)
Q Consensus 248 ~d~~i~v~d~~~~~~--------------~~~~~~h~~~i~~l~~sp~--~~~l~sgs~Dg~v~vW~~~~~~~ 304 (349)
.|+.|++||+.+++. +..+.+|...|++++|+|+ +++|++|+.||.|++||+.....
T Consensus 249 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 249 CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 999999999987644 6778899999999999999 99999999999999999976543
No 101
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=251.40 Aligned_cols=256 Identities=16% Similarity=0.189 Sum_probs=205.8
Q ss_pred CeEEEeCCCCCeEEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEEEEC----CCCC------EEEEecc---------
Q 018860 42 SPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKVWDA----LTGD------VLHSFEH--------- 101 (349)
Q Consensus 42 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vWd~----~~~~------~~~~~~~--------- 101 (349)
.+.+|+............|...|.+++|+|++. +|++|+.|+.|++|++ .+++ ....+.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (425)
T 1r5m_A 26 IDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSG 105 (425)
T ss_dssp --------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC----
T ss_pred ccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccccccc
Confidence 345677655444444455679999999999999 9999999999999999 8887 4444443
Q ss_pred --CCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCc
Q 018860 102 --KHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE 179 (349)
Q Consensus 102 --~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 179 (349)
...|++++|+|++++|++++.|+.|++||.. ......+..|...+.++.|+|.+. ++++++.+|.|++||+++++
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKT--GALLNVLNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVISGT 182 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETT--SCEEEEECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTTE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC--CCeeeeccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCCCc
Confidence 5689999999999999999999999999942 333456677889999999987655 55567778999999999999
Q ss_pred eEEeecCCC-C---------------eeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEc-CCCceEEeeecCCCCCE
Q 018860 180 IVQTLETKS-P---------------VTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNK 242 (349)
Q Consensus 180 ~~~~~~~~~-~---------------v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (349)
.+..+.... . +.++.+++++.+++++.++.|++||+++...+..+. +...+..+++.|. +++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~ 261 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT-NKL 261 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT-TTE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC-CCE
Confidence 888776543 2 888999999988888889999999999887776664 3456788999985 789
Q ss_pred EEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 243 FVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 243 ~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
+++++.|+.|++||+.+++.+..+.+|...|.+++|+|++ +|++++.||.|++||+...
T Consensus 262 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp EEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT
T ss_pred EEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC
Confidence 9999999999999999999888889999999999999999 9999999999999998643
No 102
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.2e-32 Score=247.51 Aligned_cols=242 Identities=12% Similarity=0.139 Sum_probs=202.6
Q ss_pred eecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCC--EEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q 018860 57 FEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGD--VLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR 133 (349)
Q Consensus 57 ~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~--~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~ 133 (349)
+..|..+|.+++|++++.+|++++.|+.|++||+.+++ .+..+. |...|.+++|+|++++|++++.|+.|++||+..
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45699999999999999999999999999999999886 666664 888999999999999999999999999999865
Q ss_pred CCCC-CceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce---EEee--cCCCCeeEEEEcCCCcEEEE-ec
Q 018860 134 PDAP-PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI---VQTL--ETKSPVTSAEVSQDGRYITT-AD 206 (349)
Q Consensus 134 ~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~~-~~ 206 (349)
.... ...+..|...+.++.|+|.+ .++++++.+|.|++||++.+.. ...+ .+...+.++.|+|++.++++ +.
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 4321 12235678899999998765 5566777789999999988762 2333 23568999999999987765 56
Q ss_pred CCeEEEEecC------------------CceeeEEEc-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEec
Q 018860 207 GSTVKFWDAN------------------HFGLVKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK 267 (349)
Q Consensus 207 d~~i~iwd~~------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~ 267 (349)
|+.|++||++ ...++..+. +...+..++|+|. ++++++++.|+.|++||+.+++.+..+.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCC-CCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 9999999954 456666653 3456788999884 7899999999999999999999999999
Q ss_pred CCCcceeEEEEccCCCeEEEecCCCCEEEecCCC
Q 018860 268 GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 268 ~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
.|..+|.+++|+|++.+|++| .|+.|++|++..
T Consensus 242 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 242 SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999988887 899999999865
No 103
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.4e-32 Score=240.65 Aligned_cols=220 Identities=19% Similarity=0.241 Sum_probs=174.1
Q ss_pred EEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCC--CEEEEe-ccCCeEEEEEEcCC--CCEEEEEeCCCeEEEE
Q 018860 55 GTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG--DVLHSF-EHKHIVRACSFSED--THLLLTGGMEKILRIF 129 (349)
Q Consensus 55 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~--~~~~~~-~~~~~v~~~~~s~~--~~~l~s~~~d~~i~lw 129 (349)
..+.+|.+.|++++|++++++|+||+.|++|+|||+.++ +.+..+ .|...|.+++|+|+ +++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 457899999999999999999999999999999998743 455665 48899999999864 8999999999999999
Q ss_pred ECCCCC-CCCceeccCCCCeEEEEEecCC-CeEEEEeeCCCeEEEEECCCCce--EEee-cCCCCeeEEEEcCCCcEEEE
Q 018860 130 DLNRPD-APPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEI--VQTL-ETKSPVTSAEVSQDGRYITT 204 (349)
Q Consensus 130 d~~~~~-~~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~ 204 (349)
|+.... .....+..|...|.+++|+|.. +.++++++.|++|++||++++.. ...+ .+...+.++.|+|++..-..
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 997653 2334556788899999999863 56777888899999999987632 2233 34557889999987521100
Q ss_pred ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCc----EEEEecCCCcceeEEEEcc
Q 018860 205 ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGN----EIACNKGHHGPVHCVRFSP 280 (349)
Q Consensus 205 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~----~~~~~~~h~~~i~~l~~sp 280 (349)
. ...+.++++|++|+.|++|++||+.+++ ....+.+|..+|.+++|+|
T Consensus 163 ~----------------------------~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp 214 (297)
T 2pm7_B 163 E----------------------------HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 214 (297)
T ss_dssp -----------------------------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred c----------------------------CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECC
Confidence 0 0011236789999999999999998766 5567889999999999999
Q ss_pred CC---CeEEEecCCCCEEEecCCCC
Q 018860 281 GG---ESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 281 ~~---~~l~sgs~Dg~v~vW~~~~~ 302 (349)
++ .+|||||.|++|++|++...
T Consensus 215 ~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 215 TVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCCceEEEEEECCCcEEEEEeCCC
Confidence 85 78999999999999998653
No 104
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.7e-32 Score=242.89 Aligned_cols=253 Identities=15% Similarity=0.212 Sum_probs=201.5
Q ss_pred eCCCCCeEEEeecccCCeEEEEECCC---CCeeEEeeCCCeEEEEECCC-CCEE-EEe-ccCCeEEEEEEcCCCCEEEEE
Q 018860 47 NGETGDWIGTFEGHKGAVWSCCLDTN---ALRAASASADFSAKVWDALT-GDVL-HSF-EHKHIVRACSFSEDTHLLLTG 120 (349)
Q Consensus 47 ~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~D~~i~vWd~~~-~~~~-~~~-~~~~~v~~~~~s~~~~~l~s~ 120 (349)
+....+.+..+++|.+.|.+++|+|+ +.+|++|+.|+.|++||+.+ +..+ ..+ .|...|.+++|+|++++|+++
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE
Confidence 34455678889999999999999999 59999999999999999987 5554 444 488999999999999999999
Q ss_pred eCCCeEEEEECCCCCCCCceeccCCCCeEEEEEe-cCCCeEEEEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCC
Q 018860 121 GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWL-HSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDG 199 (349)
Q Consensus 121 ~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~ 199 (349)
+.|+.|++||+..... .....|...+.++.|. .+++.++++++.||.|++||+++++.+..+..+..+.++.+.++
T Consensus 105 ~~dg~v~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~- 181 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQA--IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP- 181 (368)
T ss_dssp ETTSEEEEEETTTTEE--EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT-
T ss_pred cCCCcEEEEEcCCCCc--eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC-
Confidence 9999999999976442 3356788999999994 34566777888889999999999999888888777777777754
Q ss_pred cEEEEecCCeEEEEecCCceeeEEE-c--CCCceEEeeecCCC---CCEEEEecCCCeEEEEeCCCC---cEEEEecCCC
Q 018860 200 RYITTADGSTVKFWDANHFGLVKSY-N--MPCTIESASLEPKY---GNKFVAGGEDMWVRFFDFHTG---NEIACNKGHH 270 (349)
Q Consensus 200 ~~l~~~~d~~i~iwd~~~~~~~~~~-~--~~~~~~~~~~~~~~---~~~~~~~~~d~~i~v~d~~~~---~~~~~~~~h~ 270 (349)
.+++++.++.+.+|+++........ . .......+.+.+.. ...+++++.|+.|++||+... ..+..+.+|.
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 261 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHR 261 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSE
T ss_pred eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeee
Confidence 4566677899999999875433222 1 12233334433321 123899999999999999887 4566677776
Q ss_pred c------------ceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 271 G------------PVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 271 ~------------~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
. +|.+++|+|++++|++|+.||.|++||+...
T Consensus 262 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 262 SNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp EC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred cccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC
Confidence 6 7999999999999999999999999998754
No 105
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.4e-31 Score=233.99 Aligned_cols=251 Identities=16% Similarity=0.245 Sum_probs=209.9
Q ss_pred cccccceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCC
Q 018860 4 KKIAVPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADF 83 (349)
Q Consensus 4 ~~~~~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~ 83 (349)
|++...+.+++|...|++++|+| ++++|++|+.|++|++|+..+++.++.+.+|...+.++.+ ++..+++++.++
T Consensus 55 g~~~~~~~~~~~~~~V~~v~~~~---~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~ 129 (318)
T 4ggc_A 55 GDILQLLQMEQPGEYISSVAWIK---EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSG 129 (318)
T ss_dssp CCEEEEEECCSTTCCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCEEEEEEecCCCCeEEEEEECC---CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCC
Confidence 44434455678999999999997 8999999999999999999999999999999998876555 567899999999
Q ss_pred eEEEEECCCCC-EEEE-eccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCC---CceeccCCCCeEEEEEecCCC
Q 018860 84 SAKVWDALTGD-VLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP---PREVDRSPGSVRTVAWLHSDQ 158 (349)
Q Consensus 84 ~i~vWd~~~~~-~~~~-~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~---~~~~~~~~~~i~~~~~~~~~~ 158 (349)
.+++|+..... .+.. ..|...+..++++++++++++++.|+.|++||+.+.+.. ......+.+.+.++.+.+.+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 209 (318)
T 4ggc_A 130 HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS 209 (318)
T ss_dssp EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST
T ss_pred ceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC
Confidence 99999988764 3333 358889999999999999999999999999999765432 233456677899999998777
Q ss_pred eEE--EEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEE-e--cCCeEEEEecCCceeeEEEcC-CCceEE
Q 018860 159 TIL--STCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITT-A--DGSTVKFWDANHFGLVKSYNM-PCTIES 232 (349)
Q Consensus 159 ~~l--~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~--~d~~i~iwd~~~~~~~~~~~~-~~~~~~ 232 (349)
.++ ++++.+++|++||.+.............+..+.+++++..+++ + .|+.|++||+++++++..+.. ...+.+
T Consensus 210 ~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~ 289 (318)
T 4ggc_A 210 NVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 289 (318)
T ss_dssp TEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred cEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 665 4566789999999999988888888888999999998876543 3 489999999999999888764 567889
Q ss_pred eeecCCCCCEEEEecCCCeEEEEeCCCC
Q 018860 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTG 260 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~~i~v~d~~~~ 260 (349)
++|+|. +++|++|+.|++|++||+.+.
T Consensus 290 l~~spd-g~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 290 LTMSPD-GATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEECTT-SSCEEEEETTTEEEEECCSCC
T ss_pred EEEcCC-CCEEEEEecCCeEEEEECCCC
Confidence 999984 889999999999999998754
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.3e-31 Score=238.47 Aligned_cols=284 Identities=15% Similarity=0.145 Sum_probs=229.4
Q ss_pred eccCCCceeeEEEeecCCCccEE-EEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeE-EeeCCCeEEEEE
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFL-ISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAA-SASADFSAKVWD 89 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l-~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~vWd 89 (349)
+.+|.. +.+++|+| +|++| ++++.|+++++|+..+++.+..+..|. .+.+++|+|++++|+ +++.|+.|++||
T Consensus 28 ~~~~~~-~~~~~~s~---dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 28 IPVGSN-PMGAVISP---DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVID 102 (391)
T ss_dssp EECSSS-EEEEEECT---TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred eecCCC-cceEEECC---CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEE
Confidence 455654 78999997 88876 677899999999999999999988776 899999999999875 555779999999
Q ss_pred CCCCCEEEEeccCCeEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 018860 90 ALTGDVLHSFEHKHIVRACSFSEDTHLL-LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMG 168 (349)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 168 (349)
+.+++.+..+.+...+.+++|+|+++.+ ++++.|+.|++||+.+.+. ...+.. ...+..+.|+|++..+++++..++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 103 TTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-INTVSV-GRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEEC-CSSEEEEEECTTSSEEEEEETTTT
T ss_pred CCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-EEEEec-CCCcceEEECCCCCEEEEEeCCCC
Confidence 9999998888887889999999999977 6888899999999875432 222332 356789999988888878888889
Q ss_pred eEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEE-e---cCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEE-
Q 018860 169 GVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITT-A---DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKF- 243 (349)
Q Consensus 169 ~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 243 (349)
.|++||+++++....+.....+..+.++|+++++.+ + .++.|++||+++.+.+..+.....+..++++|. ++++
T Consensus 181 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~ 259 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPD-GKKVY 259 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTT-SSEEE
T ss_pred EEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccC-CCEEE
Confidence 999999999998888887778899999999987654 3 479999999999988888877777788899985 5555
Q ss_pred EEecCCCeEEEEeCCCCcEEEEecCCCccee---EEE------------EccCC----------CeEEEecCCCCEEEec
Q 018860 244 VAGGEDMWVRFFDFHTGNEIACNKGHHGPVH---CVR------------FSPGG----------ESYASGSEDGTIRIWQ 298 (349)
Q Consensus 244 ~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~---~l~------------~sp~~----------~~l~sgs~Dg~v~vW~ 298 (349)
++++.|+.|++||+.+++.+..+..|..+.. .+. |+.+. ..+.+.+.|.++++|+
T Consensus 260 ~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 339 (391)
T 1l0q_A 260 VALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWD 339 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEE
T ss_pred EEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEE
Confidence 6778999999999999998888776654421 122 33221 2366778899999999
Q ss_pred CCCCC
Q 018860 299 TGPVT 303 (349)
Q Consensus 299 ~~~~~ 303 (349)
++.+.
T Consensus 340 ~~~g~ 344 (391)
T 1l0q_A 340 FGDGS 344 (391)
T ss_dssp CSSSC
T ss_pred CCCCc
Confidence 86543
No 107
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=254.16 Aligned_cols=239 Identities=11% Similarity=0.197 Sum_probs=191.1
Q ss_pred ccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCC-----------EEEEec-cC------------CeEEEEEEcCCC-
Q 018860 60 HKGAVWSCCLDTNALRAASASADFSAKVWDALTGD-----------VLHSFE-HK------------HIVRACSFSEDT- 114 (349)
Q Consensus 60 h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~-----------~~~~~~-~~------------~~v~~~~~s~~~- 114 (349)
|.+.|.+++|+|++.+|++|+.||.|+||++.+++ ....+. |. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999998776 344443 66 779999999998
Q ss_pred -CEEEEEeCCCeEEEEECCCCCCC--------------------------------------C-ceeccCCCCeEEEEEe
Q 018860 115 -HLLLTGGMEKILRIFDLNRPDAP--------------------------------------P-REVDRSPGSVRTVAWL 154 (349)
Q Consensus 115 -~~l~s~~~d~~i~lwd~~~~~~~--------------------------------------~-~~~~~~~~~i~~~~~~ 154 (349)
.+|++++.|++|++||+...... . ....+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999998542110 0 1135688899999999
Q ss_pred cCCCeEEEEeeCCCeEEEEECCC-CceEEee--------cCCCCeeEEEEcCCC-cEEE-EecCCeEEEEecCCcee---
Q 018860 155 HSDQTILSTCTDMGGVRLWDVRS-GEIVQTL--------ETKSPVTSAEVSQDG-RYIT-TADGSTVKFWDANHFGL--- 220 (349)
Q Consensus 155 ~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~--------~~~~~v~~~~~~~~~-~~l~-~~~d~~i~iwd~~~~~~--- 220 (349)
|++. +++++ .|+.|++||+++ ++.+..+ .+...+.+++|+|++ .+++ ++.|+.|++||+++...
T Consensus 187 ~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 187 SDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp TTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred CCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 8654 55566 689999999984 4454432 345679999999998 6655 56799999999998776
Q ss_pred -eEEEcCCC-------------ceEEeeecCCCCCEEEEecCCCeEEEEeCCC-CcEEEEecCCCcc-------------
Q 018860 221 -VKSYNMPC-------------TIESASLEPKYGNKFVAGGEDMWVRFFDFHT-GNEIACNKGHHGP------------- 272 (349)
Q Consensus 221 -~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~-~~~~~~~~~h~~~------------- 272 (349)
...+..+. .+..++|+| +++++++++. +.|++||+++ ++.+..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 56665543 688999998 4889999988 9999999997 7888888888642
Q ss_pred --eeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 273 --VHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 273 --i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
+..++|+|++++|++|+.||.|++||+...
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 334999999999999999999999998654
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=253.39 Aligned_cols=257 Identities=12% Similarity=0.115 Sum_probs=196.9
Q ss_pred eccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECC
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDAL 91 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~ 91 (349)
+.||.+.|.+|+|+| +| .++.+.+|+.+.. .+.++ +|...|++|+|+|+|++||+++.||.|++||..
T Consensus 48 l~gh~~~v~~V~FsP---dg-------~~~~~~~~~~~~~-~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~ 115 (588)
T 2j04_A 48 INCNSKNLFHVKEFP---LE-------FENKLDFELAQQN-GLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN 115 (588)
T ss_dssp CSSBGGGTEEEEEEC---CC-------CCCTTTTSCCCSS-CSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETT
T ss_pred ecCCCccEEEEEECC---CC-------CcceEEEEeCCCc-eEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 379999999999998 66 5677777765422 22232 568889999999999999999999999999965
Q ss_pred CCCEEEEeccCC-----eEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCC--C----Ccee----ccCCCCeEEEEEecC
Q 018860 92 TGDVLHSFEHKH-----IVRACSFSEDTHLLLTGGMEKILRIFDLNRPDA--P----PREV----DRSPGSVRTVAWLHS 156 (349)
Q Consensus 92 ~~~~~~~~~~~~-----~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~--~----~~~~----~~~~~~i~~~~~~~~ 156 (349)
+ ++..+.|.. .|.+++|||||++|++|+.||+|++||+..... + ...+ .+|...|.+++|+|+
T Consensus 116 ~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd 193 (588)
T 2j04_A 116 K--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED 193 (588)
T ss_dssp E--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT
T ss_pred c--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC
Confidence 4 566556443 499999999999999999999999999976532 1 1233 567789999999986
Q ss_pred CCeEEEEeeCCCeEEEEECCCCce---EEeec--CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCcee-eEEEcCCCce
Q 018860 157 DQTILSTCTDMGGVRLWDVRSGEI---VQTLE--TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGL-VKSYNMPCTI 230 (349)
Q Consensus 157 ~~~~l~~~~~dg~v~vwd~~~~~~---~~~~~--~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~-~~~~~~~~~~ 230 (349)
+ +++++.|++|++||+..++. .+++. +...|.+++|+ +..++++.+++|++||+.+... ...+.+...+
T Consensus 194 g---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~V 268 (588)
T 2j04_A 194 V---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKTGSLENF 268 (588)
T ss_dssp E---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEECSCCSCC
T ss_pred c---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEcCCCceE
Confidence 5 45666679999999988773 34553 34579999999 4666665679999999998877 4444666778
Q ss_pred EEeee--cCCCCCEEEEecCCCeEEEEeCCC-----------------------CcEEEEecCCCcceeEEEEccCCCeE
Q 018860 231 ESASL--EPKYGNKFVAGGEDMWVRFFDFHT-----------------------GNEIACNKGHHGPVHCVRFSPGGESY 285 (349)
Q Consensus 231 ~~~~~--~~~~~~~~~~~~~d~~i~v~d~~~-----------------------~~~~~~~~~h~~~i~~l~~sp~~~~l 285 (349)
..+.+ +|+ +..+++++.||+ ++|.... +..+..+. +...|++++|||+|+.+
T Consensus 269 ~~va~~~s~d-~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va~SPdG~~l 345 (588)
T 2j04_A 269 HIIPLNHEKE-STILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGISLSPDGYSI 345 (588)
T ss_dssp CEEEETTCSS-CEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEEEECTTSSEE
T ss_pred EEEEeeeCCC-CCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec-cceEEEEEEECCCCCEE
Confidence 88888 764 678999999999 9998742 11111122 24569999999999999
Q ss_pred EEecC
Q 018860 286 ASGSE 290 (349)
Q Consensus 286 ~sgs~ 290 (349)
|+++.
T Consensus 346 A~~~~ 350 (588)
T 2j04_A 346 AIVYD 350 (588)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98874
No 109
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-31 Score=237.95 Aligned_cols=247 Identities=14% Similarity=0.203 Sum_probs=211.1
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCC-----Ce
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASAD-----FS 84 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~ 84 (349)
..+.+|.++|.+++|+| ++++|++++.|+.|++|+..+++.+..+. |...|.+++|++++.+|++++.+ +.
T Consensus 68 ~~~~~h~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~ 143 (369)
T 3zwl_B 68 GTLDGHTGTIWSIDVDC---FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGS 143 (369)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCE
T ss_pred hhhhhcCCcEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCE
Confidence 45679999999999997 88999999999999999999999999888 88899999999999999999999 99
Q ss_pred EEEEECCCCCE-----------E-EEeccCC--eEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEE
Q 018860 85 AKVWDALTGDV-----------L-HSFEHKH--IVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRT 150 (349)
Q Consensus 85 i~vWd~~~~~~-----------~-~~~~~~~--~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~ 150 (349)
|++||+..+.. . ....|.. .+.+++|+|++++|++++.|+.|++||+.........+..|...+.+
T Consensus 144 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 144 INIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISD 223 (369)
T ss_dssp EEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEE
T ss_pred EEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeE
Confidence 99999876532 1 1122444 89999999999999999999999999998644455667778889999
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEe-cCC--------------eEEEEec
Q 018860 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-DGS--------------TVKFWDA 215 (349)
Q Consensus 151 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~--------------~i~iwd~ 215 (349)
++|+|++ .+|++++.||.|++||+++++.+..+....++..+.++|++.+++++ .++ .+++||.
T Consensus 224 ~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 224 MQFSPDL-TYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp EEECTTS-SEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred EEECCCC-CEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 9998755 45567777899999999999999999888899999999999987664 455 7999999
Q ss_pred CCceeeEEEc-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcE
Q 018860 216 NHFGLVKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE 262 (349)
Q Consensus 216 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~ 262 (349)
.+...+..+. +...+..++|+| ++++|++++.|+.|++|++..+..
T Consensus 303 ~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 303 IFEEEIGRVQGHFGPLNTVAISP-QGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp TTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEEECHHHH
T ss_pred CCCcchhheecccCcEEEEEECC-CCCEEEEEcCCCeEEEEECccccc
Confidence 9988887765 445678899998 488999999999999999876543
No 110
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=9e-32 Score=234.05 Aligned_cols=253 Identities=14% Similarity=0.133 Sum_probs=170.2
Q ss_pred EEEEEecCCCeEEEeCCCC---CeEEEeecccCCeEEEEECCCCC----------------eeEEeeCCCeEEEEECCCC
Q 018860 33 FLISASKDSSPMLRNGETG---DWIGTFEGHKGAVWSCCLDTNAL----------------RAASASADFSAKVWDALTG 93 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~---~~~~~~~~h~~~v~~~~~~~~~~----------------~l~s~s~D~~i~vWd~~~~ 93 (349)
.+++++ ..++++|+..++ ++++++.+|..+|..+.+.||-. .|+.++.|+.++-|.+..+
T Consensus 56 ~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 56 CIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred EEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence 455554 478999998888 78999999998887777666322 1222222222222211111
Q ss_pred CEEEEeccCCeEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCCCCCceeccCCCCeEEEEEec--CCCeEEEEeeCCCe
Q 018860 94 DVLHSFEHKHIVRACSFSEDTHLLLTGG--MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH--SDQTILSTCTDMGG 169 (349)
Q Consensus 94 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~l~~~~~dg~ 169 (349)
|...|..+ ++++++.+++ .|+.|++|++............|...+..++|++ .++.+|++++.|++
T Consensus 135 -------~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~T 204 (356)
T 2w18_A 135 -------NIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNN 204 (356)
T ss_dssp -------EEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSE
T ss_pred -------CeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCc
Confidence 11112221 3444444433 5777777777443332333445666666666665 46778889999999
Q ss_pred EEEEECCCCceEEeecCC----CCeeEEEEcCCCcEEE-------------EecCCeEEEEecCCceeeEEEcC--C---
Q 018860 170 VRLWDVRSGEIVQTLETK----SPVTSAEVSQDGRYIT-------------TADGSTVKFWDANHFGLVKSYNM--P--- 227 (349)
Q Consensus 170 v~vwd~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~-------------~~~d~~i~iwd~~~~~~~~~~~~--~--- 227 (349)
||+||+++|++++++..+ ..+.+++|+|++++++ ++.|++|++||..+++.+..+.. +
T Consensus 205 IkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh 284 (356)
T 2w18_A 205 IVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQ 284 (356)
T ss_dssp EEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTC
T ss_pred EEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCC
Confidence 999999999999998642 2467788999998753 34578999999999887765421 1
Q ss_pred -CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCccee-EEEEccCCCeEEEecCCCCEEEecC
Q 018860 228 -CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVH-CVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 228 -~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~-~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
..+....+. +..+++++.|++|++||+.+++.+.++++|...+. +++|||+|++|+|||.|++|||||+
T Consensus 285 ~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 285 AGRFLEGDVK---DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCEEEEEEE---TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cceeEccccC---CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 112211221 55789999999999999999999999999988765 5899999999999999999999985
No 111
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.8e-31 Score=241.37 Aligned_cols=280 Identities=16% Similarity=0.216 Sum_probs=197.6
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCC---CCeeEEeeCCCeEEEEE
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTN---ALRAASASADFSAKVWD 89 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~D~~i~vWd 89 (349)
.+|.++|.+++|+| .++++|++++.|+.+++|+..+++.+..+. |...+.++++.+. +.++++++.|+.|++||
T Consensus 96 ~~~~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 96 DVHRYSVETVQWYP--HDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp TCCSSCEEEEEECT--TCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccCCCcEEEEEEcc--CCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 36999999999997 256799999999999999999998888776 7778999999874 45999999999999999
Q ss_pred CCCCCEEEEec-cCCeEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCCCCcee---------------ccCCCCeEEEE
Q 018860 90 ALTGDVLHSFE-HKHIVRACSFSEDTH-LLLTGGMEKILRIFDLNRPDAPPREV---------------DRSPGSVRTVA 152 (349)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~---------------~~~~~~i~~~~ 152 (349)
+.+++.+..+. |...|.+++|+|++. ++++++.|+.|++||+.........+ ..|...+.+++
T Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 173 LKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp SSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred CCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 99998887776 888999999999998 58899999999999997654322222 56778899999
Q ss_pred EecCCCeEEEEeeCCCeEEEEECCCCceEEeecCC-------CCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEc
Q 018860 153 WLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-------SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYN 225 (349)
Q Consensus 153 ~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~ 225 (349)
|+|++ .++++++.||.|++||+++++........ .............+++++.++.|++||+.+..++..+.
T Consensus 253 ~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 331 (408)
T 4a11_B 253 FTSDG-LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK 331 (408)
T ss_dssp ECTTS-SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred EcCCC-CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec
Confidence 98754 45667777899999999988765433211 11222333445677788889999999999999888876
Q ss_pred -CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccC-CCeEEEecCCCCEEEecCC
Q 018860 226 -MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPG-GESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 226 -~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~-~~~l~sgs~Dg~v~vW~~~ 300 (349)
+...+..++|+|. +++|++++.|+.|++||+.+++.+.....+.. ...+.|. ...+.+.+.|+.+++|+..
T Consensus 332 ~~~~~v~~~~~s~~-~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 332 GHYKTVDCCVFQSN-FQELYSGSRDCNILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp CCSSCEEEEEEETT-TTEEEEEETTSCEEEEEECC------------------------------------------
T ss_pred cCCCeEEEEEEcCC-CCEEEEECCCCeEEEEeCCCCCccCCCCceEe---ccccccccceeecccCccCceeecCCc
Confidence 4456788999985 78999999999999999999887755443322 2233333 3345678889999999753
No 112
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.8e-32 Score=247.18 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=200.8
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCC-------CeEEEeecccCCeEEEEECCCC-CeeEEeeC
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETG-------DWIGTFEGHKGAVWSCCLDTNA-LRAASASA 81 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~ 81 (349)
..+.+|.++|.+++|+|. ++++|++|+.|++|++|+..++ +.+..+.+|...|.+++|+|++ .+|++++.
T Consensus 75 ~~~~~h~~~V~~~~~~p~--~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPH--NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp CCBCCCSSCEEEEEECTT--CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred ceEecCCCCEEEEEeCCC--CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 346899999999999962 6789999999999999999887 6688999999999999999998 69999999
Q ss_pred CCeEEEEECCCCCEEEEe---ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCcee-ccCCCC-eEEEEEecC
Q 018860 82 DFSAKVWDALTGDVLHSF---EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREV-DRSPGS-VRTVAWLHS 156 (349)
Q Consensus 82 D~~i~vWd~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~-~~~~~~-i~~~~~~~~ 156 (349)
|+.|++||+.+++.+..+ .|...|.+++|+|++++|++++.|+.|++||+..... ...+ ..|.+. +..+.|+++
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV-VAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE-EEEEECSSCSSSCCEEEECST
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce-eeeeccCCCCCcceEEEEcCC
Confidence 999999999999988887 3888999999999999999999999999999976443 2333 456554 788999865
Q ss_pred CCeEEEEe---eCCCeEEEEECCCCce---EEeecCCCCeeEEEEcCCCcEEE-Ee-cCCeEEEEecCCce----eeEEE
Q 018860 157 DQTILSTC---TDMGGVRLWDVRSGEI---VQTLETKSPVTSAEVSQDGRYIT-TA-DGSTVKFWDANHFG----LVKSY 224 (349)
Q Consensus 157 ~~~~l~~~---~~dg~v~vwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~iwd~~~~~----~~~~~ 224 (349)
+.+++++ +.++.|++||+++++. ...+.+...+..+.|+|++.+++ ++ .|+.|++||+.+.. .+..+
T Consensus 232 -~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 232 -GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp -TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred -CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 6677777 6789999999998654 23334566799999999998874 45 58999999998876 33444
Q ss_pred cCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcE
Q 018860 225 NMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE 262 (349)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~ 262 (349)
.....+..++|.|. +..++ +.++.+++|++.+++.
T Consensus 311 ~~~~~v~~~~~sp~-~~~~~--s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 311 SSKESQRGMGYMPK-RGLEV--NKCEIARFYKLHERKC 345 (402)
T ss_dssp CCSSCCSEEEECCG-GGSCG--GGTEEEEEEEEETTEE
T ss_pred ccCCcccceEEecc-cccce--ecceeEEEEEcCCCcE
Confidence 44567788999985 44443 4567999999877543
No 113
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.2e-32 Score=247.99 Aligned_cols=250 Identities=11% Similarity=0.092 Sum_probs=183.7
Q ss_pred cceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeec--ccCCeEEEEECCCCCeeEEeeCCCeE
Q 018860 8 VPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEG--HKGAVWSCCLDTNALRAASASADFSA 85 (349)
Q Consensus 8 ~~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~~i 85 (349)
..+.+.||.++|++|+|+|. ++++|+|||.|++|++||..++........ +...+.+++|++++.+|++|+.|+.|
T Consensus 156 ~~~~~~gH~~~V~~l~f~p~--~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i 233 (435)
T 4e54_B 156 TFIKGIGAGGSITGLKFNPL--NTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNV 233 (435)
T ss_dssp EEECCCSSSCCCCEEEECSS--CTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBE
T ss_pred eEEEccCCCCCEEEEEEeCC--CCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcE
Confidence 34556799999999999973 577999999999999999976544333333 34557889999999999999999999
Q ss_pred EEEECCCCCEEEEeccCCeEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCCCC--ceeccCCCCeEEEEEecCCCeEEE
Q 018860 86 KVWDALTGDVLHSFEHKHIVRACSFSEDTH-LLLTGGMEKILRIFDLNRPDAPP--REVDRSPGSVRTVAWLHSDQTILS 162 (349)
Q Consensus 86 ~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d~~i~lwd~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~l~ 162 (349)
++||+.+........|...|.+++|+|++. ++++|+.|+.|++||+....... ....+|...|.+++|+|++ .+|+
T Consensus 234 ~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg-~~l~ 312 (435)
T 4e54_B 234 ILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG-ARLL 312 (435)
T ss_dssp EEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTS-SEEE
T ss_pred eeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCC-CeeE
Confidence 999987544333335889999999999876 78899999999999997654322 2335688899999998755 4566
Q ss_pred EeeCCCeEEEEECCCCceEEeecCCC-------CeeEEEEcCCCcEEEEe-------------cCCeEEEEecCCceeeE
Q 018860 163 TCTDMGGVRLWDVRSGEIVQTLETKS-------PVTSAEVSQDGRYITTA-------------DGSTVKFWDANHFGLVK 222 (349)
Q Consensus 163 ~~~~dg~v~vwd~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~-------------~d~~i~iwd~~~~~~~~ 222 (349)
+++.||+|++||++++.....+..+. ......++|++.+++++ +++.|++||..++..+.
T Consensus 313 s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~ 392 (435)
T 4e54_B 313 TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC 392 (435)
T ss_dssp EEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred EEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence 77788999999999987665543211 12234455555444332 24579999999988877
Q ss_pred EEcC--CCceEEe-eecCCCCCEEEEecCCCeEEEEeCCCCcE
Q 018860 223 SYNM--PCTIESA-SLEPKYGNKFVAGGEDMWVRFFDFHTGNE 262 (349)
Q Consensus 223 ~~~~--~~~~~~~-~~~~~~~~~~~~~~~d~~i~v~d~~~~~~ 262 (349)
.+.. ...+.++ +|+|. +.+|++|+ |+.|++||+.+++.
T Consensus 393 ~l~~~~~~~v~s~~~fspd-g~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 393 QLYDPESSGISSLNEFNPM-GDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp EECCSSCCCCCCEEEECTT-SSCEEEEC-SSEEEECCCC----
T ss_pred EEeCCCCCcEEEEEEECCC-CCEEEEEc-CCcEEEEECCcCee
Confidence 6543 2334444 57774 77777765 88999999988764
No 114
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.4e-31 Score=238.62 Aligned_cols=243 Identities=9% Similarity=0.101 Sum_probs=184.9
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEE-----------ecCCCeEEEeCCCCC-eE---EEe-----ecccCCeEEEEE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISA-----------SKDSSPMLRNGETGD-WI---GTF-----EGHKGAVWSCCL 69 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~-----------s~d~~i~iw~~~~~~-~~---~~~-----~~h~~~v~~~~~ 69 (349)
+.|.+|.+.|.++.|+ +..+++| +.|+++|+|+..... .+ ... ..+...+.+++|
T Consensus 67 ~~l~~~~~~v~s~~~~-----~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f 141 (365)
T 4h5i_A 67 FALEDNDDSPTAIDAS-----KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYI 141 (365)
T ss_dssp EECCTTSCCCCEEEEE-----TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEE
T ss_pred EEccCCCCceEEEEeC-----CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEE
Confidence 4578899999999776 3355554 567788999865443 22 221 124456899999
Q ss_pred CCCCCeeEE--eeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCC-ceeccCCC
Q 018860 70 DTNALRAAS--ASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPP-REVDRSPG 146 (349)
Q Consensus 70 ~~~~~~l~s--~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~-~~~~~~~~ 146 (349)
+|||++|++ ++.|++|||||+.+++++..+.|...|.+++|+|+|+++++++.++ +++|+........ .....|..
T Consensus 142 SpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 142 SREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp CTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTE
T ss_pred cCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCC
Confidence 999998764 5579999999999999999999999999999999999999998665 5556554433221 23345677
Q ss_pred CeEEEEEecCCCeEEEEeeCCC---eEEEEECCCCceE----Eeec-CCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCC
Q 018860 147 SVRTVAWLHSDQTILSTCTDMG---GVRLWDVRSGEIV----QTLE-TKSPVTSAEVSQDGRYITT-ADGSTVKFWDANH 217 (349)
Q Consensus 147 ~i~~~~~~~~~~~~l~~~~~dg---~v~vwd~~~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~ 217 (349)
.+.+++|+|++..+++++.+.+ .+++||+...... ..+. +..+|.+++|+|++++|++ +.|++|+|||+++
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 8999999987666555444422 6899998776532 2333 4568999999999998865 5699999999999
Q ss_pred ceeeEEEc--CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCC
Q 018860 218 FGLVKSYN--MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259 (349)
Q Consensus 218 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~ 259 (349)
++++..+. +...+.+++|+|+ +++|++|+.|++|||||+..
T Consensus 301 ~~~~~~~~~gH~~~V~~v~fSpd-g~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 301 LSMSKIFKQAHSFAITEVTISPD-STYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TEEEEEETTSSSSCEEEEEECTT-SCEEEEEETTSEEEEEECCT
T ss_pred CcEEEEecCcccCCEEEEEECCC-CCEEEEEeCCCeEEEEEcCC
Confidence 99888753 4667899999994 89999999999999999864
No 115
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.3e-32 Score=238.22 Aligned_cols=222 Identities=20% Similarity=0.290 Sum_probs=168.8
Q ss_pred EeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCC--EEEEe-ccCCeEEEEEEcC--CCCEEEEEeCCCeEEEEE
Q 018860 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGD--VLHSF-EHKHIVRACSFSE--DTHLLLTGGMEKILRIFD 130 (349)
Q Consensus 56 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~--~~~~~-~~~~~v~~~~~s~--~~~~l~s~~~d~~i~lwd 130 (349)
.+.+|.+.|++++|++++++|+||+.|++|+|||+.++. .+..+ .|...|.+++|+| ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 457899999999999999999999999999999998774 34444 4889999999986 489999999999999999
Q ss_pred CCCCCC-CCceeccCCCCeEEEEEecCC-CeEEEEeeCCCeEEEEECCCCce---EEeec-CCCCeeEEEEcCCCcEEEE
Q 018860 131 LNRPDA-PPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEI---VQTLE-TKSPVTSAEVSQDGRYITT 204 (349)
Q Consensus 131 ~~~~~~-~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~~---~~~~~-~~~~v~~~~~~~~~~~l~~ 204 (349)
+..... ....+.+|...|.+++|+|.. +.+|++++.|++|++||++.+.. ...+. +...+.++.|+|+...
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~--- 164 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP--- 164 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC---
Confidence 976432 223456788999999999863 67788899999999999987632 22222 3456888888887421
Q ss_pred ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCC---cEEEEecCCCcceeEEEEccC
Q 018860 205 ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTG---NEIACNKGHHGPVHCVRFSPG 281 (349)
Q Consensus 205 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~---~~~~~~~~h~~~i~~l~~sp~ 281 (349)
+.+ .+. +. ...+..+.+|++|+.|+.|++||+... +.+..+.+|..+|.+++|+|+
T Consensus 165 ---~~~--~~~-----------~~-----~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~ 223 (316)
T 3bg1_A 165 ---GSL--IDH-----------PS-----GQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPS 223 (316)
T ss_dssp ----------------------CC-----SCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCC
T ss_pred ---ccc--ccc-----------cc-----ccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCC
Confidence 000 000 00 001223578999999999999999755 356778899999999999998
Q ss_pred C----CeEEEecCCCCEEEecCCC
Q 018860 282 G----ESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 282 ~----~~l~sgs~Dg~v~vW~~~~ 301 (349)
+ .+|+|||.||+|++|++..
T Consensus 224 ~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 224 IGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp SSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCCCceEEEEcCCCeEEEEEccC
Confidence 6 7899999999999999865
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.5e-31 Score=236.37 Aligned_cols=246 Identities=11% Similarity=0.083 Sum_probs=179.2
Q ss_pred EEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEE-EEEeCC
Q 018860 45 LRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLL-LTGGME 123 (349)
Q Consensus 45 iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~d 123 (349)
+|...+.+.+.++++|...|++++|+|++++|++|+.|+ ++||+..+++......+. .+..+++.++++.+ ++++.|
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 80 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGVK 80 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSST
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECCc
Confidence 455566677778899999999999999999999988775 789999887766555443 47788888888877 567788
Q ss_pred CeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCC-ceEEeecCCCCeeEEEEcCCCcEE
Q 018860 124 KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG-EIVQTLETKSPVTSAEVSQDGRYI 202 (349)
Q Consensus 124 ~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~l 202 (349)
++|++||+.+.+. ...+ .+...+.++.|.+. . ++.+. ++.|++||+.++ +.+..+.. +...+++++ ..++
T Consensus 81 ~~v~iWd~~~~~~-~~~~-~~~~~v~~v~~~~~--~-~~~~~-~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~-~~la 151 (355)
T 3vu4_A 81 EVVHIWDDVKKQD-VSRI-KVDAPVKDLFLSRE--F-IVVSY-GDVISVFKFGNPWKRITDDIR--FGGVCEFSN-GLLV 151 (355)
T ss_dssp TEEEEEETTTTEE-EEEE-ECSSCEEEEEECSS--E-EEEEE-TTEEEEEESSTTCCBSSCCEE--EEEEEEEET-TEEE
T ss_pred cEEEEEECCCCcE-EEEE-ECCCceEEEEEcCC--E-EEEEE-cCEEEEEECCCCceeeEEecc--CCceEEEEc-cEEE
Confidence 9999999876433 2223 35678999998653 2 33344 489999999988 66655554 444556666 3333
Q ss_pred EE--ecCCeEEEEecCCce---------------e-eEEE-cCCCceEEeeecCCCCCEEEEecCCCe-EEEEeCCCCcE
Q 018860 203 TT--ADGSTVKFWDANHFG---------------L-VKSY-NMPCTIESASLEPKYGNKFVAGGEDMW-VRFFDFHTGNE 262 (349)
Q Consensus 203 ~~--~~d~~i~iwd~~~~~---------------~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~-i~v~d~~~~~~ 262 (349)
++ +.++.|++||+++.. + +..+ .+...+.+++|+| ++++|++|+.|++ |++||+.+++.
T Consensus 152 ~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~ 230 (355)
T 3vu4_A 152 YSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVL 230 (355)
T ss_dssp EEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCE
T ss_pred EeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcE
Confidence 43 458999999998754 1 3333 4456788999998 5899999999998 99999999999
Q ss_pred EEEec-C-CCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 263 IACNK-G-HHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 263 ~~~~~-~-h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
+..+. + |..+|.+++|+|++++|++|+.|++|++||+...
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 99887 6 9999999999999999999999999999998654
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=3.4e-29 Score=230.11 Aligned_cols=262 Identities=13% Similarity=0.105 Sum_probs=211.7
Q ss_pred ecCCCeEEEeCC--CC--CeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEe------ccCCeEEE
Q 018860 38 SKDSSPMLRNGE--TG--DWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSF------EHKHIVRA 107 (349)
Q Consensus 38 s~d~~i~iw~~~--~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~------~~~~~v~~ 107 (349)
+.++.+++|... ++ +.+..+..+.. +.+++|++++.++++++.|+.|++||+.+++....+ .|...|.+
T Consensus 96 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~ 174 (433)
T 3bws_A 96 PEELNEKLIALDKEGITHRFISRFKTGFQ-PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVET 174 (433)
T ss_dssp GGGGTTCEEECCBTTCSEEEEEEEECSSC-BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEE
T ss_pred cCCCceEEEEECCCCCcceEEEEEcCCCC-ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeE
Confidence 334434565543 34 45666666654 558999998888889999999999999999888743 36678999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCC
Q 018860 108 CSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187 (349)
Q Consensus 108 ~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 187 (349)
++|++++.++++++.|+.|++||+.+.. ....+..+...+.+++|+|++..+++++..++.|++||+++++.+..+...
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 253 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKTLA-YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI 253 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTTCC-EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCCce-EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC
Confidence 9999999999999999999999997543 234455677789999999988888888878899999999999998888877
Q ss_pred CCeeEEEEcCCCcEEEEec---------CCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCC
Q 018860 188 SPVTSAEVSQDGRYITTAD---------GSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258 (349)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 258 (349)
..+..+.++|++++++++. |+.|++||+++.+.+.....+..+..+++.|.....+++++.|+.|++||+.
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 7789999999997765432 6799999999988877776666677889988633466777999999999999
Q ss_pred CCcEEEEecCCCcceeEEEEccCCCeEEEecC---------------CCCEEEecCCCC
Q 018860 259 TGNEIACNKGHHGPVHCVRFSPGGESYASGSE---------------DGTIRIWQTGPV 302 (349)
Q Consensus 259 ~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~---------------Dg~v~vW~~~~~ 302 (349)
+++.+..+. +...+.+++|+|++++|++++. ||.|++||+...
T Consensus 334 ~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 334 EKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp TTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred CCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC
Confidence 988877765 6778999999999998887776 579999998643
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=2.8e-29 Score=231.28 Aligned_cols=231 Identities=22% Similarity=0.430 Sum_probs=193.0
Q ss_pred EeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 018860 56 TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP 134 (349)
Q Consensus 56 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~ 134 (349)
...+|...|.++.+ ++.+|++|+.|+.|++||+.+++....+. |...|.+++| ++++|++|+.|+.|++||+.+.
T Consensus 128 ~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 128 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred cccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 33467778988777 78899999999999999999999988875 8889999998 7889999999999999999765
Q ss_pred CCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceE---Eeec-CCCCeeEEEEcCCCcEE-EEecCCe
Q 018860 135 DAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIV---QTLE-TKSPVTSAEVSQDGRYI-TTADGST 209 (349)
Q Consensus 135 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~---~~~~-~~~~v~~~~~~~~~~~l-~~~~d~~ 209 (349)
. ....+..|...+.++.|.+ ..+++++.||.|++||++++... ..+. +...+.++.+ ++.++ +++.|+.
T Consensus 204 ~-~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~ 277 (435)
T 1p22_A 204 E-MLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRT 277 (435)
T ss_dssp C-EEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred c-EEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCe
Confidence 4 3455677888999999853 36778888899999999987654 3333 4567888888 45554 5567999
Q ss_pred EEEEecCCceeeEEEcC-CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEe
Q 018860 210 VKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASG 288 (349)
Q Consensus 210 i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sg 288 (349)
|++||+++..++..+.. ...+.++.+. ++++++|+.|+.|++||+.+++.+..+.+|...|.+++| ++.+|++|
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEE
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEE
Confidence 99999999988887764 3456666663 679999999999999999999999999999999999999 78899999
Q ss_pred cCCCCEEEecCCC
Q 018860 289 SEDGTIRIWQTGP 301 (349)
Q Consensus 289 s~Dg~v~vW~~~~ 301 (349)
+.||+|++||+..
T Consensus 353 ~~dg~i~vwd~~~ 365 (435)
T 1p22_A 353 AYDGKIKVWDLVA 365 (435)
T ss_dssp ETTSCEEEEEHHH
T ss_pred eCCCcEEEEECCC
Confidence 9999999999743
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-29 Score=233.07 Aligned_cols=239 Identities=11% Similarity=0.093 Sum_probs=194.5
Q ss_pred ccCCCceeeEEEeecCCCccEE-EEEecCCCeEEEeCC--CCCeEEEee--cccCCeEEEEECCCCCeeEEeeCCCeEEE
Q 018860 13 HGHSRPVVDLFYSPITPDGFFL-ISASKDSSPMLRNGE--TGDWIGTFE--GHKGAVWSCCLDTNALRAASASADFSAKV 87 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l-~s~s~d~~i~iw~~~--~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~~i~v 87 (349)
.+|.+.|.+++|+| +|++| ++++.|+++++|+.. +++.+..+. .|...|.+++|+|++.+|++|+.|+.|++
T Consensus 99 ~~~~~~v~~~~~s~---d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 99 PPIYSYIRNLRLTS---DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp -CCCCCEEEEEECT---TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CccCCceEEEEEcC---CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 47888999999997 88886 899999999999998 888888887 56788999999999999999999999999
Q ss_pred EECCCCCEEE----E-eccCCeEEEEEEcCC---CCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCe
Q 018860 88 WDALTGDVLH----S-FEHKHIVRACSFSED---THLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQT 159 (349)
Q Consensus 88 Wd~~~~~~~~----~-~~~~~~v~~~~~s~~---~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 159 (349)
|++.+++... . ..|...|++++|+|+ +++|++|+.|+.|++||+.........+.+|...|.+++|+ ++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s--d~~ 253 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG--KDY 253 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--STT
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--CCC
Confidence 9998876542 3 348889999999999 99999999999999999976544333355788999999998 666
Q ss_pred EEEEeeCCCeEEEEECCCCceEEeecC--------------------------CCCeeEEEEcCCCcEEEE-e-cCCeEE
Q 018860 160 ILSTCTDMGGVRLWDVRSGEIVQTLET--------------------------KSPVTSAEVSQDGRYITT-A-DGSTVK 211 (349)
Q Consensus 160 ~l~~~~~dg~v~vwd~~~~~~~~~~~~--------------------------~~~v~~~~~~~~~~~l~~-~-~d~~i~ 211 (349)
+|++++.|++|++||+++++++..+.. ...+..+.++|+++++++ + .++.|+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 777888889999999999998777642 235889999999988765 4 589999
Q ss_pred EEec--CCc---eeeEEEcCCCceEEeeecCCCCCEEEEecC-------CCeEEEEeCC
Q 018860 212 FWDA--NHF---GLVKSYNMPCTIESASLEPKYGNKFVAGGE-------DMWVRFFDFH 258 (349)
Q Consensus 212 iwd~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~i~v~d~~ 258 (349)
+||+ ... ..+..+..+..+..++|.| +..+++.+. ++.|++|.+.
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFPYNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECSSCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEEeccCCCCceeeccEeccCCceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEE
Confidence 9999 444 6666666667788999998 345555433 4557777654
No 120
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=8.2e-29 Score=233.91 Aligned_cols=275 Identities=12% Similarity=0.161 Sum_probs=224.2
Q ss_pred EeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEEC--CCCCEEEEecc
Q 018860 24 YSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDA--LTGDVLHSFEH 101 (349)
Q Consensus 24 fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~--~~~~~~~~~~~ 101 (349)
|+| ++.++++++.|+++.+||..+++++.++..+.. +.+++|+|++++|++++.|++|++||+ .+++++..+.+
T Consensus 145 ~~p---~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~ 220 (543)
T 1nir_A 145 LDL---PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI 220 (543)
T ss_dssp CCG---GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC
T ss_pred cCC---CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec
Confidence 665 789999999999999999999999999984333 889999999999999999999999999 88888888888
Q ss_pred CCeEEEEEEcC----CCCEEEEEe-CCCeEEEEECCCCCCCCceecc----------CCC-CeEEEEEecCCCeEEEEee
Q 018860 102 KHIVRACSFSE----DTHLLLTGG-MEKILRIFDLNRPDAPPREVDR----------SPG-SVRTVAWLHSDQTILSTCT 165 (349)
Q Consensus 102 ~~~v~~~~~s~----~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~----------~~~-~i~~~~~~~~~~~~l~~~~ 165 (349)
...++.++|+| +|+++++++ .+++|.+||..+.+. ...+.. |+. .+.++.++|.+..++++..
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~-~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP-KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE-EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc-ceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 88899999999 999999988 589999999865432 122221 222 6788999998889999998
Q ss_pred CCCeEEEEECCCCceEE--eecCCCCeeEEEEcCCCcEEE-Ee-cCCeEEEEecCCceeeEEEcCC---C--ceEEeeec
Q 018860 166 DMGGVRLWDVRSGEIVQ--TLETKSPVTSAEVSQDGRYIT-TA-DGSTVKFWDANHFGLVKSYNMP---C--TIESASLE 236 (349)
Q Consensus 166 ~dg~v~vwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~iwd~~~~~~~~~~~~~---~--~~~~~~~~ 236 (349)
.+++|.+||..+++.+. .+.....+..+.|+|+++++. ++ .+++|.+||+.+++++..+... . ....+ ++
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~ 378 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VH 378 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EE
T ss_pred CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CC
Confidence 99999999998866543 455555677899999998754 44 4789999999999888777532 1 12222 35
Q ss_pred CCCCCEEEEec-CCCeEEEEeCCC-------CcEEEEecCCCcceeEEEEccCCCeEEEec-------CCCCEEEecCCC
Q 018860 237 PKYGNKFVAGG-EDMWVRFFDFHT-------GNEIACNKGHHGPVHCVRFSPGGESYASGS-------EDGTIRIWQTGP 301 (349)
Q Consensus 237 ~~~~~~~~~~~-~d~~i~v~d~~~-------~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs-------~Dg~v~vW~~~~ 301 (349)
|..+..++++. .|++|.+||+.+ .+.++++.+|...+..++|+|++++|++++ .+++|.+||+..
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN 458 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCC
Confidence 65566677775 689999999988 888999999998999999999999999987 378999999976
Q ss_pred CCC
Q 018860 302 VTN 304 (349)
Q Consensus 302 ~~~ 304 (349)
...
T Consensus 459 ~~~ 461 (543)
T 1nir_A 459 LDA 461 (543)
T ss_dssp TTS
T ss_pred CCC
Confidence 543
No 121
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-29 Score=227.13 Aligned_cols=208 Identities=20% Similarity=0.251 Sum_probs=172.8
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC--eEEEeecccCCeEEEEECCC--CCeeEEeeCCCeE
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDTN--ALRAASASADFSA 85 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~i 85 (349)
..+.+|.++|.+++|+|. .++++|++|+.|+.|++|+..+++ .+..+.+|...|.+++|+|+ +.+|++++.|+.|
T Consensus 49 ~~~~~h~~~v~~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 49 DTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 127 (379)
T ss_dssp EEECCCSSCEEEEEECCG-GGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred eEecCCCCcEEEEEeCCC-CCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE
Confidence 456799999999999862 138899999999999999998886 77888899999999999999 9999999999999
Q ss_pred EEEECCCCCE---EEEeccCCeEEEEEEcC-------------CCCEEEEEeCCCeEEEEECCCCCCC---CceeccCCC
Q 018860 86 KVWDALTGDV---LHSFEHKHIVRACSFSE-------------DTHLLLTGGMEKILRIFDLNRPDAP---PREVDRSPG 146 (349)
Q Consensus 86 ~vWd~~~~~~---~~~~~~~~~v~~~~~s~-------------~~~~l~s~~~d~~i~lwd~~~~~~~---~~~~~~~~~ 146 (349)
++||+.++.. .....|...|.+++|+| ++.+|++++.|+.|++||+...... ...+..|..
T Consensus 128 ~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~ 207 (379)
T 3jrp_A 128 SVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD 207 (379)
T ss_dssp EEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC
Confidence 9999988732 33335888999999999 6999999999999999999754432 234567888
Q ss_pred CeEEEEEecCC--CeEEEEeeCCCeEEEEECCCCc---eEEee---cCCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCC
Q 018860 147 SVRTVAWLHSD--QTILSTCTDMGGVRLWDVRSGE---IVQTL---ETKSPVTSAEVSQDGRYITT-ADGSTVKFWDANH 217 (349)
Q Consensus 147 ~i~~~~~~~~~--~~~l~~~~~dg~v~vwd~~~~~---~~~~~---~~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~ 217 (349)
.+.+++|+|.+ +.++++++.||.|++||++++. ....+ .+...+.+++|+|++++|++ +.|+.|++||++.
T Consensus 208 ~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 208 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 99999999875 7788888889999999998864 12222 24567999999999987654 6799999999874
Q ss_pred c
Q 018860 218 F 218 (349)
Q Consensus 218 ~ 218 (349)
.
T Consensus 288 ~ 288 (379)
T 3jrp_A 288 E 288 (379)
T ss_dssp T
T ss_pred C
Confidence 3
No 122
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.8e-30 Score=227.35 Aligned_cols=229 Identities=8% Similarity=0.050 Sum_probs=177.9
Q ss_pred EECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------CCCC
Q 018860 68 CLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRP---------DAPP 138 (349)
Q Consensus 68 ~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~---------~~~~ 138 (349)
.+.+++.+|+||+.|++|++||+.+++.+..+. ...|.++.|+|. +++++.|++|++|+.... ....
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 345678899999999999999999998887776 456778888888 999999999999987521 1011
Q ss_pred ceeccCCCCeEEEEEecC-CCeEEEEeeCCCeEEEEECCCCceEEeec--CCCCeeEEEEcCCCcEEEE-ecCCeEEEEe
Q 018860 139 REVDRSPGSVRTVAWLHS-DQTILSTCTDMGGVRLWDVRSGEIVQTLE--TKSPVTSAEVSQDGRYITT-ADGSTVKFWD 214 (349)
Q Consensus 139 ~~~~~~~~~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd 214 (349)
.....|.+.|.++.|+|. ++.++++++.||+|++||+++++...... +...+.+++|+|++.++++ +.|+.|++||
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 122355578999999871 45566778888999999999998876553 3446999999999998876 5699999999
Q ss_pred cCCceee-EEEcC--CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecC---CCccee--EEEEccCCCeEE
Q 018860 215 ANHFGLV-KSYNM--PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG---HHGPVH--CVRFSPGGESYA 286 (349)
Q Consensus 215 ~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~---h~~~i~--~l~~sp~~~~l~ 286 (349)
+++...+ ..+.. ...+..++|+|. +.++++++ |+.|++||+++++.+..+.. |...+. +++|+|++++|+
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 276 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMI 276 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECTT-SSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEE
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEE
Confidence 9998876 55544 567889999984 88899998 44999999998876554433 445554 699999999999
Q ss_pred EecC-CCCEEEecCCCC
Q 018860 287 SGSE-DGTIRIWQTGPV 302 (349)
Q Consensus 287 sgs~-Dg~v~vW~~~~~ 302 (349)
+++. |+.|++|++...
T Consensus 277 ~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 277 AYSNESNSLTIYKFDKK 293 (343)
T ss_dssp EEETTTTEEEEEEECTT
T ss_pred EecCCCCcEEEEEEccc
Confidence 9998 999999987543
No 123
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=3e-29 Score=222.42 Aligned_cols=221 Identities=18% Similarity=0.232 Sum_probs=171.3
Q ss_pred EEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCC----EEEEe-ccCCeEEEEEEcC--CCCEEEEEeCCCeEE
Q 018860 55 GTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGD----VLHSF-EHKHIVRACSFSE--DTHLLLTGGMEKILR 127 (349)
Q Consensus 55 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~----~~~~~-~~~~~v~~~~~s~--~~~~l~s~~~d~~i~ 127 (349)
..+.+|++.|.+++|++++.+|++|+.|+.|++||+.++. ....+ .|...|.+++|+| ++++|++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 4568999999999999999999999999999999998763 44444 4888999999999 699999999999999
Q ss_pred EEECCCCCC--------CCceeccCCCCeEEEEEecCC-CeEEEEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCC
Q 018860 128 IFDLNRPDA--------PPREVDRSPGSVRTVAWLHSD-QTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQD 198 (349)
Q Consensus 128 lwd~~~~~~--------~~~~~~~~~~~i~~~~~~~~~-~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~ 198 (349)
+||+..... ....+..|...+.+++|+|.. +.++++++.||.|++||+++++.+..+.....+..+.+.+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 999976532 133456788899999998762 55666788889999999998775443322111111111110
Q ss_pred CcEEEEecCCeEEEEecCCceeeEEEcCCCceEEeeecCC--CCCEEEEecCCCeEEEEeCCCCcE--EEEecCCCccee
Q 018860 199 GRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK--YGNKFVAGGEDMWVRFFDFHTGNE--IACNKGHHGPVH 274 (349)
Q Consensus 199 ~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~v~d~~~~~~--~~~~~~h~~~i~ 274 (349)
.....+..+.+.|. .+..+++++.|+.+.+|+...++. +..+.+|..+|.
T Consensus 165 --------------------------~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~ 218 (351)
T 3f3f_A 165 --------------------------NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIR 218 (351)
T ss_dssp --------------------------SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEE
T ss_pred --------------------------CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCccee
Confidence 11223455666664 467899999999998888877765 667789999999
Q ss_pred EEEEccCC----CeEEEecCCCCEEEecCCC
Q 018860 275 CVRFSPGG----ESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 275 ~l~~sp~~----~~l~sgs~Dg~v~vW~~~~ 301 (349)
+++|+|++ ++|++|+.||+|++||+..
T Consensus 219 ~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 219 SISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp EEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred EEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 99999998 7999999999999999864
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=6.9e-28 Score=220.69 Aligned_cols=297 Identities=15% Similarity=0.108 Sum_probs=218.1
Q ss_pred ceeeEEEeecCCCccEEEEEe----cCC----CeEEEeC--CCCCeE--EEeecccCCeEEEEECC--------------
Q 018860 18 PVVDLFYSPITPDGFFLISAS----KDS----SPMLRNG--ETGDWI--GTFEGHKGAVWSCCLDT-------------- 71 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s----~d~----~i~iw~~--~~~~~~--~~~~~h~~~v~~~~~~~-------------- 71 (349)
.|....|++. ..+++++|+ .|| ++++||. .+++.+ ..+.+|...+..+++.+
T Consensus 64 ~~~~~~w~~~--g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 64 EVQPAAWSAL--GIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GCCHHHHHTT--TCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CcCHHHHHhc--CCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 4444555542 234677886 467 8999999 888877 56899998888777754
Q ss_pred CCCeeEEeeCC------CeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCCCCCceec
Q 018860 72 NALRAASASAD------FSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEK---ILRIFDLNRPDAPPREVD 142 (349)
Q Consensus 72 ~~~~l~s~s~D------~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~---~i~lwd~~~~~~~~~~~~ 142 (349)
.+..++.++.+ +.|++||+.++.......|...+.+++|+|+|+.|++++.++ .|++||+.+.+. ..+.
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~--~~l~ 219 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--RQVA 219 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EEEE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE--EEee
Confidence 15566666654 799999998666555556888999999999999999999875 999999976543 3455
Q ss_pred cCCCCeEEEEEecCCCeEEEEeeCCC--eEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEE-ec-CC--eEEEEecC
Q 018860 143 RSPGSVRTVAWLHSDQTILSTCTDMG--GVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITT-AD-GS--TVKFWDAN 216 (349)
Q Consensus 143 ~~~~~i~~~~~~~~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~-d~--~i~iwd~~ 216 (349)
.+...+.+++|+|++..++.+++.++ .|++||+++++......+...+..+.|+|++++|+. +. ++ .|.+||+.
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 67778999999998877776776555 499999999887544445567899999999987654 43 34 68888988
Q ss_pred CceeeEEEcCCCceEEeeecCCCCCEEEEecCC---CeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCC-
Q 018860 217 HFGLVKSYNMPCTIESASLEPKYGNKFVAGGED---MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG- 292 (349)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg- 292 (349)
+............+..++|+|+ ++++++++.+ ..|++||+.+++.. .+..|. .+.+++|+|+|++|++++.|+
T Consensus 300 ~~~~~~l~~~~~~~~~~~~spd-G~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 300 GGAPQRITWEGSQNQDADVSSD-GKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp SSCCEECCCSSSEEEEEEECTT-SSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETT
T ss_pred CCCEEEEecCCCcccCeEECCC-CCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCC
Confidence 7765443333445667889885 7888777653 68999999988774 455554 899999999999999888877
Q ss_pred --CEEEecCCCCCCCcceeee-ccCeeeeeEeChh
Q 018860 293 --TIRIWQTGPVTNDDTETLT-ANGTIGKVKVTAD 324 (349)
Q Consensus 293 --~v~vW~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 324 (349)
.|++|++.... ...+. ..+.+....+.+.
T Consensus 377 ~~~l~~~d~~g~~---~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 377 GSVLNLVSTDGRF---KARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp EEEEEEEETTSCC---EEECCCSSSEEEEEEECCC
T ss_pred ccEEEEEECCCCc---EEEeeCCCCCCcCCccccc
Confidence 79999975321 12222 2345555555554
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.4e-28 Score=214.03 Aligned_cols=195 Identities=13% Similarity=0.071 Sum_probs=144.7
Q ss_pred CCCceeeEEEeecCCC----ccEEEEEec--------------------CCCeEEEeC-CCCCeEEEeecccCCeEEEEE
Q 018860 15 HSRPVVDLFYSPITPD----GFFLISASK--------------------DSSPMLRNG-ETGDWIGTFEGHKGAVWSCCL 69 (349)
Q Consensus 15 h~~~v~~~~fs~~~~~----~~~l~s~s~--------------------d~~i~iw~~-~~~~~~~~~~~h~~~v~~~~~ 69 (349)
|...|+.++|+| + ++++++++. |+.|++|+. .+++.+.++.+|...+..++|
T Consensus 110 ~~~~v~sla~sp---d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~f 186 (356)
T 2w18_A 110 EIREIRALFCSS---DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTF 186 (356)
T ss_dssp SEEEEEEECC---------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEE
T ss_pred cccceEEEEECC---CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEe
Confidence 334555565655 6 777777653 888999987 457888888899999988999
Q ss_pred CC---CCCeeEEeeCCCeEEEEECCCCCEEEEec-cC---CeEEEEEEcCCCCEE------------EEEeCCCeEEEEE
Q 018860 70 DT---NALRAASASADFSAKVWDALTGDVLHSFE-HK---HIVRACSFSEDTHLL------------LTGGMEKILRIFD 130 (349)
Q Consensus 70 ~~---~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~---~~v~~~~~s~~~~~l------------~s~~~d~~i~lwd 130 (349)
++ ++.+|+|+|.|++|||||+.+|++++++. |. ..+.+++|+|+|.++ ++|+.|++|++||
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred eccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 88 77899999999999999999999999986 32 357788999999876 6688999999999
Q ss_pred CCCCCCCCce----eccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCC-CC-eeEEEEcCCCcEEEE
Q 018860 131 LNRPDAPPRE----VDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-SP-VTSAEVSQDGRYITT 204 (349)
Q Consensus 131 ~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-~~-v~~~~~~~~~~~l~~ 204 (349)
+.+....... ..+|...+.+..+. +.++++++.|++|+|||++++++++++..+ .. +..++|+||+++|++
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLA 343 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEE
T ss_pred CCCCEEEEEEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEE
Confidence 8754321110 12444444433332 457788888999999999999999999754 33 456899999998755
Q ss_pred -ecCCeEEEEec
Q 018860 205 -ADGSTVKFWDA 215 (349)
Q Consensus 205 -~~d~~i~iwd~ 215 (349)
+.|++|++||+
T Consensus 344 GS~D~TIklWd~ 355 (356)
T 2w18_A 344 GQKDGNIFVYHY 355 (356)
T ss_dssp ECTTSCEEEEEE
T ss_pred EECCCcEEEecC
Confidence 56999999985
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.8e-29 Score=243.82 Aligned_cols=209 Identities=19% Similarity=0.234 Sum_probs=173.3
Q ss_pred ceeeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC--eEEEeecccCCeEEEEECCC--CCeeEEeeCCCe
Q 018860 9 PLVCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDTN--ALRAASASADFS 84 (349)
Q Consensus 9 ~~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~ 84 (349)
...+.+|.++|+++.|+|. .++++|++|+.||+|++|+..++. .+..+.+|...|.+++|+|+ +.++++|+.|+.
T Consensus 46 ~~~l~~h~~~V~~l~~s~~-~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~ 124 (753)
T 3jro_A 46 IDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 124 (753)
T ss_dssp EEEECCCSSCEEEEEECCT-TSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred ceeccCCcCceEEEEecCC-CCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc
Confidence 3456899999999999872 238899999999999999998886 67888999999999999999 999999999999
Q ss_pred EEEEECCCCC---EEEEeccCCeEEEEEEcC-------------CCCEEEEEeCCCeEEEEECCCCCC---CCceeccCC
Q 018860 85 AKVWDALTGD---VLHSFEHKHIVRACSFSE-------------DTHLLLTGGMEKILRIFDLNRPDA---PPREVDRSP 145 (349)
Q Consensus 85 i~vWd~~~~~---~~~~~~~~~~v~~~~~s~-------------~~~~l~s~~~d~~i~lwd~~~~~~---~~~~~~~~~ 145 (349)
|++||+.++. ......|...|.+++|+| ++.++++|+.|+.|++||+..... ....+..|.
T Consensus 125 I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~ 204 (753)
T 3jro_A 125 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (753)
T ss_dssp EEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC
Confidence 9999998773 233345888999999999 589999999999999999976542 223456788
Q ss_pred CCeEEEEEecCC--CeEEEEeeCCCeEEEEECCCCce-----E-EeecCCCCeeEEEEcCCCcEEEE-ecCCeEEEEecC
Q 018860 146 GSVRTVAWLHSD--QTILSTCTDMGGVRLWDVRSGEI-----V-QTLETKSPVTSAEVSQDGRYITT-ADGSTVKFWDAN 216 (349)
Q Consensus 146 ~~i~~~~~~~~~--~~~l~~~~~dg~v~vwd~~~~~~-----~-~~~~~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~ 216 (349)
..|.+++|+|.+ +.++++++.||.|++||++++.. . ....+...+.+++|+|++.++++ +.|+.|++||++
T Consensus 205 ~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 205 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 999999999875 77888888899999999988631 1 11124567899999999987655 569999999998
Q ss_pred Cc
Q 018860 217 HF 218 (349)
Q Consensus 217 ~~ 218 (349)
..
T Consensus 285 ~~ 286 (753)
T 3jro_A 285 LE 286 (753)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 127
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.3e-27 Score=219.97 Aligned_cols=210 Identities=19% Similarity=0.314 Sum_probs=176.1
Q ss_pred cccceeeccCCCceeeEEEeecCCCcc-EEEEEecCCCeEEEeCCCCCe-------EEEeecccCCeEEEEECC-CCCee
Q 018860 6 IAVPLVCHGHSRPVVDLFYSPITPDGF-FLISASKDSSPMLRNGETGDW-------IGTFEGHKGAVWSCCLDT-NALRA 76 (349)
Q Consensus 6 ~~~~~~~~gh~~~v~~~~fs~~~~~~~-~l~s~s~d~~i~iw~~~~~~~-------~~~~~~h~~~v~~~~~~~-~~~~l 76 (349)
......+.+|.++|.+++|+| ++. +|++|+.||.|++|+..++.. ...+.+|...|.+++|+| ++.+|
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~---~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 247 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNP---NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLF 247 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECT---TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEE
T ss_pred CCCcEEecCCCCCeEEEEeCC---CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEE
Confidence 344566789999999999997 566 999999999999999887322 467789999999999999 67889
Q ss_pred EEeeCCCeEEEEECCCC---CEEEEe-ccCCeEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEE
Q 018860 77 ASASADFSAKVWDALTG---DVLHSF-EHKHIVRACSFSEDTH-LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTV 151 (349)
Q Consensus 77 ~s~s~D~~i~vWd~~~~---~~~~~~-~~~~~v~~~~~s~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~ 151 (349)
++++.|+.|++||+.++ ..+..+ .|...|++++|+|++. ++++|+.|+.|++||++........+..|...+.++
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE
T ss_pred EEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE
Confidence 99999999999999876 455555 5888999999999887 688999999999999987666677788899999999
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECCC--------------CceEEeecC-CCCeeEEEEcCCCc-EE-EEecCCeEEEEe
Q 018860 152 AWLHSDQTILSTCTDMGGVRLWDVRS--------------GEIVQTLET-KSPVTSAEVSQDGR-YI-TTADGSTVKFWD 214 (349)
Q Consensus 152 ~~~~~~~~~l~~~~~dg~v~vwd~~~--------------~~~~~~~~~-~~~v~~~~~~~~~~-~l-~~~~d~~i~iwd 214 (349)
.|+|.+..++++++.||.|++||++. .+.+..+.. ...+.++.|+|++. ++ +++.|+.|++|+
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 99998888888898899999999986 244444443 45799999999997 55 456799999999
Q ss_pred cCCc
Q 018860 215 ANHF 218 (349)
Q Consensus 215 ~~~~ 218 (349)
+...
T Consensus 408 ~~~~ 411 (430)
T 2xyi_A 408 MAEN 411 (430)
T ss_dssp ECHH
T ss_pred cccc
Confidence 8653
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=4e-27 Score=215.61 Aligned_cols=268 Identities=15% Similarity=0.083 Sum_probs=207.8
Q ss_pred eeeccCCCceeeEEEeec-----------CCCccEEEEEecC------CCeEEEeCCCCCeEEEeecccCCeEEEEECCC
Q 018860 10 LVCHGHSRPVVDLFYSPI-----------TPDGFFLISASKD------SSPMLRNGETGDWIGTFEGHKGAVWSCCLDTN 72 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~-----------~~~~~~l~s~s~d------~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~ 72 (349)
..+.+|...++.+++++. ...+..++.++.+ +.|++|+.. +..++.+.+|...|.+++|+|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCC
Confidence 446788888887777641 0125567777665 789999987 4556788899999999999999
Q ss_pred CCeeEEeeCCC---eEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEE-EEeCCCe--EEEEECCCCCCCCceeccCCC
Q 018860 73 ALRAASASADF---SAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLL-TGGMEKI--LRIFDLNRPDAPPREVDRSPG 146 (349)
Q Consensus 73 ~~~l~s~s~D~---~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d~~--i~lwd~~~~~~~~~~~~~~~~ 146 (349)
+++|++++.|+ .|++||+.+++......+...+.+++|+|+|+.|+ +++.++. |.+||+.+... ..+..+..
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~--~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI--RQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE--EeCcCCCC
Confidence 99999999885 99999999998877677888999999999999887 6666554 88999875432 44556777
Q ss_pred CeEEEEEecCCCeEEEEeeCCC--eEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEe-c---CCeEEEEecCCcee
Q 018860 147 SVRTVAWLHSDQTILSTCTDMG--GVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-D---GSTVKFWDANHFGL 220 (349)
Q Consensus 147 ~i~~~~~~~~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~---d~~i~iwd~~~~~~ 220 (349)
.+.++.|+|++..+++++.+++ .|.+||+.+++..........+..+.|+|++++|+.+ . +..|.+||+.+...
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 8999999988777776665555 6888899888754433344567889999999987654 3 25899999998776
Q ss_pred eEEEcCCCceEEeeecCCCCCEEEEecCCC---eEEEEeCCCCcEEEEecCCCcceeEEEEccCCC
Q 018860 221 VKSYNMPCTIESASLEPKYGNKFVAGGEDM---WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE 283 (349)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~ 283 (349)
..... ...+..++|+|+ ++.+++++.++ .|++||+. +.....+.+|.+.|.+++|+|...
T Consensus 348 ~~l~~-~~~~~~~~~spd-g~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 348 QVLSS-TFLDETPSLAPN-GTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EECCC-SSSCEEEEECTT-SSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred EEecC-CCCcCCeEEcCC-CCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 44333 336778899985 78888877766 89999987 555677889999999999999754
No 129
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1.3e-28 Score=223.94 Aligned_cols=207 Identities=11% Similarity=-0.012 Sum_probs=157.7
Q ss_pred eeeccCCCceeeEEEeecC-----CCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCC-eeEEeeCCC
Q 018860 10 LVCHGHSRPVVDLFYSPIT-----PDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL-RAASASADF 83 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~-----~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~ 83 (349)
..+.||.+.|++|+|+|.. .|+++|||||.|+++++||..++..+..+.+|..+|.+++|+|++. +|++|+.|+
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~ 209 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNG 209 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTS
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCC
Confidence 3468999999999999843 3789999999999999999988888888889999999999999874 799999999
Q ss_pred eEEEEECCCCCEEEEe--------------------------ccCCeEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCCC
Q 018860 84 SAKVWDALTGDVLHSF--------------------------EHKHIVRACSFS-EDTHLLLTGGMEKILRIFDLNRPDA 136 (349)
Q Consensus 84 ~i~vWd~~~~~~~~~~--------------------------~~~~~v~~~~~s-~~~~~l~s~~~d~~i~lwd~~~~~~ 136 (349)
+|++||+.+++..... .|...+.+++|+ |+++.|++++.|+++++||+.....
T Consensus 210 ~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 210 NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence 9999999887643321 244567788886 7999999999999999999865432
Q ss_pred CCceeccCCC-------------------CeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEee-cCCCCeeEEEEc
Q 018860 137 PPREVDRSPG-------------------SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVS 196 (349)
Q Consensus 137 ~~~~~~~~~~-------------------~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~v~~~~~~ 196 (349)
. ..+..+.. .+..+.+.+.++.++++++.||+|++||+.+++....+ .+..+|.+++|+
T Consensus 290 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafs 368 (393)
T 4gq1_A 290 Y-NEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWH 368 (393)
T ss_dssp ---------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEEC
T ss_pred C-ceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEc
Confidence 1 11111111 11222223345677888888999999999998776554 466789999999
Q ss_pred CCCcEEEEecCCeEEEEecCC
Q 018860 197 QDGRYITTADGSTVKFWDANH 217 (349)
Q Consensus 197 ~~~~~l~~~~d~~i~iwd~~~ 217 (349)
|||++|+++.++.+.+|.+..
T Consensus 369 pdG~~LA~as~~Gv~lvrL~g 389 (393)
T 4gq1_A 369 QDGSHLAIATEGSVLLTRLMG 389 (393)
T ss_dssp TTSSEEEEEESSEEEEEEEGG
T ss_pred CCCCEEEEEeCCCeEEEEEeC
Confidence 999999888888888887654
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=3.6e-26 Score=215.83 Aligned_cols=279 Identities=10% Similarity=0.044 Sum_probs=218.2
Q ss_pred eeeEEEeecCCCccEEEEEecCCCeEEEeC--CCCCeEEEeecccCCeEEEEECC----CCCeeEEee-CCCeEEEEECC
Q 018860 19 VVDLFYSPITPDGFFLISASKDSSPMLRNG--ETGDWIGTFEGHKGAVWSCCLDT----NALRAASAS-ADFSAKVWDAL 91 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~--~~~~~~~~~~~h~~~v~~~~~~~----~~~~l~s~s-~D~~i~vWd~~ 91 (349)
+..++|+| ||++|++++.|+++++||. .+++.+.++..+ .....++|+| ++++|++++ .+++|+|||..
T Consensus 181 ~~~v~~sp---dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 181 VHISRMSA---SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp EEEEEECT---TSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred cceEEECC---CCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 78889997 9999999999999999999 888889999854 4579999999 999999988 48999999999
Q ss_pred CCCEEEEecc-----------CC-eEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCC
Q 018860 92 TGDVLHSFEH-----------KH-IVRACSFSEDTH-LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQ 158 (349)
Q Consensus 92 ~~~~~~~~~~-----------~~-~v~~~~~s~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 158 (349)
+++++..+.. +. .+.++.++|++. ++++...++.|.+||+...+........+...+..+.|+|++.
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCC
Confidence 9998887752 22 688999999765 5566778999999999764432211223445577789998888
Q ss_pred eEEEEeeCCCeEEEEECCCCceEEeecCC-----CCeeEEEEcCC-CcEEEEe--cCCeEEEEecCC-------ceeeEE
Q 018860 159 TILSTCTDMGGVRLWDVRSGEIVQTLETK-----SPVTSAEVSQD-GRYITTA--DGSTVKFWDANH-------FGLVKS 223 (349)
Q Consensus 159 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-----~~v~~~~~~~~-~~~l~~~--~d~~i~iwd~~~-------~~~~~~ 223 (349)
++++++..+++|.+||+.+++++..+... ..... .++|+ +.+++++ .+++|.+||+.+ +++++.
T Consensus 337 ~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN-FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc-cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 88888877899999999999998877631 11222 24676 5555554 479999999988 788888
Q ss_pred EcCCC-ceEEeeecCCCCCEEEEec-------CCCeEEEEeCCCCcEE-EEe--------cCCCcceeEEEEccCCCeEE
Q 018860 224 YNMPC-TIESASLEPKYGNKFVAGG-------EDMWVRFFDFHTGNEI-ACN--------KGHHGPVHCVRFSPGGESYA 286 (349)
Q Consensus 224 ~~~~~-~~~~~~~~~~~~~~~~~~~-------~d~~i~v~d~~~~~~~-~~~--------~~h~~~i~~l~~sp~~~~l~ 286 (349)
+.... ....+.++|+ ++++++++ .+++|.+||+.+++.. ..+ ..+...+..++|+|+|+.|+
T Consensus 416 l~~~g~~~~~v~~~pd-g~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 494 (543)
T 1nir_A 416 LQGQGGGSLFIKTHPK-SSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVW 494 (543)
T ss_dssp EECSCSCCCCEECCTT-CCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEE
T ss_pred EEcCCCCceEEEcCCC-CCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEE
Confidence 87653 4466788885 78888876 2779999999998876 443 35678899999999999987
Q ss_pred Ee-----cCCCCEEEecCCCCC
Q 018860 287 SG-----SEDGTIRIWQTGPVT 303 (349)
Q Consensus 287 sg-----s~Dg~v~vW~~~~~~ 303 (349)
.+ +.|+.|.|||.....
T Consensus 495 ~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 495 FSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp EEEECCTTSCCEEEEEETTTTE
T ss_pred EEeecCCCCCCeEEEEECCCce
Confidence 44 358999999986553
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=4.3e-25 Score=195.44 Aligned_cols=268 Identities=7% Similarity=0.068 Sum_probs=200.1
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeC-CCeEEEEECCCCCE-EEEeccCCeEEE
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASA-DFSAKVWDALTGDV-LHSFEHKHIVRA 107 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~vWd~~~~~~-~~~~~~~~~v~~ 107 (349)
.+..+++++.++.+.+||..+++.+..+..+...+ .++|+++++++++++. ++.|.+||..+++. ...+........
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA 87 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence 34557888899999999999999988888777777 9999999997766665 89999999999886 666654444444
Q ss_pred -EEEcCCCCEEEEEeCCC---eEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCe-EEEEECCCCceE-
Q 018860 108 -CSFSEDTHLLLTGGMEK---ILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGG-VRLWDVRSGEIV- 181 (349)
Q Consensus 108 -~~~s~~~~~l~s~~~d~---~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~- 181 (349)
++|+|++++++++..++ .|.+||+...+. ...+ ........++|+|++..+++++..++. |.+|++.....+
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~-~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF-ISTI-PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEE-EEEE-ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCe-EEEE-ECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 99999999999555553 899999875432 2222 234457899999988778877777678 999998753322
Q ss_pred ----EeecCCCCeeEEEEcCCCcEE-EEe-cCCeEEEEecCCcee---eEEEcCCCceEEeeecCCCCCEEE-EecCCCe
Q 018860 182 ----QTLETKSPVTSAEVSQDGRYI-TTA-DGSTVKFWDANHFGL---VKSYNMPCTIESASLEPKYGNKFV-AGGEDMW 251 (349)
Q Consensus 182 ----~~~~~~~~v~~~~~~~~~~~l-~~~-~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~ 251 (349)
..+........+.++|+++++ +++ .++.|.+||+.+.+. +..+.....+..++++|+ +++++ +...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~ 244 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRD-GSTVYVLTESTVD 244 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTT-SSEEEEECSSEEE
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCC-CCEEEEEEcCCCE
Confidence 223344567899999999854 444 478999999998887 777776666778889985 66554 4556889
Q ss_pred EEEEeCCCCcE--EEEecCC----Ccc---eeEEEEccCCCeEE-EecCCCCEEEecCCC
Q 018860 252 VRFFDFHTGNE--IACNKGH----HGP---VHCVRFSPGGESYA-SGSEDGTIRIWQTGP 301 (349)
Q Consensus 252 i~v~d~~~~~~--~~~~~~h----~~~---i~~l~~sp~~~~l~-sgs~Dg~v~vW~~~~ 301 (349)
|.+||+.+++. +..+..+ ..+ ...++|+|++++|+ ++..++.|++|++..
T Consensus 245 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 245 VFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp EEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred EEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 99999998877 3333222 222 24589999999875 555677999999864
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=3.5e-24 Score=189.96 Aligned_cols=265 Identities=11% Similarity=0.150 Sum_probs=185.6
Q ss_pred EEEEEecCCCeEEEeCC-CCC--eEEEeecccCCeEEEEECCCCCeeEEeeCC-CeEEEEECC--CCCE--EEEeccCCe
Q 018860 33 FLISASKDSSPMLRNGE-TGD--WIGTFEGHKGAVWSCCLDTNALRAASASAD-FSAKVWDAL--TGDV--LHSFEHKHI 104 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~-~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D-~~i~vWd~~--~~~~--~~~~~~~~~ 104 (349)
.+++++.|+.+++|+.. +++ .+..+ .|...+.+++|+|++++|++++.+ +.|++|++. +++. +..+.....
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCC
Confidence 34444789999999875 343 23333 467788999999999999988886 999999987 5553 344544457
Q ss_pred EEEEEEcCCCCEEEEEe-CCCeEEEEECCCCCC-CCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCC-CceE
Q 018860 105 VRACSFSEDTHLLLTGG-MEKILRIFDLNRPDA-PPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS-GEIV 181 (349)
Q Consensus 105 v~~~~~s~~~~~l~s~~-~d~~i~lwd~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~ 181 (349)
+..++|+|++++|++++ .++.|.+||+..... ...........+..++|+|++..+++++..++.|++||+.+ ++..
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 88999999999887666 488999999841110 01111123345778899988777777765679999999987 6543
Q ss_pred E----ee--cCCCCeeEEEEcCCCcEE-EEe-cCCeEEEEecCC--cee--eEEEc-CC------CceEEeeecCCCCCE
Q 018860 182 Q----TL--ETKSPVTSAEVSQDGRYI-TTA-DGSTVKFWDANH--FGL--VKSYN-MP------CTIESASLEPKYGNK 242 (349)
Q Consensus 182 ~----~~--~~~~~v~~~~~~~~~~~l-~~~-~d~~i~iwd~~~--~~~--~~~~~-~~------~~~~~~~~~~~~~~~ 242 (349)
. .+ .....+..+.|+|+++++ +++ .++.|.+||+.. ... ..... .+ ..+..++|+|. +++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d-g~~ 244 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD-GRH 244 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT-SSE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC-CCE
Confidence 2 12 233467889999999865 444 578999999953 322 22222 11 13446888885 555
Q ss_pred EE-EecCCCeEEEEeCC--CC--cEEEEecCCCcceeEEEEccCCCeEEEec-CCCCEEEecCC
Q 018860 243 FV-AGGEDMWVRFFDFH--TG--NEIACNKGHHGPVHCVRFSPGGESYASGS-EDGTIRIWQTG 300 (349)
Q Consensus 243 ~~-~~~~d~~i~v~d~~--~~--~~~~~~~~h~~~i~~l~~sp~~~~l~sgs-~Dg~v~vW~~~ 300 (349)
++ ++..++.|++||+. ++ +.+..+..+.. +.+++|+|++++|++++ .|+.|.+|+++
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 55 66689999999998 33 34444554444 88999999999887776 68999999654
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=8.5e-25 Score=189.40 Aligned_cols=253 Identities=15% Similarity=0.079 Sum_probs=188.4
Q ss_pred EEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCC-CCEEEEec-c-CCeEEEEEEcC
Q 018860 36 SASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT-GDVLHSFE-H-KHIVRACSFSE 112 (349)
Q Consensus 36 s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~-~~~~~~~~-~-~~~v~~~~~s~ 112 (349)
+++.|+++.+|+..+++.. .+..|...|.+++|+|++++|++++ ++.|++||+.+ ++...... + ...+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 4567889999999887755 5666899999999999999999987 88999999998 87766654 2 36788999999
Q ss_pred CCCEEEEEe--CCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC--CCCceEEeecCCC
Q 018860 113 DTHLLLTGG--MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV--RSGEIVQTLETKS 188 (349)
Q Consensus 113 ~~~~l~s~~--~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~--~~~~~~~~~~~~~ 188 (349)
++++|++++ .++..++|.++........+.. ...+..+.|+|++..++.++..++.+++|++ .+++......+..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 999999998 4456677666433332333333 3348888999888878777777899999985 4455444444556
Q ss_pred CeeEEEEcCCCcEEE-Ee-cCCeEEEEecC-CceeeEEEc-CCCceEEeeecCCCCCEEEEecCC-----------CeEE
Q 018860 189 PVTSAEVSQDGRYIT-TA-DGSTVKFWDAN-HFGLVKSYN-MPCTIESASLEPKYGNKFVAGGED-----------MWVR 253 (349)
Q Consensus 189 ~v~~~~~~~~~~~l~-~~-~d~~i~iwd~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d-----------~~i~ 253 (349)
.+..+.|+|++++++ ++ .++.+++|++. .......+. ....+..+.|+|. ++++++++.+ ..|+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPS-GDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTT-SSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCC-CCEEEEEEcCCCCCcccccCceEEE
Confidence 789999999998765 44 47889999875 333333333 2334567888884 7788777654 5799
Q ss_pred EEeCCCCcE--EEEecCCCcceeEEEEccCCCeEEEecCCC
Q 018860 254 FFDFHTGNE--IACNKGHHGPVHCVRFSPGGESYASGSEDG 292 (349)
Q Consensus 254 v~d~~~~~~--~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg 292 (349)
+||+.+++. +..+.+|...+.+++|+|++++|++++.|.
T Consensus 253 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 253 LMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 999988765 344457888999999999999998877654
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=8.1e-25 Score=214.55 Aligned_cols=276 Identities=9% Similarity=-0.015 Sum_probs=207.8
Q ss_pred CCceeeEEEeecCCCccEEEEEec-CC-----CeEEEeCCCCCeEEEeecccCC------------------------eE
Q 018860 16 SRPVVDLFYSPITPDGFFLISASK-DS-----SPMLRNGETGDWIGTFEGHKGA------------------------VW 65 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~-d~-----~i~iw~~~~~~~~~~~~~h~~~------------------------v~ 65 (349)
...|.+++||| ||++|++++. |+ .|.+|+..+++....+..|... |.
T Consensus 36 ~~~~~~~~~Sp---dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAP---DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECT---TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEec---CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 45688999997 9999999998 88 8999999999888777766543 78
Q ss_pred EEEECCCCCeeEEeeCCCeEEEEECCCC---CEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceec
Q 018860 66 SCCLDTNALRAASASADFSAKVWDALTG---DVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVD 142 (349)
Q Consensus 66 ~~~~~~~~~~l~s~s~D~~i~vWd~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 142 (349)
+++|+||+++|++++. +.|++||+.++ +......+...+..++|+|||++|+.++. +.|.+||+...... ....
T Consensus 113 ~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~-~~~~ 189 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQM-QLTA 189 (741)
T ss_dssp CCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEE-ECCC
T ss_pred eeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEE-Eecc
Confidence 9999999999999886 89999999988 65555557778999999999999998874 58999998753321 1111
Q ss_pred cCCCC----------------eEEEEEecCCCeEEEEeeCCC--------------------------------eEEEEE
Q 018860 143 RSPGS----------------VRTVAWLHSDQTILSTCTDMG--------------------------------GVRLWD 174 (349)
Q Consensus 143 ~~~~~----------------i~~~~~~~~~~~~l~~~~~dg--------------------------------~v~vwd 174 (349)
.+... +..+.|+|++..++.+..+.+ .|++||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 11111 467899988777776654432 789999
Q ss_pred CCC-CceEEeec---CCCCeeEEEEcCCCcEEEEe-c-----CCeEEEEecCCceeeEEEcCCC-----ceEEeeecCCC
Q 018860 175 VRS-GEIVQTLE---TKSPVTSAEVSQDGRYITTA-D-----GSTVKFWDANHFGLVKSYNMPC-----TIESASLEPKY 239 (349)
Q Consensus 175 ~~~-~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~-----d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~ 239 (349)
+.+ ++...... +...+..+.| |||+.|+.+ . +..|.+||+.++.....+.... .+..+.|+|+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd- 347 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD- 347 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT-
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC-
Confidence 988 87654332 3346789999 999987643 1 4579999999887666554322 2346788885
Q ss_pred CCEEEEecCCCeEEEEeCC-CCcEEEEecCCCcceeEE-EEccCCCeEE-EecCCC--CEEEecCC
Q 018860 240 GNKFVAGGEDMWVRFFDFH-TGNEIACNKGHHGPVHCV-RFSPGGESYA-SGSEDG--TIRIWQTG 300 (349)
Q Consensus 240 ~~~~~~~~~d~~i~v~d~~-~~~~~~~~~~h~~~i~~l-~~sp~~~~l~-sgs~Dg--~v~vW~~~ 300 (349)
++.+++++.|+.+++|.+. .++ ...+..|...|.++ +|+|+++.|+ +++.|+ .++||++.
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 6788888889877777664 344 67778888888887 5999998775 566666 89999864
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=4.2e-24 Score=189.02 Aligned_cols=262 Identities=13% Similarity=0.121 Sum_probs=196.3
Q ss_pred cEEEEEecCCCeEEEeCCCCCeEEEeeccc-C-CeEEEEECCCCCee-EEeeCCCeEEEEECCCCCEEEEeccCC-----
Q 018860 32 FFLISASKDSSPMLRNGETGDWIGTFEGHK-G-AVWSCCLDTNALRA-ASASADFSAKVWDALTGDVLHSFEHKH----- 103 (349)
Q Consensus 32 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~-~-~v~~~~~~~~~~~l-~s~s~D~~i~vWd~~~~~~~~~~~~~~----- 103 (349)
++|++++.++.+.+||..+++.+..+.... . .+..++|+|+++++ ++++.++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 478999999999999999999888887433 2 47789999999765 566678999999999999887776433
Q ss_pred -eEEEEEEcCCCCEEEEEe------------CCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 018860 104 -IVRACSFSEDTHLLLTGG------------MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 104 -~v~~~~~s~~~~~l~s~~------------~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
.+..++|+|+++++++++ .++.|.+||+.+.+. ...+. ....+..+.|+|++..++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~---~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR-RKAFE-APRQITMLAWARDGSKLYGL---GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE-EEEEE-CCSSCCCEEECTTSSCEEEE---SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE-EEEEe-CCCCcceeEECCCCCEEEEe---CCeE
Confidence 567899999999988886 579999999865332 12222 23456778888877766655 4789
Q ss_pred EEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEec--CC-----------------------eEEEEecCCceeeEE--
Q 018860 171 RLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTAD--GS-----------------------TVKFWDANHFGLVKS-- 223 (349)
Q Consensus 171 ~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--d~-----------------------~i~iwd~~~~~~~~~-- 223 (349)
.+||+.+++....+........+.++|+++.+..+. ++ .|.+||+.+.+....
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 236 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeec
Confidence 999999998887765433112236788887553322 22 468999988766411
Q ss_pred EcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 224 YNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
......+..++++|. +++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++.++.|++||+...
T Consensus 237 ~~~~~~~~~~~~s~d-g~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 237 RIMDVFYFSTAVNPA-KTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EECSSCEEEEEECTT-SSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred CCCCCceeeEEECCC-CCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 122334567888884 7777777 799999999999887776543 46789999999999998899999999998644
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=9.2e-23 Score=181.75 Aligned_cols=268 Identities=11% Similarity=0.098 Sum_probs=203.4
Q ss_pred CCceeeEEEeecCCCccEEEEEec-------CCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCee-EEeeCCCeEEE
Q 018860 16 SRPVVDLFYSPITPDGFFLISASK-------DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRA-ASASADFSAKV 87 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~-------d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~v 87 (349)
...+..++|+| +|++|++++. ++.+.+||..+++.+..+.... .+..++|+++++++ ++...++.|.+
T Consensus 40 ~~~~~~~~~s~---dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 40 GKGAYEMAYSQ---QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp ESSEEEEEEET---TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred ccCccceEECC---CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCCCEEEE
Confidence 34567889997 8888888874 4579999999999888887543 46789999999855 45566899999
Q ss_pred EECCCCCEEEEeccCC----------eEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCCCCCceeccCCCCeEEEEEec
Q 018860 88 WDALTGDVLHSFEHKH----------IVRACSFSEDTHLLLTGG--MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH 155 (349)
Q Consensus 88 Wd~~~~~~~~~~~~~~----------~v~~~~~s~~~~~l~s~~--~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~ 155 (349)
||..+++.+..+.... .+..++|+|+++++++++ .++.|.+||+.+.+. ...+..+...+..+.|+|
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL-KTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE-EEEECCCCTTCCCCEEET
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce-EEEecCCCCccceEEECC
Confidence 9999999887776322 278899999999877765 478899999875432 222222334467788888
Q ss_pred CCCeEEEEeeCCCeEEEEECCCCceEEeecC-----CCCeeEEEEcCCCcEEEE-e-cCCeEEEEecCCceeeEEEcCCC
Q 018860 156 SDQTILSTCTDMGGVRLWDVRSGEIVQTLET-----KSPVTSAEVSQDGRYITT-A-DGSTVKFWDANHFGLVKSYNMPC 228 (349)
Q Consensus 156 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~-~-~d~~i~iwd~~~~~~~~~~~~~~ 228 (349)
++..++++. .++.|.+||+.+++....+.. ...+..+.++|+++++.. . .++.|.+||+.+.+.+..+....
T Consensus 195 dg~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 273 (353)
T 3vgz_A 195 EGKRLYTTN-ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE 273 (353)
T ss_dssp TTTEEEEEC-TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred CCCEEEEEc-CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 777666554 469999999999988877654 234677999999986544 3 35899999999988887777654
Q ss_pred ceEEeeecCCCCC-EEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCC
Q 018860 229 TIESASLEPKYGN-KFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG 292 (349)
Q Consensus 229 ~~~~~~~~~~~~~-~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg 292 (349)
. ..++++|. ++ .+++...++.|.+||..+++.+..+... ..+.+++|+|++++|+.+..++
T Consensus 274 ~-~~~~~s~d-g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 274 S-LAVLFNPA-RNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp C-CCEEEETT-TTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred C-ceEEECCC-CCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence 3 45788885 55 5556668999999999999988777654 4679999999999776655554
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.4e-24 Score=209.47 Aligned_cols=276 Identities=11% Similarity=0.001 Sum_probs=196.1
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccC---CeEEEEECCCCCeeEEeeCC---------CeE
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDTNALRAASASAD---------FSA 85 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~s~D---------~~i 85 (349)
.+.+++|+| ||+++++ +.|+++++|+..+++....+.+|.. .|.+++|+|||++|++++.+ +.|
T Consensus 18 ~~~~~~~sp---dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWIS---DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSS---SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcC---CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 367888987 8997766 7899999999999998888888875 49999999999999999875 788
Q ss_pred EEEECCCCCEEEEec---cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCC----------------
Q 018860 86 KVWDALTGDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG---------------- 146 (349)
Q Consensus 86 ~vWd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~---------------- 146 (349)
++||+.+++...... +...+..++|||||+.|+.++. +.|++||+..... ......+..
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce-EEEecCCCCCceECcccceeEEEEe
Confidence 899999887632222 3334888999999999999886 7899999876432 222222222
Q ss_pred --CeEEEEEecCCCeEEEEeeCC---------------------------------CeEEEEECCCCceEEeecC-----
Q 018860 147 --SVRTVAWLHSDQTILSTCTDM---------------------------------GGVRLWDVRSGEIVQTLET----- 186 (349)
Q Consensus 147 --~i~~~~~~~~~~~~l~~~~~d---------------------------------g~v~vwd~~~~~~~~~~~~----- 186 (349)
.+.++.|+|++..++.+..++ ..|++||+.+++....+..
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 237899998877776655432 2799999998876445543
Q ss_pred --CCCeeEEEEcCCCcEEEEe-c----CCeEEEEecCCceeeEEEcCC--Cce----EEeeecCCCCCEEEE--ecCCC-
Q 018860 187 --KSPVTSAEVSQDGRYITTA-D----GSTVKFWDANHFGLVKSYNMP--CTI----ESASLEPKYGNKFVA--GGEDM- 250 (349)
Q Consensus 187 --~~~v~~~~~~~~~~~l~~~-~----d~~i~iwd~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~--~~~d~- 250 (349)
...+..+.|+|||++++.. . +..|.+||+.++++...+... ..+ ..+.|+|+ ++.++. ...++
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD-GRKFFFIRAIPQGG 330 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTT-SCSEEEEEEECCSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCC-CCeEEEEEecccCC
Confidence 2357889999999987543 2 257999999888766544221 111 26788885 554443 45666
Q ss_pred -----eEEEEeC-CCCcE--EEEecCCCcceeE-EEEccCCCeEEEecCC---CCEEEecCC
Q 018860 251 -----WVRFFDF-HTGNE--IACNKGHHGPVHC-VRFSPGGESYASGSED---GTIRIWQTG 300 (349)
Q Consensus 251 -----~i~v~d~-~~~~~--~~~~~~h~~~i~~-l~~sp~~~~l~sgs~D---g~v~vW~~~ 300 (349)
.|++||. ..++. ...+..+...+.. ++|+|+++.|+..+.+ +.++||++.
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 5777773 44431 4445444444554 6999999998755544 789999875
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=1.3e-23 Score=205.98 Aligned_cols=274 Identities=11% Similarity=0.093 Sum_probs=197.0
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC--eEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCE
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDV 95 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~ 95 (349)
.|.+++||| ||++|++++. +.+.+|+..++. .+..+..|...+.+++|+|||++|+.++ ++.|++||+.+++.
T Consensus 110 ~v~~~~~Sp---Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSP---DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECT---TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE
T ss_pred CcceeEECC---CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE
Confidence 478899997 9999999886 999999998873 4556778888999999999999999888 46899999998876
Q ss_pred EEEeccC-Ce----------------EEEEEEcCCCCEEEEEeCCC---------------------------------e
Q 018860 96 LHSFEHK-HI----------------VRACSFSEDTHLLLTGGMEK---------------------------------I 125 (349)
Q Consensus 96 ~~~~~~~-~~----------------v~~~~~s~~~~~l~s~~~d~---------------------------------~ 125 (349)
....... .. +..++|+|||++|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 6554322 21 47799999999999988765 7
Q ss_pred EEEEECCC-CCCCCceec-cCCCCeEEEEEecCCCeEEEEee----CCCeEEEEECCCCceEEeecCCC-----CeeEEE
Q 018860 126 LRIFDLNR-PDAPPREVD-RSPGSVRTVAWLHSDQTILSTCT----DMGGVRLWDVRSGEIVQTLETKS-----PVTSAE 194 (349)
Q Consensus 126 i~lwd~~~-~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~----~dg~v~vwd~~~~~~~~~~~~~~-----~v~~~~ 194 (349)
|.+||+.+ ......... .+...+..++| |++..+++++. .+..|++||+.+++....+.... .+..+.
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 88889865 432111111 35567889999 88877776654 34689999999998766654322 345789
Q ss_pred EcCCCcEEEEe-cCCeEEEEecC-CceeeEEEcC-CCceEEe-eecCCCCCEE-EEecCCC--eEEEEeCCC-CcEEEEe
Q 018860 195 VSQDGRYITTA-DGSTVKFWDAN-HFGLVKSYNM-PCTIESA-SLEPKYGNKF-VAGGEDM--WVRFFDFHT-GNEIACN 266 (349)
Q Consensus 195 ~~~~~~~l~~~-~d~~i~iwd~~-~~~~~~~~~~-~~~~~~~-~~~~~~~~~~-~~~~~d~--~i~v~d~~~-~~~~~~~ 266 (349)
|+||++++.++ .++.+++|.+. ... ...+.. ...+..+ .|+|+ ++.+ ++++.++ .+++|++.. +.....+
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~d-g~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEK-AGLAYFRAGIESARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETT-TTEEEEEECSSCTTCBEEEEEETTCCCCEEC
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCC-CCEEEEEEeCCCCceEEEEEEEcCCCCeeec
Confidence 99999977665 47777777654 223 333332 3344455 58875 5555 4555565 899998864 5545556
Q ss_pred cCCCcceeEEEEccCCCeEEEecCC----CCEEEecCC
Q 018860 267 KGHHGPVHCVRFSPGGESYASGSED----GTIRIWQTG 300 (349)
Q Consensus 267 ~~h~~~i~~l~~sp~~~~l~sgs~D----g~v~vW~~~ 300 (349)
.. ...+.+++|||++++|+....+ ..+.+|+..
T Consensus 422 ~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 422 SK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp CC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred cc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 55 5678899999999988754333 457888753
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=4.5e-22 Score=175.98 Aligned_cols=243 Identities=10% Similarity=0.039 Sum_probs=183.8
Q ss_pred cCCCceeeEEEeecCCCccEEEEEec-CCCeEEEeCCCCCe-EEEeecccCCeEEEEECCCCCeeEEeeCCC---eEEEE
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASK-DSSPMLRNGETGDW-IGTFEGHKGAVWSCCLDTNALRAASASADF---SAKVW 88 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~-d~~i~iw~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---~i~vW 88 (349)
.+..++ .++|+| +|++|++++. ++.+.+|+..+++. ...+..+..+..+++|+|++++|+++..++ .|++|
T Consensus 38 ~~~~~~-~~~~s~---dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 38 LGYDFV-DTAITS---DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp CCCCEE-EEEECS---SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEE
T ss_pred ccCCcc-eEEEcC---CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEE
Confidence 455566 899987 8887776666 88999999999988 888888887777699999999999655553 89999
Q ss_pred ECCCCCEEEEeccCCeEEEEEEcCCCCEEEEE-eCCCe-EEEEECCCCCCCC---ceeccCCCCeEEEEEecCCCeEEEE
Q 018860 89 DALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-GMEKI-LRIFDLNRPDAPP---REVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 89 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~d~~-i~lwd~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
|+.+++.+..+........++|+|+|++++++ ..++. +.+|++....... ............++|+|++..++++
T Consensus 114 d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 114 SFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp ETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred ECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 99999988888777778999999999865554 56678 9999987533211 1111233457889999888778888
Q ss_pred eeCCCeEEEEECCCCce---EEeecCCCCeeEEEEcCCCcEEEEe--cCCeEEEEecCCcee--eEEEcCC----Cc---
Q 018860 164 CTDMGGVRLWDVRSGEI---VQTLETKSPVTSAEVSQDGRYITTA--DGSTVKFWDANHFGL--VKSYNMP----CT--- 229 (349)
Q Consensus 164 ~~~dg~v~vwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~iwd~~~~~~--~~~~~~~----~~--- 229 (349)
+..++.|++||+.+++. +..+.....+..+.++|+++++..+ .++.|.+||+.+++. +..+... ..
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 273 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLF 273 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGT
T ss_pred eCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcc
Confidence 87789999999999888 7777776777889999999966443 367899999988776 3332221 11
Q ss_pred -eEEeeecCCCCCEE-EEecCCCeEEEEeCCCCc
Q 018860 230 -IESASLEPKYGNKF-VAGGEDMWVRFFDFHTGN 261 (349)
Q Consensus 230 -~~~~~~~~~~~~~~-~~~~~d~~i~v~d~~~~~ 261 (349)
...++|+|+ ++++ +++..++.|++||+....
T Consensus 274 ~~~~~~~spd-g~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 274 GANQMALNKT-ETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp TCCCEEECTT-SSEEEEEETTTTEEEEEETTSCE
T ss_pred cccceEECCC-CCEEEEecCCCCcEEEEEecCCc
Confidence 123688885 5655 556677899999997644
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=1.8e-22 Score=178.95 Aligned_cols=264 Identities=14% Similarity=0.119 Sum_probs=187.0
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecC-CCeEEEeCC--CCC--eEEEeecccCCeEEEEECCCCCeeEEeeC-CCeEEE
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKD-SSPMLRNGE--TGD--WIGTFEGHKGAVWSCCLDTNALRAASASA-DFSAKV 87 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d-~~i~iw~~~--~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~i~v 87 (349)
.|...+.+++|+| +|++|++++.+ +.+.+|+.. +++ .+..+..+. .+..++|++++++|++++. ++.|++
T Consensus 35 ~~~~~~~~~~~sp---dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 35 DVPGQVQPMVVSP---DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp ECSSCCCCEEECT---TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred ecCCCCceEEECC---CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 5777889999997 89999988887 899999986 555 345565554 7889999999998876664 899999
Q ss_pred EECC---CCCEEEEeccCCeEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCCCCCc----eec-cCCCCeEEEEEecCCC
Q 018860 88 WDAL---TGDVLHSFEHKHIVRACSFSEDTHLLLTGG-MEKILRIFDLNRPDAPPR----EVD-RSPGSVRTVAWLHSDQ 158 (349)
Q Consensus 88 Wd~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d~~i~lwd~~~~~~~~~----~~~-~~~~~i~~~~~~~~~~ 158 (349)
||+. .++....+.....+.+++|+|+++++++++ .++.|++||+........ ... .....+..++|+|++.
T Consensus 111 ~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSS
T ss_pred EECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCC
Confidence 9994 334555555556688999999999888877 899999999975222111 111 2234678899998887
Q ss_pred eEEEEeeCCCeEEEEECCC--Cce--EEeec---C----CCCeeEEEEcCCCcEEE-Ee-cCCeEEEEecC----Cceee
Q 018860 159 TILSTCTDMGGVRLWDVRS--GEI--VQTLE---T----KSPVTSAEVSQDGRYIT-TA-DGSTVKFWDAN----HFGLV 221 (349)
Q Consensus 159 ~~l~~~~~dg~v~vwd~~~--~~~--~~~~~---~----~~~v~~~~~~~~~~~l~-~~-~d~~i~iwd~~----~~~~~ 221 (349)
.+++++..++.|++||+.. ++. ...+. . ...+..+.|+|++++|. +. .++.|.+||+. ....+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 7877777789999999953 433 22221 1 12456799999998765 33 47999999998 34455
Q ss_pred EEEcCCCceEEeeecCCCCCEEEEec-CCCeEEEEe--CCCCcE--EEEecCCCcceeEEEEccCCC
Q 018860 222 KSYNMPCTIESASLEPKYGNKFVAGG-EDMWVRFFD--FHTGNE--IACNKGHHGPVHCVRFSPGGE 283 (349)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~v~d--~~~~~~--~~~~~~h~~~i~~l~~sp~~~ 283 (349)
..+.....+..++|+|. ++++++++ .++.|++|+ ..+++. +..+... ....+++|.|+.+
T Consensus 271 ~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 271 GFQPTETQPRGFNVDHS-GKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp EEEECSSSCCCEEECTT-SSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred eeecCCCccceEEECCC-CCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccC
Confidence 55554445677888885 67666665 789999994 445543 3334332 3456788877643
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=8.7e-23 Score=199.10 Aligned_cols=276 Identities=11% Similarity=0.109 Sum_probs=193.3
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCC----
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT---- 92 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~---- 92 (349)
.+|.+++||| | ++++.+ .|+.+.+|+..+++.. .+..|...+.+++|+||+++|+++ .|+.|++|++.+
T Consensus 82 ~~v~~~~~sp---d-~~~~~~-~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAG---R-GLVVLF-TQGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETT---T-TEEEEE-ETTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSC
T ss_pred cCceeEEECC---C-CeEEEE-ECCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccccc
Confidence 5689999997 6 455544 5699999999887654 445567778899999999999985 689999999998
Q ss_pred -CCEEEEeccC-Ce--------------EEEEEEcCCCCEEEEEe---------------------------------CC
Q 018860 93 -GDVLHSFEHK-HI--------------VRACSFSEDTHLLLTGG---------------------------------ME 123 (349)
Q Consensus 93 -~~~~~~~~~~-~~--------------v~~~~~s~~~~~l~s~~---------------------------------~d 123 (349)
++........ .. +.+++|+|||++|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 7766544322 22 47899999999999987 44
Q ss_pred CeEEEEECCCCCCCCcee-ccCCCCeEEEEEecCCCeEEEEeeCC----CeEEEEECCCCceEEee-c--CC---CCeeE
Q 018860 124 KILRIFDLNRPDAPPREV-DRSPGSVRTVAWLHSDQTILSTCTDM----GGVRLWDVRSGEIVQTL-E--TK---SPVTS 192 (349)
Q Consensus 124 ~~i~lwd~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~d----g~v~vwd~~~~~~~~~~-~--~~---~~v~~ 192 (349)
..|.+||+.+........ ..+...+..+.|+|++..+++++.+. ..|++||+.+++....+ . .. ..+..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 679999987543211111 23456688999998777666655442 38999999998333322 1 11 12466
Q ss_pred EEEcC--CCcEEEEe-cCCeEEEEecC-CceeeEEEcCC-CceEE-eeecCCCCCEEE-EecCCC----eEEEEeCCCCc
Q 018860 193 AEVSQ--DGRYITTA-DGSTVKFWDAN-HFGLVKSYNMP-CTIES-ASLEPKYGNKFV-AGGEDM----WVRFFDFHTGN 261 (349)
Q Consensus 193 ~~~~~--~~~~l~~~-~d~~i~iwd~~-~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~-~~~~d~----~i~v~d~~~~~ 261 (349)
+.|+| +++++.++ .++.+++|++. ....++.+... ..+.. ++|+|+ ++.++ ++..++ .|..||+.+++
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spd-g~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPK-GTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTT-SSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCC-CCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 89999 99987765 47888888775 44444444332 23444 688885 55554 555554 78888887765
Q ss_pred EEEEecCCCcceeEEEEccCCCeEEEecCC----CCEEEecCCCC
Q 018860 262 EIACNKGHHGPVHCVRFSPGGESYASGSED----GTIRIWQTGPV 302 (349)
Q Consensus 262 ~~~~~~~h~~~i~~l~~sp~~~~l~sgs~D----g~v~vW~~~~~ 302 (349)
...+. |...+.+++|||++++|+..+.+ +.|++||+...
T Consensus 394 -~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 394 -TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp -CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred -ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 33333 66779999999999988765433 46999997643
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=2.3e-22 Score=178.83 Aligned_cols=259 Identities=10% Similarity=0.044 Sum_probs=185.0
Q ss_pred CCccEEEEEecCCCeEEEeCCCCCeEEEeeccc-CCeEEEEECCCCCee-EEeeCCCeEEEEECCCCCEEEEeccC----
Q 018860 29 PDGFFLISASKDSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDTNALRA-ASASADFSAKVWDALTGDVLHSFEHK---- 102 (349)
Q Consensus 29 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l-~s~s~D~~i~vWd~~~~~~~~~~~~~---- 102 (349)
+++.++++++.++.+.+||..+++.++.+..+. ..+..++|+++++++ ++++.++.|.+||+.+++.+..+...
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 378899999999999999999999988887654 246789999999865 45667999999999999887766532
Q ss_pred ---CeEEEEEEcCCCCEEEEEeCC------------CeEEEEECCCCCCC-CceeccCCCCeEEEEEecCCCeEEEEeeC
Q 018860 103 ---HIVRACSFSEDTHLLLTGGME------------KILRIFDLNRPDAP-PREVDRSPGSVRTVAWLHSDQTILSTCTD 166 (349)
Q Consensus 103 ---~~v~~~~~s~~~~~l~s~~~d------------~~i~lwd~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 166 (349)
..+..++|+|+|+++++++.+ +.|.+||+.+.... ......++..+.+++|+|++. ++++ +
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~-~- 165 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA-G- 165 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE-S-
T ss_pred cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEc-c-
Confidence 236789999999999998865 89999998753211 112223344677888988776 5553 3
Q ss_pred CCeEEEEECCCCceEEeecCCC-------------------------CeeEEEEcCCCcE-----------EEE-ecCCe
Q 018860 167 MGGVRLWDVRSGEIVQTLETKS-------------------------PVTSAEVSQDGRY-----------ITT-ADGST 209 (349)
Q Consensus 167 dg~v~vwd~~~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~-----------l~~-~~d~~ 209 (349)
+.|.+||+.+++....+.... ....+.+++++.. +.. ..++.
T Consensus 166 -~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 166 -PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp -SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred -CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence 349999999998877665432 1223445543311 111 12344
Q ss_pred EEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEec
Q 018860 210 VKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 210 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs 289 (349)
+++|+.. .....+..++++|.++++++++ ++.|++||+.+++.+..+... ..+.+++|+|++++|++++
T Consensus 245 ~~~~~~~--------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~ 313 (349)
T 1jmx_B 245 THTQEFA--------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGG 313 (349)
T ss_dssp EEEEEEE--------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEES
T ss_pred EEecccc--------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEec
Confidence 4444432 1233456778888347777777 889999999999887766533 3578999999999998888
Q ss_pred CCCCEEEecCCCC
Q 018860 290 EDGTIRIWQTGPV 302 (349)
Q Consensus 290 ~Dg~v~vW~~~~~ 302 (349)
.++.|++||+...
T Consensus 314 ~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 314 TFNDLAVFNPDTL 326 (349)
T ss_dssp BSSEEEEEETTTT
T ss_pred CCCeEEEEecccc
Confidence 9999999998643
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=1.7e-22 Score=205.25 Aligned_cols=280 Identities=13% Similarity=0.080 Sum_probs=209.5
Q ss_pred eeeccCCCceeeEEEeecCCCccEEEEEecC----C--CeEEEeCCCCCeEEEeecccCCe-------EEEEECCCCCee
Q 018860 10 LVCHGHSRPVVDLFYSPITPDGFFLISASKD----S--SPMLRNGETGDWIGTFEGHKGAV-------WSCCLDTNALRA 76 (349)
Q Consensus 10 ~~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d----~--~i~iw~~~~~~~~~~~~~h~~~v-------~~~~~~~~~~~l 76 (349)
..+.+|.+.|.+++||| ||++|+.++.+ + .|.+|+..+++ .+.+.+|...+ ..++|+||++.+
T Consensus 46 ~~lt~~~~~v~~~~~SP---DG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll 121 (1045)
T 1k32_A 46 RKIVSNLGVINNARFFP---DGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLI 121 (1045)
T ss_dssp EEEECSSSEEEEEEECT---TSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEE
T ss_pred EEeeeCCCcccCeEECC---CCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEE
Confidence 34568999999999997 99999988764 3 68899988766 67788898888 999999999978
Q ss_pred EEeeCC------CeEEEEECCCCCEEEEe--------------------------------------------------c
Q 018860 77 ASASAD------FSAKVWDALTGDVLHSF--------------------------------------------------E 100 (349)
Q Consensus 77 ~s~s~D------~~i~vWd~~~~~~~~~~--------------------------------------------------~ 100 (349)
++++.+ ..|.+|++.+++..... .
T Consensus 122 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~ 201 (1045)
T 1k32_A 122 ISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD 201 (1045)
T ss_dssp EEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC
T ss_pred EEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcC
Confidence 888755 45788887666533211 1
Q ss_pred cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce
Q 018860 101 HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI 180 (349)
Q Consensus 101 ~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~ 180 (349)
|...+.++.|+++ .++++++.|+.+++|.++......+.+..+. .+....|+|++..++.+ . ++.|++||+...+.
T Consensus 202 ~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~-~~~i~~~d~~~~~l 277 (1045)
T 1k32_A 202 MSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-K-GGSIYIFNPDTEKI 277 (1045)
T ss_dssp CSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-E-TTEEEEECTTTCCE
T ss_pred CCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-e-CCEEEEecCCceEe
Confidence 3445667778877 6667778889999998764333333343333 45667888877666554 3 58999999954443
Q ss_pred EEeecCC------------CCeeEEEEc-CCCcEEEEecCCeEEEEecCCceeeEEEcCCC-ceEEeeecCCCCCEEEEe
Q 018860 181 VQTLETK------------SPVTSAEVS-QDGRYITTADGSTVKFWDANHFGLVKSYNMPC-TIESASLEPKYGNKFVAG 246 (349)
Q Consensus 181 ~~~~~~~------------~~v~~~~~~-~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 246 (349)
. .+... ..+..+.|+ |+|+.++.+.++.+.+|++............. .+..+.|+ +++.++++
T Consensus 278 ~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s--dg~~l~~~ 354 (1045)
T 1k32_A 278 E-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD--TKVAFIHG 354 (1045)
T ss_dssp E-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS--SEEEEEEE
T ss_pred e-eeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc--CCCeEEEE
Confidence 3 44332 257899999 99998777668999999998776554333333 56677777 57888888
Q ss_pred cCCCeEE-EEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCC
Q 018860 247 GEDMWVR-FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 247 ~~d~~i~-v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
+.+..+. +||+.+++... +.+|...+..++|||+|++|++++.++.|++||+..
T Consensus 355 s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t 409 (1045)
T 1k32_A 355 TREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET 409 (1045)
T ss_dssp ETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC
Confidence 8888898 99998776544 347888999999999999999999999999999864
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=3.3e-21 Score=171.74 Aligned_cols=258 Identities=10% Similarity=0.072 Sum_probs=177.1
Q ss_pred CCCeEEEe--CCCCCeEE-EeecccCCeEEEEECCCCCeeEEeeC---CCeEEEEECCCCCE--EEE-eccCCeEEEEEE
Q 018860 40 DSSPMLRN--GETGDWIG-TFEGHKGAVWSCCLDTNALRAASASA---DFSAKVWDALTGDV--LHS-FEHKHIVRACSF 110 (349)
Q Consensus 40 d~~i~iw~--~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~vWd~~~~~~--~~~-~~~~~~v~~~~~ 110 (349)
++.|.+|. .+++++.. ....+......++|+|+++ |++++. ++.|++|++.+++. +.. ..+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 34566664 45565433 3344556677899999999 555554 68999999977653 333 235567789999
Q ss_pred cCCCCEEEEEe-CCCeEEEEECCCCCCCCc--eecc---------CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECC-C
Q 018860 111 SEDTHLLLTGG-MEKILRIFDLNRPDAPPR--EVDR---------SPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR-S 177 (349)
Q Consensus 111 s~~~~~l~s~~-~d~~i~lwd~~~~~~~~~--~~~~---------~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~-~ 177 (349)
+|+|++|++++ .++.+++|++........ .... ....+..++|+|++. ++++...++.|++||+. +
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTT
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCC
Confidence 99999888887 789999999864222111 1111 112477899998777 77777777899999998 5
Q ss_pred CceEE--ee--cCCCCeeEEEEcCCCcEEEE-e-cCCeEEEEecCC--cee--eEEEc-CC------CceEEeeecCCCC
Q 018860 178 GEIVQ--TL--ETKSPVTSAEVSQDGRYITT-A-DGSTVKFWDANH--FGL--VKSYN-MP------CTIESASLEPKYG 240 (349)
Q Consensus 178 ~~~~~--~~--~~~~~v~~~~~~~~~~~l~~-~-~d~~i~iwd~~~--~~~--~~~~~-~~------~~~~~~~~~~~~~ 240 (349)
++... .+ ........++|+|+++++.. + .++.+.+|++.. +.. +.... .+ ..+..++|+|+ +
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd-G 251 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD-G 251 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT-S
T ss_pred CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC-C
Confidence 55432 22 22335678999999986544 3 478999999874 332 22222 12 23667889885 6
Q ss_pred CEE-EEecCCCeEEEEeCCCC---cEEEEecCCCcceeEEEEccCCCeEEEecC-CCCEEEecCC
Q 018860 241 NKF-VAGGEDMWVRFFDFHTG---NEIACNKGHHGPVHCVRFSPGGESYASGSE-DGTIRIWQTG 300 (349)
Q Consensus 241 ~~~-~~~~~d~~i~v~d~~~~---~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~-Dg~v~vW~~~ 300 (349)
+++ ++...++.|.+|++... +.+..+..+...+..++|+|++++|++++. ++.|.+|+++
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 655 56667899999998732 445556666777899999999998887765 5899999653
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=3.6e-22 Score=202.85 Aligned_cols=276 Identities=13% Similarity=0.018 Sum_probs=212.4
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC-CCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET-GDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
.+.+|.+.+.++.|++ + .++++++.|+++++|.... +.....+..|. .+...+|+|++++|+.+ .++.|++|+
T Consensus 198 ~l~~~~~~v~~~~~s~---d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d 271 (1045)
T 1k32_A 198 KIVDMSTHVSSPVIVG---H-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFN 271 (1045)
T ss_dssp EEECCSSCCEEEEEET---T-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEEC
T ss_pred ECcCCCCcccceEEeC---C-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEec
Confidence 3478999999999986 5 6777888899999997543 34455666665 35677999999999887 489999999
Q ss_pred CCCCCEEEEecc------------CCeEEEEEEc-CCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCC-CeEEEEEec
Q 018860 90 ALTGDVLHSFEH------------KHIVRACSFS-EDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPG-SVRTVAWLH 155 (349)
Q Consensus 90 ~~~~~~~~~~~~------------~~~v~~~~~s-~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~-~i~~~~~~~ 155 (349)
+...+.. .+.. ...+..++|+ |+|+.|++++ ++.+.+|++.... ...+..+.. .+..+.|+
T Consensus 272 ~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 272 PDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY--VLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp TTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB--EEECSCCSCEEEEEECSS-
T ss_pred CCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc--eEEccCCCcceEEeeeEc-
Confidence 9554433 4332 2357899999 9999999888 7889999986432 223445556 78889998
Q ss_pred CCCeEEEEeeCCCeEE-EEECCCCceEEeecCCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEE-cCCCceEE
Q 018860 156 SDQTILSTCTDMGGVR-LWDVRSGEIVQTLETKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSY-NMPCTIES 232 (349)
Q Consensus 156 ~~~~~l~~~~~dg~v~-vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~-~~~~~~~~ 232 (349)
++..++.+++++.+. +||+.+++......+...+..+.|+||+++|+. +.++.|++||+.+++..... .+...+..
T Consensus 347 -dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 347 -TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 425 (1045)
T ss_dssp -SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCC
T ss_pred -CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccc
Confidence 455555566678888 999988776544434467899999999998765 56789999999988877666 44445677
Q ss_pred eeecCCCCCEEEEecCC----------CeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 233 ASLEPKYGNKFVAGGED----------MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~d----------~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
++|+|+ ++++++++.+ +.|++||+.+++ +..+..|...+.+++|+|+|++|+.++.++..++|+..
T Consensus 426 ~~~SpD-G~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 426 FTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp EEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred eEECCC-CCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 889984 8888877654 499999999877 66778888889999999999999999999988888754
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=1.1e-21 Score=191.31 Aligned_cols=271 Identities=14% Similarity=0.063 Sum_probs=187.6
Q ss_pred eeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeE-EEeeccc-----------------CCeEEEEECCCCCeeEEee
Q 018860 19 VVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWI-GTFEGHK-----------------GAVWSCCLDTNALRAASAS 80 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~-~~~~~h~-----------------~~v~~~~~~~~~~~l~s~s 80 (349)
+..+.|. |..+++++.|+ | +||..+++.+ ..+..|. ..|.+++|+|| .+++.+
T Consensus 28 ~~~~~w~-----g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~- 98 (706)
T 2z3z_A 28 VVGLQWM-----GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF- 98 (706)
T ss_dssp CTTCEEE-----TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-
T ss_pred CCCCcCc-----CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-
Confidence 4455665 34566777888 8 9999998874 4454443 46999999999 555544
Q ss_pred CCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----CCCCCceeccCCCC--------
Q 018860 81 ADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR-----PDAPPREVDRSPGS-------- 147 (349)
Q Consensus 81 ~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~-----~~~~~~~~~~~~~~-------- 147 (349)
.|+.|++||+.+++......+...+..++|+|||+.|+.+ .|+.|++||+.+ ... ..........
T Consensus 99 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~-~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 99 TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA-IAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC-EESCSCCBTTEEESSCCG
T ss_pred ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc-EEeccCCCCCeEcccchh
Confidence 4699999999998877777777778899999999999985 679999999976 332 1111222222
Q ss_pred ------eEEEEEecCCCeEEEEee--------------------------------CCCeEEEEECCCCceEEeec---C
Q 018860 148 ------VRTVAWLHSDQTILSTCT--------------------------------DMGGVRLWDVRSGEIVQTLE---T 186 (349)
Q Consensus 148 ------i~~~~~~~~~~~~l~~~~--------------------------------~dg~v~vwd~~~~~~~~~~~---~ 186 (349)
+.++.|+|++..+++++. .+..|++||+.+++...... +
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 478899988777666542 33689999999987654432 2
Q ss_pred CCCeeEEEEcCCCcEEEE-ecCC-----eEEEEecCCc-eeeEEEc--CCC---ceEEeeecC-CCCCEEEEecCCCeEE
Q 018860 187 KSPVTSAEVSQDGRYITT-ADGS-----TVKFWDANHF-GLVKSYN--MPC---TIESASLEP-KYGNKFVAGGEDMWVR 253 (349)
Q Consensus 187 ~~~v~~~~~~~~~~~l~~-~~d~-----~i~iwd~~~~-~~~~~~~--~~~---~~~~~~~~~-~~~~~~~~~~~d~~i~ 253 (349)
...+..+.|+||++.|+. +.++ .|.+||+.++ ....... ... .+..+.|+| .++++++++..|+.++
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~ 336 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNH 336 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccE
Confidence 346889999999987654 4443 8999999887 3332221 111 123567887 1367888888899999
Q ss_pred EEeCC-CCcEEEEecCCCcceeE-EEEccCCCeEEE-ecCCC----CEEEecCC
Q 018860 254 FFDFH-TGNEIACNKGHHGPVHC-VRFSPGGESYAS-GSEDG----TIRIWQTG 300 (349)
Q Consensus 254 v~d~~-~~~~~~~~~~h~~~i~~-l~~sp~~~~l~s-gs~Dg----~v~vW~~~ 300 (349)
+|++. ++..+..+..|...+.+ ++|+|+++.|+. ++.++ .|..|++.
T Consensus 337 l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 337 LYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp EEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred EEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 99876 66777778888888877 799999998764 45554 45666654
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=9.1e-21 Score=168.79 Aligned_cols=239 Identities=11% Similarity=0.085 Sum_probs=183.0
Q ss_pred ccCCeEEEEECCCCCeeEEeeC-------CCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEE-EEeCCCeEEEEEC
Q 018860 60 HKGAVWSCCLDTNALRAASASA-------DFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLL-TGGMEKILRIFDL 131 (349)
Q Consensus 60 h~~~v~~~~~~~~~~~l~s~s~-------D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d~~i~lwd~ 131 (349)
....+..++|+++++++++++. ++.|.+||..+++.+..+.....+..++|+|++++++ +...++.|.+||+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 3456788999999988887774 6789999999999988887766788899999999554 5556899999998
Q ss_pred CCCCCCCceeccCC---------CCeEEEEEecCCCeEEEEe-eCCCeEEEEECCCCceEEeec-CCCCeeEEEEcCCCc
Q 018860 132 NRPDAPPREVDRSP---------GSVRTVAWLHSDQTILSTC-TDMGGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDGR 200 (349)
Q Consensus 132 ~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~ 200 (349)
.+.+.. ..+..+. ..+..+.|+|++..+++++ ..++.|.+||+.+++.+..+. ....+..+.++|+++
T Consensus 119 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 119 KTGEVK-GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTCCEE-EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCeeE-EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 765431 2222211 1267899998888777666 457899999999999988887 444577889999998
Q ss_pred EEEE-ecCCeEEEEecCCceeeEEEcC-----CCceEEeeecCCCCCEE-EEecCCCeEEEEeCCCCcEEEEecCCCcce
Q 018860 201 YITT-ADGSTVKFWDANHFGLVKSYNM-----PCTIESASLEPKYGNKF-VAGGEDMWVRFFDFHTGNEIACNKGHHGPV 273 (349)
Q Consensus 201 ~l~~-~~d~~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i 273 (349)
++.. ..++.|.+||+.+.+....+.. ...+..++++|. ++.+ ++...++.|.+||..+++.+..+.... .
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~ 274 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA-RQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--S 274 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT-TTEEEEEESSSSEEEEEETTTCCEEEEEECSS--C
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--C
Confidence 7655 4588999999999988877654 223566888886 5544 455567999999999999887766443 2
Q ss_pred eEEEEccCCCeEE-EecCCCCEEEecCCCC
Q 018860 274 HCVRFSPGGESYA-SGSEDGTIRIWQTGPV 302 (349)
Q Consensus 274 ~~l~~sp~~~~l~-sgs~Dg~v~vW~~~~~ 302 (349)
..++|+|++++++ +...++.|.+||+...
T Consensus 275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 275 LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 5799999999654 5557999999998644
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=3.7e-22 Score=190.45 Aligned_cols=233 Identities=12% Similarity=0.068 Sum_probs=178.4
Q ss_pred ccCCeEEEEECCCCCeeEEeeC-CCeEEEEECCCCCEEEEeccC-CeEEEEEEcCCCCEEEEEeC---CCeEEEEECCC-
Q 018860 60 HKGAVWSCCLDTNALRAASASA-DFSAKVWDALTGDVLHSFEHK-HIVRACSFSEDTHLLLTGGM---EKILRIFDLNR- 133 (349)
Q Consensus 60 h~~~v~~~~~~~~~~~l~s~s~-D~~i~vWd~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~---d~~i~lwd~~~- 133 (349)
+..+|++++|++||++||+++. |++++||++.+++......+. ..+..++|+|| +++++++. +...++|.++.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 4678999999999999999887 999999999777766655565 58999999999 77777765 56667776644
Q ss_pred -CCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEE-ecC----
Q 018860 134 -PDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITT-ADG---- 207 (349)
Q Consensus 134 -~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d---- 207 (349)
..... .+. ........+|+|+++.++.++..++.+.+||+.+++......... .++.++|||++++. +.+
T Consensus 99 ~~g~~~-~l~-~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 99 RPGEEQ-RLE-AVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp STTCCE-ECT-TSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred CCCccc-ccc-CCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence 22221 222 222345668888776554444444566699999887665554433 78899999999874 434
Q ss_pred CeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCC--eEEEEeCCCCcEEEEecCCCcceeEEE--------
Q 018860 208 STVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDM--WVRFFDFHTGNEIACNKGHHGPVHCVR-------- 277 (349)
Q Consensus 208 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~i~v~d~~~~~~~~~~~~h~~~i~~l~-------- 277 (349)
..|.+||+.++...............+|+|+ ++.++++..++ .|++||+.+++.. .+.+|...+..++
T Consensus 175 ~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpD-G~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVFDSGEGSFSSASISPG-MKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLG 252 (582)
T ss_dssp EEEEEEETTTCCCEEECCSSCEEEEEEECTT-SCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEE
T ss_pred eEEEEEcCCCCCceEeecCCCccccceECCC-CCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccccee
Confidence 6799999988776655455556788899984 88888888888 9999999998887 7778888888788
Q ss_pred EccCCCeEEEecCCCCEEEecC
Q 018860 278 FSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 278 ~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
|+|+|.++++++.|+++++|++
T Consensus 253 ~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 253 YLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTSCEEEEEEETTEEEEEET
T ss_pred EcCCCcEEEEEEcCCcEEEEEE
Confidence 9999988899999999999998
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=5.2e-22 Score=189.43 Aligned_cols=268 Identities=14% Similarity=0.059 Sum_probs=187.7
Q ss_pred CCCceeeEEEeecCCCccEEEEEec-CCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeC---CCeEEEEEC
Q 018860 15 HSRPVVDLFYSPITPDGFFLISASK-DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASA---DFSAKVWDA 90 (349)
Q Consensus 15 h~~~v~~~~fs~~~~~~~~l~s~s~-d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~vWd~ 90 (349)
+..+|.+++|+| ||++||.++. |+++++|+..+++..+...+|...+..++|+|| +.+++++. +...++|.+
T Consensus 20 ~~~~~~~~~~~~---DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 20 IAVEKYSLQGVV---DGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HHSCEEEEEEEE---TTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred hccchheeecCC---CCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 467899999998 9999999887 999999998666554444444468999999999 77887775 565667654
Q ss_pred CC---CCEEEEeccCCeEEEEEEcCCCC--EEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEee
Q 018860 91 LT---GDVLHSFEHKHIVRACSFSEDTH--LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT 165 (349)
Q Consensus 91 ~~---~~~~~~~~~~~~v~~~~~s~~~~--~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~ 165 (349)
.. +... .+.....+...+|+|+++ .+++++.++ +.+||+.+... +.+..++. .++.|+|++..++.++.
T Consensus 96 ~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~--~~l~~~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 96 NTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGL--RELARLPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp ETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEE--EEEEEESS--CEEEEEEETTEEEEEEE
T ss_pred eccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcE--EEeecCCC--ceEEECCCCCEEEEEEE
Confidence 32 2222 333333344667888875 344455555 55999865432 22222222 67888887766554443
Q ss_pred CC---CeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEec-CC--eEEEEecCCceeeEEEcC-CCceEEee----
Q 018860 166 DM---GGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTAD-GS--TVKFWDANHFGLVKSYNM-PCTIESAS---- 234 (349)
Q Consensus 166 ~d---g~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-d~--~i~iwd~~~~~~~~~~~~-~~~~~~~~---- 234 (349)
+. +.|++||+.+++......+...+..+.|+|||++|++++ ++ .|.+||+.+.... .... ...+..+.
T Consensus 170 ~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred cCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 21 679999999888764444556688999999999887654 66 8999999887766 3322 22333445
Q ss_pred ----ecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCC---EEEecCC
Q 018860 235 ----LEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGT---IRIWQTG 300 (349)
Q Consensus 235 ----~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~---v~vW~~~ 300 (349)
|+|+ +..+++++.|+.+++|++ ++... ...+.|.+++|+ +++++++++.+.+ +.+|+..
T Consensus 249 ~~~~~spd-g~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 249 TWLGYLPD-GRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEEECTT-SCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred cceeEcCC-CcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 8886 588889999999999999 66544 345778999999 9999998888754 6777754
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=3.8e-21 Score=166.30 Aligned_cols=233 Identities=13% Similarity=0.116 Sum_probs=172.7
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCC-CCeEEEeeccc-CCeEEEEECCCCCeeEEee--CCCeEE
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGET-GDWIGTFEGHK-GAVWSCCLDTNALRAASAS--ADFSAK 86 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~-~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s--~D~~i~ 86 (349)
.+..|.+.|.+++|+| +|++|++++ ++.+.+|+..+ ++....+.+|. ..+.+++|+|++++|++++ .++.++
T Consensus 36 ~~~~~~~~v~~~~~sp---dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSP---DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSA 111 (297)
T ss_dssp EEEEESSCCEEEEECT---TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCE
T ss_pred eeccCCcceEeeEECC---CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcce
Confidence 3457889999999997 899999886 78999999998 88877777764 6789999999999999998 334555
Q ss_pred EE--ECCCCCEEEEeccCCeEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 87 VW--DALTGDVLHSFEHKHIVRACSFSEDTHLLL-TGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 87 vW--d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
|| +..+++ ...+.+...+..++|+|+++.|+ +++.++.+++|+++........+..+...+..+.|+|++..++++
T Consensus 112 l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 190 (297)
T 2ojh_A 112 IYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFN 190 (297)
T ss_dssp EEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEE
Confidence 55 455554 34444445588999999999887 788899999999754433344555667789999999888777777
Q ss_pred eeCCCeEEEEECC-CCceEEeecC-CCCeeEEEEcCCCcEEEEe-cC-----------CeEEEEecCCceeeEEE---cC
Q 018860 164 CTDMGGVRLWDVR-SGEIVQTLET-KSPVTSAEVSQDGRYITTA-DG-----------STVKFWDANHFGLVKSY---NM 226 (349)
Q Consensus 164 ~~~dg~v~vwd~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~d-----------~~i~iwd~~~~~~~~~~---~~ 226 (349)
+..++.+++|++. .+.....+.. ...+..+.|+|++++|+.+ .+ ..|.+||+.+....... .+
T Consensus 191 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 270 (297)
T 2ojh_A 191 SSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG 270 (297)
T ss_dssp ECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES
T ss_pred ecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCC
Confidence 7667899999885 4444444443 4467889999999876543 33 46999999876553332 33
Q ss_pred CCceEEeeecCCCCCEEEEecCC
Q 018860 227 PCTIESASLEPKYGNKFVAGGED 249 (349)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~d 249 (349)
...+..+.|+|. ++.+++++.+
T Consensus 271 ~~~~~~~~~spd-g~~l~~~~~~ 292 (297)
T 2ojh_A 271 QGTMNSPNWSPD-GDEFAYVRYF 292 (297)
T ss_dssp TTTSCSCCBCTT-SSEEEEEEEC
T ss_pred CcccccceECCC-CCEEEEEEec
Confidence 445667888875 6777766544
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=5.2e-22 Score=194.02 Aligned_cols=272 Identities=11% Similarity=0.013 Sum_probs=188.4
Q ss_pred eEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccC---CeEEEEECCCCCeeEEeeC---------CCeEEEE
Q 018860 21 DLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDTNALRAASASA---------DFSAKVW 88 (349)
Q Consensus 21 ~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~s~s~---------D~~i~vW 88 (349)
.+.|+| +|+++++ +.|+++++|+..+++....+.+|.. .+.+++|+|||++|++++. |+.|++|
T Consensus 20 ~~~~s~---dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWIS---GQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESS---SSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECC---CCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 678887 8876665 4699999999999998888877765 4899999999999998876 7999999
Q ss_pred ECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCe-----------------EEE
Q 018860 89 DALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV-----------------RTV 151 (349)
Q Consensus 89 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i-----------------~~~ 151 (349)
|+.+++.+........+..++|||||+.|+.+. ++.|++|++.+.........++...+ .++
T Consensus 96 d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 96 DLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp ETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred ECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 999887632122235688899999999999886 78999999875443111111222112 478
Q ss_pred EEecCCCeEEEEeeCCC---------------------------------eEEEEECCCCceE--Eee-------cCCCC
Q 018860 152 AWLHSDQTILSTCTDMG---------------------------------GVRLWDVRSGEIV--QTL-------ETKSP 189 (349)
Q Consensus 152 ~~~~~~~~~l~~~~~dg---------------------------------~v~vwd~~~~~~~--~~~-------~~~~~ 189 (349)
.|+|++..++.++.+++ .|++||+.+++.. ..+ .+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 99988777766554422 7899999987642 111 12345
Q ss_pred eeEEEEcCCCcEEEEec---C--CeEEEEe----cCCceeeEEE-----cCCCceE-----EeeecCCCCCEEE--EecC
Q 018860 190 VTSAEVSQDGRYITTAD---G--STVKFWD----ANHFGLVKSY-----NMPCTIE-----SASLEPKYGNKFV--AGGE 248 (349)
Q Consensus 190 v~~~~~~~~~~~l~~~~---d--~~i~iwd----~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~~~~--~~~~ 248 (349)
+..+.|+||+++++... + ..|.+|| +.++++.... .....+. ...|+|+ ++.++ +...
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~ 333 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYD-AISYYKIFSDK 333 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTT-SSCEEEEEECT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCC-CCeEEEEEEcc
Confidence 78999999988776532 2 2488899 7766554433 1222222 5678875 55333 3444
Q ss_pred CC--eEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecC-----CCCEEEecCC
Q 018860 249 DM--WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSE-----DGTIRIWQTG 300 (349)
Q Consensus 249 d~--~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~-----Dg~v~vW~~~ 300 (349)
++ .|.+||+.+++ ...+..+...+..+.++ +++.|+..+. ++..++|.+.
T Consensus 334 ~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 334 DGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp TSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred CCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 44 67778887766 44556666678888888 7777765544 4889999764
No 152
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=8.5e-21 Score=167.67 Aligned_cols=242 Identities=14% Similarity=0.102 Sum_probs=181.8
Q ss_pred ceeeEEEeecCCCccEE-EEEecCCCeEEEeCCCCCeEEEeec-c----cCCeEEEEECCCCCeeEEee-----------
Q 018860 18 PVVDLFYSPITPDGFFL-ISASKDSSPMLRNGETGDWIGTFEG-H----KGAVWSCCLDTNALRAASAS----------- 80 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l-~s~s~d~~i~iw~~~~~~~~~~~~~-h----~~~v~~~~~~~~~~~l~s~s----------- 80 (349)
.+..++|+| +|+++ ++++.++.+.+|+..+++.+..+.. + ...+..++|++++++|++++
T Consensus 35 ~~~~~~~s~---dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVAP---GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEECT---TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CccceEEcC---CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccc
Confidence 478899987 78665 5566678999999999998877763 2 23567899999999888886
Q ss_pred -CCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCe
Q 018860 81 -ADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQT 159 (349)
Q Consensus 81 -~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 159 (349)
.++.|++||+.+++.+..+.....+..++|+|++++|+++ ++.|.+||+.+.+.. ..+.... ....+.|+|++..
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~-~~~~~~~-~~~~~~~s~dg~~ 187 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLV-EDKPIQS-WEAETYAQPDVLA 187 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEE-EEECSTT-TTTTTBCCCBCCC
T ss_pred ccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEe-eeeeccc-cCCCceeCCCccE
Confidence 5799999999999888887766678889999999988887 678999998754321 1111111 0011245555554
Q ss_pred EEEEeeCCC-----------------------eEEEEECCCCceEEee---cCCCCeeEEEEcCCCcEEEEecCCeEEEE
Q 018860 160 ILSTCTDMG-----------------------GVRLWDVRSGEIVQTL---ETKSPVTSAEVSQDGRYITTADGSTVKFW 213 (349)
Q Consensus 160 ~l~~~~~dg-----------------------~v~vwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~d~~i~iw 213 (349)
+++++..++ .|.+||+.+++.. .+ .....+..+.++|+++++.++ ++.|.+|
T Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~ 265 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESF 265 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEE
T ss_pred EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe-CCeEEEE
Confidence 544443333 4789999998765 22 223456789999999988777 7899999
Q ss_pred ecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCC
Q 018860 214 DANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH 269 (349)
Q Consensus 214 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h 269 (349)
|+.+.+.+..+.....+..++|+|. ++++++++.++.|++||+.+++.+..+..+
T Consensus 266 d~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 266 DLEKNASIKRVPLPHSYYSVNVSTD-GSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp ETTTTEEEEEEECSSCCCEEEECTT-SCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred ECCCCcCcceecCCCceeeEEECCC-CCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 9999988888777767778899885 778888888999999999999888776544
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=3e-21 Score=188.67 Aligned_cols=270 Identities=15% Similarity=0.125 Sum_probs=184.0
Q ss_pred eccCCC---ceeeEEEeecCCCccEEEEEecC---------CCeEEEeCCCCCeEEEe---ecccCCeEEEEECCCCCee
Q 018860 12 CHGHSR---PVVDLFYSPITPDGFFLISASKD---------SSPMLRNGETGDWIGTF---EGHKGAVWSCCLDTNALRA 76 (349)
Q Consensus 12 ~~gh~~---~v~~~~fs~~~~~~~~l~s~s~d---------~~i~iw~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l 76 (349)
+.+|.. .|.+++||| ||++|++++.+ +.+.+|+..+++. ..+ .+|...+..++|+|||++|
T Consensus 53 ~~~~~~~~~~v~~~~~Sp---Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~l 128 (723)
T 1xfd_A 53 IEGKKIESLRAIRYEISP---DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQL 128 (723)
T ss_dssp ECTTTTTTTTCSEEEECT---TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCE
T ss_pred eccccccccccceEEECC---CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEE
Confidence 455654 489999997 99999999875 5677999988876 333 3455668899999999999
Q ss_pred EEeeCCCeEEEEECCCCCEEEEecc-CCe------------------EEEEEEcCCCCEEEEEeCCC-------------
Q 018860 77 ASASADFSAKVWDALTGDVLHSFEH-KHI------------------VRACSFSEDTHLLLTGGMEK------------- 124 (349)
Q Consensus 77 ~s~s~D~~i~vWd~~~~~~~~~~~~-~~~------------------v~~~~~s~~~~~l~s~~~d~------------- 124 (349)
+.++. +.|++||+.+++....... ... +.+++|+|||+.|++++.|+
T Consensus 129 a~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~ 207 (723)
T 1xfd_A 129 IFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG 207 (723)
T ss_dssp EEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS
T ss_pred EEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC
Confidence 99886 7999999998877665442 222 27899999999999987553
Q ss_pred ---------------------eEEEEECCCCCCCCceecc------CCCCeEEEEEecCCCeEEEEee---CCCeEEEEE
Q 018860 125 ---------------------ILRIFDLNRPDAPPREVDR------SPGSVRTVAWLHSDQTILSTCT---DMGGVRLWD 174 (349)
Q Consensus 125 ---------------------~i~lwd~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~l~~~~---~dg~v~vwd 174 (349)
.|++||+.+... ...+.. +...+..+.|+|++..++.... .+..|++||
T Consensus 208 ~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 208 SIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp SSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred cCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 789999876542 122222 2456888999986654434332 235799999
Q ss_pred CCCCceEEeecC--CCCe----eEEEEcCCCcEEE-E-e-cCC------eEEEEe-cCCce--eeEEEc-CCCceEE-ee
Q 018860 175 VRSGEIVQTLET--KSPV----TSAEVSQDGRYIT-T-A-DGS------TVKFWD-ANHFG--LVKSYN-MPCTIES-AS 234 (349)
Q Consensus 175 ~~~~~~~~~~~~--~~~v----~~~~~~~~~~~l~-~-~-~d~------~i~iwd-~~~~~--~~~~~~-~~~~~~~-~~ 234 (349)
+.++++...+.. ...+ ..+.|+|||+.|+ . + .++ .|.+|| ..... +.+.+. ....+.. +.
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~ 366 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILA 366 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEE
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeE
Confidence 999887655432 2222 3689999998543 2 3 456 466677 33333 033332 2223333 57
Q ss_pred ecCCCCCEEEEe-cCC--CeEEEEeCCCCc--EEEEecC---CCcceeEEEEccCCCeEEEe
Q 018860 235 LEPKYGNKFVAG-GED--MWVRFFDFHTGN--EIACNKG---HHGPVHCVRFSPGGESYASG 288 (349)
Q Consensus 235 ~~~~~~~~~~~~-~~d--~~i~v~d~~~~~--~~~~~~~---h~~~i~~l~~sp~~~~l~sg 288 (349)
|+|+ ++.++.. ..+ +.+++|++.... ....+.. |...+..++|+|++++|+..
T Consensus 367 ~spd-g~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 367 YDEK-GNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp EETT-TTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred EcCC-CCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 8885 6776654 444 788999876432 3333443 67778999999999987743
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=2.8e-19 Score=160.17 Aligned_cols=267 Identities=11% Similarity=0.091 Sum_probs=180.1
Q ss_pred CccEEEEEec----CCCeEEEeC--CCCCeEEEeecccCCeEEEEECCCCCeeEEeeCC----CeEEEEECCC--CCE--
Q 018860 30 DGFFLISASK----DSSPMLRNG--ETGDWIGTFEGHKGAVWSCCLDTNALRAASASAD----FSAKVWDALT--GDV-- 95 (349)
Q Consensus 30 ~~~~l~s~s~----d~~i~iw~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D----~~i~vWd~~~--~~~-- 95 (349)
...+++.|+. ++.|.+|.. .++++......|......++|+|++++|++++.+ +.|++|++.. ++.
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~ 91 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL 91 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence 3456666754 457888854 5666533222266777889999999999999886 7999998765 433
Q ss_pred EEEec-cCCeEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCCCCCce--ec-----------cCCCCeEEEEEecCCCeE
Q 018860 96 LHSFE-HKHIVRACSFSEDTHLLLTGG-MEKILRIFDLNRPDAPPRE--VD-----------RSPGSVRTVAWLHSDQTI 160 (349)
Q Consensus 96 ~~~~~-~~~~v~~~~~s~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~--~~-----------~~~~~i~~~~~~~~~~~~ 160 (349)
+.... +......+++ ++++|++++ .++.+.+|++......... .. .+...+..++|+|++..+
T Consensus 92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 22332 3445677777 788777766 6889999998653321111 00 112235779999888778
Q ss_pred EEEeeCCCeEEEEECCCCc-------e-------EEeecCCCCeeEEEEcCCCcEEEE-e-cCCeEEEEecCCcee--eE
Q 018860 161 LSTCTDMGGVRLWDVRSGE-------I-------VQTLETKSPVTSAEVSQDGRYITT-A-DGSTVKFWDANHFGL--VK 222 (349)
Q Consensus 161 l~~~~~dg~v~vwd~~~~~-------~-------~~~~~~~~~v~~~~~~~~~~~l~~-~-~d~~i~iwd~~~~~~--~~ 222 (349)
++++..++.|++|++.... . ............+.|+|+++++.. . .++.|.+||+.++.. +.
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 7777767899999886433 1 122333456788999999987644 4 478999999986544 22
Q ss_pred EEcC-C---CceEEeeecCCCCCEEEEec-C-CCeEEEEeCC--CCc--EEEEecCCCcceeEEEEccCCCeEEEec-CC
Q 018860 223 SYNM-P---CTIESASLEPKYGNKFVAGG-E-DMWVRFFDFH--TGN--EIACNKGHHGPVHCVRFSPGGESYASGS-ED 291 (349)
Q Consensus 223 ~~~~-~---~~~~~~~~~~~~~~~~~~~~-~-d~~i~v~d~~--~~~--~~~~~~~h~~~i~~l~~sp~~~~l~sgs-~D 291 (349)
.... + .....++|+|+ +++++++. . ++.|.+|++. +++ .+..+.. ...+.+++|+|++++|++++ .+
T Consensus 250 ~~~~~~~~~~~~~~i~~spd-g~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSPD-GKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp EEESCSSCCCCEEEEEECTT-SSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTT
T ss_pred EEecCCCCCCCcccEEECCC-CCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCC
Confidence 2221 1 22457888885 77775554 4 5899999985 444 3344444 45788999999999888776 67
Q ss_pred CCEEEecCC
Q 018860 292 GTIRIWQTG 300 (349)
Q Consensus 292 g~v~vW~~~ 300 (349)
+.|.+|+++
T Consensus 328 ~~v~v~~~d 336 (361)
T 3scy_A 328 NVIQIFERD 336 (361)
T ss_dssp TEEEEEEEC
T ss_pred CCEEEEEEE
Confidence 899997654
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.87 E-value=9.2e-20 Score=162.37 Aligned_cols=245 Identities=12% Similarity=0.120 Sum_probs=170.9
Q ss_pred cCCCceeeEEEeecCCCccEEEEEec---CCCeEEEeCCCCC--eEEEeecccCCeEEEEECCCCCeeEEee-CCCeEEE
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASK---DSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDTNALRAASAS-ADFSAKV 87 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~---d~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i~v 87 (349)
.+...+..++|+| +|+ |++++. ++.+.+|+..+++ .+..+..|...+..++|+|++++|++++ .++.|++
T Consensus 37 ~~~~~p~~~a~sp---dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 37 AATQNPTYLALSA---KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEV 112 (347)
T ss_dssp EECSCCCCEEECT---TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEE
T ss_pred eccCCcceEEEcc---CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEE
Confidence 4556677899997 888 655554 5899999987665 4555566778889999999999888888 7899999
Q ss_pred EECC-CCC--EEEEeccC----------CeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCc--eecc-CCCCeEEE
Q 018860 88 WDAL-TGD--VLHSFEHK----------HIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR--EVDR-SPGSVRTV 151 (349)
Q Consensus 88 Wd~~-~~~--~~~~~~~~----------~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~--~~~~-~~~~i~~~ 151 (349)
|++. ++. .+..+.+. ..+.+++|+|+|+++++...++.|++|++........ .... ....+..+
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 9985 333 23333221 2488999999999666667789999999973222111 1111 22357789
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECCC--Cce--EEeecC-C------CCeeEEEEcCCCcEEE-Ee-cCCeEEEEecCC-
Q 018860 152 AWLHSDQTILSTCTDMGGVRLWDVRS--GEI--VQTLET-K------SPVTSAEVSQDGRYIT-TA-DGSTVKFWDANH- 217 (349)
Q Consensus 152 ~~~~~~~~~l~~~~~dg~v~vwd~~~--~~~--~~~~~~-~------~~v~~~~~~~~~~~l~-~~-~d~~i~iwd~~~- 217 (349)
+|+|++..+++++..++.|++|++.. ++. +..+.. . ..+..++|+|+|++|. +. .++.|.+||+..
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 99988777777777789999999874 543 222221 1 3477899999998763 33 478999999873
Q ss_pred --ceeeEEEcC-CCceEEeeecCCCCCEEEEec-CCCeEEEE--eCCCCcEE
Q 018860 218 --FGLVKSYNM-PCTIESASLEPKYGNKFVAGG-EDMWVRFF--DFHTGNEI 263 (349)
Q Consensus 218 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~d~~i~v~--d~~~~~~~ 263 (349)
...+..+.. ...+..++|+|+ ++++++++ .++.|.+| |..+++..
T Consensus 273 g~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 273 GHLTLIQQISTEGDFPRDFDLDPT-EAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GCEEEEEEEECSSSCCCEEEECTT-SSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CcEEEeEEEecCCCCcCeEEECCC-CCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 234444443 234667889885 67666665 56899999 55566654
No 156
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=1.9e-20 Score=172.14 Aligned_cols=160 Identities=16% Similarity=0.078 Sum_probs=126.3
Q ss_pred cCCCceeeEEEeecCCCccEEE----EEecCCCeEEEeCCCC--------C---eEEEeecccCCeEEEEECCC-CCeeE
Q 018860 14 GHSRPVVDLFYSPITPDGFFLI----SASKDSSPMLRNGETG--------D---WIGTFEGHKGAVWSCCLDTN-ALRAA 77 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~----s~s~d~~i~iw~~~~~--------~---~~~~~~~h~~~v~~~~~~~~-~~~l~ 77 (349)
.|.++|.+++|+| +|++|+ +|+.|+++++|+..++ + .+..+.+|...|.+++|+|+ +.+|+
T Consensus 90 ~~~~~v~~l~~sp---dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 90 PMKFPIHHLALSC---DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVA 166 (434)
T ss_dssp CCSSCEEEEEECT---TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEE
T ss_pred cCCCcccEEEEcC---CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEE
Confidence 4567899999997 899999 8999999999996543 1 25677889999999999998 78999
Q ss_pred EeeCCCeEEEEECCCCCEEEE-eccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceecc-------CCCCeE
Q 018860 78 SASADFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDR-------SPGSVR 149 (349)
Q Consensus 78 s~s~D~~i~vWd~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~-------~~~~i~ 149 (349)
+++.|++|++||+.++..... ..|...|++++|+|+|++|++|+.|++|++||++ .. ....+.. |...+.
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~-~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ-EKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp EEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC-EEEEECCCTTCCTTSCEEEE
T ss_pred EEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc-ccccccCCcccCCCCceeEE
Confidence 999999999999998865543 4578899999999999999999999999999986 21 1112211 233789
Q ss_pred EEEEecCCCeEEEEeeCCC------eEEEEECCCC
Q 018860 150 TVAWLHSDQTILSTCTDMG------GVRLWDVRSG 178 (349)
Q Consensus 150 ~~~~~~~~~~~l~~~~~dg------~v~vwd~~~~ 178 (349)
++.|.++...+++.+..+| .+++||++..
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999986655544444443 3899999864
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=6.6e-19 Score=157.73 Aligned_cols=259 Identities=15% Similarity=0.127 Sum_probs=175.5
Q ss_pred CCCceeeEEEeecCCCccEEEEEecC----CCeEEEeCCC--CCe--EEEeecccCCeEEEEECCCCCeeEEee-CCCeE
Q 018860 15 HSRPVVDLFYSPITPDGFFLISASKD----SSPMLRNGET--GDW--IGTFEGHKGAVWSCCLDTNALRAASAS-ADFSA 85 (349)
Q Consensus 15 h~~~v~~~~fs~~~~~~~~l~s~s~d----~~i~iw~~~~--~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s-~D~~i 85 (349)
|...+..++|+| +|++|++++.+ +.+.+|+... +++ +.....+......+++ ++++|++++ .++.|
T Consensus 48 ~~~~p~~l~~sp---dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSA---DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSI 122 (361)
T ss_dssp ECSCCCSEEECT---TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEE
T ss_pred cCCCCceEEECC---CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEE
Confidence 667778889987 89999999986 7899997654 443 3444445556677777 777777766 68899
Q ss_pred EEEECCCCCEEE----Eecc-----------CCeEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCCC----C-C------
Q 018860 86 KVWDALTGDVLH----SFEH-----------KHIVRACSFSEDTHLLLTGG-MEKILRIFDLNRPDA----P-P------ 138 (349)
Q Consensus 86 ~vWd~~~~~~~~----~~~~-----------~~~v~~~~~s~~~~~l~s~~-~d~~i~lwd~~~~~~----~-~------ 138 (349)
.+|++.....+. .+.+ ...+.+++|+|+|+++++++ .++.|++|++..... . .
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence 999987543221 1111 22358899999999766555 588999999875432 1 1
Q ss_pred -ceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce--EEeecC----CCCeeEEEEcCCCcEEEE-ec--CC
Q 018860 139 -REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI--VQTLET----KSPVTSAEVSQDGRYITT-AD--GS 208 (349)
Q Consensus 139 -~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~----~~~v~~~~~~~~~~~l~~-~~--d~ 208 (349)
.........+..++|+|++..+++++..++.|.+||+.+++. +..+.. ......+.|+|++++|.+ .. ++
T Consensus 203 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 111223445788999987777777776679999999987754 222322 234678999999998744 33 47
Q ss_pred eEEEEecC--Cce--eeEEEcCCCceEEeeecCCCCCEEEEec-CCCeEEEE--eCCCCcEEEEe-cCCCcceeEEEEc
Q 018860 209 TVKFWDAN--HFG--LVKSYNMPCTIESASLEPKYGNKFVAGG-EDMWVRFF--DFHTGNEIACN-KGHHGPVHCVRFS 279 (349)
Q Consensus 209 ~i~iwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~v~--d~~~~~~~~~~-~~h~~~i~~l~~s 279 (349)
.|.+|++. ++. .+..+.....+..++|+|+ ++++++++ .++.|.+| |..+++..... ..+...+.|++|.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spd-g~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPN-GKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCCEEEECTT-SCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEEEEcCCCCcEEEeeEecCCCCCceEEECCC-CCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 89999986 233 3444443345667889885 77666665 77899996 55566655433 2244578888885
No 158
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=1.7e-19 Score=162.15 Aligned_cols=267 Identities=13% Similarity=0.156 Sum_probs=177.8
Q ss_pred EEEEEecC--CCeEEEe--CCCCCeE--EEee-cccCCeEEEEECCCCCeeEEeeCCCeEEEEECC-CCCEEEEeccC--
Q 018860 33 FLISASKD--SSPMLRN--GETGDWI--GTFE-GHKGAVWSCCLDTNALRAASASADFSAKVWDAL-TGDVLHSFEHK-- 102 (349)
Q Consensus 33 ~l~s~s~d--~~i~iw~--~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~-~~~~~~~~~~~-- 102 (349)
+|+.|+.. +.|..|. .+++++. .... ++...+..++|+|++++|++++.+ .|++|++. +++......+.
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 45556553 3466654 4556542 2221 233467789999999999999988 99999987 77665443321
Q ss_pred CeEEEEEEcCCCCE--EEEEe-------------CCCeEEEEECCCCCCCCceec----cCCCCeEEEEEecCCCeEEEE
Q 018860 103 HIVRACSFSEDTHL--LLTGG-------------MEKILRIFDLNRPDAPPREVD----RSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 103 ~~v~~~~~s~~~~~--l~s~~-------------~d~~i~lwd~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~l~~ 163 (349)
.....++|+|+|++ ++++. .++.+++|++.........+. .+...+..++|+|++..++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 23455889999994 55553 689999999964332222222 234568899999877766655
Q ss_pred eeCCCeEEEEECC-CCceE--Eeec---CCCCeeEEEEcCCCcEEEE-ec-CCeEEEEecC--Cceee---EEEc-CC--
Q 018860 164 CTDMGGVRLWDVR-SGEIV--QTLE---TKSPVTSAEVSQDGRYITT-AD-GSTVKFWDAN--HFGLV---KSYN-MP-- 227 (349)
Q Consensus 164 ~~~dg~v~vwd~~-~~~~~--~~~~---~~~~v~~~~~~~~~~~l~~-~~-d~~i~iwd~~--~~~~~---~~~~-~~-- 227 (349)
...++.|++||+. +++.. ..+. +......+.|+|+++++.. .. ++.|.+|++. +++.. ..+. .+
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG 242 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCC
Confidence 5456799999998 77653 2333 2456788999999987754 33 6899999765 34432 1121 21
Q ss_pred ----C-------ceEEee-ecCCCCCEEEEecC-CC-----eEEEEeCC-CCcEEE---EecCCCcceeEEEEcc---CC
Q 018860 228 ----C-------TIESAS-LEPKYGNKFVAGGE-DM-----WVRFFDFH-TGNEIA---CNKGHHGPVHCVRFSP---GG 282 (349)
Q Consensus 228 ----~-------~~~~~~-~~~~~~~~~~~~~~-d~-----~i~v~d~~-~~~~~~---~~~~h~~~i~~l~~sp---~~ 282 (349)
. .+..++ ++|+ +++++++.. ++ .|++|++. +++... ....+...+..++|+| +|
T Consensus 243 ~~g~~~~~~~~~~~~~i~~~spd-G~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 243 IPDRDPETGKGLYRADVCALTFS-GKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp CCCBCTTTSSBSEEEEEEEECTT-SSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred cCCcccccccccccccEEEECCC-CCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC
Confidence 1 356788 8874 777766543 23 89999986 565433 2334555677899999 89
Q ss_pred CeEEEecCC-CCEEEecCCC
Q 018860 283 ESYASGSED-GTIRIWQTGP 301 (349)
Q Consensus 283 ~~l~sgs~D-g~v~vW~~~~ 301 (349)
++|++++.+ ++|++|+++.
T Consensus 322 ~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp TEEEEECSSSCEEEEEEEET
T ss_pred CEEEEEEcCCCeEEEEEEch
Confidence 999988765 8999998753
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=1.2e-19 Score=164.04 Aligned_cols=280 Identities=13% Similarity=0.060 Sum_probs=188.7
Q ss_pred ccCCCceee-----EEEeecCCCccEEEEEec-CCC--eEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCe
Q 018860 13 HGHSRPVVD-----LFYSPITPDGFFLISASK-DSS--PMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFS 84 (349)
Q Consensus 13 ~gh~~~v~~-----~~fs~~~~~~~~l~s~s~-d~~--i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 84 (349)
..|...+.. .+||| ||++|+.++. ++. +.+|+..+++......+|...+..++|+||++.|+.++.++.
T Consensus 27 t~~~~~~~~~~~~~~~~Sp---Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~ 103 (388)
T 3pe7_A 27 TPPDVTCHRNYFYQKCFTR---DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRN 103 (388)
T ss_dssp SCTTSCEECCCTTSCCBCT---TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTE
T ss_pred cCCcccccchhhcCccCCC---CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCe
Confidence 445544444 66775 9999999887 675 667788888887777778777667889999999999999999
Q ss_pred EEEEECCCCCEEEEecc-CCeEEEE--EEcCCCCEEEEE----------------------eCCCeEEEEECCCCCCCCc
Q 018860 85 AKVWDALTGDVLHSFEH-KHIVRAC--SFSEDTHLLLTG----------------------GMEKILRIFDLNRPDAPPR 139 (349)
Q Consensus 85 i~vWd~~~~~~~~~~~~-~~~v~~~--~~s~~~~~l~s~----------------------~~d~~i~lwd~~~~~~~~~ 139 (349)
|++||+.+++....+.. ...+... .++|++.+++.. +.+..|.+||+.+.+ .+
T Consensus 104 l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~ 181 (388)
T 3pe7_A 104 LMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--ST 181 (388)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--EE
T ss_pred EEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--eE
Confidence 99999999987766553 3344333 348999988742 245678899987643 23
Q ss_pred eeccCCCCeEEEEEec-CCCeEEEEeeC-----CCeEEEEECCCCceEEeecCC--CCeeEEEEcCCCcEE-EEec--CC
Q 018860 140 EVDRSPGSVRTVAWLH-SDQTILSTCTD-----MGGVRLWDVRSGEIVQTLETK--SPVTSAEVSQDGRYI-TTAD--GS 208 (349)
Q Consensus 140 ~~~~~~~~i~~~~~~~-~~~~~l~~~~~-----dg~v~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l-~~~~--d~ 208 (349)
.+..+...+..+.|+| ++..++.+... ...|.++|+..+......... ..+....|+|||+.| ..+. +.
T Consensus 182 ~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (388)
T 3pe7_A 182 VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGS 261 (388)
T ss_dssp EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTC
T ss_pred EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCC
Confidence 3444556788899998 65555544432 237888888766544333333 246778999999855 3332 22
Q ss_pred ---eEEEEecCCceeeEEEcCCCc------eEEeeecCCCCCEEEEe---------cCCCeEEEEeCCCCcEEEEecCCC
Q 018860 209 ---TVKFWDANHFGLVKSYNMPCT------IESASLEPKYGNKFVAG---------GEDMWVRFFDFHTGNEIACNKGHH 270 (349)
Q Consensus 209 ---~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~---------~~d~~i~v~d~~~~~~~~~~~~h~ 270 (349)
.|.+||+.+++.......+.. .....|+|+ ++.++.. ..+..|++||+.+++.. .+..|.
T Consensus 262 ~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~ 339 (388)
T 3pe7_A 262 PDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGD-GSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH-RVARHD 339 (388)
T ss_dssp CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEE-ECCC------------CCCCEEEEEETTTTEEE-EEEECC
T ss_pred CcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccC-CCcceeEeeeccccccCCCCEEEEEeccCCceE-Eecccc
Confidence 399999988764433222210 111256664 5555532 55679999999887653 344444
Q ss_pred c-----------ceeEEEEccCCCeEEEec-CCCCEEEecC
Q 018860 271 G-----------PVHCVRFSPGGESYASGS-EDGTIRIWQT 299 (349)
Q Consensus 271 ~-----------~i~~l~~sp~~~~l~sgs-~Dg~v~vW~~ 299 (349)
. .+.+++|+|+|+.|+..+ .+|...||.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 340 TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 4 578899999999887544 6788888864
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=6.5e-20 Score=168.53 Aligned_cols=210 Identities=13% Similarity=0.079 Sum_probs=150.8
Q ss_pred CCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCC-----------C-----EEEEeccCCe
Q 018860 41 SSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-----------D-----VLHSFEHKHI 104 (349)
Q Consensus 41 ~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~-----------~-----~~~~~~~~~~ 104 (349)
+.+++|+... . .+...+..+++++++.++++++.|+ +++|+.... . ....+.+...
T Consensus 23 ~~vri~~~~~-~------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPE-E------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCS-S------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCcc-c------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 4578876431 1 2344578899999999999999988 999874210 1 1123445677
Q ss_pred EEEEEEcCCCCEEE----EEeCCCeEEEEECCCC-----CC--C---CceeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 018860 105 VRACSFSEDTHLLL----TGGMEKILRIFDLNRP-----DA--P---PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 105 v~~~~~s~~~~~l~----s~~~d~~i~lwd~~~~-----~~--~---~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
|++++|+|++++|+ +|+.|+.|++||+... .. . ...+.+|...|.+++|+|.++.++++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 99999999999999 8899999999998643 11 1 123455788999999999878888889999999
Q ss_pred EEEECCCCceEEee-cCCCCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCC--------CceEEeeecCCCC
Q 018860 171 RLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMP--------CTIESASLEPKYG 240 (349)
Q Consensus 171 ~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 240 (349)
++||++++...... .+...+.+++|+|++++|++ +.|++|++||++ ......+..+ ..+.++.|.+. .
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~-~ 252 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGT-Y 252 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEET-T
T ss_pred EEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecC-c
Confidence 99999988665443 34568999999999987755 569999999998 4444443221 25677888773 3
Q ss_pred CEEEE-ecCCC------eEEEEeCCCC
Q 018860 241 NKFVA-GGEDM------WVRFFDFHTG 260 (349)
Q Consensus 241 ~~~~~-~~~d~------~i~v~d~~~~ 260 (349)
.++++ ...|| .+++|++...
T Consensus 253 ~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 253 VFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred eEEEEEccCCCccCCCCceEEEEeccC
Confidence 33332 33342 4899999764
No 161
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=3.8e-18 Score=153.06 Aligned_cols=266 Identities=12% Similarity=0.099 Sum_probs=181.9
Q ss_pred CccEEEEEe------cCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEee----------CCCeEEEEECCCC
Q 018860 30 DGFFLISAS------KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASAS----------ADFSAKVWDALTG 93 (349)
Q Consensus 30 ~~~~l~s~s------~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s----------~D~~i~vWd~~~~ 93 (349)
+++++.... .|+.+.+||..+++.+..+..+..+ .++|+||+++|.+++ .+++|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 566666553 4779999999999999999887766 899999999999886 3778999999999
Q ss_pred CEEEEecc-------CCeEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEe
Q 018860 94 DVLHSFEH-------KHIVRACSFSEDTHLLLTGGM--EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC 164 (349)
Q Consensus 94 ~~~~~~~~-------~~~v~~~~~s~~~~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~ 164 (349)
+.+..+.. ......++|+|+|++|+++.. ++.|.+||+.+.+. ...+....+ ...+.+.|.+...+++.
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~-~~~~i~~~~-~~~v~~~p~~~~~~~~~ 169 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDY-VEDVTAAAG-CWSVIPQPNRPRSFMTI 169 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEE-EEEEGGGTT-EEEEEECTTSSSEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcE-EEEEecCCC-cceeEEcCCCCeeEEEE
Confidence 88877652 234567899999999998874 68899999976432 112011222 22244566665566667
Q ss_pred eCCCeEEEEECCC-CceEEee------cCCCCeeEEEEcCCCc-EEEEecCCeEEEEecCCce--eeEEEcC--------
Q 018860 165 TDMGGVRLWDVRS-GEIVQTL------ETKSPVTSAEVSQDGR-YITTADGSTVKFWDANHFG--LVKSYNM-------- 226 (349)
Q Consensus 165 ~~dg~v~vwd~~~-~~~~~~~------~~~~~v~~~~~~~~~~-~l~~~~d~~i~iwd~~~~~--~~~~~~~-------- 226 (349)
+.||.+.+|+... ++..... ........+.+++++. ++..+.++.+.++|+.... ....+..
T Consensus 170 ~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
T 2oiz_A 170 CGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAK 249 (361)
T ss_dssp ETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHT
T ss_pred CCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccc
Confidence 7779999999865 5544211 1111111222345553 3445567889999986443 2222211
Q ss_pred ---CCceEEeeecCCCCCEEEEec----------CCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCC
Q 018860 227 ---PCTIESASLEPKYGNKFVAGG----------EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGT 293 (349)
Q Consensus 227 ---~~~~~~~~~~~~~~~~~~~~~----------~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~ 293 (349)
+.....++++|..+..+++.. ..+.|.+||+.+++.+..+..+. +.+++|+|+|++|++++. ++
T Consensus 250 ~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~ 326 (361)
T 2oiz_A 250 NWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GN 326 (361)
T ss_dssp TCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SC
T ss_pred ccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-Ce
Confidence 111122577775334444433 14589999999999999988776 899999999999998887 99
Q ss_pred EEEecCCCC
Q 018860 294 IRIWQTGPV 302 (349)
Q Consensus 294 v~vW~~~~~ 302 (349)
|.+||+...
T Consensus 327 v~v~D~~t~ 335 (361)
T 2oiz_A 327 VNVYDISQP 335 (361)
T ss_dssp EEEEECSSS
T ss_pred EEEEECCCC
Confidence 999998654
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=2.5e-19 Score=175.04 Aligned_cols=274 Identities=9% Similarity=0.045 Sum_probs=184.1
Q ss_pred ceeeEEEeecCCCccEEEEEec---------CCCeEEEeCCCCCeE--EEeecccCCeEEEEECCCCCeeEEeeCCCeEE
Q 018860 18 PVVDLFYSPITPDGFFLISASK---------DSSPMLRNGETGDWI--GTFEGHKGAVWSCCLDTNALRAASASADFSAK 86 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~---------d~~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 86 (349)
.|.+++||| ||++|+.++. |+.+++|+..+++.+ ..+ ...+..++|+|||++|+.++ |+.|+
T Consensus 61 ~~~~~~~Sp---Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~ 133 (719)
T 1z68_A 61 NASNYGLSP---DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIY 133 (719)
T ss_dssp TCSEEEECT---TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEE
T ss_pred ceeeEEECC---CCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEE
Confidence 388999997 9999999887 789999999888763 223 24688899999999999886 78999
Q ss_pred EEECCCCCEEEEec--cCCeE-----------------EEEEEcCCCCEEEEEeCCC-----------------------
Q 018860 87 VWDALTGDVLHSFE--HKHIV-----------------RACSFSEDTHLLLTGGMEK----------------------- 124 (349)
Q Consensus 87 vWd~~~~~~~~~~~--~~~~v-----------------~~~~~s~~~~~l~s~~~d~----------------------- 124 (349)
+|++.+++...... +...| .+++|+|||+.|++++.|.
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 99998887654332 22222 4899999999999988652
Q ss_pred -----------eEEEEECCCCCCC----C---ceeccCCCCeEEEEEecCCCeEEEEeeCC----CeEEEEE----CCCC
Q 018860 125 -----------ILRIFDLNRPDAP----P---REVDRSPGSVRTVAWLHSDQTILSTCTDM----GGVRLWD----VRSG 178 (349)
Q Consensus 125 -----------~i~lwd~~~~~~~----~---~~~~~~~~~i~~~~~~~~~~~~l~~~~~d----g~v~vwd----~~~~ 178 (349)
.|++||+.+.... . ..+..+...+..++|+|+ +.++++..+. ..|.+|| +.++
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTD-ERVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSS-SEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCC-CeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 7889998754320 0 112346667899999987 5666654332 2488999 8887
Q ss_pred ceEEeec----C-CCCee-----EEEEcCCCcEEE--Ee-cCC--eEEEEecCCceeeEEEcCCCceEEeeecCCCCCEE
Q 018860 179 EIVQTLE----T-KSPVT-----SAEVSQDGRYIT--TA-DGS--TVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKF 243 (349)
Q Consensus 179 ~~~~~~~----~-~~~v~-----~~~~~~~~~~l~--~~-~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (349)
++...+. . ...+. .+.|+|||+.++ ++ .++ .|.+||+.+............+..+.+. +++.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~--d~~~i 370 (719)
T 1z68_A 293 DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV--TQDSL 370 (719)
T ss_dssp ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE--CSSEE
T ss_pred ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE--eCCEE
Confidence 7655442 2 23344 678999998432 33 344 5777888766533222223334444444 35555
Q ss_pred EEecC-----CCeEEEEeCCC--Cc-EEEEec----CCCcceeEEEEccCCCeEE-EecCC--CCEEEecCCC
Q 018860 244 VAGGE-----DMWVRFFDFHT--GN-EIACNK----GHHGPVHCVRFSPGGESYA-SGSED--GTIRIWQTGP 301 (349)
Q Consensus 244 ~~~~~-----d~~i~v~d~~~--~~-~~~~~~----~h~~~i~~l~~sp~~~~l~-sgs~D--g~v~vW~~~~ 301 (349)
+..+. ++..++|.+.. +. ....+. +|...+..+.|+|++++++ +++.+ ..+.+|++..
T Consensus 371 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~ 443 (719)
T 1z68_A 371 FYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRT 443 (719)
T ss_dssp EEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSS
T ss_pred EEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCC
Confidence 55444 47788887653 32 123333 3667788999999998776 44444 3578887643
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=8.1e-17 Score=142.50 Aligned_cols=236 Identities=16% Similarity=0.148 Sum_probs=178.4
Q ss_pred CCeEEEEECCCCCeeEEeeCC------------------------CeEEEEECCCCCEEEEecc--CCeEEEEEEcCCCC
Q 018860 62 GAVWSCCLDTNALRAASASAD------------------------FSAKVWDALTGDVLHSFEH--KHIVRACSFSEDTH 115 (349)
Q Consensus 62 ~~v~~~~~~~~~~~l~s~s~D------------------------~~i~vWd~~~~~~~~~~~~--~~~v~~~~~s~~~~ 115 (349)
+.+.+++++++++++++.+.+ +.|.+||..+++.+..+.. -.....++++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 568899999999988888877 4799999998988777652 34688999999999
Q ss_pred EEEEEeCCCeEEEEECCCCCCCCcee---------ccCCCCeEEEEEecCCCeEEEEee-CCCeEEEEECCCCceEEeec
Q 018860 116 LLLTGGMEKILRIFDLNRPDAPPREV---------DRSPGSVRTVAWLHSDQTILSTCT-DMGGVRLWDVRSGEIVQTLE 185 (349)
Q Consensus 116 ~l~s~~~d~~i~lwd~~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~ 185 (349)
++++...++.|++|+..........+ ..+......+++.+.++.++++.+ .++.|++|| .+++.+..+.
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~ 182 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWG 182 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEEC
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEec
Confidence 99988889999999975432122222 223346789999885666776665 578999999 5677666653
Q ss_pred CC-----------CCeeEEEEcCC-CcEEEEe-cCCeEEEEecCCceeeEEEcCC---CceEEeeecCCCCCEEEEe---
Q 018860 186 TK-----------SPVTSAEVSQD-GRYITTA-DGSTVKFWDANHFGLVKSYNMP---CTIESASLEPKYGNKFVAG--- 246 (349)
Q Consensus 186 ~~-----------~~v~~~~~~~~-~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--- 246 (349)
.. .....++++|+ +.++++. .++.|++||..+++.+..+..+ ..+..+++.| +..+.+.
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~ 260 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP--GFLFAVNGKP 260 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET--TEEEEEECCC
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC--CEEEEeCCCE
Confidence 21 12678999998 6666554 4789999999877777776432 3456677776 3333333
Q ss_pred ----cCCCeEEEEeCCCCcEEEEe---cCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 247 ----GEDMWVRFFDFHTGNEIACN---KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 247 ----~~d~~i~v~d~~~~~~~~~~---~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
..+..|++||..+++.+..+ .++...+..++++|+|.++++.+.++.|++|++.
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 34558999999999988876 4677789999999999888899999999999864
No 164
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=2.1e-18 Score=169.06 Aligned_cols=275 Identities=9% Similarity=0.010 Sum_probs=182.1
Q ss_pred CCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCe-----EEEEECCCCCeeEEeeCC--------
Q 018860 16 SRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAV-----WSCCLDTNALRAASASAD-------- 82 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~l~s~s~D-------- 82 (349)
......+.|+| ||++++++ |++|++|+..+++....+.+|.... ..++|+||+++|+.++.+
T Consensus 16 ~~~~~~~~w~~---dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 16 RLKLYSLRWIS---DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCCCEEECS---SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccccccEECC---CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 34466888987 89999886 9999999999999888888887542 347889999999999887
Q ss_pred -CeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCe-------------
Q 018860 83 -FSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV------------- 148 (349)
Q Consensus 83 -~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i------------- 148 (349)
+.+.+||+.+++......+...+...+|||||+.|+.+. |+.|.+|++...........++...+
T Consensus 91 ~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred ceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 556699999998765555677899999999999998875 68899999875442211112222212
Q ss_pred ----EEEEEecCCCeEEEEeeCCC-----------------------------------eEEEEECCC---C---ceEEe
Q 018860 149 ----RTVAWLHSDQTILSTCTDMG-----------------------------------GVRLWDVRS---G---EIVQT 183 (349)
Q Consensus 149 ----~~~~~~~~~~~~l~~~~~dg-----------------------------------~v~vwd~~~---~---~~~~~ 183 (349)
.++.|+|++..++....+++ +|++||+.+ + +....
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 35889988777766543322 588899988 7 33222
Q ss_pred ec------CCCCeeEEEEcCCCcEEEEe-c----CCeEEEEecCCce----ee--E-E--EcCCCc-----eEEeeecCC
Q 018860 184 LE------TKSPVTSAEVSQDGRYITTA-D----GSTVKFWDANHFG----LV--K-S--YNMPCT-----IESASLEPK 238 (349)
Q Consensus 184 ~~------~~~~v~~~~~~~~~~~l~~~-~----d~~i~iwd~~~~~----~~--~-~--~~~~~~-----~~~~~~~~~ 238 (349)
.. +...+..+.|+||+++++.. . +..|.+||+.++. +. . . -....- .....|+|+
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC
Confidence 11 23357889999999865432 1 2379999988765 11 1 1 111111 225678875
Q ss_pred CCCEEE-Eec-CC--CeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEE-EecC----CCCEEEecC
Q 018860 239 YGNKFV-AGG-ED--MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYA-SGSE----DGTIRIWQT 299 (349)
Q Consensus 239 ~~~~~~-~~~-~d--~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~-sgs~----Dg~v~vW~~ 299 (349)
++.++ ..+ .+ ..|++||..+++... +......+..+. .++++.|+ +++. .+..+||.+
T Consensus 330 -G~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 330 -GNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp -SSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred -CCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEEE
Confidence 66655 554 33 478889988766543 333344555543 24566554 5544 344556543
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.82 E-value=5.5e-18 Score=152.23 Aligned_cols=242 Identities=10% Similarity=0.081 Sum_probs=166.0
Q ss_pred CCCceeeEEEeecCCCccEEEEEecCCCeEEEeCC-CCCeEEEeecc-cCCeEEEEECCCCCe--eEEee----------
Q 018860 15 HSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGE-TGDWIGTFEGH-KGAVWSCCLDTNALR--AASAS---------- 80 (349)
Q Consensus 15 h~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~-~~~~~~~~~~h-~~~v~~~~~~~~~~~--l~s~s---------- 80 (349)
+...+..++|+| +|++|++++.+ .+.+|+.. ++++....... .+...+++|+|++++ +++++
T Consensus 38 ~~~~~~~~a~sp---dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 38 QDEPISWMTFDH---ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp TTCCCSEEEECT---TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCCCcEEEECC---CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 445678899986 89999999988 89999986 77665433211 123556899999994 55664
Q ss_pred ---CCCeEEEEECC-CCCEEEEec-----cCCeEEEEEEcCCCCEEEEEe-CCCeEEEEECC-CCCCCC-ceec--cCCC
Q 018860 81 ---ADFSAKVWDAL-TGDVLHSFE-----HKHIVRACSFSEDTHLLLTGG-MEKILRIFDLN-RPDAPP-REVD--RSPG 146 (349)
Q Consensus 81 ---~D~~i~vWd~~-~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~-~d~~i~lwd~~-~~~~~~-~~~~--~~~~ 146 (349)
.++++++|++. .++....+. +...+..++|+|+|++++++. .++.|++|++. +.+... ..+. .+..
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 69999999987 466544332 446789999999999888765 46799999997 332211 1122 1245
Q ss_pred CeEEEEEecCCCeEEEEeeCCCeEEEEECC--CCceE---Eee---cCC----C-------CeeEEE-EcCCCcEEEEec
Q 018860 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVR--SGEIV---QTL---ETK----S-------PVTSAE-VSQDGRYITTAD 206 (349)
Q Consensus 147 ~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~--~~~~~---~~~---~~~----~-------~v~~~~-~~~~~~~l~~~~ 206 (349)
.+..++|+|++..++++...++.|.+|++. +++.. ..+ ... . .+..+. ++|||++|.++.
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 688999998877776666667899999764 56542 122 211 1 367899 999998875442
Q ss_pred --CC-----eEEEEecC-CceeeEE---Ec-CCCceEEeeecCC--CCCEEEEecC-CCeEEEEeCCCC
Q 018860 207 --GS-----TVKFWDAN-HFGLVKS---YN-MPCTIESASLEPK--YGNKFVAGGE-DMWVRFFDFHTG 260 (349)
Q Consensus 207 --d~-----~i~iwd~~-~~~~~~~---~~-~~~~~~~~~~~~~--~~~~~~~~~~-d~~i~v~d~~~~ 260 (349)
++ .|.+|++. +++.... .. ....+..++++|. +++++++++. ++.|++|++...
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 33 89999986 4444331 22 2234556778885 5788888775 589999998765
No 166
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=4e-17 Score=144.39 Aligned_cols=266 Identities=14% Similarity=0.058 Sum_probs=185.3
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEE
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVL 96 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~ 96 (349)
..|.++.|+| ++..+++.+.++.++.|. ++....+..+...+.+++|++++++++++..++.|.+||..+++..
T Consensus 6 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSG---KSNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCG---GGGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecC---CccceeEEeecccCcccc---cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 3467888887 566677778888999993 4566677777778899999999998888888999999999988776
Q ss_pred EEe-ccCCeEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCCCCCceec--cCCCCeEEEEEecCCCeEEEEeeC---
Q 018860 97 HSF-EHKHIVRACSFSEDTHLLLTGGME----KILRIFDLNRPDAPPREVD--RSPGSVRTVAWLHSDQTILSTCTD--- 166 (349)
Q Consensus 97 ~~~-~~~~~v~~~~~s~~~~~l~s~~~d----~~i~lwd~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~--- 166 (349)
... .+...+.+++++|+++++++...+ +.|.+||....... ..+. .....+..+.+.+++. ++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~ 157 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ-DIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYS 157 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE-EEECSSSSCCCEEEEEECTTSC-EEEEECCCBT
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE-EEEccCccCCcccceEECCCCC-EEEEeccccc
Confidence 654 456789999999999988877666 68999998654321 1111 2334688899887654 4444432
Q ss_pred ---CCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEE-EEe-cCCeEEEEecCC-ceeeEE------EcCC--CceEE
Q 018860 167 ---MGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYI-TTA-DGSTVKFWDANH-FGLVKS------YNMP--CTIES 232 (349)
Q Consensus 167 ---dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~-~d~~i~iwd~~~-~~~~~~------~~~~--~~~~~ 232 (349)
.+.|..+|..+++.............+.++|+++.+ ++. .++.|.+||+.+ ...... .... ..+..
T Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~ 237 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDS 237 (333)
T ss_dssp TBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEE
T ss_pred cCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCc
Confidence 356777777665544333333346789999999754 333 468999999863 222211 1111 24566
Q ss_pred eeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCc------ceeEEEEccCCCeEEEecCCC
Q 018860 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHG------PVHCVRFSPGGESYASGSEDG 292 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~------~i~~l~~sp~~~~l~sgs~Dg 292 (349)
+++.+. ++.+++...++.|++||. .++.+..+..+.. .+.+++|+|+++.|+.++.++
T Consensus 238 i~~d~~-G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 238 CCIDSD-DNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEBTT-CCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred eEECCC-CCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 777764 777777777899999998 4666655543332 689999999987776555443
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.81 E-value=9.4e-18 Score=162.32 Aligned_cols=281 Identities=11% Similarity=-0.026 Sum_probs=187.5
Q ss_pred eccCCCceeeEEEeecCCCccEEEEE--ecCCCeEEEeCCCCCeEEEeecccCCeE---------EEEEC--CCCCe-eE
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISA--SKDSSPMLRNGETGDWIGTFEGHKGAVW---------SCCLD--TNALR-AA 77 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~--s~d~~i~iw~~~~~~~~~~~~~h~~~v~---------~~~~~--~~~~~-l~ 77 (349)
+.+|...|..+.|++ ++.++++. +.++..++|....+...+.+..|...+. ...|+ ||+++ |+
T Consensus 19 ~~~~~~~~~~~~~s~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 19 VASRSGRPACVGAVG---DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHTCSCCEEEEEET---TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HhhcCCccceeEEcC---CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 458999999999995 66677766 5578899998544455667777766665 56555 99998 66
Q ss_pred EeeC-CCeEEEEECC--C-CCEEEEec-----cCCeEEEEEEcCCCCEEEEEeCC----------CeEEEEECCCCC---
Q 018860 78 SASA-DFSAKVWDAL--T-GDVLHSFE-----HKHIVRACSFSEDTHLLLTGGME----------KILRIFDLNRPD--- 135 (349)
Q Consensus 78 s~s~-D~~i~vWd~~--~-~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~~d----------~~i~lwd~~~~~--- 135 (349)
.++. +..|.+|++. + ++...... |...+..++|+|||+.|+.++.+ ..|.+||+....
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 5553 5667777776 3 54433333 45678899999999999998876 579999987621
Q ss_pred -CCCceec-cCCCCeEEEEEecCCCeEEEEeeCC-------CeEEEEECC-CC---ceEEeecC-CCCeeEEEEcCCCcE
Q 018860 136 -APPREVD-RSPGSVRTVAWLHSDQTILSTCTDM-------GGVRLWDVR-SG---EIVQTLET-KSPVTSAEVSQDGRY 201 (349)
Q Consensus 136 -~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~d-------g~v~vwd~~-~~---~~~~~~~~-~~~v~~~~~~~~~~~ 201 (349)
...+.+. .+...+..+.|+|++..++.++.+. ..|++||+. ++ +....... ...+..+.|+|||++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 1123333 4445677788998777776665442 479999998 57 44333333 456889999999997
Q ss_pred EEEec-CC--eEEEEecCCceeeEEEcCCCc---------eEEeeecCCCCCEEEEecCCCeEEEE--eCCCCcEEEEec
Q 018860 202 ITTAD-GS--TVKFWDANHFGLVKSYNMPCT---------IESASLEPKYGNKFVAGGEDMWVRFF--DFHTGNEIACNK 267 (349)
Q Consensus 202 l~~~~-d~--~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~d~~i~v~--d~~~~~~~~~~~ 267 (349)
+++++ ++ .|.+||+.+............ ...+++.+ +++.++++.. +.+++| |+.+++ +..+.
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~ 332 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGE-LVDAA 332 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTE-EEECC
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCc-EEEec
Confidence 66654 56 667777656554433322211 23455555 4778888888 888888 555554 66777
Q ss_pred CCCcceeEE-EEccCCCeEEEecCCCCEEEec
Q 018860 268 GHHGPVHCV-RFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 268 ~h~~~i~~l-~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
.|...+..+ +++++.-.+++++.+....+|.
T Consensus 333 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 333 GPWTEWAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 787778777 5543333445666666555553
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=2.4e-18 Score=155.50 Aligned_cols=273 Identities=13% Similarity=0.054 Sum_probs=179.2
Q ss_pred eeeEEEeecCCCccEEEEEecC-C--CeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCE
Q 018860 19 VVDLFYSPITPDGFFLISASKD-S--SPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDV 95 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d-~--~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~ 95 (349)
+..++||| ||++|+..+.. + .+.+|+..+++......++......+.|+||+++|+.++.++.|++||+.+++.
T Consensus 38 ~~~~~~Sp---dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQ---DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCT---TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCC---CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 67788886 99998777553 3 567778887766544444433333478999999999999999999999998886
Q ss_pred EEEec-cCCeEEE-------------------EEEcCCCCEEEEE-----eCCCeEEEEECCCCCCCCceeccCCCCeEE
Q 018860 96 LHSFE-HKHIVRA-------------------CSFSEDTHLLLTG-----GMEKILRIFDLNRPDAPPREVDRSPGSVRT 150 (349)
Q Consensus 96 ~~~~~-~~~~v~~-------------------~~~s~~~~~l~s~-----~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~ 150 (349)
..... +...... +.|+|+++.++.. ..+..|.+||+..... ..+..+...+..
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~~~~~~~~~~~ 192 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL--EVIHQDTAWLGH 192 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE--EEEEEESSCEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE--EeeccCCccccc
Confidence 65554 2222222 3567787776654 4567889999875432 223344567888
Q ss_pred EEEec-CCCeEEEEeeCC-----CeEEEEECCCCceEEeecCC--CCeeEEEEcCCCcEEE-EecC-----CeEEEEecC
Q 018860 151 VAWLH-SDQTILSTCTDM-----GGVRLWDVRSGEIVQTLETK--SPVTSAEVSQDGRYIT-TADG-----STVKFWDAN 216 (349)
Q Consensus 151 ~~~~~-~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~-~~~d-----~~i~iwd~~ 216 (349)
+.|+| ++..++...... ..|.+||+..++........ ..+..+.|+|+++.|+ ++.+ +.|.+||+.
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 99998 444454443321 36889998766543333321 2467789999998654 3322 349999998
Q ss_pred CceeeEEEcCCCceEEeeecCCCCCEEEEec----------------CCCeEEEEeCCCCcEEEEecCCCc---------
Q 018860 217 HFGLVKSYNMPCTIESASLEPKYGNKFVAGG----------------EDMWVRFFDFHTGNEIACNKGHHG--------- 271 (349)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~d~~i~v~d~~~~~~~~~~~~h~~--------- 271 (349)
+.+.......+. .. ..|+|.+++.+++++ .+..|++||+.+++.. .+..+..
T Consensus 273 ~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~ 349 (396)
T 3c5m_A 273 TLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDR 349 (396)
T ss_dssp TCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBS
T ss_pred CCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccc
Confidence 776544433332 22 677773577777654 3478999999877643 3333433
Q ss_pred --ceeEEEEccCCCeEEEec-CCCCEEEecC
Q 018860 272 --PVHCVRFSPGGESYASGS-EDGTIRIWQT 299 (349)
Q Consensus 272 --~i~~l~~sp~~~~l~sgs-~Dg~v~vW~~ 299 (349)
.+..++|+|+|+.|+.++ .++...||.+
T Consensus 350 ~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 350 QITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp STTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred cCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 256789999999887655 4667777754
No 169
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=1.6e-17 Score=147.31 Aligned_cols=242 Identities=14% Similarity=0.102 Sum_probs=162.7
Q ss_pred ceeeEEEeecCCCccEE-EEEecCCCeEEEeCCCCCeEEEeeccc------CCeEEEEECCCCCeeEEeeCC--------
Q 018860 18 PVVDLFYSPITPDGFFL-ISASKDSSPMLRNGETGDWIGTFEGHK------GAVWSCCLDTNALRAASASAD-------- 82 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l-~s~s~d~~i~iw~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~l~s~s~D-------- 82 (349)
.+..++|+| +|+++ ++...++.+.+|+..+++.+..+..+. ..+..++|+|++++|++++.+
T Consensus 44 ~~~~~~~s~---dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 44 GPGTAMMAP---DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SSCEEEECT---TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CCceeEECC---CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 467888986 88765 455678899999999998887776432 337789999999999998876
Q ss_pred ----CeEEEEECCCCC---EEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCC----------
Q 018860 83 ----FSAKVWDALTGD---VLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSP---------- 145 (349)
Q Consensus 83 ----~~i~vWd~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~---------- 145 (349)
+.|.+||+.+++ .+..+.++..+.+++|+|+++ +++++.+ |.+||+.+.+.. ..+....
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~~--i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 196 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGPD--IYKMDVKTGKYT-VALPLRNWNRKGYSAPD 196 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESSS--EEEECTTTCCEE-EEECSTTCCCTTBCCCB
T ss_pred ccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccCc--EEEEeCCCCcee-ccccccccCCccccCcc
Confidence 999999998743 344555666788999999999 5555444 999998654321 1111110
Q ss_pred ----------C----CeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEE-ee-cCCCCeeEEEEcC-CCcEEEEecCC
Q 018860 146 ----------G----SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQ-TL-ETKSPVTSAEVSQ-DGRYITTADGS 208 (349)
Q Consensus 146 ----------~----~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~-~~-~~~~~v~~~~~~~-~~~~l~~~~d~ 208 (349)
. ....+.+.+++............+..+|..+++... .+ ........+.++| +++++.++ ++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~ 275 (349)
T 1jmx_B 197 VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LN 275 (349)
T ss_dssp CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ES
T ss_pred ceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cC
Confidence 0 122334432211100000010122234555443211 11 1334577889999 99988777 88
Q ss_pred eEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecC
Q 018860 209 TVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG 268 (349)
Q Consensus 209 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~ 268 (349)
.|.+||+.+.+.+..+.....+..++++|. ++++++++.++.|++||+.+++.+..+..
T Consensus 276 ~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 276 RLAKYDLKQRKLIKAANLDHTYYCVAFDKK-GDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECSS-SSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECccCeEEEEEcCCCCccceEECCC-CCEEEEecCCCeEEEEeccccceeeeeec
Confidence 999999999988888777666778899885 66677788889999999999888776643
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=2.4e-16 Score=136.39 Aligned_cols=236 Identities=11% Similarity=0.149 Sum_probs=159.6
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEee------cccCCeEEEEE-CCCCCeeEEeeC-CCeE
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE------GHKGAVWSCCL-DTNALRAASASA-DFSA 85 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~------~h~~~v~~~~~-~~~~~~l~s~s~-D~~i 85 (349)
||...+.+++++| +|+++++.+.++.|.+|+.. ++.+..+. +|...+..+++ ++++..+++... ++.|
T Consensus 27 g~~~~p~~v~~~~---~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNA---QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECT---TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECC---CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 5667788999986 78888888889999999976 66666664 34567889999 577776666643 8999
Q ss_pred EEEECCCCCEEEEec--cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceec--cCCCCeEEEEEecCCCeEE
Q 018860 86 KVWDALTGDVLHSFE--HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVD--RSPGSVRTVAWLHSDQTIL 161 (349)
Q Consensus 86 ~vWd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l 161 (349)
++|| .+++.+..+. +...+..+++.|+|+++++...++.|.+||.... ....+. .+...+..+++.++ +.++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~~~p~~i~~~~~-g~l~ 178 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN--VLHKFGCSKHLEFPNGVVVNDK-QEIF 178 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC--EEEEEECTTTCSSEEEEEECSS-SEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC--EEEEeCCCCccCCcEEEEECCC-CCEE
Confidence 9999 5677776664 3356899999999998888888899999996421 112221 23346788988765 4566
Q ss_pred EEeeCCCeEEEEECCCCceEEeecCC---CCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcCCCceEEeeecCC
Q 018860 162 STCTDMGGVRLWDVRSGEIVQTLETK---SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPK 238 (349)
Q Consensus 162 ~~~~~dg~v~vwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (349)
++...++.|++||.. ++.+..+... .....++++++++++++
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~---------------------------------- 223 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIA---------------------------------- 223 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEE----------------------------------
T ss_pred EEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEE----------------------------------
Confidence 666666899999974 4444444322 23445555555554443
Q ss_pred CCCEEEEecCCC-eEEEEeCCCCcEEEEecCC--CcceeEEEEccCCCeEEEecCCCCEEEecCCC
Q 018860 239 YGNKFVAGGEDM-WVRFFDFHTGNEIACNKGH--HGPVHCVRFSPGGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 239 ~~~~~~~~~~d~-~i~v~d~~~~~~~~~~~~h--~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
...++ .|++||. +++.+..+..+ ...+.+++++|+|+++++ +.|++|++|+...
T Consensus 224 -------~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 224 -------DNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp -------ECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred -------eCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 33332 4444442 22333222222 234678999999987777 5799999998744
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=1.2e-16 Score=143.19 Aligned_cols=261 Identities=11% Similarity=0.006 Sum_probs=183.7
Q ss_pred eccCCCceeeEEEeecCCCccEEEEEe----------cCCCeEEEeCCCCCeEEEeecc------cCCeEEEEECCCCCe
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISAS----------KDSSPMLRNGETGDWIGTFEGH------KGAVWSCCLDTNALR 75 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~ 75 (349)
+..+..+ .++|+| ||++|.+++ .++++.+||..+.+.+.++..+ ......++|+||+++
T Consensus 47 i~~g~~p--~i~~sp---dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 47 VPTAFNG--HVQVSN---DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EECCEEE--EEEECT---TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred ecCCCCC--ceEECC---CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 3445555 788987 999999886 3678999999999988888643 234567899999999
Q ss_pred eEEeeC--CCeEEEEECCCCCEEEE-eccCCeEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCCCC------ceeccCC
Q 018860 76 AASASA--DFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDT-HLLLTGGMEKILRIFDLNRPDAPP------REVDRSP 145 (349)
Q Consensus 76 l~s~s~--D~~i~vWd~~~~~~~~~-~~~~~~v~~~~~s~~~-~~l~s~~~d~~i~lwd~~~~~~~~------~~~~~~~ 145 (349)
|+++.. +++|.+||+.+++.+.. +..... ..+.+.|++ ..+++.+.|+.+.+|++....... ..+....
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~ 200 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKD 200 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTT
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCC
Confidence 998874 68999999999988888 765443 235567765 677888899999999875422211 0111111
Q ss_pred CCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce--EEeecC-----------CCCeeEEEEcCCCcEEEEe-c-----
Q 018860 146 GSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI--VQTLET-----------KSPVTSAEVSQDGRYITTA-D----- 206 (349)
Q Consensus 146 ~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~-----------~~~v~~~~~~~~~~~l~~~-~----- 206 (349)
.++ .+.+.+.+..++.. +.++.|.++|+..+.. ...+.. ......+.++|++..+... .
T Consensus 201 ~~~-~~~~~~~g~~~~~~-~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~ 278 (361)
T 2oiz_A 201 DPI-FIAPALDKDKAHFV-SYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKE 278 (361)
T ss_dssp SCB-CSCCEECSSEEEEE-BTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCT
T ss_pred Cce-EEEecccCCEEEEE-eCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCc
Confidence 111 11123344444433 3568999999875532 222211 0111236789997665432 2
Q ss_pred ------CCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCC--cEEEEecCCCcceeEEEE
Q 018860 207 ------GSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTG--NEIACNKGHHGPVHCVRF 278 (349)
Q Consensus 207 ------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~--~~~~~~~~h~~~i~~l~~ 278 (349)
...|.+||+.+.+.+..+.... +..++++|+ ++++++++. +.|.+||..++ +.+..+..+......+++
T Consensus 279 ~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spd-g~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 279 GTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQ-RNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp TCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETT-TTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred ccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCC-CCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEe
Confidence 2489999999999999888777 888999985 778887776 99999999999 888887667777889999
Q ss_pred ccCCC
Q 018860 279 SPGGE 283 (349)
Q Consensus 279 sp~~~ 283 (349)
+|+|.
T Consensus 356 ~p~G~ 360 (361)
T 2oiz_A 356 HPVGG 360 (361)
T ss_dssp CCCSC
T ss_pred cCCCC
Confidence 99986
No 172
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.77 E-value=4.5e-16 Score=137.63 Aligned_cols=255 Identities=12% Similarity=0.076 Sum_probs=183.3
Q ss_pred cCCCeEEEeCCCCCeEEEee----c--ccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcC
Q 018860 39 KDSSPMLRNGETGDWIGTFE----G--HKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSE 112 (349)
Q Consensus 39 ~d~~i~iw~~~~~~~~~~~~----~--h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~ 112 (349)
.++++.++|.++++.+..+. + .......+.++. ++..++...++.|.+||..+++.+..+........+++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC
Confidence 47899999999988766542 1 123356777753 5556666778999999999999988887667789999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCCCCCceeccCC-----CCeEEEEEecCCCeEEEEee-CCCeEEEEECCCCceEEeecC
Q 018860 113 DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSP-----GSVRTVAWLHSDQTILSTCT-DMGGVRLWDVRSGEIVQTLET 186 (349)
Q Consensus 113 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~ 186 (349)
++++.++...++.|.+||+.+.+.. ..+.... .....+++ .++.++++.. .++.|.+||+.+++....+..
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~-~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEIT-GYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEE-EEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEECCCCeEEEEECCCCeEE-EEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 9855555548999999998754321 1111111 13344555 4566666654 368999999999998888776
Q ss_pred CCCeeEEEEcCCCcEEEEec-C----------CeEEEEecCCceeeEEEcCC--CceEEeeecCCCCCEEEEecCCCeEE
Q 018860 187 KSPVTSAEVSQDGRYITTAD-G----------STVKFWDANHFGLVKSYNMP--CTIESASLEPKYGNKFVAGGEDMWVR 253 (349)
Q Consensus 187 ~~~v~~~~~~~~~~~l~~~~-d----------~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~ 253 (349)
......+.++|++++++++. + +.|.++|..+.+....+..+ ..+..++++|+ ++.++++.. .|.
T Consensus 171 g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d-~~~lyv~~~--~v~ 247 (328)
T 3dsm_A 171 GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGT-RDTLYWINN--DIW 247 (328)
T ss_dssp SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTT-SCEEEEESS--SEE
T ss_pred CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecC-CCEEEEEcc--EEE
Confidence 55557788999998877654 3 68999999998887777654 25778899885 566665544 899
Q ss_pred EEeCCCCcEEEE--ecCCCcceeEEEEcc-CCCeEEEe----cCCCCEEEecCC
Q 018860 254 FFDFHTGNEIAC--NKGHHGPVHCVRFSP-GGESYASG----SEDGTIRIWQTG 300 (349)
Q Consensus 254 v~d~~~~~~~~~--~~~h~~~i~~l~~sp-~~~~l~sg----s~Dg~v~vW~~~ 300 (349)
+||..+++.... +..+......++++| ++..+++. ..++.|.+|+..
T Consensus 248 ~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 248 RMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred EEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 999988775321 222245688999999 55556666 678999999976
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=5.4e-17 Score=156.97 Aligned_cols=275 Identities=10% Similarity=-0.007 Sum_probs=170.4
Q ss_pred eEEEeecCCCccE-EEEEec-CCCeEEEeCC--CCCeEEEeec-----ccCCeEEEEECCCCCeeEEeeCC---------
Q 018860 21 DLFYSPITPDGFF-LISASK-DSSPMLRNGE--TGDWIGTFEG-----HKGAVWSCCLDTNALRAASASAD--------- 82 (349)
Q Consensus 21 ~~~fs~~~~~~~~-l~s~s~-d~~i~iw~~~--~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~s~D--------- 82 (349)
...|+ .+|||++ |+.++. +..|.+++.. .......+.. |...+..++|+|||++|+.++.|
T Consensus 81 ~~~~~-~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGV-PRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEE-CCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred cceee-eecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 45454 1258888 665443 3344445544 2033445555 67778999999999999999887
Q ss_pred -CeEEEEECCC------CCEEEEe-ccCCeEEEEEEcCCCCEEEEEeCC--------CeEEEEECCCCC---CCCceecc
Q 018860 83 -FSAKVWDALT------GDVLHSF-EHKHIVRACSFSEDTHLLLTGGME--------KILRIFDLNRPD---APPREVDR 143 (349)
Q Consensus 83 -~~i~vWd~~~------~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d--------~~i~lwd~~~~~---~~~~~~~~ 143 (349)
..|++||+.+ ++..... .+...+..++|+|||++|+.++.+ ..|.+||+.... ........
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 6899999988 6665555 556778889999999999887755 379999987322 22223334
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCC--eEEEEECCCCceEEeecCCCC---------eeEEEEcCCCcEEEEecCCeEEE
Q 018860 144 SPGSVRTVAWLHSDQTILSTCTDMG--GVRLWDVRSGEIVQTLETKSP---------VTSAEVSQDGRYITTADGSTVKF 212 (349)
Q Consensus 144 ~~~~i~~~~~~~~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~d~~i~i 212 (349)
+...+..+.|+|++. +++++..++ .|.+||+.+++.......... +..+.++|++++++++..+.+++
T Consensus 240 ~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (662)
T 3azo_A 240 PEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVL 318 (662)
T ss_dssp TTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEE
T ss_pred CCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEE
Confidence 457788999998777 666777667 677788777766544333211 45688889998876543388888
Q ss_pred E--ecCCceeeEEEcCCC-ceEEeeecCCCCCEEEE-ecCCC--eEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEE
Q 018860 213 W--DANHFGLVKSYNMPC-TIESASLEPKYGNKFVA-GGEDM--WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYA 286 (349)
Q Consensus 213 w--d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~d~--~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~ 286 (349)
| |+.+.. ++.+..+. .+..+ +.+..+..+++ ++.+. .|.++|+.+++.......|...+....+++.....+
T Consensus 319 ~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 396 (662)
T 3azo_A 319 GILDPESGE-LVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTF 396 (662)
T ss_dssp EEEETTTTE-EEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEE
T ss_pred EEEECCCCc-EEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEE
Confidence 8 655554 34443332 23333 13332334433 44444 566667777765444344444444444444343444
Q ss_pred EecCCCCEEEecC
Q 018860 287 SGSEDGTIRIWQT 299 (349)
Q Consensus 287 sgs~Dg~v~vW~~ 299 (349)
....+..|..|-.
T Consensus 397 ~~~dg~~i~~~~~ 409 (662)
T 3azo_A 397 TAPDGREIHAHIY 409 (662)
T ss_dssp ECTTSCEEEEEEE
T ss_pred EcCCCCEEEEEEE
Confidence 4444445666543
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.77 E-value=1e-15 Score=135.45 Aligned_cols=236 Identities=8% Similarity=0.045 Sum_probs=177.2
Q ss_pred CCceeeEEEeecCCCccEEEEEecC------------------------CCeEEEeCCCCCeEEEee-cccCCeEEEEEC
Q 018860 16 SRPVVDLFYSPITPDGFFLISASKD------------------------SSPMLRNGETGDWIGTFE-GHKGAVWSCCLD 70 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~d------------------------~~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~ 70 (349)
-+.|.+|+|+| +|+++++.+.+ ++|.+|+..+++.+..+. ++-.....++++
T Consensus 23 l~~v~~va~d~---~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDS---KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECT---TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEEC
T ss_pred cCCceEEEECC---CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEEC
Confidence 35688999986 88989888877 479999998898877665 455678899999
Q ss_pred CCCCeeEEeeCCCeEEEEECCCCC-EEEEec----------cCCeEEEEEEcC-CCCEEEEEe-CCCeEEEEECCCCCCC
Q 018860 71 TNALRAASASADFSAKVWDALTGD-VLHSFE----------HKHIVRACSFSE-DTHLLLTGG-MEKILRIFDLNRPDAP 137 (349)
Q Consensus 71 ~~~~~l~s~s~D~~i~vWd~~~~~-~~~~~~----------~~~~v~~~~~s~-~~~~l~s~~-~d~~i~lwd~~~~~~~ 137 (349)
+++..+++...++.|++|+..... .+..+. +-.....++++| +++++++.+ .++.|++|+... . .
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-~-~ 177 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-K-F 177 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-C-E
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-C-E
Confidence 999988998899999999986542 445442 223588999999 888888886 689999999532 1 1
Q ss_pred Cceec----------cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC---CCCeeEEEEcCCCcEEEE
Q 018860 138 PREVD----------RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET---KSPVTSAEVSQDGRYITT 204 (349)
Q Consensus 138 ~~~~~----------~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~ 204 (349)
...+. ........+++.+..+.++++...++.|++||..+++.+..+.. ...+..+.++| +..+..
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAV 256 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEe
Confidence 11121 11123788999887688888888889999999998988887743 34577888888 433332
Q ss_pred e--------cCCeEEEEecCCceeeEEEc----CCCceEEeeecCCCCCEEEEecCCCeEEEEeCC
Q 018860 205 A--------DGSTVKFWDANHFGLVKSYN----MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258 (349)
Q Consensus 205 ~--------~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 258 (349)
. .+..|++||..+++.+..+. ....+..+++.|. +..+++...++.|++|++.
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d-G~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED-GTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT-SEEEEEESSSCCEEEEEEE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC-CCEEEEECCCCEEEEEeCC
Confidence 1 23589999999988888764 2234678888885 6788888899999999875
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.75 E-value=7.1e-15 Score=138.71 Aligned_cols=272 Identities=13% Similarity=0.142 Sum_probs=200.1
Q ss_pred CCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECC--CCCEEEEeccCCeEE
Q 018860 29 PDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDAL--TGDVLHSFEHKHIVR 106 (349)
Q Consensus 29 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~--~~~~~~~~~~~~~v~ 106 (349)
+.+.++++...++.+.++|..+++.+.++.... .+..+.|+||++++.+++.|+.|.+||+. +++.+..+......+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~ 243 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR 243 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc
Confidence 356677888889999999999999998887543 46789999999999999999999999996 888888887666778
Q ss_pred EEEEc----CCCCEEEEEe-CCCeEEEEECCCCCCCCceecc----------CCC-CeEEEEEecCCCeEEEEeeCCCeE
Q 018860 107 ACSFS----EDTHLLLTGG-MEKILRIFDLNRPDAPPREVDR----------SPG-SVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 107 ~~~~s----~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~----------~~~-~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
.++|+ |+|++++++. .++++.++|..+.+.. ..+.. |+. .+..+..++.+..+++...+.|.|
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~-~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK-KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE-EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE-EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 99999 6999888776 5699999997654321 11110 112 466777777777788777888999
Q ss_pred EEEECCCCceE--EeecCCCCeeEEEEcCCCcEEEE-e-cCCeEEEEecCCceeeEEEcC-CCce---EEee-ecCCCCC
Q 018860 171 RLWDVRSGEIV--QTLETKSPVTSAEVSQDGRYITT-A-DGSTVKFWDANHFGLVKSYNM-PCTI---ESAS-LEPKYGN 241 (349)
Q Consensus 171 ~vwd~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~-~-~d~~i~iwd~~~~~~~~~~~~-~~~~---~~~~-~~~~~~~ 241 (349)
.++|....+.. ..+........+.|+|+++++.+ + .++.|.++|+.+++.+..... .... .... +.|..+.
T Consensus 323 ~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~ 402 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGP 402 (567)
T ss_dssp EEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEE
T ss_pred EEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCc
Confidence 99998775432 33444445678899999987644 3 368999999999988776655 2111 1222 4554455
Q ss_pred EEEEec-CCCeEEEEeCCC-------CcEEEEecCCCcceeEEEEccCCCeEEEecC-------CCCEEEecCCCC
Q 018860 242 KFVAGG-EDMWVRFFDFHT-------GNEIACNKGHHGPVHCVRFSPGGESYASGSE-------DGTIRIWQTGPV 302 (349)
Q Consensus 242 ~~~~~~-~d~~i~v~d~~~-------~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~-------Dg~v~vW~~~~~ 302 (349)
.+++.. .++.|.++|..+ .+.+..+......-.-+.++|++++|..... .++|.++|+...
T Consensus 403 v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 403 VWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 555553 568999999987 5567777654333345788999998876542 469999998655
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=1.9e-15 Score=134.16 Aligned_cols=254 Identities=13% Similarity=0.131 Sum_probs=166.3
Q ss_pred CceeeEEEeecCCCccEEEEEe---------cCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCC---C-
Q 018860 17 RPVVDLFYSPITPDGFFLISAS---------KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASAD---F- 83 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s---------~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~- 83 (349)
..+....+ ||++|+-.. .++.+.+|+..+++.. .+ ..+..++|+|||++|+.++.+ +
T Consensus 15 ~~~~~~~~-----dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT-----KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE-----ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE-----CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 34555555 577776542 2567888898877653 34 457889999999999987754 2
Q ss_pred -eEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCC---------------------------CeEEEEECCCCC
Q 018860 84 -SAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGME---------------------------KILRIFDLNRPD 135 (349)
Q Consensus 84 -~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---------------------------~~i~lwd~~~~~ 135 (349)
.|.+|++.+++......+.. +..++|+|+|+.|+.++.+ ..|.+||+....
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred ceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 48888998887766665555 9999999999988887632 568889986543
Q ss_pred CCCceeccCCCCeEEEEEecCCCeEEEEeeCC---------CeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEE-Ee
Q 018860 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDM---------GGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYIT-TA 205 (349)
Q Consensus 136 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---------g~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~ 205 (349)
. .+.+.. + .+..+.|+|++ +++++..+ ..|.++| +++....... ..+.. ++|+|+.++ ++
T Consensus 164 ~-~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~~~~~--~spdg~~l~~~~ 233 (347)
T 2gop_A 164 V-IEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-VSFYA--VDSDGERILLYG 233 (347)
T ss_dssp E-EEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-ESEEE--EEECSSCEEEEE
T ss_pred E-EeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCceEEeccC-cceee--ECCCCCEEEEEE
Confidence 2 022222 3 67788999766 55554332 2455555 5554333333 33333 389998654 34
Q ss_pred cC--------CeEEEEecCCceeeEEEcC-CCceEE-eeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeE
Q 018860 206 DG--------STVKFWDANHFGLVKSYNM-PCTIES-ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC 275 (349)
Q Consensus 206 ~d--------~~i~iwd~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~ 275 (349)
.+ ..|.+|| +......... ...+.. +.|. ++ .+++++.++.+++| +.+++.. .+..+...|.+
T Consensus 234 ~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~ 306 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMG 306 (347)
T ss_dssp CCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEE
T ss_pred ccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEe
Confidence 22 3678888 4443333222 233443 6666 45 88888999999999 8766553 34445788999
Q ss_pred EEEccCCCeEEEecCCCCE-EEecCC
Q 018860 276 VRFSPGGESYASGSEDGTI-RIWQTG 300 (349)
Q Consensus 276 l~~sp~~~~l~sgs~Dg~v-~vW~~~ 300 (349)
++|+| .++++++.++.. .||..+
T Consensus 307 ~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 307 FDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEESS--SEEEEEECSSSCCEEEEES
T ss_pred eeeeC--cEEEEEcCCCChHHheEeC
Confidence 99999 677777777765 787654
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.73 E-value=6.6e-16 Score=150.33 Aligned_cols=270 Identities=10% Similarity=-0.022 Sum_probs=180.3
Q ss_pred CCccEEEEEecCC---CeEEEe--CCCCCeEEEee------cccCCeEEEEECCCCCeeE-----EeeCCCeEEEEECCC
Q 018860 29 PDGFFLISASKDS---SPMLRN--GETGDWIGTFE------GHKGAVWSCCLDTNALRAA-----SASADFSAKVWDALT 92 (349)
Q Consensus 29 ~~~~~l~s~s~d~---~i~iw~--~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~-----s~s~D~~i~vWd~~~ 92 (349)
++|++++-...++ ...+|. ...++...-+. +|...+..++|+|||++|| +|+.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 4788888777665 345564 33444433332 4666789999999999999 666678999999999
Q ss_pred CCEEEEeccCCeE--EEEEEcCCCCEEEEEeCCCe-------------EEEEECCCCCCCCcee---ccCCCCeEEEEEe
Q 018860 93 GDVLHSFEHKHIV--RACSFSEDTHLLLTGGMEKI-------------LRIFDLNRPDAPPREV---DRSPGSVRTVAWL 154 (349)
Q Consensus 93 ~~~~~~~~~~~~v--~~~~~s~~~~~l~s~~~d~~-------------i~lwd~~~~~~~~~~~---~~~~~~i~~~~~~ 154 (349)
++.+. ..+-..+ ..++|+|||+.|+.++.|.. |++|++.+.......+ ..+...+..+.|+
T Consensus 157 g~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 157 GEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp CCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 87651 1111122 67899999999999988776 9999997654322222 2234567889999
Q ss_pred cCCCeEEEEeeCC-C--eEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEec----CCeEEEEecCCcee---eEEE
Q 018860 155 HSDQTILSTCTDM-G--GVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTAD----GSTVKFWDANHFGL---VKSY 224 (349)
Q Consensus 155 ~~~~~~l~~~~~d-g--~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----d~~i~iwd~~~~~~---~~~~ 224 (349)
|++..+++++.+. + .|.+||..+++...............+ +++.+++.+. ++.|.+||+.+... ...+
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 9888777766553 2 677777766655444444334444445 5555544443 47899999977542 3333
Q ss_pred cC--CCceEEeeecCCCCCEEEEecCCCeEEEEeCC-CCcEEEEecCC-CcceeEEEEccCCCeEE----EecCCCCEEE
Q 018860 225 NM--PCTIESASLEPKYGNKFVAGGEDMWVRFFDFH-TGNEIACNKGH-HGPVHCVRFSPGGESYA----SGSEDGTIRI 296 (349)
Q Consensus 225 ~~--~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~-~~~~~~~~~~h-~~~i~~l~~sp~~~~l~----sgs~Dg~v~v 296 (349)
.. ...+..+.+. .+..+++...|+..++|.+. +++....+..+ .+.+..++++|+++.|+ +...+++|++
T Consensus 315 ~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~ 392 (695)
T 2bkl_A 315 PEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYK 392 (695)
T ss_dssp CCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEE
T ss_pred cCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 32 2234556665 46677888889888877654 45556666554 67788899999998776 4456788999
Q ss_pred ecCCCC
Q 018860 297 WQTGPV 302 (349)
Q Consensus 297 W~~~~~ 302 (349)
||+...
T Consensus 393 ~d~~~g 398 (695)
T 2bkl_A 393 TSVSTG 398 (695)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 998643
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=3.6e-16 Score=141.01 Aligned_cols=238 Identities=11% Similarity=0.034 Sum_probs=161.7
Q ss_pred ccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEE--ECCCCCeeEE------------
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC--LDTNALRAAS------------ 78 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~l~s------------ 78 (349)
.+|...+..+.|+| ||++|+.++.++.+.+|+..+++....+..+...+.... +++++.+++.
T Consensus 77 ~~~~~~~~~~~~sp---dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 77 EGRGDNTFGGFLSP---DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLT 153 (388)
T ss_dssp CSSCBCSSSCEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred eCCCCCccceEEcC---CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccc
Confidence 46666666778886 999999999999999999999988777777766554443 4899988774
Q ss_pred ----------eeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcC-CCCEEEEEeCC------CeEEEEECCCCCCCCcee
Q 018860 79 ----------ASADFSAKVWDALTGDVLHSFEHKHIVRACSFSE-DTHLLLTGGME------KILRIFDLNRPDAPPREV 141 (349)
Q Consensus 79 ----------~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d------~~i~lwd~~~~~~~~~~~ 141 (349)
.+.+..|.+||+.+++......+...+..++|+| +|+.|+.++.+ ..|.++|+.... .+.+
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l 231 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKV 231 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--CEES
T ss_pred ccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEe
Confidence 2355789999999998777777777899999999 99988877653 366777765332 2333
Q ss_pred ccCC--CCeEEEEEecCCCeEEEEeeCCC----eEEEEECCCCceEEeecCCCC------eeEEEEcCCCcEEEE-----
Q 018860 142 DRSP--GSVRTVAWLHSDQTILSTCTDMG----GVRLWDVRSGEIVQTLETKSP------VTSAEVSQDGRYITT----- 204 (349)
Q Consensus 142 ~~~~--~~i~~~~~~~~~~~~l~~~~~dg----~v~vwd~~~~~~~~~~~~~~~------v~~~~~~~~~~~l~~----- 204 (349)
..+. ..+....|+|++..++..+..++ .|.+||+.+++.......... .....|+|||+.|+.
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 232 KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------
T ss_pred eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeec
Confidence 3333 24677889988877765554322 399999998875332221110 111368899876653
Q ss_pred -----ecCCeEEEEecCCceeeEEEcCCC-----------ceEEeeecCCCCCEEEEe-cCCCeEEEEe
Q 018860 205 -----ADGSTVKFWDANHFGLVKSYNMPC-----------TIESASLEPKYGNKFVAG-GEDMWVRFFD 256 (349)
Q Consensus 205 -----~~d~~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~-~~d~~i~v~d 256 (349)
..+..|.+||+.+........... .....+|+|+ ++.++.+ ..++...+|.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spD-g~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPD-DKQILFTSDVHGKPALYL 379 (388)
T ss_dssp -----CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEE
T ss_pred cccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCC-CCEEEEEecCCCceeEEE
Confidence 235689999998876654444333 3456788875 6666654 4566555554
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.72 E-value=1.9e-15 Score=148.05 Aligned_cols=283 Identities=11% Similarity=0.041 Sum_probs=176.8
Q ss_pred eccCCCcee-----eEEEeecCCCccEEEEEecCC---------CeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeE
Q 018860 12 CHGHSRPVV-----DLFYSPITPDGFFLISASKDS---------SPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAA 77 (349)
Q Consensus 12 ~~gh~~~v~-----~~~fs~~~~~~~~l~s~s~d~---------~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 77 (349)
+.+|...+. .+.||| ||++|+.++.+. .+.+||..+++.. .+..|...+...+|+|||+.||
T Consensus 52 ~~~~~~~~~~~~~~~~~~Sp---dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la 127 (740)
T 4a5s_A 52 LENSTFDEFGHSINDYSISP---DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLA 127 (740)
T ss_dssp ECTTTTTTCCSCCCEEEECT---TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEE
T ss_pred EechhhhhhcccccceEECC---CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEE
Confidence 456664332 256675 999999998874 4569999988754 4677888899999999999999
Q ss_pred EeeCCCeEEEEECCCCCEEEEec--cCCeE-----------------EEEEEcCCCCEEEEEeCCC--------------
Q 018860 78 SASADFSAKVWDALTGDVLHSFE--HKHIV-----------------RACSFSEDTHLLLTGGMEK-------------- 124 (349)
Q Consensus 78 s~s~D~~i~vWd~~~~~~~~~~~--~~~~v-----------------~~~~~s~~~~~l~s~~~d~-------------- 124 (349)
.++ |+.|++|++.+++...... +...+ ..++|||||+.|+.++.|.
T Consensus 128 ~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~ 206 (740)
T 4a5s_A 128 YVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE 206 (740)
T ss_dssp EEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST
T ss_pred EEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC
Confidence 885 7899999998887554322 22222 3489999999999875332
Q ss_pred ----------------------eEEEEECCC---CCC-CCceec------cCCCCeEEEEEecCCCeEEEEeeC---CCe
Q 018860 125 ----------------------ILRIFDLNR---PDA-PPREVD------RSPGSVRTVAWLHSDQTILSTCTD---MGG 169 (349)
Q Consensus 125 ----------------------~i~lwd~~~---~~~-~~~~~~------~~~~~i~~~~~~~~~~~~l~~~~~---dg~ 169 (349)
.|++||+.+ .+. ....+. .+...+..++|+|++..++..... +..
T Consensus 207 ~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~ 286 (740)
T 4a5s_A 207 SLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSV 286 (740)
T ss_dssp TCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEE
T ss_pred CCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE
Confidence 477788876 421 111222 255668899999876644433322 247
Q ss_pred EEEEECCCCc----eEE--ee--c-CCCCe-----eEEEEcCCCcEEE--Eec-C--CeEEEEecCCceeeEEEcCCCce
Q 018860 170 VRLWDVRSGE----IVQ--TL--E-TKSPV-----TSAEVSQDGRYIT--TAD-G--STVKFWDANHFGLVKSYNMPCTI 230 (349)
Q Consensus 170 v~vwd~~~~~----~~~--~~--~-~~~~v-----~~~~~~~~~~~l~--~~~-d--~~i~iwd~~~~~~~~~~~~~~~~ 230 (349)
|++||+.+++ +.. .+ . +...+ ....|+|||+.++ .+. + ..|.+||+.+....+.......+
T Consensus 287 i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v 366 (740)
T 4a5s_A 287 MDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEV 366 (740)
T ss_dssp EEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCE
T ss_pred EEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEE
Confidence 9999999887 221 11 1 22222 3678999998654 343 3 46888998876554433333333
Q ss_pred EEeeecCCCCCEEEEecC------CCeEEEEeCCCCcEEEEecC----CCcceeEEEEccCCCeEEEe-cC--CCCEEEe
Q 018860 231 ESASLEPKYGNKFVAGGE------DMWVRFFDFHTGNEIACNKG----HHGPVHCVRFSPGGESYASG-SE--DGTIRIW 297 (349)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~------d~~i~v~d~~~~~~~~~~~~----h~~~i~~l~~sp~~~~l~sg-s~--Dg~v~vW 297 (349)
.... .++.+..++++.. ...|+..++..+.....+.. .........|||++++++.. +. -..+.++
T Consensus 367 ~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~ 445 (740)
T 4a5s_A 367 IGIE-ALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLH 445 (740)
T ss_dssp EEEE-EECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEE
T ss_pred EEEE-EEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEE
Confidence 3322 2332333444443 23566666655443323432 24567899999999986533 22 2346666
Q ss_pred cCC
Q 018860 298 QTG 300 (349)
Q Consensus 298 ~~~ 300 (349)
+..
T Consensus 446 ~~~ 448 (740)
T 4a5s_A 446 SSV 448 (740)
T ss_dssp ETT
T ss_pred ECC
Confidence 654
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.71 E-value=1.6e-14 Score=125.53 Aligned_cols=240 Identities=11% Similarity=0.034 Sum_probs=169.0
Q ss_pred ccCCCceeeEEEeecCCCcc-EEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECC
Q 018860 13 HGHSRPVVDLFYSPITPDGF-FLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDAL 91 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~-~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~ 91 (349)
..+.....+++|+| +|+ +++++..++.|..|+..++ ...+..+...+.++++++++.++++...++.|.+||..
T Consensus 24 ~~~~~~~eg~~~d~---~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 24 ADGFTWTEGPVYVP---ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp ECCCSSEEEEEEEG---GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred ecCCccccCCeEeC---CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 34555667899997 787 7888888999999998876 67777788889999999999988887778999999998
Q ss_pred CCCEEEEecc-----CCeEEEEEEcCCCCEEEE----EeCC-----------CeEEEEECCCCCCCCceeccCCCCeEEE
Q 018860 92 TGDVLHSFEH-----KHIVRACSFSEDTHLLLT----GGME-----------KILRIFDLNRPDAPPREVDRSPGSVRTV 151 (349)
Q Consensus 92 ~~~~~~~~~~-----~~~v~~~~~s~~~~~l~s----~~~d-----------~~i~lwd~~~~~~~~~~~~~~~~~i~~~ 151 (349)
+++....... ...+..++++|+|+++++ |+.+ +.-.+|.++... ....+.........+
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~~~~~gi 177 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG-TLSAPIRDRVKPNGL 177 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS-CEEEEECCCSSEEEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCC-CEEEeecCCCCCccE
Confidence 8876544321 124567999999998887 3310 112455544322 223334455567889
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECC-CCce---EEeec-CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcC
Q 018860 152 AWLHSDQTILSTCTDMGGVRLWDVR-SGEI---VQTLE-TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM 226 (349)
Q Consensus 152 ~~~~~~~~~l~~~~~dg~v~vwd~~-~~~~---~~~~~-~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~ 226 (349)
+|+|++..+ ++...++.|.+||+. +++. ...+. .......+++.++|+++++. ++.|.+||.. ++.+..+..
T Consensus 178 ~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~ 254 (296)
T 3e5z_A 178 AFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLT 254 (296)
T ss_dssp EECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEEC
T ss_pred EECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEEC
Confidence 998877766 677777899999986 5554 23331 12234678899999987777 8899999987 556666665
Q ss_pred CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcE
Q 018860 227 PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE 262 (349)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~ 262 (349)
+..+..++|...+++.|++++.+ .+..++..+.+.
T Consensus 255 ~~~~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 255 PQTTSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp SSCCCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred CCCceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 55466777854456777777665 566667665443
No 181
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=5.6e-13 Score=115.32 Aligned_cols=274 Identities=8% Similarity=-0.018 Sum_probs=187.5
Q ss_pred eccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEE-eecccCCeEEEEECCCCCeeEEeeCCCeEEEEEC
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGT-FEGHKGAVWSCCLDTNALRAASASADFSAKVWDA 90 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~ 90 (349)
+..+...+.++++++ +|+..++...++.+..|+.. ++.... +..+...+.++++++++...++...++.|..|+.
T Consensus 10 ~~~~~~~~~~i~~d~---~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 10 LTNQDTGPYGITVSD---KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITK 85 (299)
T ss_dssp CCSSSCCEEEEEECT---TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCcCCCccceEECC---CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECC
Confidence 345667789999886 78877766667889999987 554322 2234567899999999988888777889999998
Q ss_pred CCCCEEEE-ec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 018860 91 LTGDVLHS-FE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMG 168 (349)
Q Consensus 91 ~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg 168 (349)
. ++.... +. ....+..+++.+++++.++...++.|..||. ...............+..+++.+++ .+.++....+
T Consensus 86 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~ 162 (299)
T 2z2n_A 86 K-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN-ALWFTENQNN 162 (299)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTT
T ss_pred C-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC-CEEEEeCCCC
Confidence 6 443222 21 3456889999999998888777888999987 3221111112233467888887655 5555555568
Q ss_pred eEEEEECCCCceEEe-ec-CCCCeeEEEEcCCCcEEEEec-CCeEEEEecCCceeeEEEcCC---CceEEeeecCCCCCE
Q 018860 169 GVRLWDVRSGEIVQT-LE-TKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMP---CTIESASLEPKYGNK 242 (349)
Q Consensus 169 ~v~vwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 242 (349)
.|..||. +++.... +. .......+.+.+++.++++.. ++.|..||. +.... .+..+ ..+..+++.+. ++.
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~-g~l 238 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPHAITAGAG-IDL 238 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECST-TCE
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCceeEEECCC-CCE
Confidence 9999999 6665432 22 234577899999998776654 688999998 55433 23232 35667788764 677
Q ss_pred EEEecCCCeEEEEeCCCCcEEEE-ecCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 243 FVAGGEDMWVRFFDFHTGNEIAC-NKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 243 ~~~~~~d~~i~v~d~~~~~~~~~-~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
+++...++.|.+||. +++.... ...+...+.++++ +++.++++.+. +.|..+++
T Consensus 239 ~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~-~~l~~~~~ 293 (299)
T 2z2n_A 239 WFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMEC-DKIGKLTL 293 (299)
T ss_dssp EEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETT-TEEEEEEE
T ss_pred EEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecC-CcEEEEEc
Confidence 777667899999998 4443222 3345577899999 88887776664 45555544
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.70 E-value=2e-14 Score=140.28 Aligned_cols=273 Identities=10% Similarity=-0.018 Sum_probs=178.8
Q ss_pred CCccEEEEEecCCC---eEEEe--CCCCCeEEEee------cccCCeEEEEECCCCCeeEEeeCCC-----eEEEEECCC
Q 018860 29 PDGFFLISASKDSS---PMLRN--GETGDWIGTFE------GHKGAVWSCCLDTNALRAASASADF-----SAKVWDALT 92 (349)
Q Consensus 29 ~~~~~l~s~s~d~~---i~iw~--~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vWd~~~ 92 (349)
++|++++-...++. -.+|. ...++....+. +|...+..++|+|||++|+.++.++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 47887765554431 14453 33444332222 3444688899999999998766543 899999999
Q ss_pred CCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCe----------------EEEEECCCCCCCCcee-c--cCCCCeEEEEE
Q 018860 93 GDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKI----------------LRIFDLNRPDAPPREV-D--RSPGSVRTVAW 153 (349)
Q Consensus 93 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~----------------i~lwd~~~~~~~~~~~-~--~~~~~i~~~~~ 153 (349)
++.+........+..++|+|||+.|+.++.++. |.+|++.+.......+ . .++..+..+.|
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 987654322223567999999999999887765 9999997654221222 2 23445778999
Q ss_pred ecCCCeEEEEeeC----CCeEEEEECCC------Cc-eEEeec-CCCCeeEEEEcCCCcEEE-Eec----CCeEEEEecC
Q 018860 154 LHSDQTILSTCTD----MGGVRLWDVRS------GE-IVQTLE-TKSPVTSAEVSQDGRYIT-TAD----GSTVKFWDAN 216 (349)
Q Consensus 154 ~~~~~~~l~~~~~----dg~v~vwd~~~------~~-~~~~~~-~~~~v~~~~~~~~~~~l~-~~~----d~~i~iwd~~ 216 (349)
+|++..++.++.. +..|++||+.+ +. ....+. ....+. ..++++|..+. .+. +..|.+||+.
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 9888877766542 46899999976 42 233333 333333 34778876543 333 2469999998
Q ss_pred Ccee---eEEEcCCC--ceEEeeecCCCCCEEEEecCCC--eEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEE-E-
Q 018860 217 HFGL---VKSYNMPC--TIESASLEPKYGNKFVAGGEDM--WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYA-S- 287 (349)
Q Consensus 217 ~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~--~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~-s- 287 (349)
+... ........ .+..+.+.+ .+..+++...|+ .|++|++.+++.+..+..+.+.+..++++|+++.|+ +
T Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ 398 (710)
T 2xdw_A 320 DPEESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 398 (710)
T ss_dssp SCCGGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEE
T ss_pred CCCcccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEE
Confidence 7531 22333322 355667764 356677777777 466778777887777877888899999999987665 2
Q ss_pred --ecCCCCEEEecCCCCC
Q 018860 288 --GSEDGTIRIWQTGPVT 303 (349)
Q Consensus 288 --gs~Dg~v~vW~~~~~~ 303 (349)
....++|.+||+....
T Consensus 399 ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 399 TSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ECSSCCCEEEEEETTSSS
T ss_pred eCCCCCCEEEEEECCCCc
Confidence 3356789999986543
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.69 E-value=1.6e-13 Score=129.49 Aligned_cols=280 Identities=11% Similarity=0.027 Sum_probs=195.4
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCC--CCCeEEEeecccCCeEEEEEC----CCCCeeEEeeC-CCeEEEEEC
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLD----TNALRAASASA-DFSAKVWDA 90 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~--~~~~~~~~~~h~~~v~~~~~~----~~~~~l~s~s~-D~~i~vWd~ 90 (349)
.+..+.||| ||++|.+++.|+.+.+||.. +.+.+..+..... -..++|+ |||+++++++. +++|.|+|.
T Consensus 198 ~p~~v~~Sp---DGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~ 273 (567)
T 1qks_A 198 AVHISRLSA---SGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 273 (567)
T ss_dssp CEEEEEECT---TSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEET
T ss_pred CccceEECC---CCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEEC
Confidence 345788886 99999999999999999995 7888888876444 4689999 69998887664 699999999
Q ss_pred CCCCEEEEecc-----------CC-eEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCC
Q 018860 91 LTGDVLHSFEH-----------KH-IVRACSFSEDTH-LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSD 157 (349)
Q Consensus 91 ~~~~~~~~~~~-----------~~-~v~~~~~s~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~ 157 (349)
.+.+.+..+.- +. .+..+..++++. ++++....+.|.++|....................+.|.+++
T Consensus 274 ~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdg 353 (567)
T 1qks_A 274 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH 353 (567)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTS
T ss_pred CCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCC
Confidence 99998877642 12 577888888755 445556779999999864321111111223345678899888
Q ss_pred CeEEEEeeCCCeEEEEECCCCceEEeecC-C---CCeeEE-EEcCCC-cEEEEe--cCCeEEEEecCC-------ceeeE
Q 018860 158 QTILSTCTDMGGVRLWDVRSGEIVQTLET-K---SPVTSA-EVSQDG-RYITTA--DGSTVKFWDANH-------FGLVK 222 (349)
Q Consensus 158 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~---~~v~~~-~~~~~~-~~l~~~--~d~~i~iwd~~~-------~~~~~ 222 (349)
.++++++..++.|.++|+.+++.+..+.. . .+-... .++|++ .+++++ .+++|.++|..+ .+.++
T Consensus 354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEE
Confidence 88888887789999999999998776654 2 111122 357874 444554 368999999987 66777
Q ss_pred EEcCCCc-eEEeeecCCCCCEEEEecC-------CCeEEEEeCCCC-----cE-EEEec--------CCCcceeEEEEcc
Q 018860 223 SYNMPCT-IESASLEPKYGNKFVAGGE-------DMWVRFFDFHTG-----NE-IACNK--------GHHGPVHCVRFSP 280 (349)
Q Consensus 223 ~~~~~~~-~~~~~~~~~~~~~~~~~~~-------d~~i~v~d~~~~-----~~-~~~~~--------~h~~~i~~l~~sp 280 (349)
.+..... ..-+..+|+ ++++.+... .++|.+||+.+. .. +..+. .-...+..+.|+|
T Consensus 434 ~i~~~g~g~~~i~~~p~-~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (567)
T 1qks_A 434 SFPALGGGSLFIKTHPN-SQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNK 512 (567)
T ss_dssp EEECSCSCCCCEECCTT-CSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECT
T ss_pred EEecCCCCCEEEEeCCC-CCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECC
Confidence 7665422 233455664 666665442 469999999876 21 12221 1235788999999
Q ss_pred CCCeEEEe--c---CCCCEEEecCCCC
Q 018860 281 GGESYASG--S---EDGTIRIWQTGPV 302 (349)
Q Consensus 281 ~~~~l~sg--s---~Dg~v~vW~~~~~ 302 (349)
+|+++... + .++.|.|+|....
T Consensus 513 ~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 513 DGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp TSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 99987543 2 3788999987544
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.68 E-value=7.8e-14 Score=121.16 Aligned_cols=232 Identities=9% Similarity=0.012 Sum_probs=159.3
Q ss_pred eEEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEEC
Q 018860 53 WIGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131 (349)
Q Consensus 53 ~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~ 131 (349)
.+..+..+.....+++|+++++ .++++..++.|..|+..++ ......+...+.+++++++|+++++...++.|.+||.
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 3445555666778999999998 7888888999999999887 3333345567899999999998888777889999998
Q ss_pred CCCCCCCceecc----CCCCeEEEEEecCCCeEEEE----ee-------------CCCeEEEEECCCCceEEeecCCCCe
Q 018860 132 NRPDAPPREVDR----SPGSVRTVAWLHSDQTILST----CT-------------DMGGVRLWDVRSGEIVQTLETKSPV 190 (349)
Q Consensus 132 ~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~----~~-------------~dg~v~vwd~~~~~~~~~~~~~~~v 190 (349)
.+.... ..... ....+..+++.+++ .++++ +. ..+.|..+|.. ++...........
T Consensus 98 ~~g~~~-~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 98 PGGEWE-SIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP 174 (296)
T ss_dssp TTCCEE-EEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE
T ss_pred CCCcEE-EEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC
Confidence 544321 11111 11234567887755 45554 22 12467777765 5544333444556
Q ss_pred eEEEEcCCCcEEEEe-cCCeEEEEecC-Ccee---eEEEc-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEE
Q 018860 191 TSAEVSQDGRYITTA-DGSTVKFWDAN-HFGL---VKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIA 264 (349)
Q Consensus 191 ~~~~~~~~~~~l~~~-~d~~i~iwd~~-~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~ 264 (349)
..++++|+++.+++. .++.|.+||+. .+.. .+.+. ....+..+++.+. ++.+++. ++.|.+||.. ++.+.
T Consensus 175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~-G~l~v~~--~~~v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAG-GLIWASA--GDGVHVLTPD-GDELG 250 (296)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTT-SCEEEEE--TTEEEEECTT-SCEEE
T ss_pred ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCC-CCEEEEc--CCeEEEECCC-CCEEE
Confidence 889999999887444 36899999986 3333 23331 1223446777764 6666655 8899999986 77777
Q ss_pred EecCCCcceeEEEE-ccCCCeEEEecCCCC
Q 018860 265 CNKGHHGPVHCVRF-SPGGESYASGSEDGT 293 (349)
Q Consensus 265 ~~~~h~~~i~~l~~-sp~~~~l~sgs~Dg~ 293 (349)
.+..+.. +.+++| +|+++.|+.++.++.
T Consensus 251 ~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l 279 (296)
T 3e5z_A 251 RVLTPQT-TSNLCFGGPEGRTLYMTVSTEF 279 (296)
T ss_dssp EEECSSC-CCEEEEESTTSCEEEEEETTEE
T ss_pred EEECCCC-ceeEEEECCCCCEEEEEcCCeE
Confidence 7777777 999999 689998988887753
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.68 E-value=2.8e-13 Score=119.56 Aligned_cols=233 Identities=10% Similarity=0.067 Sum_probs=159.1
Q ss_pred eccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCC----CeEEE
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASAD----FSAKV 87 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D----~~i~v 87 (349)
+.+|...+.+++|+| +|+++++++.++.|.+|+..+++.......+...+.+++++++++++++...+ +.|.+
T Consensus 40 ~~~~~~~~~~~~~~~---~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDR---QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EESSCCCEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred EeccCccccCcEECC---CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 445666678899985 88888888889999999998887765555677789999999999888877766 68999
Q ss_pred EECCCCCEEEEec---cCCeEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeE
Q 018860 88 WDALTGDVLHSFE---HKHIVRACSFSEDTHLLLTGGME----KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTI 160 (349)
Q Consensus 88 Wd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d----~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 160 (349)
||..++.....+. ....+..++++|+|+++++...+ +...+|.++........+......+..++|.+++..+
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEE
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEE
Confidence 9998877654432 34568999999999988876542 2344554432221122222223356788898877666
Q ss_pred EEEeeCCCeEEEEECCC-CceEEe--------ecCCCCeeEEEEcCCCcEEEEe-cCCeEEEEecCCceeeEEEcCCC--
Q 018860 161 LSTCTDMGGVRLWDVRS-GEIVQT--------LETKSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPC-- 228 (349)
Q Consensus 161 l~~~~~dg~v~vwd~~~-~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~-- 228 (349)
+++...++.|.+||+.+ +..... +........+++.++++++++. .++.|.+||.. .+.+..+..+.
T Consensus 197 ~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~ 275 (333)
T 2dg1_A 197 WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRD 275 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGG
T ss_pred EEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCc
Confidence 66666668999999964 332211 1112346778999999877665 46899999984 55555555443
Q ss_pred -----ceEEeeecCCCCCEEEEecCC
Q 018860 229 -----TIESASLEPKYGNKFVAGGED 249 (349)
Q Consensus 229 -----~~~~~~~~~~~~~~~~~~~~d 249 (349)
.+..+++.++ ++.|+.++.+
T Consensus 276 ~g~~~~~~~~~~~~d-g~~L~v~~~~ 300 (333)
T 2dg1_A 276 EGHMLRSTHPQFIPG-TNQLIICSND 300 (333)
T ss_dssp GTCSCBCCEEEECTT-SCEEEEEEEC
T ss_pred cccccCcceEEECCC-CCEEEEEeCc
Confidence 3567788764 5555544443
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.67 E-value=5.2e-14 Score=137.31 Aligned_cols=242 Identities=9% Similarity=-0.033 Sum_probs=164.5
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCC-----CeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCe----
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDS-----SPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFS---- 84 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~-----~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~---- 84 (349)
+|...+..+.||| ||++|+.++.++ .|++|+..+++.+.....+. .+..++|+||++.|+.++.|+.
T Consensus 122 ~~~~~~~~~~~SP---Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSE---DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECT---TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECC---CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccc
Confidence 4555677888886 999998776654 79999999998765333232 2667899999999999988876
Q ss_pred ------------EEEEECCCCCE--EEEec---cCCeEEEEEEcCCCCEEEEEeC-----CCeEEEEECCC------CCC
Q 018860 85 ------------AKVWDALTGDV--LHSFE---HKHIVRACSFSEDTHLLLTGGM-----EKILRIFDLNR------PDA 136 (349)
Q Consensus 85 ------------i~vWd~~~~~~--~~~~~---~~~~v~~~~~s~~~~~l~s~~~-----d~~i~lwd~~~------~~~ 136 (349)
|++|++.+++. ...+. +...+..+.|+|||++|+.++. +..|.+||+.. +..
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 99999988762 22222 4556789999999999887664 56899999875 332
Q ss_pred CCceeccCCCCeEEEEEecCCCeEEEEeeCC---CeEEEEECCCCc---eEEeecCCC--CeeEEEEcCCCcEEEEe-cC
Q 018860 137 PPREVDRSPGSVRTVAWLHSDQTILSTCTDM---GGVRLWDVRSGE---IVQTLETKS--PVTSAEVSQDGRYITTA-DG 207 (349)
Q Consensus 137 ~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d---g~v~vwd~~~~~---~~~~~~~~~--~v~~~~~~~~~~~l~~~-~d 207 (349)
....+..+...+.. .|.++++.++..+..+ +.|.+||+.++. ....+.+.. .+..+.+++++.++++. .+
T Consensus 278 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 278 KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 34444444444444 4677777777665543 479999998764 222333322 46778888777766554 46
Q ss_pred C--eEEEEecCCceeeEEEcCCC-ceEEeeecCCCCCEEE-Eec---CCCeEEEEeCCCCc
Q 018860 208 S--TVKFWDANHFGLVKSYNMPC-TIESASLEPKYGNKFV-AGG---EDMWVRFFDFHTGN 261 (349)
Q Consensus 208 ~--~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~---~d~~i~v~d~~~~~ 261 (349)
+ .|.+||+.+++.++.+..+. .+..+.++|. +..++ +.+ ..++|+.||+.+++
T Consensus 357 g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d-~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKK-DTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTT-CSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCCCEEEecCCCCceEEEEecCCC-CCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 6 46677876666656665542 3455667764 44444 332 45799999998876
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=4.9e-14 Score=124.54 Aligned_cols=240 Identities=8% Similarity=-0.011 Sum_probs=169.8
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEE
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVL 96 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~ 96 (349)
..+..+.++ +++..++...++.+.+||..+++.+.++.. ......++++++++..++...++.|.+||..+++..
T Consensus 44 ~~~~~i~~~----~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 44 DVAQSMVIR----DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp SCEEEEEEE----TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE
T ss_pred ccceEEEEE----CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE
Confidence 345677775 466666777789999999999999988864 356788999888865556558999999999999887
Q ss_pred EEeccCC------eEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCC--
Q 018860 97 HSFEHKH------IVRACSFSEDTHLLLTGG-MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDM-- 167 (349)
Q Consensus 97 ~~~~~~~------~v~~~~~s~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-- 167 (349)
..+.... ....+++ .++.++++.. .++.|.++|+.+.+.. ..+.. ......+.+.++ +.+++++..+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~-~~i~~-g~~p~~i~~~~d-G~l~v~~~~~~~ 194 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVV-DELTI-GIQPTSLVMDKY-NKMWTITDGGYE 194 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEE-EEEEC-SSCBCCCEECTT-SEEEEEBCCBCT
T ss_pred EEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEE-EEEEc-CCCccceEEcCC-CCEEEEECCCcc
Confidence 7766433 4556677 3444444433 4889999998764321 11211 223445666654 4555555443
Q ss_pred --------CeEEEEECCCCceEEeecC--CCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEE--EcC-CCceEEee
Q 018860 168 --------GGVRLWDVRSGEIVQTLET--KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKS--YNM-PCTIESAS 234 (349)
Q Consensus 168 --------g~v~vwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~--~~~-~~~~~~~~ 234 (349)
+.|.++|..+++....+.. ......++++|+++.+..+.. .|.+||..+.+.... ... ...+..++
T Consensus 195 ~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~ 273 (328)
T 3dsm_A 195 GSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLT 273 (328)
T ss_dssp TCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEE
T ss_pred CCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEE
Confidence 7899999999988777654 335789999999888766554 899999987765321 111 23567888
Q ss_pred ecCCCCCEEEEe----cCCCeEEEEeCCCCcEEEEec
Q 018860 235 LEPKYGNKFVAG----GEDMWVRFFDFHTGNEIACNK 267 (349)
Q Consensus 235 ~~~~~~~~~~~~----~~d~~i~v~d~~~~~~~~~~~ 267 (349)
++|..+..+++. ..++.|.+||.. ++.+..+.
T Consensus 274 vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 274 VNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp ECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred EcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 998767888887 678999999998 88776654
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=1.6e-12 Score=116.63 Aligned_cols=265 Identities=12% Similarity=0.034 Sum_probs=177.1
Q ss_pred CCccEEEEEec--CC---CeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEee----------CCCeEEEEECCCC
Q 018860 29 PDGFFLISASK--DS---SPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASAS----------ADFSAKVWDALTG 93 (349)
Q Consensus 29 ~~~~~l~s~s~--d~---~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s----------~D~~i~vWd~~~~ 93 (349)
++++++..... .. ++.++|..+++.+.++..-..+ .++++||+++|..+. .++.|.+||..++
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 47777776653 22 7899999999998888765554 899999999988876 3688999999988
Q ss_pred CEEEEeccC--------CeEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 94 DVLHSFEHK--------HIVRACSFSEDTHLLLTGGM--EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 94 ~~~~~~~~~--------~~v~~~~~s~~~~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
+.+..+.-. .....++|+|||++|+.+.. +..|.++| .+.+. ...+...++. +.+.+.+...+++
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~-~~~~i~~~~~---~~~~~~~~~~~~~ 182 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSS-DDQLLSSPTC---YHIHPGAPSTFYL 182 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCE-EeEEcCCCce---EEEEeCCCceEEE
Confidence 887766432 23457899999999998874 47899999 76432 2220112222 3344555555556
Q ss_pred eeCCCeEEEEECCCCceEEeec------CCCCe-eEEEEcCCC-cEEEEecCCeEEEEecCCce--eeEEEcC-------
Q 018860 164 CTDMGGVRLWDVRSGEIVQTLE------TKSPV-TSAEVSQDG-RYITTADGSTVKFWDANHFG--LVKSYNM------- 226 (349)
Q Consensus 164 ~~~dg~v~vwd~~~~~~~~~~~------~~~~v-~~~~~~~~~-~~l~~~~d~~i~iwd~~~~~--~~~~~~~------- 226 (349)
...||.+.++|. +++...... ...++ ....+.+++ .++..+..+.+.+.|+.... .+..+..
T Consensus 183 ~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~ 261 (373)
T 2mad_H 183 LCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKA 261 (373)
T ss_pred EcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccc
Confidence 667799999999 887663322 11121 123344443 44444567788888886542 2222221
Q ss_pred ----CCceEEeeecCCCCCEEEEec----------CCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCC-eEEEec-C
Q 018860 227 ----PCTIESASLEPKYGNKFVAGG----------EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE-SYASGS-E 290 (349)
Q Consensus 227 ----~~~~~~~~~~~~~~~~~~~~~----------~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~-~l~sgs-~ 290 (349)
+.....+.++++ ++.++.+. ..+.|.++|+.+++.+..+.. ....++++|+|+|+ .|+++. .
T Consensus 262 ~~~~p~g~~~~~~s~d-~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~ 339 (373)
T 2mad_H 262 DTWRPGGWQQVAYLKS-SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAG 339 (373)
T ss_pred cceecCceEeEEECCC-CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCC
Confidence 222334667775 44444432 246899999999999887753 23578999999999 777777 5
Q ss_pred CCCEEEecCCCCC
Q 018860 291 DGTIRIWQTGPVT 303 (349)
Q Consensus 291 Dg~v~vW~~~~~~ 303 (349)
++.|.++|+....
T Consensus 340 ~~~V~ViD~~t~~ 352 (373)
T 2mad_H 340 TEVLHIYDAGAGD 352 (373)
T ss_pred CCeEEEEECCCCC
Confidence 8999999986543
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.65 E-value=4.9e-14 Score=125.08 Aligned_cols=233 Identities=12% Similarity=0.074 Sum_probs=150.4
Q ss_pred ceeeEEEeecCCCccEEEEEecCC---C--eEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCC----------
Q 018860 18 PVVDLFYSPITPDGFFLISASKDS---S--PMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASAD---------- 82 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~---~--i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---------- 82 (349)
.+..+.||| ||++|+.++.++ . +.+|+..+++.......+. +..++|+||++.|+.++.+
T Consensus 60 ~~~~~~~Sp---Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 60 NATMPRISP---DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp SCEEEEECT---TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC-------
T ss_pred cCCCeEECC---CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 456778886 999999887653 3 6667787777655554444 8999999999998887743
Q ss_pred -----------------CeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCC-------eEEEEECCCCCCCC
Q 018860 83 -----------------FSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEK-------ILRIFDLNRPDAPP 138 (349)
Q Consensus 83 -----------------~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~-------~i~lwd~~~~~~~~ 138 (349)
..|.+||+.+++.+..+..+ .+..++|+|+| +++++..+. ..++|.++ ... .
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~ 210 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGK-E 210 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTE-E
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCc-e
Confidence 57999999988763444333 67889999999 888776542 45666654 222 2
Q ss_pred ceeccCCCCeEEEEEecCCCeEEEEeeCC-------CeEEEEECCCCceEEeecC-CCCeeE-EEEcCCCcEEE-EecCC
Q 018860 139 REVDRSPGSVRTVAWLHSDQTILSTCTDM-------GGVRLWDVRSGEIVQTLET-KSPVTS-AEVSQDGRYIT-TADGS 208 (349)
Q Consensus 139 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-------g~v~vwd~~~~~~~~~~~~-~~~v~~-~~~~~~~~~l~-~~~d~ 208 (349)
..+..+ ..+..+ +|++..++..+.+. ..|.+|| +++....... ...+.. +.|+ ++ +++ ++.++
T Consensus 211 ~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~ 283 (347)
T 2gop_A 211 EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEG 283 (347)
T ss_dssp EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETT
T ss_pred EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCC
Confidence 222222 344443 67666666555432 4788888 5555443333 345665 8898 88 554 45688
Q ss_pred eEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeE-EEEeCCCCcEEEEecCCCcc
Q 018860 209 TVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWV-RFFDFHTGNEIACNKGHHGP 272 (349)
Q Consensus 209 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i-~v~d~~~~~~~~~~~~h~~~ 272 (349)
.+++| +.+++..........+..+++++ ..+++++.++.. ++|.+. ++ ...+..|...
T Consensus 284 ~~~l~-~~~g~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 284 SVNLY-IWDGEIKPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp EEEEE-EESSSEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred cEEEE-EcCCceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 99999 87555544444455567777876 566666666543 666554 44 4445555543
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.65 E-value=1.5e-13 Score=118.28 Aligned_cols=211 Identities=12% Similarity=0.115 Sum_probs=155.0
Q ss_pred CCCeeEEeeCCCeEEEEECCCCCEEEEeccC--CeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccC-CCCe
Q 018860 72 NALRAASASADFSAKVWDALTGDVLHSFEHK--HIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRS-PGSV 148 (349)
Q Consensus 72 ~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~-~~~i 148 (349)
.+++|++++.|+.|.+||.++|+.+..+... ..+..++++|+|++++ +.++.|..||. +.+ ....+... ...+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~-~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR-ELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC-EEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC-EEEEEcCCCCccc
Confidence 4578999999999999999999998888744 3688999999999888 34777999987 333 22333332 2457
Q ss_pred EEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCC-------CCeeEEEEcCCCcEEEEe-cCCeEEEEecCCcee
Q 018860 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK-------SPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGL 220 (349)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~ 220 (349)
.++.+.+++..+++.+.+++.|..+|. +|+.+..+... .....+.+.+++.++++. .++.|..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 778888766665554443577888885 77776665421 134456778899888765 57999999998 888
Q ss_pred eEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCC------CcceeEEEEccCCCeEEEec
Q 018860 221 VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH------HGPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h------~~~i~~l~~sp~~~~l~sgs 289 (349)
+..+..+..+......+ +++.++++..++.|..||..+++.+-.+..+ -..+..++..++|..+++.+
T Consensus 158 ~w~~~~~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECSSCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 88887665555556655 4788888888889999999999987666432 23378888999999887763
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=1.4e-14 Score=130.59 Aligned_cols=234 Identities=10% Similarity=0.005 Sum_probs=156.0
Q ss_pred eEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEE-------------------EEECCCCCeeEEe--
Q 018860 21 DLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWS-------------------CCLDTNALRAASA-- 79 (349)
Q Consensus 21 ~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~l~s~-- 79 (349)
.+.|+| ||++|+.++.++.+.+|+..+++....+..+...... +.++|+++.++.+
T Consensus 85 ~~~~sp---dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 85 GGFIST---DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TCEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cceECC---CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 367776 9999999999999999999888876666655543322 3567788777654
Q ss_pred ---eCCCeEEEEECCCCCEEEEeccCCeEEEEEEcC-CCCEEEEEeCC------CeEEEEECCCCCCCCceeccC--CCC
Q 018860 80 ---SADFSAKVWDALTGDVLHSFEHKHIVRACSFSE-DTHLLLTGGME------KILRIFDLNRPDAPPREVDRS--PGS 147 (349)
Q Consensus 80 ---s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d------~~i~lwd~~~~~~~~~~~~~~--~~~ 147 (349)
..+..|.+||+.+++......+...+..+.|+| ++..|+..+.+ ..|.+||+.... .+.+..+ ...
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~ 239 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGES 239 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEE
T ss_pred ccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCcc
Confidence 467789999999988777667777889999999 78877665543 357788875432 2222222 124
Q ss_pred eEEEEEecCCCeEEEEeeCC----CeEEEEECCCCceEEeecCCCCeeEEEEcC-CCcEEEEe-----------------
Q 018860 148 VRTVAWLHSDQTILSTCTDM----GGVRLWDVRSGEIVQTLETKSPVTSAEVSQ-DGRYITTA----------------- 205 (349)
Q Consensus 148 i~~~~~~~~~~~~l~~~~~d----g~v~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~----------------- 205 (349)
+..+.|+|++..++..+.++ +.|++||+.+++........ ... ..|+| ++++++.+
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 67789998877766654432 44999999988754433222 233 78999 99887653
Q ss_pred cCCeEEEEecCCceeeEEEcCCC-----------ceEEeeecCCCCCEEEEec-CCCe--EEEEeCCCCcE
Q 018860 206 DGSTVKFWDANHFGLVKSYNMPC-----------TIESASLEPKYGNKFVAGG-EDMW--VRFFDFHTGNE 262 (349)
Q Consensus 206 ~d~~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~d~~--i~v~d~~~~~~ 262 (349)
.+..|.+||+.+........... ......|+|+ ++.++.++ .++. |..+++.++..
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPN-DDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp CCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred CCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccC-CCeEEEEecCCCCceEEEEEEccccc
Confidence 23689999998766544333322 1334577774 66666554 3444 55555555443
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.64 E-value=1.2e-13 Score=123.17 Aligned_cols=266 Identities=15% Similarity=0.118 Sum_probs=179.9
Q ss_pred CCccEEEEEec-----CCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEee----------CCCeEEEEECCCC
Q 018860 29 PDGFFLISASK-----DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASAS----------ADFSAKVWDALTG 93 (349)
Q Consensus 29 ~~~~~l~s~s~-----d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s----------~D~~i~vWd~~~~ 93 (349)
|+++.+..... ++.+.+.|..+++.+.++..-..+ . ++++||++++..++ .++.|.+||..++
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 57887777765 678999999999999999865666 4 99999999887765 3678999999999
Q ss_pred CEEEEeccC--------CeEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 94 DVLHSFEHK--------HIVRACSFSEDTHLLLTGGM--EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 94 ~~~~~~~~~--------~~v~~~~~s~~~~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
+.+..+.-. .....++|+|||++++.+.. ++.|.++|+.+.+.. ..+. .++ + .. ..|.+...+++
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv-~tI~-v~g-~-~~-~~P~g~~~~~~ 194 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK-RMLD-VPD-C-YH-IFPTAPDTFFM 194 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE-EEEE-CCS-E-EE-EEEEETTEEEE
T ss_pred eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE-EEEE-CCC-c-ce-eecCCCceeEE
Confidence 988877522 13456899999999988864 689999998764321 1111 122 1 12 23444444445
Q ss_pred eeCCCeEEEEECCC-CceEEeecC-----CCCe-eEEEE-cCCCcEEEEecCCeEEEEecCCce--eeEEEc--------
Q 018860 164 CTDMGGVRLWDVRS-GEIVQTLET-----KSPV-TSAEV-SQDGRYITTADGSTVKFWDANHFG--LVKSYN-------- 225 (349)
Q Consensus 164 ~~~dg~v~vwd~~~-~~~~~~~~~-----~~~v-~~~~~-~~~~~~l~~~~d~~i~iwd~~~~~--~~~~~~-------- 225 (349)
.+.||.+.+.++.+ ++....... ..++ ....| .++|+++..+.++.|.+.|..+.. .+..+.
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccc
Confidence 55579999999976 665332211 1122 11233 478888777778999999997553 333222
Q ss_pred ---CCCceEEeeecCCCCCEEEEec---------CCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCC-eEEEe-cCC
Q 018860 226 ---MPCTIESASLEPKYGNKFVAGG---------EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE-SYASG-SED 291 (349)
Q Consensus 226 ---~~~~~~~~~~~~~~~~~~~~~~---------~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~-~l~sg-s~D 291 (349)
.+.....+++++..++.+++-. ..+.|.++|+.+++.+..+.- ...+++|+|+|+++ +|++. ..+
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~ 353 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGD 353 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTT
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCC
Confidence 0122334666765444444332 135799999999999877642 23688999999996 66654 569
Q ss_pred CCEEEecCCCC
Q 018860 292 GTIRIWQTGPV 302 (349)
Q Consensus 292 g~v~vW~~~~~ 302 (349)
++|.++|....
T Consensus 354 ~~VsViD~~t~ 364 (386)
T 3sjl_D 354 KTLYIHDAESG 364 (386)
T ss_dssp TEEEEEETTTC
T ss_pred CeEEEEECCCC
Confidence 99999998654
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=2.1e-14 Score=139.79 Aligned_cols=238 Identities=11% Similarity=-0.029 Sum_probs=155.6
Q ss_pred cCCCceeeEEEeecCCCccEEE-----EEecCCCeEEEeCCCCCeEEEeecccCCe--EEEEECCCCCeeEEeeCCCe--
Q 018860 14 GHSRPVVDLFYSPITPDGFFLI-----SASKDSSPMLRNGETGDWIGTFEGHKGAV--WSCCLDTNALRAASASADFS-- 84 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~-----s~s~d~~i~iw~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~s~D~~-- 84 (349)
+|...+..+.||| ||++|| +|+.+.+|++|+..+++.+. ..+-..+ ..++|+||++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SP---DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSW---DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECT---TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred CCCEEEEEEEECC---CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCC
Confidence 5666788888986 999998 55555789999999988641 1122222 57899999999999998876
Q ss_pred -----------EEEEECCCCCE--EEEec---cCCeEEEEEEcCCCCEEEEEeCCC----eEEEEECCCCCCCCceeccC
Q 018860 85 -----------AKVWDALTGDV--LHSFE---HKHIVRACSFSEDTHLLLTGGMEK----ILRIFDLNRPDAPPREVDRS 144 (349)
Q Consensus 85 -----------i~vWd~~~~~~--~~~~~---~~~~v~~~~~s~~~~~l~s~~~d~----~i~lwd~~~~~~~~~~~~~~ 144 (349)
|++|++.+++. ...+. +...+..+.|+|||++|+.++.++ .|.+|+.. ....+.+..+
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~--~~~~~~l~~~ 270 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG--EKDFRLLVKG 270 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTT--CSSCEEEEEC
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC--CCceEEeecC
Confidence 99999988762 22222 345788999999999998877665 55555543 2233444444
Q ss_pred CCCeEEEEEecCCCeEEEEee---CCCeEEEEECCCCce---EEeecC--CCCeeEEEEcCCCcEEEE-ecCCeEEEEec
Q 018860 145 PGSVRTVAWLHSDQTILSTCT---DMGGVRLWDVRSGEI---VQTLET--KSPVTSAEVSQDGRYITT-ADGSTVKFWDA 215 (349)
Q Consensus 145 ~~~i~~~~~~~~~~~~l~~~~---~dg~v~vwd~~~~~~---~~~~~~--~~~v~~~~~~~~~~~l~~-~~d~~i~iwd~ 215 (349)
........| ++++ +++.+. .++.|.+||+.++.. ...+.+ ...+..+.++ ++.++++ ..++..++|..
T Consensus 271 ~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 271 VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 455555555 4555 555544 257899999987652 333333 2346777777 5555544 55888777755
Q ss_pred C-CceeeEEEcCC--CceEEeeecCCCCCEEE-Ee---cCCCeEEEEeCCCCcE
Q 018860 216 N-HFGLVKSYNMP--CTIESASLEPKYGNKFV-AG---GEDMWVRFFDFHTGNE 262 (349)
Q Consensus 216 ~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~---~~d~~i~v~d~~~~~~ 262 (349)
. .+...+.+..+ ..+..+.+++. +..++ +. ...++|++||+.+++.
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~s~d-~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMGLED-LDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBSCTT-CSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred eCCCCeeEEecCCCCeEEEEeecCCC-CCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 4 23444444443 23445566664 55554 32 3457899999988764
No 194
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=4.3e-13 Score=114.53 Aligned_cols=235 Identities=8% Similarity=-0.079 Sum_probs=161.1
Q ss_pred CeEEEEECCCCCeeE-EeeCCCeEEEEECCCCCEEEEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCce
Q 018860 63 AVWSCCLDTNALRAA-SASADFSAKVWDALTGDVLHSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPRE 140 (349)
Q Consensus 63 ~v~~~~~~~~~~~l~-s~s~D~~i~vWd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~ 140 (349)
...++++++++..++ +...++.|.+|+..++...... .+...+..+++.++++++++.. ++.|..||...... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~--~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ--TV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC--EE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE--ee
Confidence 567889999998777 5578899999997665433221 2234578899999999777666 88999999764322 21
Q ss_pred ec-cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEee-cCCCCeeEEEEcCCCcEEEEe-cCCeEEEEecCC
Q 018860 141 VD-RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYITTA-DGSTVKFWDANH 217 (349)
Q Consensus 141 ~~-~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~ 217 (349)
+. .....+..+++.+++ .++++...++.|.+||..+....... ........+++.++++++++. .++.|.+||...
T Consensus 102 ~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 21 222467888887755 46656555689999987665443222 222346788999999876665 468999999887
Q ss_pred ceeeEEEcCC-CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEE
Q 018860 218 FGLVKSYNMP-CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296 (349)
Q Consensus 218 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~v 296 (349)
.......... ..+..+++.+. +..+++...++.|.+|+............+...+.+++++|+|+++++.+.++.|++
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~ 259 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVDEA-GTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVK 259 (270)
T ss_dssp CCEEECCCSSCCSEEEEEECTT-CCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEE
T ss_pred CceEeecccCCCCceEEEECCC-CCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEE
Confidence 6543322222 34667888774 677777778899999998765443333334467899999999998889999999999
Q ss_pred ecCCCC
Q 018860 297 WQTGPV 302 (349)
Q Consensus 297 W~~~~~ 302 (349)
++....
T Consensus 260 ~~~~~~ 265 (270)
T 1rwi_B 260 LTSLEH 265 (270)
T ss_dssp ECCCGG
T ss_pred EcCCCc
Confidence 987543
No 195
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.63 E-value=1.5e-13 Score=118.70 Aligned_cols=197 Identities=12% Similarity=0.209 Sum_probs=143.2
Q ss_pred cCCCceeeEEEeecCCCccEEEEEec-CCCeEEEeCCCCCeEEEeec-ccCCeEEEEECCCCCeeEEeeCCCeEEEEECC
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASK-DSSPMLRNGETGDWIGTFEG-HKGAVWSCCLDTNALRAASASADFSAKVWDAL 91 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~-d~~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~ 91 (349)
+|...+..+++++ ++++++++... ++.|.+|+ .+++.+..+.. +...+..+++++++..+++...++.|++|+..
T Consensus 74 ~~~~~p~~i~~~~--~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 74 SQLLYPNRVAVVR--NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp TCBSSEEEEEEET--TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccccCceEEEEEc--CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC
Confidence 3556778888842 36766666543 78999999 56777777743 44678999999999988888889999999964
Q ss_pred CCCEEEEec---cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceec--cCCCCeEEEEEecCCCeEEEEeeC
Q 018860 92 TGDVLHSFE---HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVD--RSPGSVRTVAWLHSDQTILSTCTD 166 (349)
Q Consensus 92 ~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~~~~ 166 (349)
++.+..+. +...+..++++++++++++...++.|++||.... ....+. ++...+..+++.+++ .++++...
T Consensus 151 -g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~--~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~ 226 (286)
T 1q7f_A 151 -GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ--YLRQIGGEGITNYPIGVGINSNG-EILIADNH 226 (286)
T ss_dssp -SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC--EEEEESCTTTSCSEEEEEECTTC-CEEEEECS
T ss_pred -CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC--EEEEEccCCccCCCcEEEECCCC-CEEEEeCC
Confidence 56666653 3356899999999998888888999999997432 112222 122467889988765 55555555
Q ss_pred CC-eEEEEECCCCceEEeecCC---CCeeEEEEcCCCcEEEEecCCeEEEEecCCc
Q 018860 167 MG-GVRLWDVRSGEIVQTLETK---SPVTSAEVSQDGRYITTADGSTVKFWDANHF 218 (349)
Q Consensus 167 dg-~v~vwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~ 218 (349)
++ .|.+||. +++.+..+... .....++++|+++++++..++.|++|+....
T Consensus 227 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 227 NNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp SSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred CCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcccc
Confidence 55 9999995 56666555432 2367899999999887777899999997643
No 196
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.63 E-value=2.4e-11 Score=105.06 Aligned_cols=273 Identities=7% Similarity=-0.054 Sum_probs=184.2
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEE-EeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCC
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT 92 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~ 92 (349)
.....+.++++++ +|+..++...++.+.+|+.. ++... .+..+...+.++++++++...++...++.|..+|..
T Consensus 17 ~~~~~p~~i~~d~---~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSE---DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECT---TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCCCcceeeECC---CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 3455678898876 78877777678899999987 65543 223344678999999999887777778899999987
Q ss_pred CCEEEEe-c-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 018860 93 GDVLHSF-E-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 93 ~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
++..... . ....+..+++.+++++.++...++.|..|+.. ..............+..+++.+.+. +.++....+.|
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i 169 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNSI 169 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEE
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCeE
Confidence 6543222 1 23568899999999988887778889889875 2211111222334678888876555 55555555889
Q ss_pred EEEECCCCceEEe-ec-CCCCeeEEEEcCCCcEEEEec-CCeEEEEecCCceeeEE-Ec-CCCceEEeeecCCCCCEEEE
Q 018860 171 RLWDVRSGEIVQT-LE-TKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKS-YN-MPCTIESASLEPKYGNKFVA 245 (349)
Q Consensus 171 ~vwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 245 (349)
..+|. +++.... .. .......+.+.+++.+.++.. ++.|..||. +...... .. ....+..+++.+. ++.+++
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~ 246 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKN-SEIWFT 246 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST-TCEEEE
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCC-CCEEEe
Confidence 99998 5554432 11 223577889999998777654 678999998 3333322 11 1234567777764 677777
Q ss_pred ecCCCeEEEEeCCCCcEEE-EecCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 246 GGEDMWVRFFDFHTGNEIA-CNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 246 ~~~d~~i~v~d~~~~~~~~-~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
...++.|..||. +++... .+......+.++++.++|.++++.. . .|..+++
T Consensus 247 ~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 247 EWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp ETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred ccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 777899999998 444332 2333456689999999998766555 4 5555553
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.61 E-value=2.8e-13 Score=132.74 Aligned_cols=269 Identities=12% Similarity=0.052 Sum_probs=170.4
Q ss_pred CCccEEEEEecCCC---eEEEeC--C---CCCeEEEe------ecccCCeEEEEECCCCCeeEEeeCC-----CeEEEEE
Q 018860 29 PDGFFLISASKDSS---PMLRNG--E---TGDWIGTF------EGHKGAVWSCCLDTNALRAASASAD-----FSAKVWD 89 (349)
Q Consensus 29 ~~~~~l~s~s~d~~---i~iw~~--~---~~~~~~~~------~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vWd 89 (349)
++|++++-...++. ..+|.. . .++...-+ ++|...+..++|+|||++|+.++.+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 48888887776654 566643 2 33433222 3344467889999999999877654 4699999
Q ss_pred CCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCe--------------EEEEECCCCCCCCcee-c--cCCCCeEEEE
Q 018860 90 ALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKI--------------LRIFDLNRPDAPPREV-D--RSPGSVRTVA 152 (349)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~--------------i~lwd~~~~~~~~~~~-~--~~~~~i~~~~ 152 (349)
+.+++.+....+...+..++|+|| +.|+.++.++. |.+|++.+.......+ . .++..+..+.
T Consensus 196 l~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~ 274 (741)
T 1yr2_A 196 VADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGAS 274 (741)
T ss_dssp TTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEE
Confidence 999987654222222357899999 88888876654 8889986544222222 2 2223478889
Q ss_pred EecCCCeEEEEeeC----CCeEEEEECCCC--c-eEEeecCCCCeeEEEEcCCCcEEE-Eec----CCeEEEEecCCc--
Q 018860 153 WLHSDQTILSTCTD----MGGVRLWDVRSG--E-IVQTLETKSPVTSAEVSQDGRYIT-TAD----GSTVKFWDANHF-- 218 (349)
Q Consensus 153 ~~~~~~~~l~~~~~----dg~v~vwd~~~~--~-~~~~~~~~~~v~~~~~~~~~~~l~-~~~----d~~i~iwd~~~~-- 218 (349)
|+|++..++.++.+ ...|++||+.++ + .............. ++|++..+. .+. +..|.+||+.+.
T Consensus 275 ~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 353 (741)
T 1yr2_A 275 VSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTP 353 (741)
T ss_dssp ECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSC
T ss_pred ECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcc
Confidence 99877777766643 248999999876 4 33323333333333 347776553 343 346999998874
Q ss_pred eeeEEEcCCC-ceEEeeecCCCCCEEEEecCCCeEEEEeCC-CCcEEEEecC-CCcceeEEEEccCCCeEE----EecCC
Q 018860 219 GLVKSYNMPC-TIESASLEPKYGNKFVAGGEDMWVRFFDFH-TGNEIACNKG-HHGPVHCVRFSPGGESYA----SGSED 291 (349)
Q Consensus 219 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~-~~~~~~~~~~-h~~~i~~l~~sp~~~~l~----sgs~D 291 (349)
.....+.... .+..+.+. .+..+++...|+..++|.+. +++....+.. +.+.+..++++|+++.|+ +....
T Consensus 354 ~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P 431 (741)
T 1yr2_A 354 RFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQP 431 (741)
T ss_dssp EEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEE
T ss_pred ccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCC
Confidence 3333333322 23345554 35677778888877776543 4555555554 367789999999988665 44566
Q ss_pred CCEEEecCCC
Q 018860 292 GTIRIWQTGP 301 (349)
Q Consensus 292 g~v~vW~~~~ 301 (349)
++|++||+..
T Consensus 432 ~~i~~~d~~t 441 (741)
T 1yr2_A 432 ATVLALDPAT 441 (741)
T ss_dssp EEEEEEETTT
T ss_pred CEEEEEECCC
Confidence 8899999754
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.61 E-value=8.4e-13 Score=113.57 Aligned_cols=189 Identities=13% Similarity=0.093 Sum_probs=143.4
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEeeccc-CCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccC--CeEE
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHK--HIVR 106 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~--~~v~ 106 (349)
.+++|++++.|+.+.+||.++++.+..+..|. ..+.++.++|+|++|+ +.++.|+.||. +|+.+..+... ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 36899999999999999999999999998876 5788999999999888 45788999999 78888887643 4788
Q ss_pred EEEEcCCCCEEEEEeC-CCeEEEEECCCCCCCCceec------cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCc
Q 018860 107 ACSFSEDTHLLLTGGM-EKILRIFDLNRPDAPPREVD------RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE 179 (349)
Q Consensus 107 ~~~~s~~~~~l~s~~~-d~~i~lwd~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 179 (349)
++.+.++|+++++.+. ++.+..+|.. ......+. .+......+...+ ++.++++...++.|..||.. |+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SC
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-CC
Confidence 9999999999999876 6666666642 21111111 1111222334444 45566677778999999998 99
Q ss_pred eEEeecCCCCeeEEEEcCCCcEEEEe-cCCeEEEEecCCceeeEEEc
Q 018860 180 IVQTLETKSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYN 225 (349)
Q Consensus 180 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~ 225 (349)
.+-.+........+...+++.+++++ .++.|..+|..+++.+..+.
T Consensus 157 ~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 157 LLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 88888765555677788999887765 46689999999888887775
No 199
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.60 E-value=9.7e-13 Score=112.33 Aligned_cols=237 Identities=10% Similarity=-0.094 Sum_probs=158.7
Q ss_pred ceeeEEEeecCCCccEEE-EEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEE
Q 018860 18 PVVDLFYSPITPDGFFLI-SASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVL 96 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~-s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~ 96 (349)
.+.+++++| +|++.+ +.+.++.|.+|+..+.........+...+.++++++++..+++.. ++.|.+||..+....
T Consensus 25 ~p~~i~~~~---~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDS---AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECT---TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECC---CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 567888886 788666 547788899998765443222223335678899999998666665 889999998765443
Q ss_pred EEe-ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 018860 97 HSF-EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175 (349)
Q Consensus 97 ~~~-~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~ 175 (349)
... .....+..+++.++|+++++...++.|.+|+....... .........+..+++.+++. ++++...++.|.+||.
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEA 178 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-eeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEec
Confidence 222 22256889999999998888777888999975432211 11111223466788876554 6555555689999998
Q ss_pred CCCceEEeecC-CCCeeEEEEcCCCcEEEEe-cCCeEEEEecCCceeeEEEcC-CCceEEeeecCCCCCEEEEecCCCeE
Q 018860 176 RSGEIVQTLET-KSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWV 252 (349)
Q Consensus 176 ~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i 252 (349)
..+........ ......+++.+++.++++. .++.|.+||............ ...+..+++.+. ++.+++...++.|
T Consensus 179 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~v 257 (270)
T 1rwi_B 179 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD-RTVYVADRGNDRV 257 (270)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTT-CCEEEEEGGGTEE
T ss_pred CCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCC-CCEEEEECCCCEE
Confidence 87665433222 2457889999998776665 478899999876543322111 134677888874 6788888899999
Q ss_pred EEEeCCCCc
Q 018860 253 RFFDFHTGN 261 (349)
Q Consensus 253 ~v~d~~~~~ 261 (349)
++|++...+
T Consensus 258 ~~~~~~~~~ 266 (270)
T 1rwi_B 258 VKLTSLEHH 266 (270)
T ss_dssp EEECCCGGG
T ss_pred EEEcCCCcc
Confidence 999987544
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=2.5e-12 Score=112.29 Aligned_cols=233 Identities=11% Similarity=0.046 Sum_probs=156.9
Q ss_pred CCeEEEEECCCCCeeEE-------eeCCCeEEEEECCCCCEEEEec-----cCCeEEEEEEcCC-CCEEEEEeCCCeEEE
Q 018860 62 GAVWSCCLDTNALRAAS-------ASADFSAKVWDALTGDVLHSFE-----HKHIVRACSFSED-THLLLTGGMEKILRI 128 (349)
Q Consensus 62 ~~v~~~~~~~~~~~l~s-------~s~D~~i~vWd~~~~~~~~~~~-----~~~~v~~~~~s~~-~~~l~s~~~d~~i~l 128 (349)
....+++|++++..+++ +..++.|.+||..+++...... +...+..++++++ ++++++.. ...|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEE
Confidence 34578999999987777 6788999999988887654332 3456889999999 77665544 447888
Q ss_pred EECCCCCCCCce-ec---c-CCCCeEEEEEecCCCeEEEEeeCC---------------CeEEEEECCCCceEEeecCCC
Q 018860 129 FDLNRPDAPPRE-VD---R-SPGSVRTVAWLHSDQTILSTCTDM---------------GGVRLWDVRSGEIVQTLETKS 188 (349)
Q Consensus 129 wd~~~~~~~~~~-~~---~-~~~~i~~~~~~~~~~~~l~~~~~d---------------g~v~vwd~~~~~~~~~~~~~~ 188 (349)
||.. .+. ... .. . ....+..+++.+++..++ +...+ +.|..||.. ++.........
T Consensus 97 ~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (314)
T 1pjx_A 97 VQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWI-TAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ 172 (314)
T ss_dssp EETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEE-EECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES
T ss_pred EeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEE-EecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC
Confidence 9976 321 111 11 1 112467888877654444 44333 578888876 65543333333
Q ss_pred CeeEEEEc----CCCcEE-EE-ecCCeEEEEecC-Ccee-----eEEEcCC--CceEEeeecCCCCCEEEEecCCCeEEE
Q 018860 189 PVTSAEVS----QDGRYI-TT-ADGSTVKFWDAN-HFGL-----VKSYNMP--CTIESASLEPKYGNKFVAGGEDMWVRF 254 (349)
Q Consensus 189 ~v~~~~~~----~~~~~l-~~-~~d~~i~iwd~~-~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~v 254 (349)
....+.++ ++++.+ ++ ..++.|.+||.. .... ...+... ..+..+++.+ +++.+++...++.|.+
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGSSHIEV 251 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-CCCEEEEEcCCCEEEE
Confidence 45778899 998644 44 347899999975 3321 1111111 3456677776 4777777778899999
Q ss_pred EeCCCCcEEEEecCCCcceeEEEEccCCCeE-EEecCCCCEEEecCC
Q 018860 255 FDFHTGNEIACNKGHHGPVHCVRFSPGGESY-ASGSEDGTIRIWQTG 300 (349)
Q Consensus 255 ~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l-~sgs~Dg~v~vW~~~ 300 (349)
||..+++.+..+..+...+.+++|+|+++.| ++...++.|..|++.
T Consensus 252 ~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 252 FGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp ECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 9998777666666676789999999999954 566677889999875
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.57 E-value=6e-12 Score=109.82 Aligned_cols=238 Identities=13% Similarity=0.138 Sum_probs=160.5
Q ss_pred ccCCCceeeEEEeecCCCccEEEE-------EecCCCeEEEeCCCCCeEEEee----cccCCeEEEEECCC-CCeeEEee
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLIS-------ASKDSSPMLRNGETGDWIGTFE----GHKGAVWSCCLDTN-ALRAASAS 80 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s-------~s~d~~i~iw~~~~~~~~~~~~----~h~~~v~~~~~~~~-~~~l~s~s 80 (349)
.+....+.+++|++ +|+++++ ++.++.+..|+..+++...... ++...+.+++++++ +.++++..
T Consensus 14 ~~~~~~~~~~~~~~---~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 14 TEDIPGAEGPVFDK---NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp ECCCTTCEEEEECT---TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET
T ss_pred hccCCCccCceECC---CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC
Confidence 34445567888985 7887777 5778899999987777643222 25677899999999 76555444
Q ss_pred CCCeEEEEECCCCCEEEE-ecc-----CCeEEEEEEcCCCCEEEEEeCC---------------CeEEEEECCCCCCCCc
Q 018860 81 ADFSAKVWDALTGDVLHS-FEH-----KHIVRACSFSEDTHLLLTGGME---------------KILRIFDLNRPDAPPR 139 (349)
Q Consensus 81 ~D~~i~vWd~~~~~~~~~-~~~-----~~~v~~~~~s~~~~~l~s~~~d---------------~~i~lwd~~~~~~~~~ 139 (349)
...|.+||.. ++.... ... ...+..+++.++|++.++...+ +.|..|+.. .. ..
T Consensus 91 -~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~-~~ 165 (314)
T 1pjx_A 91 -RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQ-MI 165 (314)
T ss_dssp -TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SC-EE
T ss_pred -CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CC-EE
Confidence 4478899988 766544 321 1347899999999988876654 445555543 21 12
Q ss_pred eeccCCCCeEEEEEe----cCCCeEEEEeeCCCeEEEEECC-CCce-----EEeecCC--CCeeEEEEcCCCcEEEEe-c
Q 018860 140 EVDRSPGSVRTVAWL----HSDQTILSTCTDMGGVRLWDVR-SGEI-----VQTLETK--SPVTSAEVSQDGRYITTA-D 206 (349)
Q Consensus 140 ~~~~~~~~i~~~~~~----~~~~~~l~~~~~dg~v~vwd~~-~~~~-----~~~~~~~--~~v~~~~~~~~~~~l~~~-~ 206 (349)
.+.........++|. +++..++++...++.|.+||+. +++. ...+... .....+++.++|+++++. .
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 222222346778888 7665666666667899999986 4542 2222222 346788999999887665 5
Q ss_pred CCeEEEEecCCceeeEEEcCC-CceEEeeecCCCCC-EEEEecCCCeEEEEeCCC
Q 018860 207 GSTVKFWDANHFGLVKSYNMP-CTIESASLEPKYGN-KFVAGGEDMWVRFFDFHT 259 (349)
Q Consensus 207 d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~d~~i~v~d~~~ 259 (349)
++.|..||..+.+.+..+..+ ..+..+++.+. ++ .+++...++.|..|++..
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~d-g~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQ-TKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSSCEEEEEECTT-SSEEEEEETTTTEEEEEECSS
T ss_pred CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCC-CCEEEEEeCCCCeEEEEeCCC
Confidence 789999999866666555554 45677888764 66 556666778999999864
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.55 E-value=4e-12 Score=113.28 Aligned_cols=254 Identities=13% Similarity=0.063 Sum_probs=168.9
Q ss_pred eEEEeecCCCccEEEEEe----------cCCCeEEEeCCCCCeEEEeeccc-------CCeEEEEECCCCCeeEEeeC--
Q 018860 21 DLFYSPITPDGFFLISAS----------KDSSPMLRNGETGDWIGTFEGHK-------GAVWSCCLDTNALRAASASA-- 81 (349)
Q Consensus 21 ~~~fs~~~~~~~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~s~s~-- 81 (349)
.+++|| ||++|..++ .++.+.+||..+.+.+.++.-.. ..-..++|++||++|..+..
T Consensus 82 ~va~sp---DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~ 158 (386)
T 3sjl_D 82 NPVVAD---DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 158 (386)
T ss_dssp EEEECT---TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS
T ss_pred cEEECC---CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC
Confidence 388886 999887775 36789999999999988885321 12346899999999888764
Q ss_pred CCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCc----eeccCCCCeE-EEEEecC
Q 018860 82 DFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR----EVDRSPGSVR-TVAWLHS 156 (349)
Q Consensus 82 D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~----~~~~~~~~i~-~~~~~~~ 156 (349)
++.|.++|+.+++.+.++.-+.. ...+....+.+++.+.||.+-+.++........ .+......+. ...|.+.
T Consensus 159 ~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp SCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred CCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 68999999999999988865442 122323345566666777777777654222110 0111111121 2355556
Q ss_pred CCeEEEEeeCCCeEEEEECCCCc--eEEeec--------C---CCCeeEEEEcCCCcEEEEec-----------CCeEEE
Q 018860 157 DQTILSTCTDMGGVRLWDVRSGE--IVQTLE--------T---KSPVTSAEVSQDGRYITTAD-----------GSTVKF 212 (349)
Q Consensus 157 ~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~--------~---~~~v~~~~~~~~~~~l~~~~-----------d~~i~i 212 (349)
++.++..+. +|.|.+.|+.++. ....+. . ......+.++++++.+.... .+.|.+
T Consensus 237 dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 666544333 5899999997654 333332 0 12334567788887664432 247999
Q ss_pred EecCCceeeEEEcCCCceEEeeecCCCCCEEEE-ecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccC
Q 018860 213 WDANHFGLVKSYNMPCTIESASLEPKYGNKFVA-GGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPG 281 (349)
Q Consensus 213 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~ 281 (349)
.|+.+.+.++.+.....+..+.++++...+|++ ...++.|.++|..+++.+..+..- +.-..|.+++|
T Consensus 316 iD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 316 LDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred EECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 999999999998887777789999864335555 567999999999999998887532 22345666665
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.54 E-value=7.2e-11 Score=101.93 Aligned_cols=235 Identities=7% Similarity=-0.050 Sum_probs=164.5
Q ss_pred ecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEe-c-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCC
Q 018860 58 EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSF-E-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPD 135 (349)
Q Consensus 58 ~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~ 135 (349)
..+...+.++++++++...++...++.|.+||.. ++..... . ....+..+++.+++++.++...++.|..|+... .
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~ 88 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKG-I 88 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTS-C
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCC-c
Confidence 3455678999999999877777778999999988 6544322 1 345789999999999888877788899998752 1
Q ss_pred CCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEee-c-CCCCeeEEEEcCCCcEEEEec-CCeEEE
Q 018860 136 APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-E-TKSPVTSAEVSQDGRYITTAD-GSTVKF 212 (349)
Q Consensus 136 ~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~-d~~i~i 212 (349)
............+..+++.+++ .++++...++.|.+||. +++..... . ....+..+.+.++++++++.. ++.|..
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGR 166 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred EEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence 1111111233467888887644 55555555689999998 55544322 2 234578899999998877654 688999
Q ss_pred EecCCceeeEE-Ec-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEE-ecCCCcceeEEEEccCCCeEEEec
Q 018860 213 WDANHFGLVKS-YN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIAC-NKGHHGPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 213 wd~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~-~~~h~~~i~~l~~sp~~~~l~sgs 289 (349)
||. +...... .. ....+..+++.+. ++.+++...++.|.+||. +++.... ...+...+.+++++++|..+++..
T Consensus 167 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 167 ITE-SGDITEFKIPTPASGPVGITKGND-DALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTT-SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred EcC-CCcEEEeeCCCCCCcceeEEECCC-CCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEecc
Confidence 998 5544332 11 1234567777764 677777777889999999 6664332 334556789999999998777776
Q ss_pred CCCCEEEecC
Q 018860 290 EDGTIRIWQT 299 (349)
Q Consensus 290 ~Dg~v~vW~~ 299 (349)
.++.|..|+.
T Consensus 244 ~~~~i~~~d~ 253 (299)
T 2z2n_A 244 GANKIGRLTS 253 (299)
T ss_dssp TTTEEEEEET
T ss_pred CCceEEEECC
Confidence 7889999986
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.54 E-value=2.3e-11 Score=110.58 Aligned_cols=231 Identities=13% Similarity=0.107 Sum_probs=159.1
Q ss_pred CeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCC--eEEEEECCCCCCCCce
Q 018860 63 AVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEK--ILRIFDLNRPDAPPRE 140 (349)
Q Consensus 63 ~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~--~i~lwd~~~~~~~~~~ 140 (349)
....++|++++.++++...++.|++||..+++............ ++|+++++.|+++..++ .|.+|+...... ...
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~~ 209 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PTR 209 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-eEE
Confidence 46789999999988888888999999998877665554433344 99999999998888765 678887653322 112
Q ss_pred e----ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEe----ecCCC---CeeEEEEcCC-CcEEEEe-cC
Q 018860 141 V----DRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT----LETKS---PVTSAEVSQD-GRYITTA-DG 207 (349)
Q Consensus 141 ~----~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~----~~~~~---~v~~~~~~~~-~~~l~~~-~d 207 (349)
+ ......+..+++.|.++.+++ +..++.|+.||+.++..... ..... |...++++|+ +.++++. .+
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 2 113345677888876777776 44568999999987754322 11111 2238999995 5555543 47
Q ss_pred CeEEEEecCCceeeEEEcCC---------------CceEEeeecCCCCCEEEEec-CCCeEEEEeCCCCcEEEEecCC--
Q 018860 208 STVKFWDANHFGLVKSYNMP---------------CTIESASLEPKYGNKFVAGG-EDMWVRFFDFHTGNEIACNKGH-- 269 (349)
Q Consensus 208 ~~i~iwd~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~-~d~~i~v~d~~~~~~~~~~~~h-- 269 (349)
+.|..|+.... ........ ..+..+++.+. ++++++-. .++.|+.|++.++... .+.++
T Consensus 289 ~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~ 365 (409)
T 3hrp_A 289 SSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVD 365 (409)
T ss_dssp TEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTTTCEEEEEETTTTEEE-EEEECTT
T ss_pred CEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCC
Confidence 88999997654 22111111 23567888875 77888888 8999999998777643 33322
Q ss_pred -------------CcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 270 -------------HGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 270 -------------~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
-.....++++|++.++++-...+.|+.+++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 245789999999888888888888887753
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.51 E-value=7e-12 Score=122.83 Aligned_cols=242 Identities=10% Similarity=0.004 Sum_probs=152.0
Q ss_pred cCCCceeeEEEeecCCCccEEEEEecC-----CCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCe----
Q 018860 14 GHSRPVVDLFYSPITPDGFFLISASKD-----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFS---- 84 (349)
Q Consensus 14 gh~~~v~~~~fs~~~~~~~~l~s~s~d-----~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~---- 84 (349)
+|...+..+.||| ||++|+.++.+ .+|++|+.++++.+.. ..+...+..++|+|| +.|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SP---DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 160 DGATALDAWAASD---DGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp ---EEEEEEEECT---TSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC----
T ss_pred CCCEEEEeEEECC---CCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccc
Confidence 4545677888886 99999887665 3599999999987543 112222356899999 88888887654
Q ss_pred ----------EEEEECCCCCE--EEEec---cCCeEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCCCC-Cceecc
Q 018860 85 ----------AKVWDALTGDV--LHSFE---HKHIVRACSFSEDTHLLLTGGMEK-----ILRIFDLNRPDAP-PREVDR 143 (349)
Q Consensus 85 ----------i~vWd~~~~~~--~~~~~---~~~~v~~~~~s~~~~~l~s~~~d~-----~i~lwd~~~~~~~-~~~~~~ 143 (349)
|++|++.+++. ...+. +...+..+.|+|||++|+..+.++ .|.+||+..+... .+.+..
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 89999987652 22332 233588999999999888776543 7999998764212 344444
Q ss_pred CCCCeEEEEEecCCCeEEEEeeC---CCeEEEEECCCC--ceEEeecCCC-CeeEEEEcCCCcEEEE-ecCCeEEEEecC
Q 018860 144 SPGSVRTVAWLHSDQTILSTCTD---MGGVRLWDVRSG--EIVQTLETKS-PVTSAEVSQDGRYITT-ADGSTVKFWDAN 216 (349)
Q Consensus 144 ~~~~i~~~~~~~~~~~~l~~~~~---dg~v~vwd~~~~--~~~~~~~~~~-~v~~~~~~~~~~~l~~-~~d~~i~iwd~~ 216 (349)
+........ .+.++.++..+.. ++.|.+||+.++ .....+.... .+..+.+. ++.++++ ..++..++|...
T Consensus 315 ~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 315 DLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 444444443 3666766665543 356999999874 3443444332 35556666 4444444 457776666543
Q ss_pred -CceeeEEEcCC--CceEEeeecCCCCCEEEEe---cCCCeEEEEeCCCCcE
Q 018860 217 -HFGLVKSYNMP--CTIESASLEPKYGNKFVAG---GEDMWVRFFDFHTGNE 262 (349)
Q Consensus 217 -~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~d~~i~v~d~~~~~~ 262 (349)
.+...+.+..+ ..+..+.++|.....+++. ...++|++||+.+++.
T Consensus 393 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 393 LDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp TTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 34445555443 3455667777533344433 3457899999988763
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.49 E-value=4.9e-10 Score=100.51 Aligned_cols=235 Identities=10% Similarity=-0.030 Sum_probs=161.2
Q ss_pred eEEEeecCCCccEEEEEe----------cCCCeEEEeCCCCCeEEEeecc-------cCCeEEEEECCCCCeeEEeeC--
Q 018860 21 DLFYSPITPDGFFLISAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDTNALRAASASA-- 81 (349)
Q Consensus 21 ~~~fs~~~~~~~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~s~-- 81 (349)
.++||| ||++|..+. .++.+.++|..+.+.+.++.-. ...-..++|+||+++|+.++.
T Consensus 70 ~i~~sp---Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAH---SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CeEECC---CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC
Confidence 788887 999998886 3678999999988888776432 112347899999999998874
Q ss_pred CCeEEEEECCCCCEEEE-eccCCeEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCCCCcee----ccCCCCe-EEEEEe
Q 018860 82 DFSAKVWDALTGDVLHS-FEHKHIVRACSFSEDT-HLLLTGGMEKILRIFDLNRPDAPPREV----DRSPGSV-RTVAWL 154 (349)
Q Consensus 82 D~~i~vWd~~~~~~~~~-~~~~~~v~~~~~s~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~----~~~~~~i-~~~~~~ 154 (349)
+..|.++| .+++.+.. +..+.. +.+.|++ +.+++.+.|+.+.++|. ..+...... .....++ ....+.
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE
Confidence 57899999 99998888 765443 3445554 45566678899999998 433221100 0111111 123445
Q ss_pred cCCCeEEEEeeCCCeEEEEECCCCc--eEEeecC-----------CCCeeEEEEcCCCcEEEEe-c----------CCeE
Q 018860 155 HSDQTILSTCTDMGGVRLWDVRSGE--IVQTLET-----------KSPVTSAEVSQDGRYITTA-D----------GSTV 210 (349)
Q Consensus 155 ~~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~-----------~~~v~~~~~~~~~~~l~~~-~----------d~~i 210 (349)
+.++.++... ..+.+.+.|+.++. .+..+.. ......+.++|++..+... . ++.|
T Consensus 222 ~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V 300 (373)
T 2mad_H 222 NKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEV 300 (373)
T ss_pred ecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeE
Confidence 5555555444 45889999987553 2232221 1223447789988765442 2 2579
Q ss_pred EEEecCCceeeEEEcCCCceEEeeecCCCCC-EEEEec-CCCeEEEEeCCCCcEEEE
Q 018860 211 KFWDANHFGLVKSYNMPCTIESASLEPKYGN-KFVAGG-EDMWVRFFDFHTGNEIAC 265 (349)
Q Consensus 211 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~d~~i~v~d~~~~~~~~~ 265 (349)
.++|+.+.+.+..+........+.++|+ ++ .++++. .++.|.+||+.+++.+..
T Consensus 301 ~VID~~t~~vv~~i~~g~~p~~i~~s~D-g~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 301 TSVTGLVGQTSSQISLGHDVDAISVAQD-GGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EEEECCCCEEEEEEECCCCcCeEEECCC-CCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 9999999999998887777888999985 66 677766 589999999999998876
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.48 E-value=8.2e-11 Score=106.95 Aligned_cols=234 Identities=12% Similarity=0.066 Sum_probs=158.2
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCC--eEEEEECCCCC
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADF--SAKVWDALTGD 94 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~--~i~vWd~~~~~ 94 (349)
..+..++|+| +|+++++...++.|++|+..++...........+ . ++|++++..|+.+..++ .|.+|+..++.
T Consensus 131 ~~P~~la~d~---~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVG---NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECS---TTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeC---CCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 4567888885 7887777777789999999877665555443332 3 89999999988888866 79999987665
Q ss_pred EEEEe----c-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCce---eccCCCCe-E-EEEEecCCCeEEEEe
Q 018860 95 VLHSF----E-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPRE---VDRSPGSV-R-TVAWLHSDQTILSTC 164 (349)
Q Consensus 95 ~~~~~----~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~---~~~~~~~i-~-~~~~~~~~~~~l~~~ 164 (349)
....+ . ....+..++++|++..|+.+..++.|+.||+......... ..+..... . .++|.|.++.++++.
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 54444 2 3456788999995444555677889999998654311100 11111111 2 889998778888887
Q ss_pred eCCCeEEEEECCCCceEEeecC---------------CCCeeEEEEcCCCcEEEE-e-cCCeEEEEecCCceeeEEEcC-
Q 018860 165 TDMGGVRLWDVRSGEIVQTLET---------------KSPVTSAEVSQDGRYITT-A-DGSTVKFWDANHFGLVKSYNM- 226 (349)
Q Consensus 165 ~~dg~v~vwd~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~-~-~d~~i~iwd~~~~~~~~~~~~- 226 (349)
...+.|+.||.... ....... -.....++++++++++++ . .++.|+.||+..+........
T Consensus 286 ~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~ 364 (409)
T 3hrp_A 286 QNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQV 364 (409)
T ss_dssp TTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECT
T ss_pred CCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCC
Confidence 77789999997643 2211111 123578999999987666 4 568999999766654433322
Q ss_pred --------------CCceEEeeecCCCCCEEEEecCCCeEEEEeC
Q 018860 227 --------------PCTIESASLEPKYGNKFVAGGEDMWVRFFDF 257 (349)
Q Consensus 227 --------------~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~ 257 (349)
-..+..+++.+. +..+++-..++.|+.+++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 123567788875 677777778888887764
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.48 E-value=9.7e-12 Score=112.64 Aligned_cols=267 Identities=16% Similarity=0.135 Sum_probs=175.8
Q ss_pred CCccEEEEEecC-----CCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEee----------CCCeEEEEECCCC
Q 018860 29 PDGFFLISASKD-----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASAS----------ADFSAKVWDALTG 93 (349)
Q Consensus 29 ~~~~~l~s~s~d-----~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s----------~D~~i~vWd~~~~ 93 (349)
++++++...... +.+.+.|..+++.+.++..-..+ .++++||+++|..+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 455655555442 68999999999999999865566 799999999888776 4778999999999
Q ss_pred CEEEEeccC--------CeEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 94 DVLHSFEHK--------HIVRACSFSEDTHLLLTGGM--EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 94 ~~~~~~~~~--------~~v~~~~~s~~~~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
+.+..+.-. .....++|+|||++++.+.. ++.|.+.|+.+.+.. ..+. ..+ . ....|.+...+++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv-~~I~-v~g-~--~~~~p~g~~~~v~ 234 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFD-RMLD-VPD-C--YHIFPASPTVFYM 234 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEE-EEEE-CCS-E--EEEEEEETTEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEE-EEEE-cCC-c--eeeccCCCcEEEE
Confidence 988877532 23456899999999998874 578999998764321 1121 111 1 1223333344445
Q ss_pred eeCCCeEEEEECCCCceEEe----ecC-CCC-eeEEEEcCCCcE-EEEecCCeEEEEecCCceee--EEEcC--------
Q 018860 164 CTDMGGVRLWDVRSGEIVQT----LET-KSP-VTSAEVSQDGRY-ITTADGSTVKFWDANHFGLV--KSYNM-------- 226 (349)
Q Consensus 164 ~~~dg~v~vwd~~~~~~~~~----~~~-~~~-v~~~~~~~~~~~-l~~~~d~~i~iwd~~~~~~~--~~~~~-------- 226 (349)
.+.||.+.+.++.+++.... +.. ..+ ...+.+.+++.. +..+..+.+.+.|....... ..+..
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~ 314 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERAD 314 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGG
T ss_pred EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccc
Confidence 55668888888866655422 211 111 123456777654 45556788999998654321 11111
Q ss_pred ---CCceEEeeecCCCCCEEEEec---------CCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCC-eEEEec-CCC
Q 018860 227 ---PCTIESASLEPKYGNKFVAGG---------EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGE-SYASGS-EDG 292 (349)
Q Consensus 227 ---~~~~~~~~~~~~~~~~~~~~~---------~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~-~l~sgs-~Dg 292 (349)
+.....++++++..+.+++.. ..+.|.++|+.+.+.+..+..- ...+.++|+|+++ +|++.. .++
T Consensus 315 g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~ 393 (426)
T 3c75_H 315 DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQ 393 (426)
T ss_dssp TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTT
T ss_pred ccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCC
Confidence 111122567775334444432 2458999999999998877532 2478999999999 888777 599
Q ss_pred CEEEecCCCCC
Q 018860 293 TIRIWQTGPVT 303 (349)
Q Consensus 293 ~v~vW~~~~~~ 303 (349)
+|.++|+....
T Consensus 394 ~VsVID~~t~k 404 (426)
T 3c75_H 394 TLHIYDAATGE 404 (426)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCCCC
Confidence 99999986553
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.44 E-value=3.3e-10 Score=98.30 Aligned_cols=221 Identities=11% Similarity=0.022 Sum_probs=145.8
Q ss_pred CCeEEEEECCC-CCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCce
Q 018860 62 GAVWSCCLDTN-ALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPRE 140 (349)
Q Consensus 62 ~~v~~~~~~~~-~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~ 140 (349)
.--.+..|+++ +..+++...++.|..||..+++. ..+.....+.+++++++|+++++ . +..|.+||..+... ..
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~--~~ 87 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSA--VV 87 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEE--EE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcE--EE
Confidence 34567788885 45666777789999999988765 44556678999999999996655 3 56789999864332 11
Q ss_pred ecc-----CCCCeEEEEEecCCCeEEEEeeC----------CCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEe
Q 018860 141 VDR-----SPGSVRTVAWLHSDQTILSTCTD----------MGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA 205 (349)
Q Consensus 141 ~~~-----~~~~i~~~~~~~~~~~~l~~~~~----------dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 205 (349)
+.. ....+..+.+.+++..++.+... .+.|..+|.. ++...........+.++++|+++.+..+
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEe
Confidence 111 11236778888766544433221 1345555543 4433333333345789999999865433
Q ss_pred --cCCeEEEEecC--Cceee--EEE-cC---CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeE
Q 018860 206 --DGSTVKFWDAN--HFGLV--KSY-NM---PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC 275 (349)
Q Consensus 206 --~d~~i~iwd~~--~~~~~--~~~-~~---~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~ 275 (349)
.++.|..||+. ++... +.+ .. ...+..+++.+. ++++++....+.|.+||..+++.+..+..+...+++
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~-G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~ 245 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE-GKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTS 245 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT-SCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEE
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC-CCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceE
Confidence 36889999873 33321 111 11 234567777764 777777777889999999999998888877778999
Q ss_pred EEEc-cCCCeEEEec
Q 018860 276 VRFS-PGGESYASGS 289 (349)
Q Consensus 276 l~~s-p~~~~l~sgs 289 (349)
++|. |+++.|+.++
T Consensus 246 ~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 246 CCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEESGGGCEEEEEE
T ss_pred EEEeCCCCCEEEEEc
Confidence 9998 8888765433
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.43 E-value=4.2e-11 Score=116.40 Aligned_cols=237 Identities=13% Similarity=0.051 Sum_probs=149.6
Q ss_pred cccCCeEEEEECCCCCeeE-----EeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCC---------
Q 018860 59 GHKGAVWSCCLDTNALRAA-----SASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEK--------- 124 (349)
Q Consensus 59 ~h~~~v~~~~~~~~~~~l~-----s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~--------- 124 (349)
+|...+..++|+||+++|| +|+.+..|++||+.+++.+...-.......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 4556788899999999888 4555578999999999865532111113567899 999998888774
Q ss_pred ----eEEEEECCCCCCCCceecc----CCCCeEEEEEecCCCeEEEEeeC---CCeEEEEECCCCc-eEEeec-CCCCee
Q 018860 125 ----ILRIFDLNRPDAPPREVDR----SPGSVRTVAWLHSDQTILSTCTD---MGGVRLWDVRSGE-IVQTLE-TKSPVT 191 (349)
Q Consensus 125 ----~i~lwd~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~~~~---dg~v~vwd~~~~~-~~~~~~-~~~~v~ 191 (349)
.|.+|++.+.......+.. ++.....+.|++++..++++... .+.|++||+.++. ....+. ......
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 3899998765432222222 23346788899888877666543 2589999997763 223333 333333
Q ss_pred EEEEcCCCc-EEEEec----CCeEEEEecCCcee---eEEEcCCCceEEeeecCCCCCEEEEec-CCC--eEEEEeCCCC
Q 018860 192 SAEVSQDGR-YITTAD----GSTVKFWDANHFGL---VKSYNMPCTIESASLEPKYGNKFVAGG-EDM--WVRFFDFHTG 260 (349)
Q Consensus 192 ~~~~~~~~~-~l~~~~----d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~--~i~v~d~~~~ 260 (349)
.. +++++. ++..+. ...|..+|+.+... ........... .+.+. ++.++... .++ .|++|++..+
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~-g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSG-SGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEE-TTEEEEEEEETTEEEEEEECTTSC
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEE-CCEEEEEEEECCeeEEEEEECCCC
Confidence 33 555554 444432 35788999887543 22233333333 66664 55565544 444 7899998754
Q ss_pred cEEEEec-CCCcceeEEEEccCCCeEEEecCC----CCEEEecCCC
Q 018860 261 NEIACNK-GHHGPVHCVRFSPGGESYASGSED----GTIRIWQTGP 301 (349)
Q Consensus 261 ~~~~~~~-~h~~~i~~l~~sp~~~~l~sgs~D----g~v~vW~~~~ 301 (349)
. ...+. .+.+.+..+.++|+++.|+....+ ++|..||+..
T Consensus 361 ~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 361 R-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp E-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred e-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 4 33333 345667788888888776544333 7888888753
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.42 E-value=1.1e-10 Score=113.55 Aligned_cols=240 Identities=15% Similarity=0.082 Sum_probs=154.0
Q ss_pred ccCCCceeeEEEeecCCCccEEEE-----EecCCCeEEEeCCCCCeEEE-eecccCCeEEEEECCCCCeeEEeeCCCe--
Q 018860 13 HGHSRPVVDLFYSPITPDGFFLIS-----ASKDSSPMLRNGETGDWIGT-FEGHKGAVWSCCLDTNALRAASASADFS-- 84 (349)
Q Consensus 13 ~gh~~~v~~~~fs~~~~~~~~l~s-----~s~d~~i~iw~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s~D~~-- 84 (349)
.+|...+..+.||| ||++||- |+...+|++||.++++.+.. +.+.+ ...++|+ |++.|+.++.|..
T Consensus 125 ~~~~~~l~~~~~Sp---Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k--~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 125 PDGTTALDQLSFSR---DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVK--FSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp TTSCCEEEEEEECT---TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEE--SCCCEEE-TTTEEEEEESSCCC-
T ss_pred CCCcEEEEEEEECC---CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCce--eccEEEe-CCCEEEEEEecCccc
Confidence 46777777888886 9998873 33334789999999986542 32221 2457899 9999998888744
Q ss_pred -----------EEEEECCCCCE--EEEec----cCCeEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCCCCCceecc
Q 018860 85 -----------AKVWDALTGDV--LHSFE----HKHIVRACSFSEDTHLLLTGG----MEKILRIFDLNRPDAPPREVDR 143 (349)
Q Consensus 85 -----------i~vWd~~~~~~--~~~~~----~~~~v~~~~~s~~~~~l~s~~----~d~~i~lwd~~~~~~~~~~~~~ 143 (349)
|++|++.++.. ...+. +......+.|+|||++|+... ....|.++|+..+....+.+..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 99999987642 23332 233577899999999875433 2358999999766544455554
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCC---CeEEEEECCCCce---EEeecCCCCeeEEEEcCCCcEEEEe--cCC--eEEEE
Q 018860 144 SPGSVRTVAWLHSDQTILSTCTDM---GGVRLWDVRSGEI---VQTLETKSPVTSAEVSQDGRYITTA--DGS--TVKFW 213 (349)
Q Consensus 144 ~~~~i~~~~~~~~~~~~l~~~~~d---g~v~vwd~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~--~d~--~i~iw 213 (349)
+....... |.+.++.+++....+ +.|..||+.++.. ...+.+...+. .+++++..|+.. .++ .|.+|
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEE
Confidence 44444443 566677776666543 6899999987654 22233333343 788888766543 344 68899
Q ss_pred ecCCceeeEEEcCCC--ceEEeeecCCCCCEEEEecC---CCeEEEEeCCCCcE
Q 018860 214 DANHFGLVKSYNMPC--TIESASLEPKYGNKFVAGGE---DMWVRFFDFHTGNE 262 (349)
Q Consensus 214 d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---d~~i~v~d~~~~~~ 262 (349)
|+.... .+.+..+. .+..+.+.+.....+++.+. -++++.||+.+++.
T Consensus 356 d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 356 DYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp CTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred ECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 987543 34444432 34455555544444444332 27899999987764
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.41 E-value=3.6e-09 Score=91.15 Aligned_cols=232 Identities=9% Similarity=-0.014 Sum_probs=161.6
Q ss_pred ccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEE-ec-cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCC
Q 018860 60 HKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHS-FE-HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAP 137 (349)
Q Consensus 60 h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~ 137 (349)
......++++++++...++...++.|.+||.. ++.... +. ....+..+++.+++++.++...++.|..||.. ....
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT 95 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE
Confidence 34567899999999887877778999999987 654432 22 23568899999999988877778889999876 2221
Q ss_pred CceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEe-ec-CCCCeeEEEEcCCCcEEEEec-CCeEEEEe
Q 018860 138 PREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LE-TKSPVTSAEVSQDGRYITTAD-GSTVKFWD 214 (349)
Q Consensus 138 ~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-d~~i~iwd 214 (349)
..........+..+++.+.+ .++++...++.|..||.. ++.... +. .......+.+.+++++.++.. ++.|..||
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 11112223567888887654 555555556899999987 655422 22 234578899999998766654 67899999
Q ss_pred cCCceeeEEEcCC---CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEE-ecCCCcceeEEEEccCCCeEEEecC
Q 018860 215 ANHFGLVKSYNMP---CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIAC-NKGHHGPVHCVRFSPGGESYASGSE 290 (349)
Q Consensus 215 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~-~~~h~~~i~~l~~sp~~~~l~sgs~ 290 (349)
. ...... +..+ ..+..+++.+ +++.+++....+.|.+||. +++.... ...+...+.++++.+++.+.++...
T Consensus 174 ~-~g~~~~-~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 174 N-TGKLEE-YPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp T-TCCEEE-EECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred C-CCcEEE-eeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccC
Confidence 8 444333 3222 2456777776 4677777777889999998 5554332 3345567899999999987777777
Q ss_pred CCCEEEecC
Q 018860 291 DGTIRIWQT 299 (349)
Q Consensus 291 Dg~v~vW~~ 299 (349)
++.|..|+.
T Consensus 250 ~~~i~~~~~ 258 (300)
T 2qc5_A 250 ANQIGRITN 258 (300)
T ss_dssp TTEEEEECT
T ss_pred CCeEEEECC
Confidence 889999986
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.39 E-value=1.7e-09 Score=93.84 Aligned_cols=223 Identities=10% Similarity=0.038 Sum_probs=149.4
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEE
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLH 97 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~ 97 (349)
-.-+..|+| .++.++++...++.|..|+..+++. ..+. +...+.++++++++.++++ . +..|.+||..+++...
T Consensus 14 ~~Egp~w~~--~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 14 CGESPVWEE--VSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp BEEEEEEET--TTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEE
T ss_pred cccCCeEEC--CCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEE
Confidence 344677876 2456777777888999999887765 3333 3467899999999995554 3 5679999998876543
Q ss_pred Eecc-----CCeEEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 98 SFEH-----KHIVRACSFSEDTHLLLTGGM---------EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 98 ~~~~-----~~~v~~~~~s~~~~~l~s~~~---------d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
.... ...++.+++.|+|++.++... .....+|.+..... ...+.........++|+|++..++++
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEECTTSCEEEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEEcCCCCEEEEe
Confidence 3321 235789999999997776432 23456776654322 12222223346788999887777777
Q ss_pred eeCCCeEEEEEC--CCCceE-----EeecC-CCCeeEEEEcCCCcEEEEe-cCCeEEEEecCCceeeEEEcCC-CceEEe
Q 018860 164 CTDMGGVRLWDV--RSGEIV-----QTLET-KSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMP-CTIESA 233 (349)
Q Consensus 164 ~~~dg~v~vwd~--~~~~~~-----~~~~~-~~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~-~~~~~~ 233 (349)
.+.++.|.+||+ .++... ..+.. ......+++.++|++.++. .++.|..||..+++.+..+..+ ..+.++
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~ 246 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSC 246 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEE
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEE
Confidence 777789999987 455432 12221 2345678899999877665 4678999999988888888776 467788
Q ss_pred eec-CCCCCEEEEec
Q 018860 234 SLE-PKYGNKFVAGG 247 (349)
Q Consensus 234 ~~~-~~~~~~~~~~~ 247 (349)
+|. |..+..+++..
T Consensus 247 ~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 247 CFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEESGGGCEEEEEEB
T ss_pred EEeCCCCCEEEEEcC
Confidence 887 43233344443
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=1.4e-11 Score=110.23 Aligned_cols=169 Identities=14% Similarity=0.061 Sum_probs=126.0
Q ss_pred CeEEEEECCCCCeeEEeeCCCeEEEEECCCCC-----------EEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEEC
Q 018860 63 AVWSCCLDTNALRAASASADFSAKVWDALTGD-----------VLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131 (349)
Q Consensus 63 ~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~-----------~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~ 131 (349)
++..+++++...++++|+.|+ +++|+....+ ......++. |+.++| +++.|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 578899999999999999985 6679854322 223445677 999999 89999988 8899999998
Q ss_pred CCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEecCCeEE
Q 018860 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVK 211 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~ 211 (349)
..... ......+...+..+.+.+++ ++.+..||+|.+||+.++.... ....+++++|+|+| ++++..|++++
T Consensus 114 ~sl~~-~~~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~ 185 (388)
T 1xip_A 114 EELSE-FRTVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQ 185 (388)
T ss_dssp SSTTC-EEEEEECSSCEEEEEECSSE---EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSCEE
T ss_pred hhhhc-cCccceeecceeeEEecCCC---EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCcEE
Confidence 76542 33344556678888877663 5567778999999999877653 23479999999999 56677899999
Q ss_pred EEecCCcee--eEEE------c----CCCceEEeeecCCCCCEEEE
Q 018860 212 FWDANHFGL--VKSY------N----MPCTIESASLEPKYGNKFVA 245 (349)
Q Consensus 212 iwd~~~~~~--~~~~------~----~~~~~~~~~~~~~~~~~~~~ 245 (349)
+|+...... .+.+ . .+..+.++.|.+. ..++++
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~-~~flv~ 230 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP-QDFLAV 230 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS-SEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecC-CeEEEE
Confidence 999887765 4444 1 3456788888874 455544
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.37 E-value=1.7e-09 Score=95.16 Aligned_cols=216 Identities=13% Similarity=-0.004 Sum_probs=140.2
Q ss_pred eEEEEECCC-CCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceec
Q 018860 64 VWSCCLDTN-ALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVD 142 (349)
Q Consensus 64 v~~~~~~~~-~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 142 (349)
..+..|+++ +..+++...++.|..||..+++.. .+.....+.+++++++|+++++. .+ .|.+||..+... ..+.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~--~~~~ 125 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVL--TLHA 125 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCE--EEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcE--EEEe
Confidence 456788886 455667767899999999877543 34456779999999999877764 33 488999765432 1111
Q ss_pred cC-----CCCeEEEEEecCCCeEEEEeeC-----CCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEe--cCCeE
Q 018860 143 RS-----PGSVRTVAWLHSDQTILSTCTD-----MGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA--DGSTV 210 (349)
Q Consensus 143 ~~-----~~~i~~~~~~~~~~~~l~~~~~-----dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i 210 (349)
.. ...+..+.+.+++..++.+... .+.|..+| +++...........+.++++|+++.+..+ .++.|
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 11 1246788888766544433321 24566666 45543322222346788999999765333 36889
Q ss_pred EEEecC--Cc-ee-----eEEEc-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEc-c
Q 018860 211 KFWDAN--HF-GL-----VKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFS-P 280 (349)
Q Consensus 211 ~iwd~~--~~-~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~s-p 280 (349)
.+||+. ++ .. ...+. ....+..+++.+ +++++++...++.|.+||. +++.+..+..+...+.+++|+ |
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~ 281 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGP 281 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEEST
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecC
Confidence 999985 43 21 11111 122345666665 3677776666789999998 677777777677789999998 8
Q ss_pred CCCeEEEe
Q 018860 281 GGESYASG 288 (349)
Q Consensus 281 ~~~~l~sg 288 (349)
+++.|+.+
T Consensus 282 d~~~L~vt 289 (326)
T 2ghs_A 282 DASRLLVT 289 (326)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEEE
Confidence 88776543
No 216
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.37 E-value=3.5e-11 Score=107.23 Aligned_cols=254 Identities=10% Similarity=-0.016 Sum_probs=165.6
Q ss_pred EEEEEecCC----CeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEee----------CCCeEEEEECCCCCEEEE
Q 018860 33 FLISASKDS----SPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASAS----------ADFSAKVWDALTGDVLHS 98 (349)
Q Consensus 33 ~l~s~s~d~----~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s----------~D~~i~vWd~~~~~~~~~ 98 (349)
..++-..++ ++.+.|.++++.+.++..-..+ .+.++||++++..+. .+++|.+||..+++.+..
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 344444455 6779999999999999866666 799999999988886 478999999999999988
Q ss_pred eccC--------CeEEEEEEcCCCCEEEEEeC--CCeEEE--EECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeC
Q 018860 99 FEHK--------HIVRACSFSEDTHLLLTGGM--EKILRI--FDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTD 166 (349)
Q Consensus 99 ~~~~--------~~v~~~~~s~~~~~l~s~~~--d~~i~l--wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 166 (349)
+.-+ .....++|+|||++++++.. ...+.+ +|+.+ ...+. ..+.+ ...|.+...+.+.+.
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~~i~-v~~~~---~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQLTK-SASCF---HIHPGAAATHYLGSC 183 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EEEEE-CSSCC---CCEEEETTEEECCCC
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ceEEE-CCCce---EEccCCCeEEEEEcC
Confidence 7532 23467899999999998874 456888 88754 11111 11111 112334444445556
Q ss_pred CCeEEEEECCC-----CceEEe----ec-CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCc--eeeEEEcCC-------
Q 018860 167 MGGVRLWDVRS-----GEIVQT----LE-TKSPVTSAEVSQDGRYITTADGSTVKFWDANHF--GLVKSYNMP------- 227 (349)
Q Consensus 167 dg~v~vwd~~~-----~~~~~~----~~-~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~--~~~~~~~~~------- 227 (349)
||.+.+.|+.+ ++.... +. ...+. .....+.++..+. +.+.+.|+... ..+..+...
T Consensus 184 dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~ 259 (368)
T 1mda_H 184 PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKAD 259 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHT
T ss_pred CCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccc
Confidence 68888888876 443311 11 12333 2444455566666 88999998643 222222211
Q ss_pred ----CceEEeeecCCCCCEEEE-ec---C-----CCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCe-EEEec-CCC
Q 018860 228 ----CTIESASLEPKYGNKFVA-GG---E-----DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGES-YASGS-EDG 292 (349)
Q Consensus 228 ----~~~~~~~~~~~~~~~~~~-~~---~-----d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~-l~sgs-~Dg 292 (349)
.....+.+.++ ++.++. .. . ++.+.++|+.+.+.+..+.... ....++|+|++++ +++.. .++
T Consensus 260 ~~~p~g~~~v~~s~d-g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~ 337 (368)
T 1mda_H 260 NFRSAGFQMVAKLKN-TDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTE 337 (368)
T ss_dssp TEEECSSSCEEEETT-TTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTT
T ss_pred ccccCcceeeEEcCC-CCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCC
Confidence 11112567775 455544 33 2 2356699999999887765333 5789999999984 55666 599
Q ss_pred CEEEecCCCC
Q 018860 293 TIRIWQTGPV 302 (349)
Q Consensus 293 ~v~vW~~~~~ 302 (349)
+|.++|+...
T Consensus 338 ~VsVID~~t~ 347 (368)
T 1mda_H 338 VLDIYDAASD 347 (368)
T ss_dssp EEEEEESSSC
T ss_pred eEEEEECCCC
Confidence 9999998654
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.35 E-value=3.3e-11 Score=107.71 Aligned_cols=171 Identities=11% Similarity=0.035 Sum_probs=126.4
Q ss_pred eEEEEEEcCCCCEEEEEeCCCeEEEEECCCCC---------CCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEE
Q 018860 104 IVRACSFSEDTHLLLTGGMEKILRIFDLNRPD---------APPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWD 174 (349)
Q Consensus 104 ~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd 174 (349)
.++.+++++...++++|+.++ +++|++.... ........+++ |..++| ++.+|+.+ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f---d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF---HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE---ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE---CCCEEEEE-cCCcEEEEE
Confidence 578999999999999999985 5669864221 11112334666 999999 45556566 669999999
Q ss_pred CCCCceEEee-cCCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEE
Q 018860 175 VRSGEIVQTL-ETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVR 253 (349)
Q Consensus 175 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 253 (349)
+++....... .+..++..+.+.+.. ++++..||.|.+||+....... ....+.+++|+|+ + ++.|..||+++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpk-G--~~vg~~dg~i~ 185 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNS-Q--LAVLLKDRSFQ 185 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSS-E--EEEEETTSCEE
T ss_pred chhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCC-c--eEEEEcCCcEE
Confidence 9876543333 234467777776553 6677889999999998776643 2346889999986 4 78899999999
Q ss_pred EEeCCCCcE--EEEe------c---CCCcceeEEEEccCCCeEEE
Q 018860 254 FFDFHTGNE--IACN------K---GHHGPVHCVRFSPGGESYAS 287 (349)
Q Consensus 254 v~d~~~~~~--~~~~------~---~h~~~i~~l~~sp~~~~l~s 287 (349)
+|+...++. ..++ . +|...|.++.|.+++.+|++
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 998877664 4444 2 47899999999999998876
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.33 E-value=1.2e-09 Score=95.08 Aligned_cols=233 Identities=9% Similarity=-0.016 Sum_probs=148.4
Q ss_pred eEEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEEC
Q 018860 53 WIGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDL 131 (349)
Q Consensus 53 ~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~ 131 (349)
.+..+..+........|+++++ .+++...++.|..|+. +++......+...+..++++++|+++++...++.|.+|+.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 3444545556678899999988 6677778899999998 4554333345567899999999997776666788999987
Q ss_pred CCCCCCCceeccC-----CCCeEEEEEecCCCeEEEE----eeC-------------CCeEEEEECCCCceEEeecCCCC
Q 018860 132 NRPDAPPREVDRS-----PGSVRTVAWLHSDQTILST----CTD-------------MGGVRLWDVRSGEIVQTLETKSP 189 (349)
Q Consensus 132 ~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~l~~----~~~-------------dg~v~vwd~~~~~~~~~~~~~~~ 189 (349)
+ .. ...+... ...+..+.+.+++. +.++ +.. .+.|..||..+++..... ....
T Consensus 115 ~-g~--~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~ 189 (305)
T 3dr2_A 115 D-GQ--AHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH 189 (305)
T ss_dssp T-SC--EEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS
T ss_pred C-CC--EEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC
Confidence 4 22 1111110 12345677776554 5443 221 257888888777654433 3334
Q ss_pred eeEEEEcCCCcEEEEe-cC------CeEEEEecCCceee--EEE-cC-CCceEEeeecCCCCCEEEEecCCCeEEEEeCC
Q 018860 190 VTSAEVSQDGRYITTA-DG------STVKFWDANHFGLV--KSY-NM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258 (349)
Q Consensus 190 v~~~~~~~~~~~l~~~-~d------~~i~iwd~~~~~~~--~~~-~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 258 (349)
.+.++++|+++.|..+ .. +.|..||+...... +.+ .. ...+..+++.+. ++ +.+++.+ .|.+|+.
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~-G~-lwv~~~~-gv~~~~~- 265 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRG-GW-LWSSSGT-GVCVFDS- 265 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTT-SC-EEECCSS-EEEEECT-
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCC-CC-EEEecCC-cEEEECC-
Confidence 5788999999865443 33 68999998654311 111 11 122334566653 56 4444444 5999998
Q ss_pred CCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEE
Q 018860 259 TGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRI 296 (349)
Q Consensus 259 ~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~v 296 (349)
.++.+..+..+. .+.+++|+|+++.|..++.++..++
T Consensus 266 ~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 266 DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 566666665444 5889999999988887777654444
No 219
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.32 E-value=9.5e-10 Score=99.60 Aligned_cols=238 Identities=12% Similarity=0.042 Sum_probs=155.8
Q ss_pred eEEEeecCCCccEEEEEe----------cCCCeEEEeCCCCCeEEEeecc-------cCCeEEEEECCCCCeeEEeeC--
Q 018860 21 DLFYSPITPDGFFLISAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDTNALRAASASA-- 81 (349)
Q Consensus 21 ~~~fs~~~~~~~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~s~-- 81 (349)
.+.||| ||++|..+. .++.+.++|..+++.++++.-. ...-..+.|++|+++|..+..
T Consensus 122 gia~Sp---Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAE---DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp EEEECT---TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS
T ss_pred ceEECC---CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC
Confidence 788887 899888776 3678999999999998887521 112345799999999998874
Q ss_pred CCeEEEEECCCCCEEEEeccCCeEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCCCC---ceeccCCCCe-EEEEEecC
Q 018860 82 DFSAKVWDALTGDVLHSFEHKHIVRACSFSEDT-HLLLTGGMEKILRIFDLNRPDAPP---REVDRSPGSV-RTVAWLHS 156 (349)
Q Consensus 82 D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~i~lwd~~~~~~~~---~~~~~~~~~i-~~~~~~~~ 156 (349)
++.|.+.|..+++.+..+.-... ....|++ ..+++.+.|+.+.+.++...+... ..+.....++ ..+.+.+.
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~d 275 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLR 275 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTT
T ss_pred CCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCC
Confidence 57899999999998888865432 1222322 344444555555555552211100 0010001111 12345666
Q ss_pred CCeEEEEeeCCCeEEEEECCCCceE--EeecC-----------CCCeeEEEEcCCCcEEEEec-----------CCeEEE
Q 018860 157 DQTILSTCTDMGGVRLWDVRSGEIV--QTLET-----------KSPVTSAEVSQDGRYITTAD-----------GSTVKF 212 (349)
Q Consensus 157 ~~~~l~~~~~dg~v~vwd~~~~~~~--~~~~~-----------~~~v~~~~~~~~~~~l~~~~-----------d~~i~i 212 (349)
+..++... ..+.|.+.|+..+... ..+.. ......+.++|++..+.... ++.|.+
T Consensus 276 g~~~~~~s-~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsV 354 (426)
T 3c75_H 276 SGRLVWPT-YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVV 354 (426)
T ss_dssp TCEEEEEB-TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCEEEEEe-CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEE
Confidence 66655554 4589999998765421 11110 11122367899876554321 247999
Q ss_pred EecCCceeeEEEcCCCceEEeeecCCCCC-EEEEec-CCCeEEEEeCCCCcEEEEe
Q 018860 213 WDANHFGLVKSYNMPCTIESASLEPKYGN-KFVAGG-EDMWVRFFDFHTGNEIACN 266 (349)
Q Consensus 213 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~d~~i~v~d~~~~~~~~~~ 266 (349)
+|+.+.+.+..+........+.+.|+ ++ +++++. .++.|.++|+.+++.+..+
T Consensus 355 ID~~T~kvv~~I~vg~~P~gia~spD-g~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 355 LNAETGERINKIELGHEIDSINVSQD-AEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EETTTCCEEEEEEEEEEECEEEECCS-SSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EECCCCeEEEEEECCCCcCeEEEccC-CCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99999999998887777788899986 55 666665 6999999999999998876
No 220
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.30 E-value=4.1e-09 Score=94.46 Aligned_cols=258 Identities=10% Similarity=0.036 Sum_probs=162.1
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeeccc---------CCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEecc
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEGHK---------GAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEH 101 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~---------~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~ 101 (349)
+..|..++.++.+..+|.++++.+..++... ..+.+. ...++..++.++.++.|..+|..+|+.+-.+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 4467788889999999999998876665432 223222 222345677888999999999999998766653
Q ss_pred CCeEEE-EEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCe------EEEEEecCCCeEEEEeeCCCeEEEEE
Q 018860 102 KHIVRA-CSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSV------RTVAWLHSDQTILSTCTDMGGVRLWD 174 (349)
Q Consensus 102 ~~~v~~-~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i------~~~~~~~~~~~~l~~~~~dg~v~vwd 174 (349)
...+.+ ... .+..++.++.++.+..+|..+.+.... .... ..+ ..... .++.++ .+..++.+..+|
T Consensus 132 ~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~-~~~~-~~~~~~~~~~~~~~--~~~~v~-~g~~~g~l~~~d 204 (376)
T 3q7m_A 132 AGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWT-VNLD-MPSLSLRGESAPTT--AFGAAV-VGGDNGRVSAVL 204 (376)
T ss_dssp SSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE-EECC-C-----CCCCCCEE--ETTEEE-ECCTTTEEEEEE
T ss_pred CCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEE-EeCC-CCceeecCCCCcEE--ECCEEE-EEcCCCEEEEEE
Confidence 322211 111 244777788899999999866543211 1111 111 11111 134444 455668999999
Q ss_pred CCCCceEEeecCCCC-----------eeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEE
Q 018860 175 VRSGEIVQTLETKSP-----------VTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKF 243 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (349)
.++|+.+-......+ +...-...++.+++++.++.+..+|..+++.+....... ...... .+..+
T Consensus 205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~---~~~~l 280 (376)
T 3q7m_A 205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV---DGNRI 280 (376)
T ss_dssp TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE---ETTEE
T ss_pred CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE---ECCEE
Confidence 999988765543211 000001124556666678899999999888776655433 222222 25678
Q ss_pred EEecCCCeEEEEeCCCCcEEEEecC-CCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 244 VAGGEDMWVRFFDFHTGNEIACNKG-HHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 244 ~~~~~d~~i~v~d~~~~~~~~~~~~-h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
+.++.++.+..+|..+++.+-.... ....+.+... .+..|+.++.+|.|..+|....
T Consensus 281 ~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 281 YLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDG 338 (376)
T ss_dssp EEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTC
T ss_pred EEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCC
Confidence 8888899999999999988655441 2222333333 2467888999999999997654
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.29 E-value=1.3e-08 Score=89.47 Aligned_cols=221 Identities=9% Similarity=0.017 Sum_probs=141.4
Q ss_pred eeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEE
Q 018860 19 VVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHS 98 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~ 98 (349)
.-...|+| .++.++++...++.|..|+..+++. ..+. +...+.++++++++.++++. .+ .|.+||..+++....
T Consensus 51 ~egp~~~~--~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDP--ASGTAWWFNILERELHELHLASGRK-TVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEET--TTTEEEEEEGGGTEEEEEETTTTEE-EEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEE
T ss_pred CcCCeEeC--CCCEEEEEECCCCEEEEEECCCCcE-EEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEE
Confidence 34667886 1356677777788999999887654 3333 34578999999999877754 44 499999988876543
Q ss_pred ecc-----CCeEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 018860 99 FEH-----KHIVRACSFSEDTHLLLTGGME----KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGG 169 (349)
Q Consensus 99 ~~~-----~~~v~~~~~s~~~~~l~s~~~d----~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 169 (349)
... ...++.++++|+|++.++...+ ....+|.++ ... ...+.........++|++++..++++...++.
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGK-VTKLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTE-EEEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCc-EEEeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 322 2368899999999977765421 234555544 221 11222222346788898877767666666689
Q ss_pred EEEEECC--CC-ce-----EEeecC-CCCeeEEEEcCCCcEEEEe-cCCeEEEEecCCceeeEEEcCCC-ceEEeeecCC
Q 018860 170 VRLWDVR--SG-EI-----VQTLET-KSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPC-TIESASLEPK 238 (349)
Q Consensus 170 v~vwd~~--~~-~~-----~~~~~~-~~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~ 238 (349)
|.+||+. ++ .. ...+.. ......+.+.++|.++++. .++.|..||. +.+.+..+..+. .+.+++|...
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~ 281 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGP 281 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEEST
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecC
Confidence 9999985 55 32 222221 2335678889999877665 4688999998 455666666554 4667777622
Q ss_pred CCCEE-EEecC
Q 018860 239 YGNKF-VAGGE 248 (349)
Q Consensus 239 ~~~~~-~~~~~ 248 (349)
+++.+ ++...
T Consensus 282 d~~~L~vt~~~ 292 (326)
T 2ghs_A 282 DASRLLVTSAR 292 (326)
T ss_dssp TSCEEEEEEBC
T ss_pred CCCEEEEEecC
Confidence 34444 44333
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.29 E-value=3.7e-09 Score=91.99 Aligned_cols=229 Identities=10% Similarity=0.064 Sum_probs=146.9
Q ss_pred CCCceeeEEEeecCCCcc-EEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCC
Q 018860 15 HSRPVVDLFYSPITPDGF-FLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG 93 (349)
Q Consensus 15 h~~~v~~~~fs~~~~~~~-~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~ 93 (349)
+..-.-...|+| +|+ ++++...++.+..|+. +++ +..+..+...+..++++++++++++...++.|.+|+.. +
T Consensus 43 ~~~~~egp~~~~---~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 43 QATWSEGPAWWE---AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp CCSSEEEEEEEG---GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCcCccCCeEeC---CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 334445678887 777 6677778889999987 454 45666677788999999999866665667889999986 5
Q ss_pred CEEEEecc-----CCeEEEEEEcCCCCEEEE----EeC-------------CCeEEEEECCCCCCCCceeccCCCCeEEE
Q 018860 94 DVLHSFEH-----KHIVRACSFSEDTHLLLT----GGM-------------EKILRIFDLNRPDAPPREVDRSPGSVRTV 151 (349)
Q Consensus 94 ~~~~~~~~-----~~~v~~~~~s~~~~~l~s----~~~-------------d~~i~lwd~~~~~~~~~~~~~~~~~i~~~ 151 (349)
........ ...++.+++.++|++.++ |.. .+.|..||..+.. ...+. .......+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~--~~~~~-~~~~p~gl 193 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP--LQRMA-DLDHPNGL 193 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC--CEEEE-EESSEEEE
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc--EEEEe-cCCCCcce
Confidence 54332221 134567999999998887 432 2345555543322 22222 33456788
Q ss_pred EEecCCCeEEEEeeC-----CCeEEEEECCCCceE--Eeec--CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeE
Q 018860 152 AWLHSDQTILSTCTD-----MGGVRLWDVRSGEIV--QTLE--TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVK 222 (349)
Q Consensus 152 ~~~~~~~~~l~~~~~-----dg~v~vwd~~~~~~~--~~~~--~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~ 222 (349)
+|+|++..++++... .+.|.+||+..+... ..+. .......+.+.++|++.++.. +.|.+|+.. ++.+.
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~-~gv~~~~~~-g~~~~ 271 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG-TGVCVFDSD-GQLLG 271 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-SEEEEECTT-SCEEE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-CcEEEECCC-CCEEE
Confidence 998877666555443 268999998754321 1111 122234678899999776664 459999984 55666
Q ss_pred EEcCCCceEEeeecCCCCCEEEEecCCCeEEEEe
Q 018860 223 SYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFD 256 (349)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d 256 (349)
.+..+..+..++|.+ +++.|+.++.+ .+..++
T Consensus 272 ~~~~~~~~~~~~f~~-d~~~L~it~~~-~l~~~~ 303 (305)
T 3dr2_A 272 HIPTPGTASNCTFDQ-AQQRLFITGGP-CLWMLP 303 (305)
T ss_dssp EEECSSCCCEEEECT-TSCEEEEEETT-EEEEEE
T ss_pred EEECCCceeEEEEeC-CCCEEEEEcCC-eEEEEE
Confidence 666666677788875 46666666555 344433
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.28 E-value=3.6e-09 Score=94.83 Aligned_cols=256 Identities=14% Similarity=0.082 Sum_probs=160.7
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEE----
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVR---- 106 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~---- 106 (349)
+..|+.++.++.+..+|.++++.+..++..........+. +..++.++.++.|..+|..+|+.+..+.....+.
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 3467778899999999999999877776543222112222 3367788889999999999999887765433321
Q ss_pred --EEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCC---------eEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 018860 107 --ACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGS---------VRTVAWLHSDQTILSTCTDMGGVRLWDV 175 (349)
Q Consensus 107 --~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~---------i~~~~~~~~~~~~l~~~~~dg~v~vwd~ 175 (349)
.... .+..++.++.++.+..+|..+.+.........+.. +...... .++.+++ ++.++.+..+|.
T Consensus 181 ~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~v~~-~~~~g~l~~~d~ 256 (376)
T 3q7m_A 181 ESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGVVFA-LAYNGNLTALDL 256 (376)
T ss_dssp CCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-ETTEEEE-ECTTSCEEEEET
T ss_pred CCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-ECCEEEE-EecCcEEEEEEC
Confidence 1111 24567778889999999986544321111110000 0000001 2344444 445689999999
Q ss_pred CCCceEEeecCCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcC-CC-ceEEeeecCCCCCEEEEecCCCeEE
Q 018860 176 RSGEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM-PC-TIESASLEPKYGNKFVAGGEDMWVR 253 (349)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~d~~i~ 253 (349)
++|+.+-...... ...+... ++.+++++.++.+..+|..+++.+..... .. ....... .+..++.++.++.++
T Consensus 257 ~tG~~~w~~~~~~-~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~---~~~~l~v~~~~g~l~ 331 (376)
T 3q7m_A 257 RSGQIMWKRELGS-VNDFIVD-GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL---YNGNLVVGDSEGYLH 331 (376)
T ss_dssp TTCCEEEEECCCC-EEEEEEE-TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE---ETTEEEEECTTSEEE
T ss_pred CCCcEEeeccCCC-CCCceEE-CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE---ECCEEEEEeCCCeEE
Confidence 9998776555432 3333332 55666667788999999999887765542 11 1112222 256788899999999
Q ss_pred EEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 254 FFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 254 v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
++|..+++.+.........+.+.... .+..|+.++.+|.|..|+
T Consensus 332 ~~d~~tG~~~~~~~~~~~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 332 WINVEDGRFVAQQKVDSSGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEETTTCCEEEEEECCTTCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred EEECCCCcEEEEEecCCCcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 99999999876655433333322221 245788899999999886
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.27 E-value=7.2e-10 Score=98.29 Aligned_cols=236 Identities=10% Similarity=0.003 Sum_probs=150.1
Q ss_pred CCeEEEEECCCCCeeEEee--CCCeEEEEECCCCCEEEEec--------cCCeEEEEEEcCCCCEEEEEeC-----CCeE
Q 018860 62 GAVWSCCLDTNALRAASAS--ADFSAKVWDALTGDVLHSFE--------HKHIVRACSFSEDTHLLLTGGM-----EKIL 126 (349)
Q Consensus 62 ~~v~~~~~~~~~~~l~s~s--~D~~i~vWd~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~s~~~-----d~~i 126 (349)
.....++++++++.+++.. .++.++||.+.+++. ..+. +-..+..+++.+++++.++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5688999999999888864 234366776655543 3221 2356899999999887666443 5789
Q ss_pred EEEECCCCCCCCc-eec----cCCCCeEEEEEecCCCeEEEEee---CCCeEEEEECCCCceEEeecCC-----------
Q 018860 127 RIFDLNRPDAPPR-EVD----RSPGSVRTVAWLHSDQTILSTCT---DMGGVRLWDVRSGEIVQTLETK----------- 187 (349)
Q Consensus 127 ~lwd~~~~~~~~~-~~~----~~~~~i~~~~~~~~~~~~l~~~~---~dg~v~vwd~~~~~~~~~~~~~----------- 187 (349)
.+||+.+.+.... .+. .+...+..+++.+.++.++++.. .++.|.+||+.+++....+..+
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 9999875432111 111 11234578888877677766655 5689999999888765544220
Q ss_pred -------------------CCeeEEEEcCCCcEEEEe-c-CCeEEEEecC---Cce--------eeEEEcCCCceEEeee
Q 018860 188 -------------------SPVTSAEVSQDGRYITTA-D-GSTVKFWDAN---HFG--------LVKSYNMPCTIESASL 235 (349)
Q Consensus 188 -------------------~~v~~~~~~~~~~~l~~~-~-d~~i~iwd~~---~~~--------~~~~~~~~~~~~~~~~ 235 (349)
.....++++|+++.|..+ . ...+..++.. ... .+...........+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 125778999999766543 3 3445444432 100 0111111123345677
Q ss_pred cCCCCCEEEEecCCCeEEEEeCCCCcEEEEecC-CCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 236 EPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG-HHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 236 ~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~-h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
.+. ++.+++...++.|.+||..+++....... +-....+++|.+++.++++.+..+.+.+|+.
T Consensus 256 d~~-G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~~ 319 (343)
T 2qe8_A 256 DKD-HNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLNA 319 (343)
T ss_dssp CTT-CCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGBT
T ss_pred CCC-CCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccccc
Confidence 764 78888888999999999855654333222 2456889999999988888877666655653
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=2.6e-09 Score=103.23 Aligned_cols=255 Identities=10% Similarity=0.032 Sum_probs=161.8
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeecc-c----CCeEEEEECCCCCeeEEee-----CCCeEEEEECCCCCEEEEec
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEGH-K----GAVWSCCLDTNALRAASAS-----ADFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h-~----~~v~~~~~~~~~~~l~s~s-----~D~~i~vWd~~~~~~~~~~~ 100 (349)
+..|+.++.|+.+..+|..+++.+..++.+ . ..+.+.-.-.++..++..+ .++.|+.+|..+|+.+-.+.
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 457888899999999999999998888765 2 1121111112444444333 27999999999999876664
Q ss_pred cCCe---------------------------------EEEEEEcCCCCEEEEEeCCC-------------------eEEE
Q 018860 101 HKHI---------------------------------VRACSFSEDTHLLLTGGMEK-------------------ILRI 128 (349)
Q Consensus 101 ~~~~---------------------------------v~~~~~s~~~~~l~s~~~d~-------------------~i~l 128 (349)
.... ...+++.|++.+++.+..++ .|..
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A 287 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence 2110 12467888888888877664 4888
Q ss_pred EECCCCCCCCce-eccC-------CCCeEEEEEecCCC--eEEEEeeCCCeEEEEECCCCceEEeecCCC----------
Q 018860 129 FDLNRPDAPPRE-VDRS-------PGSVRTVAWLHSDQ--TILSTCTDMGGVRLWDVRSGEIVQTLETKS---------- 188 (349)
Q Consensus 129 wd~~~~~~~~~~-~~~~-------~~~i~~~~~~~~~~--~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~---------- 188 (349)
+|..+.+..... ...+ ......+....++. .+++.++.+|.+.++|.++|+.+..+....
T Consensus 288 lD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~ 367 (677)
T 1kb0_A 288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKH 367 (677)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTT
T ss_pred EECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCC
Confidence 888765432111 1111 11122222222221 567778888999999999999876553210
Q ss_pred --Ce------------------------eEEEEcCCCcEEEEe-c-----------------------------------
Q 018860 189 --PV------------------------TSAEVSQDGRYITTA-D----------------------------------- 206 (349)
Q Consensus 189 --~v------------------------~~~~~~~~~~~l~~~-~----------------------------------- 206 (349)
++ ..++++|++.++... .
T Consensus 368 g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 447 (677)
T 1kb0_A 368 GKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFN 447 (677)
T ss_dssp SCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEEC
T ss_pred CceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccc
Confidence 00 145677876665432 1
Q ss_pred --------CCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCC-CcceeEEE
Q 018860 207 --------GSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH-HGPVHCVR 277 (349)
Q Consensus 207 --------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h-~~~i~~l~ 277 (349)
.+.|..||+.+++.+-.+..........+.. .+..++.++.|+.+++||..+++.+..+... .....-+.
T Consensus 448 ~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~ 526 (677)
T 1kb0_A 448 AEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPST 526 (677)
T ss_dssp SSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE
T ss_pred cccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEE
Confidence 1679999999998887766544333333333 3667888899999999999999998776533 22334466
Q ss_pred EccCCCeEE
Q 018860 278 FSPGGESYA 286 (349)
Q Consensus 278 ~sp~~~~l~ 286 (349)
|.++|+.++
T Consensus 527 y~~~G~~~v 535 (677)
T 1kb0_A 527 YMVDGRQYV 535 (677)
T ss_dssp EEETTEEEE
T ss_pred EEeCCEEEE
Confidence 778886443
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.25 E-value=8.2e-10 Score=98.36 Aligned_cols=244 Identities=8% Similarity=-0.082 Sum_probs=159.1
Q ss_pred eEEEeecCCCccEEEEEe----------cCCCeEEEeCCCCCeEEEeeccc-------CCeEEEEECCCCCeeEEeeC--
Q 018860 21 DLFYSPITPDGFFLISAS----------KDSSPMLRNGETGDWIGTFEGHK-------GAVWSCCLDTNALRAASASA-- 81 (349)
Q Consensus 21 ~~~fs~~~~~~~~l~s~s----------~d~~i~iw~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~l~s~s~-- 81 (349)
.+.|+| ||+++..+. .++++.+||..+++.++++..+. ..-..++|+||+++|+.+..
T Consensus 69 ~i~~sp---Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 69 LAVAGH---SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp EEEECT---TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred ceEECC---CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 688987 899888886 47889999999999999987441 12356899999999998875
Q ss_pred CCeEEE--EECCCCCEEEEeccCCeEEEEEEcCCC-CEEEEEeCCCeEEEEECCC----CCCCC----ceeccCCCCeEE
Q 018860 82 DFSAKV--WDALTGDVLHSFEHKHIVRACSFSEDT-HLLLTGGMEKILRIFDLNR----PDAPP----REVDRSPGSVRT 150 (349)
Q Consensus 82 D~~i~v--Wd~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~i~lwd~~~----~~~~~----~~~~~~~~~i~~ 150 (349)
+..|.+ +|..+ +..+.-+.. ..+.|++ ..+++.+.|+.+.+.|+.. ..... ........+.
T Consensus 146 ~~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-- 217 (368)
T 1mda_H 146 SAAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-- 217 (368)
T ss_dssp SCEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--
T ss_pred CCeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--
Confidence 467888 99876 444432221 1223443 3344555677777777754 11110 0011111222
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECCCCc--eEEeecCC-----------CCeeEEEEcCCCcEEEEe-c-C--------
Q 018860 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGE--IVQTLETK-----------SPVTSAEVSQDGRYITTA-D-G-------- 207 (349)
Q Consensus 151 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~-----------~~v~~~~~~~~~~~l~~~-~-d-------- 207 (349)
. .+.++.++.... +.|.+.|+.++. .+..+... .....+.++|+++.+..+ . +
T Consensus 218 -~-~~~~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~ 293 (368)
T 1mda_H 218 -Q-ANYPGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA 293 (368)
T ss_dssp -E-ETTTTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE
T ss_pred -c-cccCCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC
Confidence 2 556666555554 889999986532 33322211 111226799998765432 2 2
Q ss_pred CeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEec-CCCeEEEEeCCCCcEEEEecCCCcceeEEEEcc
Q 018860 208 STVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGG-EDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSP 280 (349)
Q Consensus 208 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp 280 (349)
+.+.++|+.+.+.+..+........+.+.++....+++.. .++.|.++|+.+++.+..+..... .+.+++.+
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred CCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 3566999999998888777667788899986444677777 699999999999999988875543 35666653
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.21 E-value=1.2e-08 Score=98.85 Aligned_cols=252 Identities=14% Similarity=0.114 Sum_probs=159.6
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeecc--cCCeEEEEECC---CCCeeEEee-----CCCeEEEEECCCCCEEEEec
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEGH--KGAVWSCCLDT---NALRAASAS-----ADFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h--~~~v~~~~~~~---~~~~l~s~s-----~D~~i~vWd~~~~~~~~~~~ 100 (349)
+..|+.++.|+.+..+|.++|+.+..++.. ......+..+| ++..++..+ .|+.|+.||..+|+.+-.+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 446888999999999999999988777642 11111111111 455444333 37999999999999876654
Q ss_pred cC----C----------------------------eEEEEEEcCCCCEEEEEeCCCe-------------------EEEE
Q 018860 101 HK----H----------------------------IVRACSFSEDTHLLLTGGMEKI-------------------LRIF 129 (349)
Q Consensus 101 ~~----~----------------------------~v~~~~~s~~~~~l~s~~~d~~-------------------i~lw 129 (349)
.. . .-..+++.|++.+++.++.++. |..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 10 0 0125778888888998887763 8999
Q ss_pred ECCCCCCCCceecc--C-------CCCeEEEEEecCCC---eEEEEeeCCCeEEEEECCCCceEEeecCCC---------
Q 018860 130 DLNRPDAPPREVDR--S-------PGSVRTVAWLHSDQ---TILSTCTDMGGVRLWDVRSGEIVQTLETKS--------- 188 (349)
Q Consensus 130 d~~~~~~~~~~~~~--~-------~~~i~~~~~~~~~~---~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~--------- 188 (349)
|..+.+...+ ++. + ........... ++ .+++.++.+|.++++|.++|+.+...+...
T Consensus 281 D~~TG~~~W~-~~~~~~d~wd~~~~~~~~l~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~ 358 (689)
T 1yiq_A 281 NADTGEYVWH-YQTTPGDAWDYTATQHMILAELPI-DGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDM 358 (689)
T ss_dssp ETTTCCEEEE-EESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEET
T ss_pred EccCCceeEe-eecCCcccccccCCCCcEEEeecc-CCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCc
Confidence 9887653221 111 1 11111111111 23 256678888999999999999874322110
Q ss_pred -------------------------------CeeEEEEcCCCcEEEEe-c------------------------------
Q 018860 189 -------------------------------PVTSAEVSQDGRYITTA-D------------------------------ 206 (349)
Q Consensus 189 -------------------------------~v~~~~~~~~~~~l~~~-~------------------------------ 206 (349)
.-..++++|+..++... .
T Consensus 359 ~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 438 (689)
T 1yiq_A 359 KTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGM 438 (689)
T ss_dssp TTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECC
T ss_pred cCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccc
Confidence 01125677776555432 0
Q ss_pred ---------------CCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Q 018860 207 ---------------GSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHG 271 (349)
Q Consensus 207 ---------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~ 271 (349)
++.|..||+.+++.+-.+..........+.. .+..++.++.|+.+++||..+|+.+-.++...+
T Consensus 439 ~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~ 517 (689)
T 1yiq_A 439 MPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASG 517 (689)
T ss_dssp CCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCC
Confidence 3679999999998887766544333223333 367888899999999999999999876653322
Q ss_pred -ceeEEEEccCCCeE
Q 018860 272 -PVHCVRFSPGGESY 285 (349)
Q Consensus 272 -~i~~l~~sp~~~~l 285 (349)
...-+.|..+|+..
T Consensus 518 ~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 518 VMAAPVTYSVDGEQY 532 (689)
T ss_dssp CCSCCEEEEETTEEE
T ss_pred cccCceEEEECCEEE
Confidence 22446777888643
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.16 E-value=5e-07 Score=76.77 Aligned_cols=246 Identities=8% Similarity=-0.078 Sum_probs=149.5
Q ss_pred EEEEEecCCCeEEEeCCCCCe-----EEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEEEECCCCCEEEEecc-CCeE
Q 018860 33 FLISASKDSSPMLRNGETGDW-----IGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKVWDALTGDVLHSFEH-KHIV 105 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vWd~~~~~~~~~~~~-~~~v 105 (349)
+|+-+.. +.|+.++...... ...+.........+++++++. .+++-...+.|.+++..++.....+.. ....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 4444443 3566666554321 112222223467899998654 445555678999999977654443332 2467
Q ss_pred EEEEEcCCCCEE-EEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeC--CCeEEEEECCCCceEE
Q 018860 106 RACSFSEDTHLL-LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTD--MGGVRLWDVRSGEIVQ 182 (349)
Q Consensus 106 ~~~~~s~~~~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~--dg~v~vwd~~~~~~~~ 182 (349)
..+++.+++..| ++-...+.|.+++++.... .............+++.+.++.++.+... .+.|..+++... ...
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~ 159 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRR 159 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcE
Confidence 899999975544 4555678899999864321 11111122457888988877777666543 468888887532 222
Q ss_pred eec--CCCCeeEEEEcCCCcEEE-E-ecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCC
Q 018860 183 TLE--TKSPVTSAEVSQDGRYIT-T-ADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258 (349)
Q Consensus 183 ~~~--~~~~v~~~~~~~~~~~l~-~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 258 (349)
.+. .......+++++++..|. + ...+.|..+|...............+..++.. .+..+++....+.|.++|..
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCC
Confidence 221 223457889999765543 3 34688999998765433333322233445543 35555666677899999999
Q ss_pred CCcEEEEecCCC-cceeEEEEccCCC
Q 018860 259 TGNEIACNKGHH-GPVHCVRFSPGGE 283 (349)
Q Consensus 259 ~~~~~~~~~~h~-~~i~~l~~sp~~~ 283 (349)
+++.+..+.... .....+++.|++.
T Consensus 238 ~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 238 ISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCceEEEccccccccceeeecCccC
Confidence 999887775332 2467888888764
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.15 E-value=3.8e-11 Score=107.71 Aligned_cols=255 Identities=11% Similarity=0.042 Sum_probs=135.9
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccC--CeEEE
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHK--HIVRA 107 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~--~~v~~ 107 (349)
++..|++++.|+.+..||..+++.+..++. +.+.+..+..++..+++++.|+.|+.||..+|+.+..+... ..+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 466899999999999999999999888877 55666666677878888899999999999988876555422 11111
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCC
Q 018860 108 CSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK 187 (349)
Q Consensus 108 ~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 187 (349)
......+..+++++.|+.+..||..+.+.... +..+. ...+.|.++.++ .++.++.|+.||.++|+.+-.+...
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~-~~~~~----~~~~~p~~~~v~-~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQT-LSSAF----ADSLSPSTSLLY-LGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC---------------------------EE-EEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEE-ecCCC----cccccccCCEEE-EEecCCEEEEEECCCCCEEEeEecc
Confidence 00111345677888899999999876554322 22111 122344444444 5556699999999999865444321
Q ss_pred CCeeEEEEcC----CCcEEEEecCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEE----EEecCCCeEEEEeCCC
Q 018860 188 SPVTSAEVSQ----DGRYITTADGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKF----VAGGEDMWVRFFDFHT 259 (349)
Q Consensus 188 ~~v~~~~~~~----~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~i~v~d~~~ 259 (349)
. .....+.+ ++.+++++.++.+..||..+++.+..+.....+..+-....++..+ +.+ ++.++++|..+
T Consensus 160 ~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~~ld~~t 236 (369)
T 2hz6_A 160 D-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHINVA--VETLRYLTFMS 236 (369)
T ss_dssp E-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEEEE--HHHHHHHHHHH
T ss_pred c-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccceeec--ccceeeeehhc
Confidence 1 11122233 2567777789999999999998877766554433211111112211 111 22345555555
Q ss_pred Cc----EEEEecCCCcceeEEEEcc--CCCeEEEecCCCCEEEecCC
Q 018860 260 GN----EIACNKGHHGPVHCVRFSP--GGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 260 ~~----~~~~~~~h~~~i~~l~~sp--~~~~l~sgs~Dg~v~vW~~~ 300 (349)
|+ .+-... ..+.+. +| .+..|+.++.||.|...+..
T Consensus 237 G~~~~~~~W~~~-~~~~~~----sp~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 237 GEVGRITKWKYP-FPKETE----AKSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHTSCCC-CCCHHH----HHHHSEEEECBEECSSCEECCEEE
T ss_pred CCcccceeeeec-cCcccc----ccccccceEEEecccCCEEecCcc
Confidence 44 211111 011111 22 24567778888888887654
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.14 E-value=1.1e-09 Score=101.79 Aligned_cols=251 Identities=12% Similarity=0.073 Sum_probs=170.8
Q ss_pred eEEEeecCCCccEEEEEecCC-CeEEEeCCCCCeEEEeecc-cCCeEEEEE-C-CCCCeeEEee----------------
Q 018860 21 DLFYSPITPDGFFLISASKDS-SPMLRNGETGDWIGTFEGH-KGAVWSCCL-D-TNALRAASAS---------------- 80 (349)
Q Consensus 21 ~~~fs~~~~~~~~l~s~s~d~-~i~iw~~~~~~~~~~~~~h-~~~v~~~~~-~-~~~~~l~s~s---------------- 80 (349)
.+.|-.-.+||++|.....++ .+.+.|+++.++.+.++-. ......+++ + |++.+++.++
T Consensus 91 ~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~ 170 (595)
T 1fwx_A 91 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 170 (595)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred ccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccc
Confidence 455543445788887776655 5888899999988855432 244778887 5 8898888874
Q ss_pred --CCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCC---------------eEEEEECCCCCCCCceecc
Q 018860 81 --ADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEK---------------ILRIFDLNRPDAPPREVDR 143 (349)
Q Consensus 81 --~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~---------------~i~lwd~~~~~~~~~~~~~ 143 (349)
.++.+.+.|..+.+....+.-...-..++++|+|+++++.+.+. .|.+.|.....
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~-------- 242 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE-------- 242 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH--------
T ss_pred cccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee--------
Confidence 45689999999988888776433446678999999999888653 12333321000
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCC--Cce-EEeecCCCCeeEEEEcCCCcEEEEec--CCeEEEEecCCc
Q 018860 144 SPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS--GEI-VQTLETKSPVTSAEVSQDGRYITTAD--GSTVKFWDANHF 218 (349)
Q Consensus 144 ~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~--~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~--d~~i~iwd~~~~ 218 (349)
.+.+.+..... +.|.|.|.++ ++. +..++.......+.++|||+++.++. +.+|.++|+.+.
T Consensus 243 --------~~v~~Gk~~~i-----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 243 --------KAIAAGDYQEL-----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp --------HHHHHTCSEEE-----TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred --------EeccCCCeeEE-----CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 01122222221 4599999998 555 55665544557789999999887654 689999999865
Q ss_pred e------------eeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCC----------CcEEEEecCCCcce---
Q 018860 219 G------------LVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT----------GNEIACNKGHHGPV--- 273 (349)
Q Consensus 219 ~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~----------~~~~~~~~~h~~~i--- 273 (349)
. ..........+..++|+++ +..+++.-.|+.|.+||+.. .+.+..+..|..+-
T Consensus 310 ~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~d-G~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~ 388 (595)
T 1fwx_A 310 DAVFYENADPRSAVVAEPELGLGPLHTAFDGR-GNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK 388 (595)
T ss_dssp HHHHHSCCCGGGGEEECCBCCSCEEEEEECTT-SEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE
T ss_pred ccccccccCcccceEEEcCCCCCcceEEECCC-CeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce
Confidence 3 3334444556788899985 55566778899999999876 45666666554432
Q ss_pred --eEEEEccCCCeEEEe---cCCCC
Q 018860 274 --HCVRFSPGGESYASG---SEDGT 293 (349)
Q Consensus 274 --~~l~~sp~~~~l~sg---s~Dg~ 293 (349)
..+.++|||++|++. |.|+.
T Consensus 389 ~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 389 TVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp ETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred eccceEeCCCCCEEEEcCCCCcccc
Confidence 334568999999875 44654
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.13 E-value=8e-09 Score=90.46 Aligned_cols=251 Identities=16% Similarity=0.059 Sum_probs=152.9
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec-cCCeEEEE
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE-HKHIVRAC 108 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-~~~~v~~~ 108 (349)
+|. |..++.+ +..++. +++.+..+..+........+. +..|..++.++.|..+|.. ++...... ....+.++
T Consensus 70 ~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~ 142 (330)
T 3hxj_A 70 DGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATP 142 (330)
T ss_dssp TTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCC
T ss_pred CCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeee
Confidence 444 4445554 777775 455443333333222223333 4457778888999999988 77665554 33345566
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-C
Q 018860 109 SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-K 187 (349)
Q Consensus 109 ~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~ 187 (349)
...+++. +..++.++.+..+|.. ... ..........+.++...+ ++.+.++. +.|..+| .+++....... .
T Consensus 143 ~~~~~g~-l~vgt~~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~d~-~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~ 214 (330)
T 3hxj_A 143 IVSEDGT-IYVGSNDNYLYAINPD-GTE-KWRFKTNDAITSAASIGK-DGTIYFGS---DKVYAIN-PDGTEKWNFYAGY 214 (330)
T ss_dssp EECTTSC-EEEECTTSEEEEECTT-SCE-EEEEECSSCCCSCCEECT-TCCEEEES---SSEEEEC-TTSCEEEEECCSS
T ss_pred EEcCCCE-EEEEcCCCEEEEECCC-CCE-eEEEecCCCceeeeEEcC-CCEEEEEe---CEEEEEC-CCCcEEEEEccCC
Confidence 6676776 5557778889999876 221 122222222344444433 44444443 7899999 77766655543 2
Q ss_pred CCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcCCCce-EEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEe
Q 018860 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMPCTI-ESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACN 266 (349)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~ 266 (349)
..+.++...+++.+.+++.++.+..+|.. ...+..+...... ....+. .+..+..++.++.|..+|. +++.+...
T Consensus 215 ~~~~~~~~~~~g~l~v~t~~~gl~~~~~~-g~~~~~~~~~~~~~~~~~~~--~~g~l~v~t~~ggl~~~d~-~g~~~~~~ 290 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYVTSLDGHLYAINPD-GTEKWRFKTGKRIESSPVIG--NTDTIYFGSYDGHLYAINP-DGTEKWNF 290 (330)
T ss_dssp CCCSCCEECTTSCEEEEETTTEEEEECTT-SCEEEEEECSSCCCSCCEEC--TTSCEEEECTTCEEEEECT-TSCEEEEE
T ss_pred cceeceEECCCCeEEEEcCCCeEEEECCC-CCEeEEeeCCCCccccceEc--CCCeEEEecCCCCEEEECC-CCcEEEEE
Confidence 45677788888888888878888888853 4444444433222 223332 2456778888889999995 67766555
Q ss_pred cCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 267 KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 267 ~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
......+.++...+++. |..|+.+|.+++....
T Consensus 291 ~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 291 ETGSWIIATPVIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp ECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-
T ss_pred EcCCccccceEEcCCCE-EEEEcCCCeEEEEecc
Confidence 54556677888877776 5568999999998654
No 232
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.12 E-value=1.1e-08 Score=99.11 Aligned_cols=266 Identities=13% Similarity=0.066 Sum_probs=162.9
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeecccCC----------e-EEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEe
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEGHKGA----------V-WSCCLDTNALRAASASADFSAKVWDALTGDVLHSF 99 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~ 99 (349)
+..|..++.++.+.-+|..+|+.+..++.+... + ..+++ .+..++.++.|+.|..+|..+|+.+-.+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 346777888899999999999988877654321 0 11122 3457888889999999999999987665
Q ss_pred ccC---CeEEEEEEcC---CCCEEEEEe------CCCeEEEEECCCCCCCCceec-------------------------
Q 018860 100 EHK---HIVRACSFSE---DTHLLLTGG------MEKILRIFDLNRPDAPPREVD------------------------- 142 (349)
Q Consensus 100 ~~~---~~v~~~~~s~---~~~~l~s~~------~d~~i~lwd~~~~~~~~~~~~------------------------- 142 (349)
... .....+..+| ++. ++.++ .++.|..||..+.+...+...
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 432 1101111122 444 44443 368899999876653211110
Q ss_pred -----cCCCCeEEEEEecCCCeEEEEeeCCC-------------------eEEEEECCCCceEEeecC--C--------C
Q 018860 143 -----RSPGSVRTVAWLHSDQTILSTCTDMG-------------------GVRLWDVRSGEIVQTLET--K--------S 188 (349)
Q Consensus 143 -----~~~~~i~~~~~~~~~~~~l~~~~~dg-------------------~v~vwd~~~~~~~~~~~~--~--------~ 188 (349)
........+++.+..+.+++.. .++ .|.-||.++|+.+-.+.. + .
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~-~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGV-GNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEEC-CCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeecCCCCccccceeEcCCCCEEEEeC-CCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 0000112456677666655443 334 499999999998755542 1 1
Q ss_pred CeeEEEEcCCCc---EE-EEecCCeEEEEecCCceeeEEEcCCC------------------------------------
Q 018860 189 PVTSAEVSQDGR---YI-TTADGSTVKFWDANHFGLVKSYNMPC------------------------------------ 228 (349)
Q Consensus 189 ~v~~~~~~~~~~---~l-~~~~d~~i~iwd~~~~~~~~~~~~~~------------------------------------ 228 (349)
+........+|+ .+ .+..+|.+.++|..+++++.......
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 222222233554 44 44568999999999988774332211
Q ss_pred ----ceEEeeecCCCCCEEEEec---------------------------------------------CCCeEEEEeCCC
Q 018860 229 ----TIESASLEPKYGNKFVAGG---------------------------------------------EDMWVRFFDFHT 259 (349)
Q Consensus 229 ----~~~~~~~~~~~~~~~~~~~---------------------------------------------~d~~i~v~d~~~ 259 (349)
....++++|. ...+++.. .++.|+.||+.+
T Consensus 386 ~Gg~~w~~~a~dp~-~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t 464 (689)
T 1yiq_A 386 WGAHDWQPMSYNPD-TGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK 464 (689)
T ss_dssp TCSSCSSCCEEETT-TTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT
T ss_pred ccccCCCcceECCC-CCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC
Confidence 0012456664 34444431 147899999999
Q ss_pred CcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 260 GNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 260 ~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
++.+-....+ .++..-.++..+.+++.|+.||.|+.||...+
T Consensus 465 G~~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 465 QQAAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp TEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCeEeEccCC-CCccCccceECCCEEEEECCCCcEEEEECCCC
Confidence 9987555433 33444467778889999999999999998654
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.11 E-value=1e-08 Score=99.13 Aligned_cols=266 Identities=12% Similarity=0.072 Sum_probs=166.1
Q ss_pred cEEEEEecCCCeEEEeCCCCCeEEEeecccCC-----------eEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec
Q 018860 32 FFLISASKDSSPMLRNGETGDWIGTFEGHKGA-----------VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 32 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~-----------v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~ 100 (349)
..|..++.++.+.-+|..+|+.+..++..... ...+++ .+..|+.++.|+.+..+|..+|+.+-.+.
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 35677788899999999999988777643210 012233 35578888999999999999999887765
Q ss_pred cC------CeEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCCCCCceec--------------------------
Q 018860 101 HK------HIVRACSFSEDTHLLLTGGM------EKILRIFDLNRPDAPPREVD-------------------------- 142 (349)
Q Consensus 101 ~~------~~v~~~~~s~~~~~l~s~~~------d~~i~lwd~~~~~~~~~~~~-------------------------- 142 (349)
.. ..+.+.-.- .+..++.++. ++.|+.||..+.+...+...
T Consensus 156 ~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 156 TFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp TTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred CCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 32 112111011 2344555442 68999999876553211110
Q ss_pred -----cCCCCeEEEEEecCCCeEEEEeeCC------------------CeEEEEECCCCceEEeecC--C--------CC
Q 018860 143 -----RSPGSVRTVAWLHSDQTILSTCTDM------------------GGVRLWDVRSGEIVQTLET--K--------SP 189 (349)
Q Consensus 143 -----~~~~~i~~~~~~~~~~~~l~~~~~d------------------g~v~vwd~~~~~~~~~~~~--~--------~~ 189 (349)
........+++.+..+.+++...+. +.|..+|.++|+.+-.+.. + ..
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 314 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCC
Confidence 0000112456677766666544321 2599999999988755542 1 11
Q ss_pred eeEEEEcCCC---cEEE-EecCCeEEEEecCCceeeEEEcCCC-----------ce------------------------
Q 018860 190 VTSAEVSQDG---RYIT-TADGSTVKFWDANHFGLVKSYNMPC-----------TI------------------------ 230 (349)
Q Consensus 190 v~~~~~~~~~---~~l~-~~~d~~i~iwd~~~~~~~~~~~~~~-----------~~------------------------ 230 (349)
...+....+| ..+. +..++.+.++|..+++++..+.... .+
T Consensus 315 p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~ 394 (677)
T 1kb0_A 315 MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHN 394 (677)
T ss_dssp CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSC
T ss_pred cEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccC
Confidence 2222333466 3444 4568999999999998876654321 00
Q ss_pred -EEeeecCCCCCEEEEecC-------------------------------------------CCeEEEEeCCCCcEEEEe
Q 018860 231 -ESASLEPKYGNKFVAGGE-------------------------------------------DMWVRFFDFHTGNEIACN 266 (349)
Q Consensus 231 -~~~~~~~~~~~~~~~~~~-------------------------------------------d~~i~v~d~~~~~~~~~~ 266 (349)
..++++|. ...+++... .+.|..||+.+++.+-..
T Consensus 395 w~~~a~dp~-~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~ 473 (677)
T 1kb0_A 395 WHPMSFNPQ-TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV 473 (677)
T ss_dssp SSCCEEETT-TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE
T ss_pred CCCceEcCC-CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec
Confidence 13456664 445554322 278999999999986554
Q ss_pred cCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 267 KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 267 ~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
. +..+++...+++.+..++.++.||.+++||....
T Consensus 474 ~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 474 E-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp E-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred C-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 4 3345566677788888999999999999998654
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.10 E-value=7.4e-08 Score=81.35 Aligned_cols=202 Identities=11% Similarity=0.110 Sum_probs=136.8
Q ss_pred CEEEEeccCC--eEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 018860 94 DVLHSFEHKH--IVRACSFSEDTHLLLTGGM--EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGG 169 (349)
Q Consensus 94 ~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 169 (349)
+.+.++.|.. ....++|++++.+.++.+. ++.|+++|+.+.+.......+.......+++. ++.+..+...++.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE
T ss_pred eEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE
Confidence 4566777764 4689999998766666553 68999999986543222111111112234443 5577777777899
Q ss_pred EEEEECCCCceEEeecCC-CCeeEEEEcCCCcEEEE-ecCCeEEEEecCCceeeEEEcCCC------ceEEeeecCCCCC
Q 018860 170 VRLWDVRSGEIVQTLETK-SPVTSAEVSQDGRYITT-ADGSTVKFWDANHFGLVKSYNMPC------TIESASLEPKYGN 241 (349)
Q Consensus 170 v~vwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~-~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 241 (349)
+.++|..+.+.+.++... ..- ..+++|++.+.. ..++.|.++|..+.+.+..+.... .+..+.+. ++.
T Consensus 88 v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~ 163 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGE 163 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTE
T ss_pred EEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCE
Confidence 999999999999888654 222 335556654444 346899999999988887766432 23444554 355
Q ss_pred EEEEecCCCeEEEEeCCCCcEEEEecCC-------------CcceeEEEEccCCCe-EEEecCCCCEEEecCCC
Q 018860 242 KFVAGGEDMWVRFFDFHTGNEIACNKGH-------------HGPVHCVRFSPGGES-YASGSEDGTIRIWQTGP 301 (349)
Q Consensus 242 ~~~~~~~d~~i~v~d~~~~~~~~~~~~h-------------~~~i~~l~~sp~~~~-l~sgs~Dg~v~vW~~~~ 301 (349)
.++....++.|.+.|..+++.+..+.-. ......++|+|+++. ++++...++|.+-++..
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 5666667889999999999988776421 134589999999865 56788888888877644
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.09 E-value=4.8e-11 Score=107.03 Aligned_cols=204 Identities=15% Similarity=0.071 Sum_probs=107.8
Q ss_pred CCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCC-CCeEE
Q 018860 72 NALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSP-GSVRT 150 (349)
Q Consensus 72 ~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~-~~i~~ 150 (349)
++..+++++.|+.|+.||..+|+.+-.+.. ..+.+..+..++..+++++.|+.++.||..+.+... ....+. ..+.+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w-~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT-KLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSE-ECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee-eeeccCcccccc
Confidence 466889999999999999999999877765 445555556678788888899999999986544321 111100 00000
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcE-EEEecCCeEEEEecCCceeeEEEcCCCc
Q 018860 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRY-ITTADGSTVKFWDANHFGLVKSYNMPCT 229 (349)
Q Consensus 151 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~d~~i~iwd~~~~~~~~~~~~~~~ 229 (349)
.-....++. +..++.++.|+.||.++|+.+..+..... ..++|++.. ++++.++.|..||.++++.+..+....
T Consensus 86 sp~~~~~~~-v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 86 SPCRSSDGI-LYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred CceEecCCE-EEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 000012333 44555668999999999988766654432 234455544 455678999999999887655443211
Q ss_pred eEEeeecCC--CCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeE-EEEccCCC
Q 018860 230 IESASLEPK--YGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHC-VRFSPGGE 283 (349)
Q Consensus 230 ~~~~~~~~~--~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~-l~~sp~~~ 283 (349)
.....+... .+..+++++.|+.++.||..+++.+-... ...++.. .++++++.
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGL 216 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSC
T ss_pred ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCce
Confidence 111222211 12567778899999999999998865544 3344443 34455553
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.02 E-value=5.5e-08 Score=86.09 Aligned_cols=230 Identities=10% Similarity=0.036 Sum_probs=139.6
Q ss_pred CceeeEEEeecCCCccEEEEEec--CCCeEEEeCCCCCeEEEe-------ecccCCeEEEEECCCCCeeEEeeC-----C
Q 018860 17 RPVVDLFYSPITPDGFFLISASK--DSSPMLRNGETGDWIGTF-------EGHKGAVWSCCLDTNALRAASASA-----D 82 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~--d~~i~iw~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~l~s~s~-----D 82 (349)
..+..|+++| +|+++++... ++.+++|...+++. ..+ .+|-..+..++++++++++++-.. +
T Consensus 17 ~~p~~va~~~---~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTP---DGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECT---TSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECC---CCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 5678899986 8988888642 34356665544443 222 235567899999999876665433 5
Q ss_pred CeEEEEECCCCCEEEEeccC-------CeEEEEEEcCCC-CEEEEEe---CCCeEEEEECCCCCCCCceecc--------
Q 018860 83 FSAKVWDALTGDVLHSFEHK-------HIVRACSFSEDT-HLLLTGG---MEKILRIFDLNRPDAPPREVDR-------- 143 (349)
Q Consensus 83 ~~i~vWd~~~~~~~~~~~~~-------~~v~~~~~s~~~-~~l~s~~---~d~~i~lwd~~~~~~~~~~~~~-------- 143 (349)
..|.+||+.+++.++.+..+ ..+..+++++++ ...++.. .++.|.+||+..... .+.+..
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~-~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA-ARVLQGYPGIAPED 171 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-EEECTTCTTTSCCS
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-EEEecCCCcccccc
Confidence 78999999999877666421 346789999864 4445554 678899999864321 111111
Q ss_pred ---------------------CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECC---CCc-----e---EEeecCCCCee
Q 018860 144 ---------------------SPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR---SGE-----I---VQTLETKSPVT 191 (349)
Q Consensus 144 ---------------------~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~---~~~-----~---~~~~~~~~~v~ 191 (349)
....+..++|++++..+..+....+.+..++.. .+. . +..........
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 012357788888766666555554455555532 111 0 01111122345
Q ss_pred EEEEcCCCcEEEEe-cCCeEEEEecCCceeeEEEcCC--CceEEeeecCCCCCEEEEecCCCeE
Q 018860 192 SAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMP--CTIESASLEPKYGNKFVAGGEDMWV 252 (349)
Q Consensus 192 ~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i 252 (349)
.+++.++|.++++. .++.|.+||..+++.......+ ..+..+++.+. +.++++.+..+.+
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD-GYLYFDCNQLHHS 314 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT-SCEEEEECCGGGS
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCC-CcEEEEeCccccc
Confidence 67889999887665 4789999998444433333222 23567777763 6666666544433
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.99 E-value=1.2e-07 Score=79.14 Aligned_cols=189 Identities=11% Similarity=0.166 Sum_probs=125.3
Q ss_pred CEEEEeccC--CeEEEEEEcCCCCEEEEEeCCC--eEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 018860 94 DVLHSFEHK--HIVRACSFSEDTHLLLTGGMEK--ILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGG 169 (349)
Q Consensus 94 ~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~d~--~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 169 (349)
+.+..+.|. ...+.+.|+ ++.+..+.+.++ .|+.+|+.+.+.... .. .+.........+.++.+......++.
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~-~~-l~~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQ-IE-LGKRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEE-EE-CCTTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEE-Ee-cCCccceeEEEEeCCEEEEEEeeCCE
Confidence 356667665 356889998 677777888766 899999987553222 11 12223222122235566666667799
Q ss_pred EEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEec-CCeEEEEecCCceeeEEEcCCC------ceEEeeecCCCCCE
Q 018860 170 VRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPC------TIESASLEPKYGNK 242 (349)
Q Consensus 170 v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 242 (349)
+.++|..+.+.+.++.....-..+ +++++.|..++ ++.|.++|..+++.+..+.... .+..+.+. ++..
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~l 184 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEI 184 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEE
T ss_pred EEEEECccCcEEEEEECCCCceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEE
Confidence 999999999999988764322233 35565554443 6789999999998887765531 12234443 4666
Q ss_pred EEEecCCCeEEEEeCCCCcEEEEecCC------------CcceeEEEEccCCCeEEEec
Q 018860 243 FVAGGEDMWVRFFDFHTGNEIACNKGH------------HGPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 243 ~~~~~~d~~i~v~d~~~~~~~~~~~~h------------~~~i~~l~~sp~~~~l~sgs 289 (349)
++..-.++.|.+.|..+++.+..+... ....+.+||+|+++.|...+
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 655667889999999999988776421 13458899999887665444
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.97 E-value=2.1e-07 Score=78.53 Aligned_cols=201 Identities=11% Similarity=0.049 Sum_probs=136.2
Q ss_pred CeEEEeecccC--CeEEEEECCCCCeeEEeeC--CCeEEEEECCCCCEEEEeccCC--eEEEEEEcCCCCEEE-EEeCCC
Q 018860 52 DWIGTFEGHKG--AVWSCCLDTNALRAASASA--DFSAKVWDALTGDVLHSFEHKH--IVRACSFSEDTHLLL-TGGMEK 124 (349)
Q Consensus 52 ~~~~~~~~h~~--~v~~~~~~~~~~~l~s~s~--D~~i~vWd~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~-s~~~d~ 124 (349)
+.++++. |.. ....+.|++++...++.+. ++.|++.|..+++.+..+.-.. ....+++. +..|. +...++
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 3455663 432 3578999998766666553 6899999999999988875322 23345554 44454 445688
Q ss_pred eEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCC---C---CeeEEEEcCC
Q 018860 125 ILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK---S---PVTSAEVSQD 198 (349)
Q Consensus 125 ~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---~---~v~~~~~~~~ 198 (349)
.+.++|..+.+.. ..+......-..+ .++++.++++- .++.|.++|..+.+....+... . ..+.+.+. +
T Consensus 87 ~v~viD~~t~~v~-~~i~~g~~~g~gl--t~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 87 IGFIYDRRTLSNI-KNFTHQMKDGWGL--ATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp EEEEEETTTTEEE-EEEECCSSSCCEE--EECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EEEEEECCCCcEE-EEEECCCCCeEEE--EECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-C
Confidence 9999998754322 2221111112223 34666677665 4689999999999888777542 1 25667777 6
Q ss_pred CcEEEEe-cCCeEEEEecCCceeeEEEcCC--------------CceEEeeecCCCCCEEEEecCCCeEEEEeCCCC
Q 018860 199 GRYITTA-DGSTVKFWDANHFGLVKSYNMP--------------CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTG 260 (349)
Q Consensus 199 ~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~ 260 (349)
+++.+.. .++.|.+.|+.+++.+..+... ..+..+++.|...+.|+++.....+.+.++...
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 7655554 3689999999999998888653 245789999876677888888899988887543
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.97 E-value=3e-07 Score=82.75 Aligned_cols=215 Identities=12% Similarity=0.127 Sum_probs=139.4
Q ss_pred CCccEE-EEEecCCCeEEEeCCCC----CeEEEee--------cccCCeEEEEECCCCCeeEEeeCC------CeEEEEE
Q 018860 29 PDGFFL-ISASKDSSPMLRNGETG----DWIGTFE--------GHKGAVWSCCLDTNALRAASASAD------FSAKVWD 89 (349)
Q Consensus 29 ~~~~~l-~s~s~d~~i~iw~~~~~----~~~~~~~--------~h~~~v~~~~~~~~~~~l~s~s~D------~~i~vWd 89 (349)
.++++| +++..++.|.+.|..+. +.+++++ |-+ .=..+...|++ .++|+..+ +.|-+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 456665 55677788999998654 5666663 111 22456778999 77777766 7899999
Q ss_pred CCCCCEEEEeccC----CeEEEEEEcCCCCEEEEEe-------------------CCCeEEEEECCCCCCCCceeccC-C
Q 018860 90 ALTGDVLHSFEHK----HIVRACSFSEDTHLLLTGG-------------------MEKILRIFDLNRPDAPPREVDRS-P 145 (349)
Q Consensus 90 ~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~-------------------~d~~i~lwd~~~~~~~~~~~~~~-~ 145 (349)
.++++.+..+... ..-..+.|+|+++.+++.. ...+|.+||+.+.+. ...+... .
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~-~~tI~vg~~ 249 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR-IHSLTLGEE 249 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE-EEEEESCTT
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE-eeEEecCCC
Confidence 9999999988632 2234688899999999885 368899999975321 1122211 1
Q ss_pred -CCeEEEEE--ecCCCeEEEEee-----CCCeEEEEECCCCceE--Eee--cC-----------------CCCeeEEEEc
Q 018860 146 -GSVRTVAW--LHSDQTILSTCT-----DMGGVRLWDVRSGEIV--QTL--ET-----------------KSPVTSAEVS 196 (349)
Q Consensus 146 -~~i~~~~~--~~~~~~~l~~~~-----~dg~v~vwd~~~~~~~--~~~--~~-----------------~~~v~~~~~~ 196 (349)
....-+.| +|.+...++++. .+++|.+|....++.. +.+ .. ......+.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 12344545 677777777777 7788877665444321 111 11 1335678999
Q ss_pred CCCcEEEEec--CCeEEEEecC---CceeeEEEcCCC---------------ceEEeeecCCCCCEEEEec
Q 018860 197 QDGRYITTAD--GSTVKFWDAN---HFGLVKSYNMPC---------------TIESASLEPKYGNKFVAGG 247 (349)
Q Consensus 197 ~~~~~l~~~~--d~~i~iwd~~---~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~ 247 (349)
+|+++|.++. .+.|.+||+. +.+++....... ....+.++|+ +++++++.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD-Gk~LyVaN 399 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD-GRRVYVTN 399 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT-SSEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC-CCEEEEEc
Confidence 9999987653 6899999985 234444443321 2456777774 67776665
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.95 E-value=2.6e-07 Score=77.26 Aligned_cols=187 Identities=14% Similarity=0.184 Sum_probs=125.4
Q ss_pred CEEEEeccC--CeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEE
Q 018860 94 DVLHSFEHK--HIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVR 171 (349)
Q Consensus 94 ~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~ 171 (349)
+.+..+.|. ...+.+.|+ ++.+.++.+.++.|+.+|+.+.+..... .+...........++.+......++.+.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME---RLGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE---ECTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE---CCCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 345566654 356888887 4677788889999999999876654333 2223322112234556666666779999
Q ss_pred EEECCCCceEEeecCCCCeeEEEEcCCCcEEEEec-CCeEEEEecCCceeeEEEcCCC------ceEEeeecCCCCCEEE
Q 018860 172 LWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSYNMPC------TIESASLEPKYGNKFV 244 (349)
Q Consensus 172 vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 244 (349)
+||..+.+.+.++.....-..+ +++++.|..++ ++.|.++|..+++.+..+.... .+..+.+. ++..++
T Consensus 120 V~D~~Tl~~~~ti~~~~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lya 195 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYA 195 (268)
T ss_dssp EEETTTTEEEEEEECSSCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEE
T ss_pred EEECCcCcEEEEEeCCCceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEE
Confidence 9999999999988764332233 35566655544 7899999999998888776532 12333443 466565
Q ss_pred EecCCCeEEEEeCCCCcEEEEecCC-------------CcceeEEEEccCCCeE-EEe
Q 018860 245 AGGEDMWVRFFDFHTGNEIACNKGH-------------HGPVHCVRFSPGGESY-ASG 288 (349)
Q Consensus 245 ~~~~d~~i~v~d~~~~~~~~~~~~h-------------~~~i~~l~~sp~~~~l-~sg 288 (349)
..-.++.|.+.|..+++.+..+.-. ....+.+|++|+++.| +||
T Consensus 196 nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 196 NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5557889999999999988765321 1356889999986654 454
No 241
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.90 E-value=2.7e-06 Score=76.58 Aligned_cols=217 Identities=11% Similarity=0.067 Sum_probs=132.5
Q ss_pred CCCCeeE-EeeCCCeEEEEECCCC----CEEEEec-------cC-CeEEEEEEcCCCCEEEEEeCC------CeEEEEEC
Q 018860 71 TNALRAA-SASADFSAKVWDALTG----DVLHSFE-------HK-HIVRACSFSEDTHLLLTGGME------KILRIFDL 131 (349)
Q Consensus 71 ~~~~~l~-s~s~D~~i~vWd~~~~----~~~~~~~-------~~-~~v~~~~~s~~~~~l~s~~~d------~~i~lwd~ 131 (349)
.+.++|+ ++..+..|.|.|+.+. +..++++ .. ..-..+..+|+| +++++..+ +.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 5666555 5667899999998755 5566663 11 245667889999 77776555 78999998
Q ss_pred CCCCCCCcee-ccCC-CCeEEEEEecCCCeEEEEe------------------eCCCeEEEEECCCCceEEeecCC---C
Q 018860 132 NRPDAPPREV-DRSP-GSVRTVAWLHSDQTILSTC------------------TDMGGVRLWDVRSGEIVQTLETK---S 188 (349)
Q Consensus 132 ~~~~~~~~~~-~~~~-~~i~~~~~~~~~~~~l~~~------------------~~dg~v~vwd~~~~~~~~~~~~~---~ 188 (349)
.+.+...+.. ...+ ..-..+.|.|..+.++++. ....+|.+||+.+++.++++... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 7544221111 1111 1123466677666555442 23579999999999888888764 2
Q ss_pred CeeEEEE--cCCCcEE--EEe-----cCCeEEEEecCCce--eeEEEcC-------------------CCceEEeeecCC
Q 018860 189 PVTSAEV--SQDGRYI--TTA-----DGSTVKFWDANHFG--LVKSYNM-------------------PCTIESASLEPK 238 (349)
Q Consensus 189 ~v~~~~~--~~~~~~l--~~~-----~d~~i~iwd~~~~~--~~~~~~~-------------------~~~~~~~~~~~~ 238 (349)
....+.| +|+++++ ++. .+++|.+|....+. ..+.+.. ......+.++++
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 2344545 9999764 344 55678765543321 1121111 122455667775
Q ss_pred CCCEEE-EecCCCeEEEEeCCC---CcEEEEecCC-----------C---cceeEEEEccCCCeEEEec
Q 018860 239 YGNKFV-AGGEDMWVRFFDFHT---GNEIACNKGH-----------H---GPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 239 ~~~~~~-~~~~d~~i~v~d~~~---~~~~~~~~~h-----------~---~~i~~l~~sp~~~~l~sgs 289 (349)
+++|+ +.-..+.|.+||+.. .+.+..+.-. . +.-..++++|+|++|+.+.
T Consensus 332 -GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 -DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp -SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred -CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 55554 555688999999853 2344433211 0 1357899999999998776
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=5.6e-08 Score=85.02 Aligned_cols=250 Identities=13% Similarity=0.062 Sum_probs=152.2
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCC-eEEEE
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKH-IVRAC 108 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~-~v~~~ 108 (349)
+| .|..++.++.+..|+ .+++.+..+..+...+.++.+++++...+ ++.+ +..+|. +++.+..+.... .....
T Consensus 30 ~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~ 103 (330)
T 3hxj_A 30 NG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYF-GSDK--VYAINP-DGTEKWRFDTKKAIVSDF 103 (330)
T ss_dssp TS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECC-SSCE--EEEECC-CGGGGGGSCC-----CCE
T ss_pred CC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEE-ecCc--EEEECC-CCcEEEEEECCCCcccCc
Confidence 44 466788889999999 88887776666656667788887776444 4444 888886 554433332222 12222
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-C
Q 018860 109 SFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-K 187 (349)
Q Consensus 109 ~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~ 187 (349)
.+. +..+..++.++.+..+|.. ... ..........+.++...+ ++.+++ ++.++.|..+|.. ++....+.. .
T Consensus 104 ~~~--~~~l~v~t~~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~~~-~g~l~v-gt~~~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 104 TIF--EDILYVTSMDGHLYAINTD-GTE-KWRFKTKKAIYATPIVSE-DGTIYV-GSNDNYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp EEE--TTEEEEECTTSEEEEECTT-SCE-EEEEECSSCCCSCCEECT-TSCEEE-ECTTSEEEEECTT-SCEEEEEECSS
T ss_pred eEE--CCEEEEEecCCEEEEEcCC-CCE-EEEEcCCCceeeeeEEcC-CCEEEE-EcCCCEEEEECCC-CCEeEEEecCC
Confidence 232 4567778888889999876 322 112222222233344333 444444 4456899999998 776655543 2
Q ss_pred CCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcCC-CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEe
Q 018860 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMP-CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACN 266 (349)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~ 266 (349)
..+.++...+++.+++++ +.|..+| .++..+..+... ..+..+...+ +..+..++.++.+..+|. +++.+...
T Consensus 177 ~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~--~g~l~v~t~~~gl~~~~~-~g~~~~~~ 250 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISE--DGTIYVTSLDGHLYAINP-DGTEKWRF 250 (330)
T ss_dssp CCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECT--TSCEEEEETTTEEEEECT-TSCEEEEE
T ss_pred CceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECC--CCeEEEEcCCCeEEEECC-CCCEeEEe
Confidence 345566677788877666 7889999 555555444433 2233444443 335666777888888874 55655544
Q ss_pred cCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 267 KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 267 ~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
......+.++.+.+++ .|..++.+|.|..+|.
T Consensus 251 ~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP 282 (330)
T ss_dssp ECSSCCCSCCEECTTS-CEEEECTTCEEEEECT
T ss_pred eCCCCccccceEcCCC-eEEEecCCCCEEEECC
Confidence 4444444556666555 5667888888888875
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.88 E-value=9.5e-06 Score=68.75 Aligned_cols=204 Identities=9% Similarity=-0.060 Sum_probs=127.8
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCC-CeeEEeeCCCeEEEEECCCCCEE
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNA-LRAASASADFSAKVWDALTGDVL 96 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vWd~~~~~~~ 96 (349)
.+..++|+| .++...++-...+.|..++.........+...-.....+++++++ ...++-...+.|.+++.......
T Consensus 37 ~~~gi~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 37 VIIGLAFDC--VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEET--TTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred cEEEEEEec--CCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence 456788886 134444555556788888887554433333222456889999865 44555566789999998754332
Q ss_pred EEeccC-CeEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCCCCCceec-cCCCCeEEEEEecCCCeEEEEeeCCCeEE
Q 018860 97 HSFEHK-HIVRACSFSEDTHLLLTGGM---EKILRIFDLNRPDAPPREVD-RSPGSVRTVAWLHSDQTILSTCTDMGGVR 171 (349)
Q Consensus 97 ~~~~~~-~~v~~~~~s~~~~~l~s~~~---d~~i~lwd~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~~~~~dg~v~ 171 (349)
...... .....++++|++..|..+.. .+.|..++++... ...+. ........+++.+.++.+..+....+.|.
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~--~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN--RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC--CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC--cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 222222 45688999996555544443 3678888875422 12221 22345788999887788877777778999
Q ss_pred EEECCCCceEEeecCCCCeeEEEEcCCCcEEEEe-cCCeEEEEecCCceeeEEEcC
Q 018860 172 LWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNM 226 (349)
Q Consensus 172 vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~ 226 (349)
++|+........+........+++. .+.++.+. .++.|..+|..+++.+..+..
T Consensus 193 ~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 193 CLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred EEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 9999765443333332223455554 34444444 468999999988887777654
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.86 E-value=1.5e-06 Score=82.13 Aligned_cols=253 Identities=13% Similarity=0.053 Sum_probs=147.0
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeec--ccC--CeEE-EEECCCCCeeEEeeC-----CCeEEEEECCCCCEEEEec
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEG--HKG--AVWS-CCLDTNALRAASASA-----DFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~--h~~--~v~~-~~~~~~~~~l~s~s~-----D~~i~vWd~~~~~~~~~~~ 100 (349)
+..|+.++.|+.+..+|..+++.+..++. +.. .+.+ ..+ .++..++.++. ++.|..+|..+|+.+-.+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 34677788899999999999988766543 211 1211 111 14444443332 7999999999999876654
Q ss_pred cCCeE---------------------------------------EEEEEcCCCCEEEEEeCC----------------Ce
Q 018860 101 HKHIV---------------------------------------RACSFSEDTHLLLTGGME----------------KI 125 (349)
Q Consensus 101 ~~~~v---------------------------------------~~~~~s~~~~~l~s~~~d----------------~~ 125 (349)
..... ..+++.++...++.+..+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 22111 124555655566655432 25
Q ss_pred EEEEECCCCCCCCce-eccC--------CCCeEEEEEecCCC--eEEEEeeCCCeEEEEECCCCceEEeecCCC------
Q 018860 126 LRIFDLNRPDAPPRE-VDRS--------PGSVRTVAWLHSDQ--TILSTCTDMGGVRLWDVRSGEIVQTLETKS------ 188 (349)
Q Consensus 126 i~lwd~~~~~~~~~~-~~~~--------~~~i~~~~~~~~~~--~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~------ 188 (349)
|..+|..+.+...+. ...+ ..++. +....++. .+++.+..+|.+.+.|.++|+.+-......
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 888887765432111 1111 12222 11112222 356667778999999999998876543211
Q ss_pred --------Ce--------------------------eEEEEcCCCcEEEEe-----------------------------
Q 018860 189 --------PV--------------------------TSAEVSQDGRYITTA----------------------------- 205 (349)
Q Consensus 189 --------~v--------------------------~~~~~~~~~~~l~~~----------------------------- 205 (349)
++ ..++++|+..++...
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 11 124566665444321
Q ss_pred ---------cCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCc-ceeE
Q 018860 206 ---------DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHG-PVHC 275 (349)
Q Consensus 206 ---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~-~i~~ 275 (349)
.++.|..||+.+++.+-.+..........+.. .+..++.++.|+.+++||..+++.+-.++.... .-..
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 511 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSP 511 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeee
Confidence 24689999999988776665443322222222 256777799999999999999999876653221 1122
Q ss_pred EEEccCCCeEE
Q 018860 276 VRFSPGGESYA 286 (349)
Q Consensus 276 l~~sp~~~~l~ 286 (349)
+.+.++|+.++
T Consensus 512 ~~~~~~G~~yv 522 (571)
T 2ad6_A 512 MTYSFKGKQYI 522 (571)
T ss_dssp EEEEETTEEEE
T ss_pred EEEEECCEEEE
Confidence 34556776433
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.85 E-value=1.1e-05 Score=69.83 Aligned_cols=231 Identities=11% Similarity=-0.018 Sum_probs=135.0
Q ss_pred eEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCC-C-eEEEEE
Q 018860 53 WIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGME-K-ILRIFD 130 (349)
Q Consensus 53 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-~-~i~lwd 130 (349)
.+..+..+ .....+++++++..+++-...+.|..||..+ .....+........+++.++|+++++.... + .|..++
T Consensus 24 ~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 24 IITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLV 101 (306)
T ss_dssp EEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred EeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEc
Confidence 44455332 3467889999998777776889999999865 444445555678899999999976665433 2 355556
Q ss_pred CCCCCCCCceecc--CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCc--eEEe-------ec-C-CCCeeEEEEcC
Q 018860 131 LNRPDAPPREVDR--SPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGE--IVQT-------LE-T-KSPVTSAEVSQ 197 (349)
Q Consensus 131 ~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~--~~~~-------~~-~-~~~v~~~~~~~ 197 (349)
...... ..+.. .......++.. .++.++++....+.|.++|..+++ .... .. . ....+.+ ++
T Consensus 102 ~~~g~~--~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~ 176 (306)
T 2p4o_A 102 KSDGTV--ETLLTLPDAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR 176 (306)
T ss_dssp CTTSCE--EEEEECTTCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE
T ss_pred CCCCeE--EEEEeCCCccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc
Confidence 543221 11111 11122333332 345555555456899999987653 2110 00 0 1123344 77
Q ss_pred CCcEEEEe--cCCeEEEEecCC-cee--eEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEE--EecCCC
Q 018860 198 DGRYITTA--DGSTVKFWDANH-FGL--VKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIA--CNKGHH 270 (349)
Q Consensus 198 ~~~~l~~~--~d~~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~--~~~~h~ 270 (349)
++..|..+ ..+.|..||+.. +.. ...+.....+..+++.+ +++.+++....+.|.+||.. ++... .+....
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~ 254 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDV-EGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGV 254 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBT-TCCEEEECBTTCCEEEECTT-CCEEEEECGGGTC
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECC-CCCEEEEeCCCCeEEEECCC-CCEEEEeeccccc
Confidence 77655443 368899999864 221 12221112234566666 47777777778899999975 55432 233223
Q ss_pred cceeEEEEc---cCCCeEEEecCCC
Q 018860 271 GPVHCVRFS---PGGESYASGSEDG 292 (349)
Q Consensus 271 ~~i~~l~~s---p~~~~l~sgs~Dg 292 (349)
....+++|. |+++.|+.++..+
T Consensus 255 ~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 255 IGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TTEEEEEECCSTTTTTEEEEEECTT
T ss_pred CCceEEEEecccCCCCEEEEECCCC
Confidence 568899998 8877776555443
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.85 E-value=2.8e-06 Score=70.33 Aligned_cols=189 Identities=11% Similarity=0.089 Sum_probs=122.9
Q ss_pred CEEEEeccC--CeEEEEEEcCCCCEEEEEeCC--CeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 018860 94 DVLHSFEHK--HIVRACSFSEDTHLLLTGGME--KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGG 169 (349)
Q Consensus 94 ~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~d--~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 169 (349)
+.+..+.|. .....+.|++ +.+..+.+.+ ..|+.+|+.+.+.... .. .+...........++.+......++.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~-~~-l~~~~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQR-AE-VPPPYFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEE-EE-CCTTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEE-Ee-CCCCcceeEEEEeCCEEEEEEeeCCE
Confidence 456667765 4578999986 6666777765 4899999986543221 11 12222222112235666666667799
Q ss_pred EEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEe-cCCeEEEEecCCceeeEEEcCCC------ceEEeeecCCCCCE
Q 018860 170 VRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYNMPC------TIESASLEPKYGNK 242 (349)
Q Consensus 170 v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 242 (349)
+.++|..+.+.+.++.....-..++ +++..|..+ .++.|.++|..+++.++.+.... .+..+.+. ++..
T Consensus 87 v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~l 162 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGEL 162 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEE
T ss_pred EEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEE
Confidence 9999999999999987654323343 455544444 47889999999998887776532 12233332 4565
Q ss_pred EEEecCCCeEEEEeCCCCcEEEEecC-------------CCcceeEEEEccCCCeEEEec
Q 018860 243 FVAGGEDMWVRFFDFHTGNEIACNKG-------------HHGPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 243 ~~~~~~d~~i~v~d~~~~~~~~~~~~-------------h~~~i~~l~~sp~~~~l~sgs 289 (349)
++..-.+..|.+.|..+++.+..+.- -....+.+|++|+++.|...+
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 65555688999999999998876531 113568899999877654433
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.84 E-value=1.1e-06 Score=73.42 Aligned_cols=179 Identities=13% Similarity=0.169 Sum_probs=121.4
Q ss_pred ceeeEEEeecCCCccEEEEEecCC--CeEEEeCCCCCeEEEeecccCCe-EEEEECCCCCeeEEeeCCCeEEEEECCCCC
Q 018860 18 PVVDLFYSPITPDGFFLISASKDS--SPMLRNGETGDWIGTFEGHKGAV-WSCCLDTNALRAASASADFSAKVWDALTGD 94 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~--~i~iw~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~ 94 (349)
....+.|+ ++.+..|.+.+| .++.+|.++++.++.+....... ..+++..+ +..+....++.+.++|..+++
T Consensus 44 ftqGL~~~----~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~-~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 44 FTEGFFYR----NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKD-KIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEEE----TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETT-EEEEEESSSSEEEEEETTTCC
T ss_pred ccceEEEE----CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCC-EEEEEEeeCCEEEEEECccCc
Confidence 34688887 467777777776 89999999999998887544321 23444332 333344568999999999999
Q ss_pred EEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceec-c--CC-CCeEEEEEecCCCeEEEEeeCCCeE
Q 018860 95 VLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVD-R--SP-GSVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 95 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~-~--~~-~~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
.+.++..+. ....+++++..|+.+..+..|.++|..+.+....... . .+ ..++.+.|. ++.+.+....++.|
T Consensus 119 ~~~ti~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~I 194 (262)
T 3nol_A 119 QVRSFNYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNKI 194 (262)
T ss_dssp EEEEEECSS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEE
T ss_pred EEEEEECCC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCeE
Confidence 999987654 2234446777777666677899999875443222111 1 11 334567775 56777777777899
Q ss_pred EEEECCCCceEEeecCC-------------CCeeEEEEcCCCcEE-EEe
Q 018860 171 RLWDVRSGEIVQTLETK-------------SPVTSAEVSQDGRYI-TTA 205 (349)
Q Consensus 171 ~vwd~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l-~~~ 205 (349)
.+.|+++|+.+..+... ...+.++++|+++.| +++
T Consensus 195 ~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 99999999998877542 235788999876554 444
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.83 E-value=4.7e-05 Score=75.01 Aligned_cols=270 Identities=9% Similarity=0.071 Sum_probs=166.3
Q ss_pred eeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEe-ecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEE
Q 018860 19 VVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLH 97 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~ 97 (349)
|.++...+ +|.+. .++.++-+..|+..++++.... ..+...|.++..++++.+.+ +..++-+..||..+++...
T Consensus 175 i~~i~~d~---~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~ 249 (795)
T 4a2l_A 175 IASTLYRQ---GDQIY-IGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKN 249 (795)
T ss_dssp CEEEEEEE---TTEEE-EEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEE
T ss_pred eEEEEECC---CCCEE-EEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEE
Confidence 67777664 56544 4666556888887776654321 12356788888888886544 4444348889987765443
Q ss_pred Eec--------cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCc------eeccCCCCeEEEEEecCCCeEEEE
Q 018860 98 SFE--------HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR------EVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 98 ~~~--------~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~------~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
... ....|.++...++|.+.+ |+.+ -+.+|+......... ...-....|.++...+.+..++
T Consensus 250 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-- 325 (795)
T 4a2l_A 250 YLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWL-- 325 (795)
T ss_dssp ECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEE--
T ss_pred eecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEE--
Confidence 321 135699999998888655 4445 478888654321000 0011224588887665555444
Q ss_pred eeCCCeEEEEECCCCceEEeec-------CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEc--------C-C
Q 018860 164 CTDMGGVRLWDVRSGEIVQTLE-------TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYN--------M-P 227 (349)
Q Consensus 164 ~~~dg~v~vwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~--------~-~ 227 (349)
|+.++.|..|+..++....... ....|.++...+++.+.++..++.|..||..+........ . .
T Consensus 326 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~ 405 (795)
T 4a2l_A 326 GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGS 405 (795)
T ss_dssp EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSC
T ss_pred EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCC
Confidence 3445789999876654322111 1235888888889999888888789999987654433211 1 1
Q ss_pred CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEec----CCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 228 CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK----GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~----~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
..+.++...+ +++.+..|+.++-|.+||..+++...... .....|.++...+++.+.+.. .+| |.+|+..
T Consensus 406 ~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~~~~ 479 (795)
T 4a2l_A 406 NNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LSA-LVRFNPE 479 (795)
T ss_dssp SCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEEETT
T ss_pred ccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEEeCC
Confidence 2345555544 35536777777789999988776543221 234679999998888765544 344 7777754
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.82 E-value=4.1e-06 Score=80.81 Aligned_cols=255 Identities=13% Similarity=0.102 Sum_probs=152.6
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeeccc----CCeEE-EEECCCCCeeEEee-----CCCeEEEEECCCCCEEEEec
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEGHK----GAVWS-CCLDTNALRAASAS-----ADFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~----~~v~~-~~~~~~~~~l~s~s-----~D~~i~vWd~~~~~~~~~~~ 100 (349)
+..|+.++.|+.+..+|..+|+.+..++... ..+.+ ..+ .++..++..+ .++.|..+|..+|+.+-.+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 4467788899999999999999887776421 11111 011 1444444332 26899999999999877664
Q ss_pred cC----C----------------------------eEEEEEEcCCCCEEEEEeCCC-------------------eEEEE
Q 018860 101 HK----H----------------------------IVRACSFSEDTHLLLTGGMEK-------------------ILRIF 129 (349)
Q Consensus 101 ~~----~----------------------------~v~~~~~s~~~~~l~s~~~d~-------------------~i~lw 129 (349)
.. . ....+++.|+..+++.++.++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 0 012367888888888887665 38888
Q ss_pred ECCCCCCCCceec-cCC-------CCeEEEEEecCCC--eEEEEeeCCCeEEEEECCCCceEEeecCCC-----------
Q 018860 130 DLNRPDAPPREVD-RSP-------GSVRTVAWLHSDQ--TILSTCTDMGGVRLWDVRSGEIVQTLETKS----------- 188 (349)
Q Consensus 130 d~~~~~~~~~~~~-~~~-------~~i~~~~~~~~~~--~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~----------- 188 (349)
|..+.+...+... .|. .+.........+. .+++.++.+|.+.++|.++|+.+...+...
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 8876543221111 111 2222222222222 256677888999999999999874332110
Q ss_pred --C------------------------eeEEEEcCCCcEEEE-------------------------------------e
Q 018860 189 --P------------------------VTSAEVSQDGRYITT-------------------------------------A 205 (349)
Q Consensus 189 --~------------------------v~~~~~~~~~~~l~~-------------------------------------~ 205 (349)
+ -..++++|+..++.. .
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 0 011456665544321 0
Q ss_pred cCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcce-eEEEEccCCC-
Q 018860 206 DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPV-HCVRFSPGGE- 283 (349)
Q Consensus 206 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i-~~l~~sp~~~- 283 (349)
.++.|..||+.+++.+-.+..........+.. .+..++.++.|+.+++||..+++.+..++...... .-+.+..+|+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~ 514 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLST-AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQ 514 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEe-CCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEE
Confidence 13779999999998876665443322222222 36788889999999999999999987765432211 2234445665
Q ss_pred eEEE
Q 018860 284 SYAS 287 (349)
Q Consensus 284 ~l~s 287 (349)
+++.
T Consensus 515 yva~ 518 (668)
T 1kv9_A 515 YVAI 518 (668)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.81 E-value=4.9e-07 Score=87.24 Aligned_cols=266 Identities=12% Similarity=0.063 Sum_probs=157.2
Q ss_pred cEEEEEecCCCeEEEeCCCCCeEEEeecccCC----------e-EEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec
Q 018860 32 FFLISASKDSSPMLRNGETGDWIGTFEGHKGA----------V-WSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 32 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~ 100 (349)
..|..++.++.+.-+|..+++.+..++..... + ..+++ .+..++.++.|+.|..+|..+|+.+-.+.
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 35677888899999999999988777543211 0 11222 24467888899999999999999876654
Q ss_pred cCC--eEEEEEEcC--CCCEEEEEeC------CCeEEEEECCCCCCCCcee--ccCC-----------------------
Q 018860 101 HKH--IVRACSFSE--DTHLLLTGGM------EKILRIFDLNRPDAPPREV--DRSP----------------------- 145 (349)
Q Consensus 101 ~~~--~v~~~~~s~--~~~~l~s~~~------d~~i~lwd~~~~~~~~~~~--~~~~----------------------- 145 (349)
... ....+.-+| .+..++.+.. ++.|..+|..+.+...+.. ...+
T Consensus 145 ~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~ 224 (668)
T 1kv9_A 145 TTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWK 224 (668)
T ss_dssp CSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHH
T ss_pred cCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceee
Confidence 311 000000111 1334444432 5889999987654321110 0000
Q ss_pred -----CCeEEEEEecCCCeEEEEeeCCC-------------------eEEEEECCCCceEEeecCC----------CCee
Q 018860 146 -----GSVRTVAWLHSDQTILSTCTDMG-------------------GVRLWDVRSGEIVQTLETK----------SPVT 191 (349)
Q Consensus 146 -----~~i~~~~~~~~~~~~l~~~~~dg-------------------~v~vwd~~~~~~~~~~~~~----------~~v~ 191 (349)
.....+++.+..+.+++... ++ .|.-+|.++|+.+-.+... .+..
T Consensus 225 ~~~gg~~w~~~a~d~~~~~vy~~~~-~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 225 LGGGGTVWDSMAYDPELDLLYVGTG-NGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQIT 303 (668)
T ss_dssp HCEECCCCSCEEEETTTTEEEEECC-CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred eCCCCccccceEEcCCCCEEEEeCC-CCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcE
Confidence 01123566666665554433 23 4999999999887555431 2223
Q ss_pred EEEEcCCCc----EEEEecCCeEEEEecCCceeeEEEcCCCc-------------------------------------e
Q 018860 192 SAEVSQDGR----YITTADGSTVKFWDANHFGLVKSYNMPCT-------------------------------------I 230 (349)
Q Consensus 192 ~~~~~~~~~----~l~~~~d~~i~iwd~~~~~~~~~~~~~~~-------------------------------------~ 230 (349)
...+..+++ ++.+..++.+.++|..+++++........ .
T Consensus 304 ~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w 383 (668)
T 1kv9_A 304 LAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNW 383 (668)
T ss_dssp EEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCS
T ss_pred EEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCC
Confidence 333334664 34455689999999998887743322110 0
Q ss_pred EEeeecCCCCCEEEE------------------------------------ecCCCeEEEEeCCCCcEEEEecCCCccee
Q 018860 231 ESASLEPKYGNKFVA------------------------------------GGEDMWVRFFDFHTGNEIACNKGHHGPVH 274 (349)
Q Consensus 231 ~~~~~~~~~~~~~~~------------------------------------~~~d~~i~v~d~~~~~~~~~~~~h~~~i~ 274 (349)
..++++|.. ..++. ...++.|+.||..+++.+-....+ .+..
T Consensus 384 ~~~a~dp~~-g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~ 461 (668)
T 1kv9_A 384 HSMSFNPGT-GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWN 461 (668)
T ss_dssp SCCEEETTT-TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCC
T ss_pred CcceECCCC-CEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCc
Confidence 113455542 23222 113488999999999986444322 3344
Q ss_pred EEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 275 CVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 275 ~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
...+...+.+++.|+.||.|+.||....
T Consensus 462 ~~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 462 GGTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CceeEeCCCEEEEECCcccchhhhhhcC
Confidence 4455667888999999999999998644
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.79 E-value=7.8e-06 Score=71.38 Aligned_cols=230 Identities=13% Similarity=0.060 Sum_probs=138.8
Q ss_pred eEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec--------------------cCCeEEEEEEcC-CCCEEEEEeC
Q 018860 64 VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE--------------------HKHIVRACSFSE-DTHLLLTGGM 122 (349)
Q Consensus 64 v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~--------------------~~~~v~~~~~s~-~~~~l~s~~~ 122 (349)
-.++++++++.++.++..++.|..|+..+++...... ....+..+++.+ ++++++ +..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v-~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI-VDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-EET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-EEC
Confidence 3567889998878888889999999987665432211 012478899997 665554 444
Q ss_pred CCeEEEEECCCCCCCCceecc-----CCCCeEEEEEec-CCCeEEEEee----------------CCCeEEEEECCCCce
Q 018860 123 EKILRIFDLNRPDAPPREVDR-----SPGSVRTVAWLH-SDQTILSTCT----------------DMGGVRLWDVRSGEI 180 (349)
Q Consensus 123 d~~i~lwd~~~~~~~~~~~~~-----~~~~i~~~~~~~-~~~~~l~~~~----------------~dg~v~vwd~~~~~~ 180 (349)
.+.+..+|...... +.+.. .......+++.+ .+..+++... ..+.|..||..+++.
T Consensus 100 ~~~i~~~d~~~g~~--~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA--TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTEEEEECTTCEEC--EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCEEEEeCCCCEE--EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 45577887653211 11110 112356788776 5544443322 136789999877764
Q ss_pred EEeecCCCCeeEEEEcCCCcEEEEe--cCCeEEEEecCCce--eeEEE-cCCCceEEeeecCCCCCEEEEecC-------
Q 018860 181 VQTLETKSPVTSAEVSQDGRYITTA--DGSTVKFWDANHFG--LVKSY-NMPCTIESASLEPKYGNKFVAGGE------- 248 (349)
Q Consensus 181 ~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~iwd~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------- 248 (349)
..........+.++++++++.|..+ .++.|..|++.... ....+ ..+. +..+++.+. ++++++...
T Consensus 178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~-G~l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 178 TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD-GHFWVSSSEELDGNMH 255 (322)
T ss_dssp EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTT-SCEEEEEEEETTSSTT
T ss_pred EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCC-CCEEEEecCccccccc
Confidence 3322222234578999998755433 36789999986421 11111 2233 566777764 676666544
Q ss_pred ---CCeEEEEeCCCCcEEEEecCC----CcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 249 ---DMWVRFFDFHTGNEIACNKGH----HGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 249 ---d~~i~v~d~~~~~~~~~~~~h----~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
.+.|..+|.. ++.+..+... -..+.++++ .++.++++....+.|..+++.
T Consensus 256 ~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 256 GRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp SCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred CCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 4678888864 6666555432 245677777 466666666677888888764
No 252
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.78 E-value=0.00012 Score=72.01 Aligned_cols=268 Identities=10% Similarity=0.093 Sum_probs=164.6
Q ss_pred CCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeec-------ccCCeEEEEECCCCCeeEEeeCCCeEEEE
Q 018860 16 SRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEG-------HKGAVWSCCLDTNALRAASASADFSAKVW 88 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~s~D~~i~vW 88 (349)
...|.++...+ +|.+. .|+.++-+..|+..++++...... ....|.++..++++.. ..|..+ -|.+|
T Consensus 214 ~~~i~~i~~d~---~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~-Gl~~~ 287 (795)
T 4a2l_A 214 TKQIQAILQQS---PTRIW-VATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRL-WIGTFN-DLNIY 287 (795)
T ss_dssp CCCEEEEEEEE---TTEEE-EEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCE-EEEESS-CEEEE
T ss_pred CCeeEEEEEcC---CCCEE-EEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCE-EEEeCC-hhheE
Confidence 45677777664 55544 466554578888776654432211 2356999999988874 444445 58899
Q ss_pred ECCCCCEEEEec--------cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceec-------cCCCCeEEEEE
Q 018860 89 DALTGDVLHSFE--------HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVD-------RSPGSVRTVAW 153 (349)
Q Consensus 89 d~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~-------~~~~~i~~~~~ 153 (349)
|..++....... ....|.++...++|++- .|+.++-+..|+...... ..+. -....|.++..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~--~~~~~~~~~~~l~~~~V~~i~~ 364 (795)
T 4a2l_A 288 HEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLNYYHPIRNRF--KNIRNIPYKNSLSDNVVSCIVE 364 (795)
T ss_dssp ETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEEEECGGGGSS--EEECCCTTSSSCSCSSEEEEEE
T ss_pred cCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeEEeCCCcccc--eEEcCCCCCCCCCCCeeEEEEE
Confidence 987775544321 12569999999988755 466666688887543221 1110 12345788876
Q ss_pred ecCCCeEEEEeeCCCeEEEEECCCCceEEeec---------CCCCeeEEEEcCCCc-EEEEecCCeEEEEecCCceeeEE
Q 018860 154 LHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE---------TKSPVTSAEVSQDGR-YITTADGSTVKFWDANHFGLVKS 223 (349)
Q Consensus 154 ~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---------~~~~v~~~~~~~~~~-~l~~~~d~~i~iwd~~~~~~~~~ 223 (349)
.+.+..++ |+.++.|..||..+++...... ....|.++...+++. +.++..++.|..||..+.+....
T Consensus 365 d~~g~lWi--Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 365 DKDKNLWI--GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENF 442 (795)
T ss_dssp CTTSCEEE--EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCCCEEE--EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEe
Confidence 55444333 4555789999988776543221 124578888888898 77777777899999887654432
Q ss_pred Ec----C-CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEec------CCCcceeEEEEccCCCeEEEecCCC
Q 018860 224 YN----M-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK------GHHGPVHCVRFSPGGESYASGSEDG 292 (349)
Q Consensus 224 ~~----~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~------~h~~~i~~l~~sp~~~~l~sgs~Dg 292 (349)
.. . ...+.++...+ +++..+ |+. +-+.+||..+++...... -....|.++...+++.+.+... +|
T Consensus 443 ~~~~~~l~~~~v~~i~~d~-~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G 518 (795)
T 4a2l_A 443 NQRNSQLVNENVYAILPDG-EGNLWL-GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG 518 (795)
T ss_dssp CTTTSCCSCSCEEEEEECS-SSCEEE-EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC
T ss_pred ecCCCCcCCCeeEEEEECC-CCCEEE-Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-Cc
Confidence 21 1 12345555544 345444 444 458889987765433221 1236789999998888665444 44
Q ss_pred CEEEecC
Q 018860 293 TIRIWQT 299 (349)
Q Consensus 293 ~v~vW~~ 299 (349)
|..|+.
T Consensus 519 -l~~~~~ 524 (795)
T 4a2l_A 519 -LSVFKQ 524 (795)
T ss_dssp -EEEEEE
T ss_pred -eEEEeC
Confidence 666664
No 253
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.73 E-value=2.2e-06 Score=71.67 Aligned_cols=178 Identities=10% Similarity=0.012 Sum_probs=122.0
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCe--EEEEECCCCCeeEEeeCCCeEEEEECCCCC
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAV--WSCCLDTNALRAASASADFSAKVWDALTGD 94 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~ 94 (349)
.....+.|+ ++.+..+.+.++.++++|.++++.++.+ -.. .. ..+++..+ +..+....++.+.++|..+++
T Consensus 55 ~ftqGL~~~----~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 55 AFTQGLVFH----QGHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp CCEEEEEEE----TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECSS-CEEEEESSSCEEEEEETTTTE
T ss_pred cccceEEEE----CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeCC-EEEEEEccCCEEEEEECCcCc
Confidence 344688887 4677888888899999999999988777 322 23 33555544 333445578999999999999
Q ss_pred EEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCce-eccCC---CCeEEEEEecCCCeEEEEeeCCCeE
Q 018860 95 VLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPRE-VDRSP---GSVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 95 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~-~~~~~---~~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
.+.++.....- ..+++++..|+.+..+..|.++|..+.+..... +.... ..++.+.|. ++.+.+....++.|
T Consensus 128 ~~~ti~~~~eG--wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I 203 (268)
T 3nok_A 128 RERTTRYSGEG--WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDV 203 (268)
T ss_dssp EEEEEECSSCC--CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEE
T ss_pred EEEEEeCCCce--eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeE
Confidence 99998755432 333467777777767889999998764432111 11111 234567776 55777777777899
Q ss_pred EEEECCCCceEEeecCC--------------CCeeEEEEcCCCc-EEEEe
Q 018860 171 RLWDVRSGEIVQTLETK--------------SPVTSAEVSQDGR-YITTA 205 (349)
Q Consensus 171 ~vwd~~~~~~~~~~~~~--------------~~v~~~~~~~~~~-~l~~~ 205 (349)
.+.|+++++.+..+... ...+.+++.|+++ +++++
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 99999999998776431 2457888988654 44444
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.70 E-value=6.1e-06 Score=78.03 Aligned_cols=264 Identities=15% Similarity=0.099 Sum_probs=154.0
Q ss_pred EEEEEec-CCCeEEEeC-CCCCeEEEeecccCC----------e-EEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEe
Q 018860 33 FLISASK-DSSPMLRNG-ETGDWIGTFEGHKGA----------V-WSCCLDTNALRAASASADFSAKVWDALTGDVLHSF 99 (349)
Q Consensus 33 ~l~s~s~-d~~i~iw~~-~~~~~~~~~~~h~~~----------v-~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~ 99 (349)
.|..++. ++.+.-+|. .+++.+..++..... + ..+++ .+..++.++.|+.+..+|..+|+.+-.+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 5666677 888999999 899887766532210 0 11222 2446778888999999999999987665
Q ss_pred ccCC-----eEEEEEEcCCCCEEEEEeC------CCeEEEEECCCCCCCCceeccC------------------------
Q 018860 100 EHKH-----IVRACSFSEDTHLLLTGGM------EKILRIFDLNRPDAPPREVDRS------------------------ 144 (349)
Q Consensus 100 ~~~~-----~v~~~~~s~~~~~l~s~~~------d~~i~lwd~~~~~~~~~~~~~~------------------------ 144 (349)
.... .+.+--.-.++ .++.++. ++.|..+|..+.+...+.....
T Consensus 142 ~~~~~~~~~~~~~~P~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g 220 (571)
T 2ad6_A 142 EVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLG 220 (571)
T ss_dssp ECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHH
T ss_pred cCCCCCccceeccCCEEECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccc
Confidence 4221 12110000134 4555543 7899999987654321110000
Q ss_pred ------------CCCe-EEEEEecCCCeEEEEeeC-----------C----CeEEEEECCCCceEEeecCC---------
Q 018860 145 ------------PGSV-RTVAWLHSDQTILSTCTD-----------M----GGVRLWDVRSGEIVQTLETK--------- 187 (349)
Q Consensus 145 ------------~~~i-~~~~~~~~~~~~l~~~~~-----------d----g~v~vwd~~~~~~~~~~~~~--------- 187 (349)
.+.+ ..+++.+..+.++...++ + +.|.-+|.++|+.+-.++..
T Consensus 221 ~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~ 300 (571)
T 2ad6_A 221 TKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAG 300 (571)
T ss_dssp HHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCC
T ss_pred cccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccccccc
Confidence 0000 123445555665554331 1 36999999999887555321
Q ss_pred --CCeeEEEEcCCCc---EE-EEecCCeEEEEecCCceeeEEEcCCCc-------------e------------------
Q 018860 188 --SPVTSAEVSQDGR---YI-TTADGSTVKFWDANHFGLVKSYNMPCT-------------I------------------ 230 (349)
Q Consensus 188 --~~v~~~~~~~~~~---~l-~~~~d~~i~iwd~~~~~~~~~~~~~~~-------------~------------------ 230 (349)
.++ .+....+|+ ++ .+..++.+.++|..+++.+..+..... .
T Consensus 301 ~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~ 379 (571)
T 2ad6_A 301 VNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNIC 379 (571)
T ss_dssp CCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEES
T ss_pred CCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEEC
Confidence 122 122234674 34 345588999999998887765543220 0
Q ss_pred ---------EEeeecCCCCCEEEEec-------------------------------------CCCeEEEEeCCCCcEEE
Q 018860 231 ---------ESASLEPKYGNKFVAGG-------------------------------------EDMWVRFFDFHTGNEIA 264 (349)
Q Consensus 231 ---------~~~~~~~~~~~~~~~~~-------------------------------------~d~~i~v~d~~~~~~~~ 264 (349)
..++++|. ...++... .++.|..||..+++.+-
T Consensus 380 P~~~Gg~~w~~~a~dp~-~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W 458 (571)
T 2ad6_A 380 PSAMGFHNQGVDSYDPE-SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKW 458 (571)
T ss_dssp SCTTCSSCSCBCEEETT-TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEE
T ss_pred CCCccccCCCCceECCC-CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEE
Confidence 12345554 23443321 35799999999998765
Q ss_pred EecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 265 CNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 265 ~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
.... ..++.+..+...+..++.++.||.|+.||....
T Consensus 459 ~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 459 TKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp EEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred EecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 4432 223333334445667778999999999997654
No 255
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.68 E-value=1.4e-05 Score=75.69 Aligned_cols=250 Identities=14% Similarity=0.069 Sum_probs=144.9
Q ss_pred EEEEecCCCeEEEeCCCCCeEEEeeccc--C--CeEE-EEECCCCCeeEEee-----CCCeEEEEECCCCCEEEEeccCC
Q 018860 34 LISASKDSSPMLRNGETGDWIGTFEGHK--G--AVWS-CCLDTNALRAASAS-----ADFSAKVWDALTGDVLHSFEHKH 103 (349)
Q Consensus 34 l~s~s~d~~i~iw~~~~~~~~~~~~~h~--~--~v~~-~~~~~~~~~l~s~s-----~D~~i~vWd~~~~~~~~~~~~~~ 103 (349)
|+.++.|+.+.-+|..+|+.+...+... . .+.+ -.+ .++..++.++ .++.|+.+|..+|+.+-.+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 7778889999999999999876654321 0 1111 111 1444444332 48999999999999876664321
Q ss_pred eE---------------------------------------EEEEEcCCCCEEEEEeCC----------------CeEEE
Q 018860 104 IV---------------------------------------RACSFSEDTHLLLTGGME----------------KILRI 128 (349)
Q Consensus 104 ~v---------------------------------------~~~~~s~~~~~l~s~~~d----------------~~i~l 128 (349)
.. ...++.+...+++.+..+ ..|..
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 11 123455666677766654 37888
Q ss_pred EECCCCCCCCceecc--C--------CCCeEEEEEecCCC---eEEEEeeCCCeEEEEECCCCceEEeecCCC-------
Q 018860 129 FDLNRPDAPPREVDR--S--------PGSVRTVAWLHSDQ---TILSTCTDMGGVRLWDVRSGEIVQTLETKS------- 188 (349)
Q Consensus 129 wd~~~~~~~~~~~~~--~--------~~~i~~~~~~~~~~---~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~------- 188 (349)
+|..+.+... .++. | ..++. +.....++ .+++.++.+|.+.+.|.++|+.+-......
T Consensus 283 ld~~TG~~~W-~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 283 RDADTGEAKF-GYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EETTTCCEEE-EEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EeCCCCceee-EeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 8887654321 1111 1 11121 22110233 566677788999999999998875443210
Q ss_pred -------Ce--------------------------eEEEEcCCCcEEEE-------------------------------
Q 018860 189 -------PV--------------------------TSAEVSQDGRYITT------------------------------- 204 (349)
Q Consensus 189 -------~v--------------------------~~~~~~~~~~~l~~------------------------------- 204 (349)
++ ..++++|+..++..
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 11 12344554433321
Q ss_pred ---e------cCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcc-ee
Q 018860 205 ---A------DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGP-VH 274 (349)
Q Consensus 205 ---~------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~-i~ 274 (349)
+ ..+.|.-||+.+++.+-..........-.+. ..+..++.++.|+.++.||..+|+++-..+-..+. ..
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~-tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~ 519 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMA-TAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGY 519 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEE-ETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceE-ecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEec
Confidence 1 2367888999988877665433221111111 13667788999999999999999998665432211 12
Q ss_pred EEEEccCCC-eEEE
Q 018860 275 CVRFSPGGE-SYAS 287 (349)
Q Consensus 275 ~l~~sp~~~-~l~s 287 (349)
-+.+..+|+ |+++
T Consensus 520 P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 520 PMTYTHKGTQYVAI 533 (599)
T ss_dssp CEEEEETTEEEEEE
T ss_pred cEEEEeCCEEEEEE
Confidence 245556775 4443
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.68 E-value=1.1e-05 Score=66.74 Aligned_cols=180 Identities=14% Similarity=0.114 Sum_probs=120.2
Q ss_pred CceeeEEEeecCCCccEEEEEecCC--CeEEEeCCCCCeEEEeecccCCe-EEEEECCCCCeeEEeeCCCeEEEEECCCC
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDS--SPMLRNGETGDWIGTFEGHKGAV-WSCCLDTNALRAASASADFSAKVWDALTG 93 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~--~i~iw~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~s~D~~i~vWd~~~~ 93 (349)
.....+.|++ +.+..|.+.+| .++.+|.++++.++.+....... ..+++.. ++..+....++.+.++|..+.
T Consensus 21 ~ftqGL~~~~----~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 21 AFTEGLFYLR----GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp CCEEEEEEET----TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTT
T ss_pred cccccEEEEC----CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcC
Confidence 4466888983 66667777654 89999999999998887543321 2344443 333444567899999999999
Q ss_pred CEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCce-eccCC---CCeEEEEEecCCCeEEEEeeCCCe
Q 018860 94 DVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPRE-VDRSP---GSVRTVAWLHSDQTILSTCTDMGG 169 (349)
Q Consensus 94 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~-~~~~~---~~i~~~~~~~~~~~~l~~~~~dg~ 169 (349)
+.+.++..+.. ...+.+++..|+.+..+..|.++|..+.+..... +..+. ..++.+.|. ++.+.+....+..
T Consensus 96 ~~~~ti~~~~~--Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw~s~~ 171 (243)
T 3mbr_X 96 TPRARFRYPGE--GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVWLTSR 171 (243)
T ss_dssp EEEEEEECSSC--CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTTTE
T ss_pred cEEEEEeCCCC--ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEECCCCe
Confidence 99999886543 2334456766666666888999998764432111 11111 234566665 5667777766789
Q ss_pred EEEEECCCCceEEeecCC--------------CCeeEEEEcCCCcEE-EEe
Q 018860 170 VRLWDVRSGEIVQTLETK--------------SPVTSAEVSQDGRYI-TTA 205 (349)
Q Consensus 170 v~vwd~~~~~~~~~~~~~--------------~~v~~~~~~~~~~~l-~~~ 205 (349)
|.+.|+++|+.+..+... ...+.+++.|+++.| +++
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 999999999998776521 235788888876544 444
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.67 E-value=2.9e-05 Score=73.51 Aligned_cols=255 Identities=16% Similarity=0.095 Sum_probs=147.2
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeecccC----CeE-EEEECC---CCC-eeEEee------CCCeEEEEECCCCCE
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEGHKG----AVW-SCCLDT---NAL-RAASAS------ADFSAKVWDALTGDV 95 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~----~v~-~~~~~~---~~~-~l~s~s------~D~~i~vWd~~~~~~ 95 (349)
+..|+.++.|+.+.-+|.++|+.+..++.... .+. +-.+.. +++ .++.++ .++.|.-+|..+|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 34677788999999999999998776653220 111 111111 232 455544 389999999999987
Q ss_pred EEEeccCC-eE-----------------------------------------EEEEEcCCCCEEEEEeC-----------
Q 018860 96 LHSFEHKH-IV-----------------------------------------RACSFSEDTHLLLTGGM----------- 122 (349)
Q Consensus 96 ~~~~~~~~-~v-----------------------------------------~~~~~s~~~~~l~s~~~----------- 122 (349)
+-...... .+ ...++.|+..+++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 76543211 00 12345566666765552
Q ss_pred ---------C----CeEEEEECCCCCCCCce-eccC--------CCCeEEEEEe-cCCC--eEEEEeeCCCeEEEEECCC
Q 018860 123 ---------E----KILRIFDLNRPDAPPRE-VDRS--------PGSVRTVAWL-HSDQ--TILSTCTDMGGVRLWDVRS 177 (349)
Q Consensus 123 ---------d----~~i~lwd~~~~~~~~~~-~~~~--------~~~i~~~~~~-~~~~--~~l~~~~~dg~v~vwd~~~ 177 (349)
| +.|..+|..+.+..... ...| ..++. +... .++. .+++.++.+|.++++|.++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 57888888765532221 1111 11221 1211 1222 3666778889999999999
Q ss_pred CceEEeecCCC--------------Ce--------------------------------eEEEEcCCCcEEEE-e-----
Q 018860 178 GEIVQTLETKS--------------PV--------------------------------TSAEVSQDGRYITT-A----- 205 (349)
Q Consensus 178 ~~~~~~~~~~~--------------~v--------------------------------~~~~~~~~~~~l~~-~----- 205 (349)
|+.+-...... ++ ..++++|+..++.. .
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 98875543221 00 12344554333221 1
Q ss_pred ----------------------------cCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeC
Q 018860 206 ----------------------------DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDF 257 (349)
Q Consensus 206 ----------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~ 257 (349)
.++.|.-||+.+++.+-............+.. .+..++.++.|+.++.||.
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT-AGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEE-TTTEEEEECTTSEEEEEET
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEe-CCCEEEEECCCCcEEEEEC
Confidence 14779999999988776554432221111111 2667888999999999999
Q ss_pred CCCcEEEEecCCCcce-eEEEEccCCC-eEEE
Q 018860 258 HTGNEIACNKGHHGPV-HCVRFSPGGE-SYAS 287 (349)
Q Consensus 258 ~~~~~~~~~~~h~~~i-~~l~~sp~~~-~l~s 287 (349)
++|+.+-.++...+.+ .-+.|..+|+ |+++
T Consensus 515 ~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 515 KSGKELWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CCCCEEEEecCCCCcccCceEEEECCEEEEEE
Confidence 9999987665432221 2256667776 4443
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.66 E-value=3.4e-05 Score=67.24 Aligned_cols=234 Identities=9% Similarity=0.045 Sum_probs=139.8
Q ss_pred eccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeec--------------------ccCCeEEEEECC
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEG--------------------HKGAVWSCCLDT 71 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~--------------------h~~~v~~~~~~~ 71 (349)
+.|.-....++++++ +|+++.++..++.|..|+..++... .+.. .......+++++
T Consensus 14 ~~g~~~~p~~i~~d~---~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~ 89 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDS---TNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL 89 (322)
T ss_dssp EECSSSCCCCEECCT---TCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET
T ss_pred cCCccCCceEEEEcC---CCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcC
Confidence 444434456788875 7887778888899999987765443 2321 113468899997
Q ss_pred -CCCeeEEeeCCCeEEEEECCCCCEEEEec-----cCCeEEEEEEcC-CCCEEEEEeC-----------------CCeEE
Q 018860 72 -NALRAASASADFSAKVWDALTGDVLHSFE-----HKHIVRACSFSE-DTHLLLTGGM-----------------EKILR 127 (349)
Q Consensus 72 -~~~~l~s~s~D~~i~vWd~~~~~~~~~~~-----~~~~v~~~~~s~-~~~~l~s~~~-----------------d~~i~ 127 (349)
++. |..+...+.|..+|..+++...... .......+++.+ +|++.++-.. ++.+.
T Consensus 90 ~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 90 QNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp TTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred CCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEE
Confidence 665 5555445558888877553222111 113467899999 9987776432 35677
Q ss_pred EEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCC---c--eEEeecCCCCeeEEEEcCCCcEE
Q 018860 128 IFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSG---E--IVQTLETKSPVTSAEVSQDGRYI 202 (349)
Q Consensus 128 lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~---~--~~~~~~~~~~v~~~~~~~~~~~l 202 (349)
.||...... ..+.........+++.+++..++++-...+.|.+|++... . ....+ .. ...+++.++|++.
T Consensus 169 ~~d~~~~~~--~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~--~g-P~gi~~d~~G~l~ 243 (322)
T 2fp8_A 169 KYDPSTKET--TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI--PN-PGNIKRNADGHFW 243 (322)
T ss_dssp EEETTTTEE--EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC--SS-EEEEEECTTSCEE
T ss_pred EEeCCCCEE--EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC--CC-CCCeEECCCCCEE
Confidence 777643221 1111111223467787766666666555689999998742 2 11221 22 5678899999876
Q ss_pred EEec-----------CCeEEEEecCCceeeEEEcCCC-----ceEEeeecCCCCCEEEEecCCCeEEEEeCC
Q 018860 203 TTAD-----------GSTVKFWDANHFGLVKSYNMPC-----TIESASLEPKYGNKFVAGGEDMWVRFFDFH 258 (349)
Q Consensus 203 ~~~~-----------d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 258 (349)
++.. .+.|..+|.. ++.+..+..+. .+..+++ ..++.+++...++.|.++++.
T Consensus 244 va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 244 VSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC-
T ss_pred EEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE--eCCEEEEeecCCCceEEEecc
Confidence 6643 3567888874 55555554432 2333333 235566666678888888875
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=0.00046 Score=67.80 Aligned_cols=272 Identities=10% Similarity=0.006 Sum_probs=161.9
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEee--------------cccCCeEEEEECCCCCeeEEeeCC
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE--------------GHKGAVWSCCLDTNALRAASASAD 82 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~--------------~h~~~v~~~~~~~~~~~l~s~s~D 82 (349)
..|.++...+ +|. |..|+..+-+.+++..+..+..... .....|.++..++++. |..|..+
T Consensus 258 ~~i~~i~~d~---~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~ 332 (781)
T 3v9f_A 258 SYIFSIKQLK---DNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWG 332 (781)
T ss_dssp CCEEEEEECT---TSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBS
T ss_pred ceEEEEEECC---CCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecC
Confidence 4577776653 555 5557665567778876654322111 2345799999999886 6667767
Q ss_pred CeEEEEECCCCCEEEEec----------cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCce--eccCCCCeEE
Q 018860 83 FSAKVWDALTGDVLHSFE----------HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPRE--VDRSPGSVRT 150 (349)
Q Consensus 83 ~~i~vWd~~~~~~~~~~~----------~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~--~~~~~~~i~~ 150 (349)
+-|..++..++....... ....|.++...++|++- .|+.++-+..|+..+....... .......|.+
T Consensus 333 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~ 411 (781)
T 3v9f_A 333 GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLC 411 (781)
T ss_dssp SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEE
T ss_pred CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEE
Confidence 778899877654333211 23468999988888755 4565555788886532110000 0112346777
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECCCCceEEeec---CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcCC
Q 018860 151 VAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE---TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMP 227 (349)
Q Consensus 151 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~ 227 (349)
+...+.+. +.+ ++..+.+..+|.++++...... ....+.++...+++.+.++.. +.|..||..+..........
T Consensus 412 i~~d~~g~-lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 412 SLKDSEGN-LWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp EEECTTSC-EEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTT
T ss_pred EEECCCCC-EEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCc
Confidence 77654444 443 3344679999988776543221 234688888888888877766 56888998765544332221
Q ss_pred ------CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecC---CCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 228 ------CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG---HHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 228 ------~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~---h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
..+..+...+ ++. +..|+.++-+..||..+++....... ....|.++...++|.+.++.. +|.|..|+
T Consensus 489 ~~~~~~~~i~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDS-EGR-FWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp TSSCSCSCEEEEEECT-TCC-EEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred ccccccceeEEEEEcC-CCC-EEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 2345555554 244 45555544577888776544322111 245789999988887665444 67657777
Q ss_pred CC
Q 018860 299 TG 300 (349)
Q Consensus 299 ~~ 300 (349)
..
T Consensus 566 ~~ 567 (781)
T 3v9f_A 566 AR 567 (781)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.55 E-value=2.4e-05 Score=75.38 Aligned_cols=233 Identities=13% Similarity=0.136 Sum_probs=127.6
Q ss_pred EEEECC-CCCeeEEeeCCC-----------eEEEEECCCCCEE--EEec--cCCeEEEEEEcCCCCEEEEEe-CCCeEEE
Q 018860 66 SCCLDT-NALRAASASADF-----------SAKVWDALTGDVL--HSFE--HKHIVRACSFSEDTHLLLTGG-MEKILRI 128 (349)
Q Consensus 66 ~~~~~~-~~~~l~s~s~D~-----------~i~vWd~~~~~~~--~~~~--~~~~v~~~~~s~~~~~l~s~~-~d~~i~l 128 (349)
++++.+ +++.++.||.+. .+.+||..+++-. ..+. +.....++++.+++++++.|| .+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 888888887643 6889998877522 2221 222334567788999999998 4567999
Q ss_pred EECCCCCCCC-ceeccCCCCeEEEEEecCCCeEEEEee-CC-----CeEEEEECCCCceEEee-----cCCCCeeEEEEc
Q 018860 129 FDLNRPDAPP-REVDRSPGSVRTVAWLHSDQTILSTCT-DM-----GGVRLWDVRSGEIVQTL-----ETKSPVTSAEVS 196 (349)
Q Consensus 129 wd~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~-~d-----g~v~vwd~~~~~~~~~~-----~~~~~v~~~~~~ 196 (349)
||+.+..... ..+.. +-.-.++...+++ .+++.|+ .+ ..+.+||+.+++....- .....-....+.
T Consensus 270 yd~~t~~W~~~~~~~~-~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQV-ARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEGGGTEEEECCCCSS-CCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred ecCcCCceeECCCCCc-cccccceEEecCC-eEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 9986543210 01111 1111233344444 4554554 33 47999999988765431 100000001111
Q ss_pred CCCc-EEEEe---------cCCeEEEEecCCceeeEEEcCC----------CceEEeeecCCCCCEEEEecCCC------
Q 018860 197 QDGR-YITTA---------DGSTVKFWDANHFGLVKSYNMP----------CTIESASLEPKYGNKFVAGGEDM------ 250 (349)
Q Consensus 197 ~~~~-~l~~~---------~d~~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~d~------ 250 (349)
.+++ ++.++ ....+..||..+.......... ..-.++.+...+++.++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 2232 23332 2346788888765433221111 01123333333567778887532
Q ss_pred -----eEEEEeCCCCcEEEEe--cCCCcce-eEEEEccCCCeEEEecCC-----------CCEEEecCC
Q 018860 251 -----WVRFFDFHTGNEIACN--KGHHGPV-HCVRFSPGGESYASGSED-----------GTIRIWQTG 300 (349)
Q Consensus 251 -----~i~v~d~~~~~~~~~~--~~h~~~i-~~l~~sp~~~~l~sgs~D-----------g~v~vW~~~ 300 (349)
.+.+||..+....... ....... .+++..|+++.++.|+.+ ..+.+||+.
T Consensus 428 ~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~ 496 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPE 496 (656)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGG
T ss_pred CCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCC
Confidence 6888888776654432 2223332 345677899999999865 457888863
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.51 E-value=0.0001 Score=69.84 Aligned_cols=266 Identities=14% Similarity=0.104 Sum_probs=152.8
Q ss_pred cEEEEEec-CCCeEEEeC-CCCCeEEEeecccCC-----------eEEEEECCCCCe----eEEeeCCCeEEEEECCCCC
Q 018860 32 FFLISASK-DSSPMLRNG-ETGDWIGTFEGHKGA-----------VWSCCLDTNALR----AASASADFSAKVWDALTGD 94 (349)
Q Consensus 32 ~~l~s~s~-d~~i~iw~~-~~~~~~~~~~~h~~~-----------v~~~~~~~~~~~----l~s~s~D~~i~vWd~~~~~ 94 (349)
..|..++. ++.+.-+|. ++++.+..++..... ...+++++.+.. |+.++.|+.+.-+|..+|+
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 35666777 888888999 899988777543210 122345333333 7888899999999999999
Q ss_pred EEEEeccCC-----eEEE-EEEcCCCCEEEEEe------CCCeEEEEECCCCCCCCceeccC------------------
Q 018860 95 VLHSFEHKH-----IVRA-CSFSEDTHLLLTGG------MEKILRIFDLNRPDAPPREVDRS------------------ 144 (349)
Q Consensus 95 ~~~~~~~~~-----~v~~-~~~s~~~~~l~s~~------~d~~i~lwd~~~~~~~~~~~~~~------------------ 144 (349)
.+-...... .+.+ -.+ .++ .++.++ .++.|+.+|..+.+...+.....
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 220 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 220 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred EEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence 876554221 1211 011 134 455544 37899999987655321110000
Q ss_pred ------------------CCCe-EEEEEecCCCeEEEEeeC---------------CCeEEEEECCCCceEEeecCC---
Q 018860 145 ------------------PGSV-RTVAWLHSDQTILSTCTD---------------MGGVRLWDVRSGEIVQTLETK--- 187 (349)
Q Consensus 145 ------------------~~~i-~~~~~~~~~~~~l~~~~~---------------dg~v~vwd~~~~~~~~~~~~~--- 187 (349)
...+ ...++.+..+.+++..++ .+.|.-+|.++|+.+-.++..
T Consensus 221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 0000 123444556666554443 148999999999887555431
Q ss_pred --------CCeeEEEEc-CCC---cEEE-EecCCeEEEEecCCceeeEEEcCCC-------------c------------
Q 018860 188 --------SPVTSAEVS-QDG---RYIT-TADGSTVKFWDANHFGLVKSYNMPC-------------T------------ 229 (349)
Q Consensus 188 --------~~v~~~~~~-~~~---~~l~-~~~d~~i~iwd~~~~~~~~~~~~~~-------------~------------ 229 (349)
.++ .+... .+| ..++ ...++.+.++|..+++++....... .
T Consensus 301 ~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~ 379 (599)
T 1w6s_A 301 EWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMD 379 (599)
T ss_dssp SSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTT
T ss_pred cccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCC
Confidence 122 12222 456 3444 4568999999999888776554321 0
Q ss_pred ---------------eEEeeecCCCCCEEEEe---------------------------------c------CCCeEEEE
Q 018860 230 ---------------IESASLEPKYGNKFVAG---------------------------------G------EDMWVRFF 255 (349)
Q Consensus 230 ---------------~~~~~~~~~~~~~~~~~---------------------------------~------~d~~i~v~ 255 (349)
...++++|. ...+++. + .++.|..|
T Consensus 380 ~~~~~~~P~~~Gg~~w~~~a~dp~-~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 380 HLAKDICPSAMGYHNQGHDSYDPK-RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp CCEEEESSCTTCSSCSCBCEEETT-TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCccEeccCcccccCCCCccCCCC-CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 012334443 2222211 1 45789999
Q ss_pred eCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 256 DFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 256 d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
|+.+++.+=... +..+...-.+...+..++.|+.||.|+.||...+
T Consensus 459 D~~tG~~~W~~~-~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG 504 (599)
T 1w6s_A 459 NAITGDYKWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTG 504 (599)
T ss_dssp CTTTCCEEEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ECCCCCEEeEec-CCCCccCcceEecCCEEEEECCCCeEEEEECCCC
Confidence 999998764332 1122222223345667778999999999997654
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.51 E-value=6.5e-06 Score=79.32 Aligned_cols=257 Identities=10% Similarity=0.063 Sum_probs=140.2
Q ss_pred CccEEEEEecCC-----------CeEEEeCCCCCeEE--Eeec-ccCCeEEEEECCCCCeeEEee-CCCeEEEEECCCCC
Q 018860 30 DGFFLISASKDS-----------SPMLRNGETGDWIG--TFEG-HKGAVWSCCLDTNALRAASAS-ADFSAKVWDALTGD 94 (349)
Q Consensus 30 ~~~~l~s~s~d~-----------~i~iw~~~~~~~~~--~~~~-h~~~v~~~~~~~~~~~l~s~s-~D~~i~vWd~~~~~ 94 (349)
+|+.++.|+.+. .+.+||..++++.. .+.. +.....++++..+++.++.|| .+..+.+||..+.+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 678888887653 46789988887643 2222 333344567888999999988 45689999987764
Q ss_pred EEEEe--ccCCeEEEEEEcCCCCEEEEEe-CC-----CeEEEEECCCCCCCCc------eeccCCCCeEEEEEecCCCeE
Q 018860 95 VLHSF--EHKHIVRACSFSEDTHLLLTGG-ME-----KILRIFDLNRPDAPPR------EVDRSPGSVRTVAWLHSDQTI 160 (349)
Q Consensus 95 ~~~~~--~~~~~v~~~~~s~~~~~l~s~~-~d-----~~i~lwd~~~~~~~~~------~~~~~~~~i~~~~~~~~~~~~ 160 (349)
-...- ..+..-.+++..+++++++.|| .+ ..+.+||+.+...... .+...... ..+...+..+
T Consensus 277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~---~~~~~~~~iy 353 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ---GLYRSDNHAW 353 (656)
T ss_dssp EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT---GGGTTTCSCC
T ss_pred eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc---ceeecCCceE
Confidence 32221 1122223455667899999988 44 5688999865432110 00000000 0001111112
Q ss_pred EEEee--------CCCeEEEEECCCCceEEeecCC----------CCeeEEEEc-CCCcEEEEec-CC-----------e
Q 018860 161 LSTCT--------DMGGVRLWDVRSGEIVQTLETK----------SPVTSAEVS-QDGRYITTAD-GS-----------T 209 (349)
Q Consensus 161 l~~~~--------~dg~v~vwd~~~~~~~~~~~~~----------~~v~~~~~~-~~~~~l~~~~-d~-----------~ 209 (349)
+..+. ....+..||+.+.......... ..-.++.+. .++++++.+. +. .
T Consensus 354 v~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~ 433 (656)
T 1k3i_A 354 LFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHI 433 (656)
T ss_dssp EEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEE
T ss_pred EEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceE
Confidence 22211 1256889999887654332211 012333333 3566655432 21 6
Q ss_pred EEEEecCCceeeEEE--cCCCc--eEEeeecCCCCCEEEEecCC-----------CeEEEEeCCCCcEEEEe--cCCCcc
Q 018860 210 VKFWDANHFGLVKSY--NMPCT--IESASLEPKYGNKFVAGGED-----------MWVRFFDFHTGNEIACN--KGHHGP 272 (349)
Q Consensus 210 i~iwd~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~d-----------~~i~v~d~~~~~~~~~~--~~h~~~ 272 (349)
+.+||..+..-.... .++.. ...+...+ +++.++.||.+ ..+.+||..+.+-...- ...-..
T Consensus 434 v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~-~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~ 512 (656)
T 1k3i_A 434 ITLGEPGTSPNTVFASNGLYFARTFHTSVVLP-DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVY 512 (656)
T ss_dssp EECCSTTSCCEEEECTTCCSSCCBSCEEEECT-TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCT
T ss_pred EEcCCCCCCCeeEEccCCCCCCcccCCeEECC-CCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCcccc
Confidence 778888765544332 22222 12333444 47888888854 56899998776543211 111111
Q ss_pred eeEEEEccCCCeEEEecC
Q 018860 273 VHCVRFSPGGESYASGSE 290 (349)
Q Consensus 273 i~~l~~sp~~~~l~sgs~ 290 (349)
-.+..+.|+++.++.|+.
T Consensus 513 hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 513 HSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TEEEEECTTSCEEEEECC
T ss_pred ccHhhcCCCcEEEecCCC
Confidence 123456789999999985
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=0.00083 Score=65.96 Aligned_cols=271 Identities=12% Similarity=0.064 Sum_probs=157.4
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEee-------cccCCeEEEEECCCCCeeEEeeCCCeEEEEE
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE-------GHKGAVWSCCLDTNALRAASASADFSAKVWD 89 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd 89 (349)
..|.++...+ +|.+.+ |+.. -+.+|+..++++..-.. .....|.++..++++. |..|...+-|.+++
T Consensus 211 ~~i~~i~~d~---~g~lwi-gt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~ 284 (781)
T 3v9f_A 211 NDVRCIYKDT---NGNIWI-GTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILD 284 (781)
T ss_dssp SSEEEEEECT---TCCEEE-EETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEE
T ss_pred CceeEEEEcC---CCCEEE-EeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEEC
Confidence 4577776553 565554 5555 57788877665432211 1245699999988886 44555545578889
Q ss_pred CCCCCEEEEec---------------cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCce--------eccCCC
Q 018860 90 ALTGDVLHSFE---------------HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPRE--------VDRSPG 146 (349)
Q Consensus 90 ~~~~~~~~~~~---------------~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~--------~~~~~~ 146 (349)
..+++...... ....|.++...++|++- .|+.++-|..++.......... ......
T Consensus 285 ~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 363 (781)
T 3v9f_A 285 LQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIW-IGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNK 363 (781)
T ss_dssp TTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEE-EEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSS
T ss_pred CCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCcceeeccCccccccCCCCCc
Confidence 87765432211 23468999998888754 4665666888886543211000 001224
Q ss_pred CeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeec----CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeE
Q 018860 147 SVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE----TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVK 222 (349)
Q Consensus 147 ~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~ 222 (349)
.|.++...+.+..++ |+.++.|..||..++....... ....|.++...+++.+.++..++.+..+|..+.+...
T Consensus 364 ~v~~i~~d~~g~lWi--gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~ 441 (781)
T 3v9f_A 364 VVSSVCDDGQGKLWI--GTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQI 441 (781)
T ss_dssp CEEEEEECTTSCEEE--EEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEE
T ss_pred ceEEEEEcCCCCEEE--EeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEE
Confidence 577777654444333 3434679999987654332111 1245788888888888888777778899987665433
Q ss_pred EEc--C-CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCC-----CcceeEEEEccCCCeEEEecCCCCE
Q 018860 223 SYN--M-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH-----HGPVHCVRFSPGGESYASGSEDGTI 294 (349)
Q Consensus 223 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h-----~~~i~~l~~sp~~~~l~sgs~Dg~v 294 (349)
... . ...+.++...+ ...+..|+. +-|.+||..+++........ ...|.++...++|.+.+....+| |
T Consensus 442 ~~~~~~~~~~v~~i~~d~--~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l 517 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDK--NKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-V 517 (781)
T ss_dssp CCSTTTCCCCEEEEEECT--TSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-E
T ss_pred eccCCCCCCeEEEEEECC--CCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-E
Confidence 211 1 12345555443 345555655 56889998776543322211 46789999988887655433344 6
Q ss_pred EEecCC
Q 018860 295 RIWQTG 300 (349)
Q Consensus 295 ~vW~~~ 300 (349)
..|+..
T Consensus 518 ~~~~~~ 523 (781)
T 3v9f_A 518 GIYTPD 523 (781)
T ss_dssp EEECTT
T ss_pred EEEeCC
Confidence 666653
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.50 E-value=4.2e-05 Score=74.85 Aligned_cols=241 Identities=10% Similarity=-0.014 Sum_probs=130.8
Q ss_pred cCCC-ceeeEEEe-ecCCCccEEEEEec-CC----CeEEEeCCCC-CeEE-EeecccCCeEEEEECCCCCeeEEeeCC--
Q 018860 14 GHSR-PVVDLFYS-PITPDGFFLISASK-DS----SPMLRNGETG-DWIG-TFEGHKGAVWSCCLDTNALRAASASAD-- 82 (349)
Q Consensus 14 gh~~-~v~~~~fs-~~~~~~~~l~s~s~-d~----~i~iw~~~~~-~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D-- 82 (349)
+|.- .+....|| | ||++||-+.. +| +|.+++..++ +.+. .+... ...++|++|++.|+-...|
T Consensus 170 ~~~~~~~~~~~~S~P---DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~---~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPP---EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGT---NGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp TCSCCEEEEEEECTT---TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEE---CSCCEECSSTTEEEEEEECTT
T ss_pred CCCeEEEeeeEecCC---CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCc---eeeEEEecCCCEEEEEEECCC
Confidence 4543 55667777 6 9998874433 33 4888999888 6321 12221 2357899999888877665
Q ss_pred ---CeEEEEECCCCCE--EEEe--ccCCeEEEEEEcCCCCEEEEEe---CCCeEEEEECCCCCCCC--cee-ccCCCCeE
Q 018860 83 ---FSAKVWDALTGDV--LHSF--EHKHIVRACSFSEDTHLLLTGG---MEKILRIFDLNRPDAPP--REV-DRSPGSVR 149 (349)
Q Consensus 83 ---~~i~vWd~~~~~~--~~~~--~~~~~v~~~~~s~~~~~l~s~~---~d~~i~lwd~~~~~~~~--~~~-~~~~~~i~ 149 (349)
..|.++++.+++. ...+ ........+.|+|||++|+..+ ....|.++|+..+.... +.+ ........
T Consensus 244 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~ 323 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRY 323 (751)
T ss_dssp CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCE
T ss_pred CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceE
Confidence 3688888877642 2232 2334566789999999887654 23457778887543222 222 22334445
Q ss_pred EEEEecCCCeEEEEeeCC----CeEEEEECCC-CceEE-eecCCCC--eeEEEEcCCCcEEEE-ecCCe--EEEEec---
Q 018860 150 TVAWLHSDQTILSTCTDM----GGVRLWDVRS-GEIVQ-TLETKSP--VTSAEVSQDGRYITT-ADGST--VKFWDA--- 215 (349)
Q Consensus 150 ~~~~~~~~~~~l~~~~~d----g~v~vwd~~~-~~~~~-~~~~~~~--v~~~~~~~~~~~l~~-~~d~~--i~iwd~--- 215 (349)
++.|. .++.++.....+ ..|..+|+.+ +.... .+..... +..+.+.. +.++++ ..++. |.++|+
T Consensus 324 s~~~~-~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~dl~~~ 401 (751)
T 2xe4_A 324 DVQMH-GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWTMMADSQ 401 (751)
T ss_dssp EEEEE-TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEEEECCTT
T ss_pred EEeee-eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEEEecccc
Confidence 55543 355555554433 3677788765 23222 2333332 33444442 233333 34664 556665
Q ss_pred ----CCceeeEEEcCCCceEEeee------cCCCCCEEEEecCC---CeEEEEeCCCCcE
Q 018860 216 ----NHFGLVKSYNMPCTIESASL------EPKYGNKFVAGGED---MWVRFFDFHTGNE 262 (349)
Q Consensus 216 ----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~d---~~i~v~d~~~~~~ 262 (349)
......+.+..+.......+ .+.....+++.+.. ..++.+|+.+++.
T Consensus 402 ~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 402 DGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp TSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred cccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 23221333333332222233 22333454444332 4678888877653
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=0.00013 Score=66.32 Aligned_cols=233 Identities=10% Similarity=0.043 Sum_probs=132.7
Q ss_pred EEEEECC-CCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeC-CC----eEEEEECCCCCCCC
Q 018860 65 WSCCLDT-NALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGM-EK----ILRIFDLNRPDAPP 138 (349)
Q Consensus 65 ~~~~~~~-~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-d~----~i~lwd~~~~~~~~ 138 (349)
..++++| ++..|..+...+.|+.+|..++..............++|++++++|+.+.. .+ .+..++........
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~ 219 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVI 219 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSE
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeee
Confidence 5788887 345566555558899999987765555555556889999999996655543 21 23334432111101
Q ss_pred ceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEee--cCCCCeeEEEEcCCCcEE-EE-ecCCeEEEEe
Q 018860 139 REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL--ETKSPVTSAEVSQDGRYI-TT-ADGSTVKFWD 214 (349)
Q Consensus 139 ~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l-~~-~~d~~i~iwd 214 (349)
..+.. ......+++.|.++.++++-...+.|..+|+..+...... ........++++|++++| ++ ..++.|..++
T Consensus 220 ~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 220 TELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSD 298 (430)
T ss_dssp EEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred eeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEe
Confidence 12211 2234556677757777777666789999999876542222 222335689999999854 33 3468888887
Q ss_pred cCCc--ee--eEEEcCC----------------CceE-EeeecC-------CCCCEEEEecCCCeEEEEeCCCCcEEEEe
Q 018860 215 ANHF--GL--VKSYNMP----------------CTIE-SASLEP-------KYGNKFVAGGEDMWVRFFDFHTGNEIACN 266 (349)
Q Consensus 215 ~~~~--~~--~~~~~~~----------------~~~~-~~~~~~-------~~~~~~~~~~~d~~i~v~d~~~~~~~~~~ 266 (349)
.... .. +..+... ..+. .++..+ .++..+++-...+.|+.++ ..+......
T Consensus 299 ~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~ 377 (430)
T 3tc9_A 299 YDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFA 377 (430)
T ss_dssp EETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEE
T ss_pred CCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEE
Confidence 6531 11 1111100 0112 233321 1245555656778898888 345433221
Q ss_pred c-------C----------CCcceeEEEEccC-CCeEEEecCCCCEEEecC
Q 018860 267 K-------G----------HHGPVHCVRFSPG-GESYASGSEDGTIRIWQT 299 (349)
Q Consensus 267 ~-------~----------h~~~i~~l~~sp~-~~~l~sgs~Dg~v~vW~~ 299 (349)
. + .-.....++++|+ +.++++-...+.|+..++
T Consensus 378 g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 378 GRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp ECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred eCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 1 1 0124678999984 555555555666776654
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.45 E-value=0.00078 Score=60.30 Aligned_cols=241 Identities=8% Similarity=-0.118 Sum_probs=144.5
Q ss_pred EEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEEEECCCCCEEEEecc-CCeEEEEEE
Q 018860 33 FLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKVWDALTGDVLHSFEH-KHIVRACSF 110 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vWd~~~~~~~~~~~~-~~~v~~~~~ 110 (349)
+|+.+ ....|+..+.........+.+. .....++|++... .+++-...+.|..++..++.....+.. ......+++
T Consensus 89 ~l~~~-~~~~I~~i~~~~~~~~~~~~~~-~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav 166 (386)
T 3v65_B 89 VLLFA-NRIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV 166 (386)
T ss_dssp EEEEE-CBSCEEEECTTSCCCEEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEE
T ss_pred eeEee-cCccceeeccCCCcEEEEecCC-CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEE
Confidence 44434 3356777787766554444433 3467899996544 455555678999999887654443332 234467888
Q ss_pred cCCC-CEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceEEeecC-C
Q 018860 111 SEDT-HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDM-GGVRLWDVRSGEIVQTLET-K 187 (349)
Q Consensus 111 s~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-g~v~vwd~~~~~~~~~~~~-~ 187 (349)
.+.+ ++.++-...+.|.+.+++.... .............+++.|.++.++.+-... +.|...++........... -
T Consensus 167 d~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~ 245 (386)
T 3v65_B 167 DWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL 245 (386)
T ss_dssp ETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred EeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC
Confidence 8754 4445555677888888753221 112222334678888888888887776555 7888888764332222222 2
Q ss_pred CCeeEEEEcCCCcEEEE--ecCCeEEEEecCCceeeEEEcC-CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEE
Q 018860 188 SPVTSAEVSQDGRYITT--ADGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIA 264 (349)
Q Consensus 188 ~~v~~~~~~~~~~~l~~--~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~ 264 (349)
...+.++++|++..|.. +..+.|..+|+........... ...+..+++. .+..+++....+.|..++..+++...
T Consensus 246 ~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~ 323 (386)
T 3v65_B 246 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQE 323 (386)
T ss_dssp SCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEECCCCcceE
Confidence 33578999976654433 3467899999875433322222 1234556663 35666777778899999876776655
Q ss_pred EecCCCcceeEEEE
Q 018860 265 CNKGHHGPVHCVRF 278 (349)
Q Consensus 265 ~~~~h~~~i~~l~~ 278 (349)
.+.........+++
T Consensus 324 ~i~~~~~~p~gi~v 337 (386)
T 3v65_B 324 IIRNKLHFPMDIHT 337 (386)
T ss_dssp EEECSCSCCCCEEE
T ss_pred EEccCCCCCceEEE
Confidence 55433233344443
No 267
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.44 E-value=1.8e-05 Score=73.67 Aligned_cols=187 Identities=12% Similarity=0.099 Sum_probs=122.0
Q ss_pred CCCEEEEEe-CCCeEEEEECCCCCCCCceeccCCCCeEEEEEe--cCCCeEEEEe-----------------eCCCeEEE
Q 018860 113 DTHLLLTGG-MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWL--HSDQTILSTC-----------------TDMGGVRL 172 (349)
Q Consensus 113 ~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~~~-----------------~~dg~v~v 172 (349)
||++++... .+..|.+.|+.+.+............+..+++. |+.+++++++ ..++.+-+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 777776654 566789999876432111111222346677763 5666666653 33468999
Q ss_pred EECCCCceEEeecCCCCeeEEEEcCCCcEEEE-ecCC--------------------------------------eEEEE
Q 018860 173 WDVRSGEIVQTLETKSPVTSAEVSQDGRYITT-ADGS--------------------------------------TVKFW 213 (349)
Q Consensus 173 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d~--------------------------------------~i~iw 213 (349)
.|..+.+.+.++........+.++|+|+++.. +.+. .|.+.
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 99999998887764334456788999988654 3221 36677
Q ss_pred ecCC--cee-eEEEcCCCceEEeeecCCCCCEEE-EecCCCeEEEEeCCCCc------------EEEEecCCCcceeEEE
Q 018860 214 DANH--FGL-VKSYNMPCTIESASLEPKYGNKFV-AGGEDMWVRFFDFHTGN------------EIACNKGHHGPVHCVR 277 (349)
Q Consensus 214 d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~i~v~d~~~~~------------~~~~~~~h~~~i~~l~ 277 (349)
|..+ ... +..+..+..+..+.++|+ +++++ ++..+.+|.++|+.+.+ ......-- .....++
T Consensus 260 D~~~~~~~~~~~~Ipvg~~PhGv~~sPD-Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~h~a 337 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPIANNPHGCNMAPD-KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPLHTA 337 (595)
T ss_dssp ECSGGGCCSSEEEEEEESSCCCEEECTT-SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEEEEE
T ss_pred eCcccCCceeEEEEecCCCceEEEEcCC-CCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcceEE
Confidence 7776 334 455555555667788885 66555 45578999999998653 23333322 3468899
Q ss_pred EccCCCeEEEecCCCCEEEecCCC
Q 018860 278 FSPGGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 278 ~sp~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
|+|+|...++--.|++|.+||++.
T Consensus 338 F~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 338 FDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ECCCCeEEEEEecCCcEEEEEhhH
Confidence 999994345677899999999754
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.44 E-value=0.00079 Score=60.26 Aligned_cols=231 Identities=7% Similarity=-0.057 Sum_probs=142.0
Q ss_pred EEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCCCCCceecc
Q 018860 65 WSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLL-LTGGMEKILRIFDLNRPDAPPREVDR 143 (349)
Q Consensus 65 ~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~ 143 (349)
.|.+..+.+.++++ ....|+..++.+...............++|.+.+..| .+-...+.|..++++.... ......
T Consensus 80 ~C~~~~~~~~l~~~--~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~ 156 (386)
T 3v65_B 80 SCKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVST 156 (386)
T ss_dssp CEEECSSCCEEEEE--CBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-EEEECS
T ss_pred eECCccccceeEee--cCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-EEEEeC
Confidence 34455554433333 3456888898876655555555567899999755544 4555678888898864321 111111
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEEe--cC-CeEEEEecCCce
Q 018860 144 SPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTA--DG-STVKFWDANHFG 219 (349)
Q Consensus 144 ~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~--~d-~~i~iwd~~~~~ 219 (349)
.......+++.+.++.+..+-...+.|.+.++........+.. ......+++.|.+..|..+ .. +.|..+++....
T Consensus 157 ~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 236 (386)
T 3v65_B 157 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 236 (386)
T ss_dssp SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC
Confidence 1223455677766777777776668899988865433222222 2345788899866554433 23 678888876543
Q ss_pred eeEEEcCC-CceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 220 LVKSYNMP-CTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 220 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
........ ..+..++++|..+.++++-+..+.|+.+|+........+...-.....+++ ..+..+++-...+.|..++
T Consensus 237 ~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 237 RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 33322222 235788898776677777788899999998754443333333445677888 4555566767777788877
Q ss_pred C
Q 018860 299 T 299 (349)
Q Consensus 299 ~ 299 (349)
.
T Consensus 316 ~ 316 (386)
T 3v65_B 316 K 316 (386)
T ss_dssp T
T ss_pred C
Confidence 3
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.44 E-value=0.00073 Score=59.59 Aligned_cols=231 Identities=7% Similarity=-0.055 Sum_probs=141.6
Q ss_pred eEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCCCCCceec
Q 018860 64 VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLL-TGGMEKILRIFDLNRPDAPPREVD 142 (349)
Q Consensus 64 v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d~~i~lwd~~~~~~~~~~~~ 142 (349)
..|.+..+++.++++ ....|+..++.+......+........++|.+....|. +-...+.|..++++.... .....
T Consensus 36 ~~C~~~~~~~~ll~~--~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~ 112 (349)
T 3v64_C 36 RSCKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVS 112 (349)
T ss_dssp SCEEESSSCCEEEEE--CBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEC
T ss_pred CcccccccCceeEee--cccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-eEEEe
Confidence 345555554433333 33458888887766555555455678999997655554 545678888898865332 11111
Q ss_pred cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeec-CCCCeeEEEEcCCCcEEEEe--cC-CeEEEEecCCc
Q 018860 143 RSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDGRYITTA--DG-STVKFWDANHF 218 (349)
Q Consensus 143 ~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~d-~~i~iwd~~~~ 218 (349)
........+++.+.++.+..+-...+.|.+.++........+. .......+++.|.+..|..+ .. +.|..+++...
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 1223345677777777777777767899999986543322222 22345788999865544333 24 67888887654
Q ss_pred eeeEEEcC-CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEe
Q 018860 219 GLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297 (349)
Q Consensus 219 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW 297 (349)
........ -..+..+++++..+.++++-...+.|+.+|+........+...-.....+++ ..+..+++-...+.|...
T Consensus 193 ~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~ 271 (349)
T 3v64_C 193 GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSA 271 (349)
T ss_dssp SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEE
T ss_pred CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEE
Confidence 32222221 1235788998876777777778899999998754433333333445677888 345555666667777777
Q ss_pred c
Q 018860 298 Q 298 (349)
Q Consensus 298 ~ 298 (349)
+
T Consensus 272 ~ 272 (349)
T 3v64_C 272 N 272 (349)
T ss_dssp E
T ss_pred E
Confidence 6
No 270
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.44 E-value=0.00029 Score=64.13 Aligned_cols=232 Identities=10% Similarity=0.050 Sum_probs=132.8
Q ss_pred eEEEEECCC--CCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEeCC---Ce-EEEEECCCCCCC
Q 018860 64 VWSCCLDTN--ALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGGME---KI-LRIFDLNRPDAP 137 (349)
Q Consensus 64 v~~~~~~~~--~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~-i~lwd~~~~~~~ 137 (349)
-..++++++ ...|..+...+.|+.++..++..............++++++|+++++.... .. +...+... ...
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~-~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS-GFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG-TTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC-Cee
Confidence 357899984 334554444489999999888766655555568899999999955554321 22 22222211 111
Q ss_pred C-ceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEee-cC--CCCeeEEEEcCCCcEEEEe--cCCeEE
Q 018860 138 P-REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTL-ET--KSPVTSAEVSQDGRYITTA--DGSTVK 211 (349)
Q Consensus 138 ~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~--~~~v~~~~~~~~~~~l~~~--~d~~i~ 211 (349)
. ..+. .......+++.+.++.+.++...++.|+.+|..++.....+ .. ...-..++++|++..|..+ ..+.|.
T Consensus 220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 0 1111 12234456666656777767666789999999877662222 21 1223468999999854333 367899
Q ss_pred EEecCC--cee--eEEE-cC---------------CCceEEeeec--------CCCCCEEEEecCCCeEEEEeCCCCcEE
Q 018860 212 FWDANH--FGL--VKSY-NM---------------PCTIESASLE--------PKYGNKFVAGGEDMWVRFFDFHTGNEI 263 (349)
Q Consensus 212 iwd~~~--~~~--~~~~-~~---------------~~~~~~~~~~--------~~~~~~~~~~~~d~~i~v~d~~~~~~~ 263 (349)
.++... ... ...+ .. -..+..+++. ...++++++-...+.|+.++. ++...
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~ 377 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT 377 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE
Confidence 887652 211 1111 00 0124456661 234566777778889999985 45433
Q ss_pred EEecCC------------------CcceeEEEEc-cCCCeEEEecCCCCEEEecC
Q 018860 264 ACNKGH------------------HGPVHCVRFS-PGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 264 ~~~~~h------------------~~~i~~l~~s-p~~~~l~sgs~Dg~v~vW~~ 299 (349)
.+-+. -.....|++. +++.++++=...+.|+..++
T Consensus 378 -t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 378 -TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp -EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred -EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 22211 1235678888 55655555555666766653
No 271
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.43 E-value=0.00049 Score=59.40 Aligned_cols=211 Identities=10% Similarity=0.032 Sum_probs=123.2
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeC-CC-eEEEEECCCCCE
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASA-DF-SAKVWDALTGDV 95 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~-~i~vWd~~~~~~ 95 (349)
....++|+| +|+++++-..++.|..++... .....+.. ......++++++++++++... ++ .|..++..+++.
T Consensus 33 ~pegia~~~---~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 33 FLENLASAP---DGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CEEEEEECT---TSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CcceEEECC---CCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 345778876 787777766778888888764 44433332 235788999999986665543 22 466677777775
Q ss_pred EEEec--cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCc---------eeccCCCCeEEEEEecCCCeEEEEe
Q 018860 96 LHSFE--HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPR---------EVDRSPGSVRTVAWLHSDQTILSTC 164 (349)
Q Consensus 96 ~~~~~--~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~~l~~~ 164 (349)
..... .......++..+++..+++-..++.|..+|......... ...........+ +++++.++++-
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 44332 222345555556665555555678888888653210000 000111233444 55666777777
Q ss_pred eCCCeEEEEECCC-Cce--EEeecCCCCeeEEEEcCCCcEEEEe-cCCeEEEEecCCceeeE--EEcCC-CceEEeeec
Q 018860 165 TDMGGVRLWDVRS-GEI--VQTLETKSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVK--SYNMP-CTIESASLE 236 (349)
Q Consensus 165 ~~dg~v~vwd~~~-~~~--~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~iwd~~~~~~~~--~~~~~-~~~~~~~~~ 236 (349)
...+.|..+|+.. ++. ...+........+++.++|+++++. ..+.|..+|.. ++... ....+ ..+..++|.
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred CCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEe
Confidence 7778999999864 332 1111111223557888999877665 36789999976 33322 22333 345667776
No 272
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.41 E-value=0.00079 Score=58.76 Aligned_cols=268 Identities=10% Similarity=0.049 Sum_probs=142.4
Q ss_pred CCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCC-CeEEE-ee--cccCCeEEEEECCCCCeeEEeeCCCeEEEEECC
Q 018860 16 SRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETG-DWIGT-FE--GHKGAVWSCCLDTNALRAASASADFSAKVWDAL 91 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~-~~~~~-~~--~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~ 91 (349)
...+.+|.|.+ ++..++ ++.++.+.. ..+.+ .+... +. .....+.++.|++ +. +..++.++.|.. ...
T Consensus 35 ~~~~~~v~~~~---~~~~~~-~G~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~D 106 (327)
T 2xbg_A 35 TATILDMSFID---RHHGWL-VGVNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTD 106 (327)
T ss_dssp SSCEEEEEESS---SSCEEE-EETTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESS
T ss_pred CCcEEEEEECC---CCcEEE-EcCCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECC
Confidence 34688898864 455566 445665432 22223 23322 11 1244688889976 33 444566675543 344
Q ss_pred CCCEEEEec----cCCeEEEEEEcCCCCEEEEEeCCCeE-EEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeC
Q 018860 92 TGDVLHSFE----HKHIVRACSFSEDTHLLLTGGMEKIL-RIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTD 166 (349)
Q Consensus 92 ~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~d~~i-~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 166 (349)
.|+.-.... ++..+..+.+.+++..++.+. ++.+ +-.| ...............+..+.+.+++ .+++.+..
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~-~~~~~g~~ 182 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSG-EYVAVSSR 182 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTS-CEEEEETT
T ss_pred CCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCC-cEEEEECC
Confidence 455433332 234567787777776666554 4543 3333 1222222223344568888887654 45555544
Q ss_pred CCeEEEEECCCCceEE-eecCCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcCC-----CceEEeeecCCCC
Q 018860 167 MGGVRLWDVRSGEIVQ-TLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNMP-----CTIESASLEPKYG 240 (349)
Q Consensus 167 dg~v~vwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 240 (349)
.+..+-+|-....... .......+..+.+.+++.+++++.++.+.+.+...+..-.....+ ..+..+.+.+ ++
T Consensus 183 G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~-~~ 261 (327)
T 2xbg_A 183 GSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT-PN 261 (327)
T ss_dssp SSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS-SS
T ss_pred CcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC-CC
Confidence 2333444431111111 122334677888899998888888888877643222221112211 2355666665 34
Q ss_pred CEEEEecCCCeEEEEeCCCCcEEEEec---CCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 241 NKFVAGGEDMWVRFFDFHTGNEIACNK---GHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 241 ~~~~~~~~d~~i~v~d~~~~~~~~~~~---~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
..+++ +.++.| .+....++.-..+. .....+.++.|.+++. ++.++.+|.|.-++-
T Consensus 262 ~~~~~-g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 262 EVWLA-GGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp CEEEE-ESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred EEEEE-eCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 55554 446666 33444444333332 2345688999976554 666778898877753
No 273
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.35 E-value=0.00027 Score=66.91 Aligned_cols=267 Identities=15% Similarity=0.136 Sum_probs=151.2
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEeecccCCe---------EEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAV---------WSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v---------~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~ 100 (349)
++. |..++.++.+.-+|.++++.+..++.....- ..+++ .+..++.++.|+.+.-+|..+|+.+-.+.
T Consensus 68 ~g~-vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 68 DGV-IYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTE-EEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CCE-EEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 444 4455553448888999999887776543210 11222 24467778889999999999999876554
Q ss_pred cCC-----eEE---EEEEc-CCCC-EEEEEe------CCCeEEEEECCCCCCCCceeccCC-------------------
Q 018860 101 HKH-----IVR---ACSFS-EDTH-LLLTGG------MEKILRIFDLNRPDAPPREVDRSP------------------- 145 (349)
Q Consensus 101 ~~~-----~v~---~~~~s-~~~~-~l~s~~------~d~~i~lwd~~~~~~~~~~~~~~~------------------- 145 (349)
... .+. .+.=. .+++ .++.++ .++.+..+|..+.+.... .....
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~-~~~~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM-RPFVEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE-EESSTTCEEEETTEEEEESSCTTC
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee-cCCCccccccccCccccccccccc
Confidence 211 111 11100 1222 555554 378888888776543211 00000
Q ss_pred ----------------------CCeEEEEEecCCCeEEEEeeC-------------------C----CeEEEEECCCCce
Q 018860 146 ----------------------GSVRTVAWLHSDQTILSTCTD-------------------M----GGVRLWDVRSGEI 180 (349)
Q Consensus 146 ----------------------~~i~~~~~~~~~~~~l~~~~~-------------------d----g~v~vwd~~~~~~ 180 (349)
..-...++.+..+.+++..++ | +.|.-+|.++|+.
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 000123455555666554431 2 5899999999988
Q ss_pred EEeecC--C---------CCeeEEEEc-CCCc---EEE-EecCCeEEEEecCCceeeEEEcCCCce--------------
Q 018860 181 VQTLET--K---------SPVTSAEVS-QDGR---YIT-TADGSTVKFWDANHFGLVKSYNMPCTI-------------- 230 (349)
Q Consensus 181 ~~~~~~--~---------~~v~~~~~~-~~~~---~l~-~~~d~~i~iwd~~~~~~~~~~~~~~~~-------------- 230 (349)
+=.++. + .++. +... .+|+ ++. ++.++.+.++|..+++++..+.....+
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~ 382 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPV 382 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEE
T ss_pred EEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEe
Confidence 755532 1 1221 2221 4563 444 456899999999988877655443200
Q ss_pred --------------------------------EEeeecCCCCCEEEEe--------------------------------
Q 018860 231 --------------------------------ESASLEPKYGNKFVAG-------------------------------- 246 (349)
Q Consensus 231 --------------------------------~~~~~~~~~~~~~~~~-------------------------------- 246 (349)
..++++|..+..++..
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~ 462 (582)
T 1flg_A 383 EREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYD 462 (582)
T ss_dssp ECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCS
T ss_pred EccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCC
Confidence 0223444333333321
Q ss_pred cCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCCCC
Q 018860 247 GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 247 ~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~~~ 302 (349)
..++.|+.||+.+++.+=..... .++..-.+...+..++.|+.||.|+.||...+
T Consensus 463 ~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 463 DHVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp SCSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 13688999999999876443322 22222223335667888999999999998654
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.27 E-value=0.0019 Score=56.95 Aligned_cols=230 Identities=7% Similarity=-0.113 Sum_probs=140.2
Q ss_pred EEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEEEECCCCCEEEEecc-CCeEEEEEE
Q 018860 33 FLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKVWDALTGDVLHSFEH-KHIVRACSF 110 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vWd~~~~~~~~~~~~-~~~v~~~~~ 110 (349)
+|+-+ ....|+..+.........+.+.. ....++|++... .+++-...+.|..++..++.....+.. ......+++
T Consensus 46 ~ll~~-~~~~I~~i~~~g~~~~~~~~~~~-~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav 123 (349)
T 3v64_C 46 VLLFA-NRIDIRQVLPHRSEYTLLLNNLE-NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV 123 (349)
T ss_dssp EEEEE-CBSCEEEECTTSCCEEEEECSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEE
T ss_pred eeEee-cccceEEEeCCCCeeEEeecCCC-ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEE
Confidence 44433 33557777776655544444433 467899996544 445555678999999887654443332 234567888
Q ss_pred cCC-CCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceEEeec-CC
Q 018860 111 SED-THLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDM-GGVRLWDVRSGEIVQTLE-TK 187 (349)
Q Consensus 111 s~~-~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-g~v~vwd~~~~~~~~~~~-~~ 187 (349)
.+. +++.++-...+.|.+.+++.... .............+++.|.++.++.+-... +.|...++........+. .-
T Consensus 124 d~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~ 202 (349)
T 3v64_C 124 DWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHL 202 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSC
T ss_pred ecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCC
Confidence 875 45555656678899999864321 112222334578899888888887776655 789888876433222222 12
Q ss_pred CCeeEEEEcCCCcEEEEe--cCCeEEEEecCCceeeEEEcC-CCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEE
Q 018860 188 SPVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNM-PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIA 264 (349)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~ 264 (349)
...+.++++|++..|.-+ ..+.|..+|+........... ...+..+++. .+..+++-...+.|..++..+++...
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~~~ 280 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKNQE 280 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred CCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCCccE
Confidence 345789999866554333 367899999875433322222 1234556663 35666676778889888866666555
Q ss_pred Eec
Q 018860 265 CNK 267 (349)
Q Consensus 265 ~~~ 267 (349)
.+.
T Consensus 281 ~i~ 283 (349)
T 3v64_C 281 IIR 283 (349)
T ss_dssp EEE
T ss_pred Eec
Confidence 443
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.24 E-value=0.001 Score=60.50 Aligned_cols=238 Identities=10% Similarity=0.025 Sum_probs=130.8
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCC---Ce-EEEEECCC
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASAD---FS-AKVWDALT 92 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~-i~vWd~~~ 92 (349)
.....|+|+|.+.+|. |..+...+.|+.++..++.... +-+.-.....+++++++..+++.... .. +...+...
T Consensus 139 ~~P~gvavd~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDD-LYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCE-EEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCE-EEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 3456888886211354 4444444788888887766543 33334457899999999955554321 12 22223222
Q ss_pred CCE-EEEeccCCeEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCCCCcee-ccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 018860 93 GDV-LHSFEHKHIVRACSFSE-DTHLLLTGGMEKILRIFDLNRPDAPPREV-DRSPGSVRTVAWLHSDQTILSTCTDMGG 169 (349)
Q Consensus 93 ~~~-~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 169 (349)
+.. ...+........+++.| ++++.++-..++.|+.++........... .........++|.|.+..+.++-...+.
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 211 01111222345678899 77766666677888888875332100111 1111223468888877767766666789
Q ss_pred EEEEECC--CCceE--EeecC----------------CCCeeEEEE---------cCCCcEEEEe-cCCeEEEEecCCce
Q 018860 170 VRLWDVR--SGEIV--QTLET----------------KSPVTSAEV---------SQDGRYITTA-DGSTVKFWDANHFG 219 (349)
Q Consensus 170 v~vwd~~--~~~~~--~~~~~----------------~~~v~~~~~---------~~~~~~l~~~-~d~~i~iwd~~~~~ 219 (349)
|+.+|.. ++... ..+.. -.....+++ .+++.+.++- .++.|+.++.. +.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-GR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-SE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-CC
Confidence 9998864 33211 11110 012345777 6666666554 46789988863 33
Q ss_pred eeEEEcCC------------------CceEEeeecCCCCCEEEEecCCCeEEEEeC
Q 018860 220 LVKSYNMP------------------CTIESASLEPKYGNKFVAGGEDMWVRFFDF 257 (349)
Q Consensus 220 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~ 257 (349)
........ ..+..+++.|..+..+++-..++.|+.+++
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 32222110 124567777555666666666777777664
No 276
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.19 E-value=0.0016 Score=59.18 Aligned_cols=236 Identities=10% Similarity=0.045 Sum_probs=129.4
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeC-CC----eEEEEECCC
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASA-DF----SAKVWDALT 92 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~----~i~vWd~~~ 92 (349)
....++++|. ++..|..+...+.|+.++..++... .+-.....-..++|++++++|..+.. .+ .+.+.+...
T Consensus 138 ~P~~lavdp~--~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPK--NHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETT--EEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCC--CCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 4567888751 1334555555577888888765543 33333445678999999995555543 21 343344322
Q ss_pred CCE-EEEeccCCeEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 018860 93 GDV-LHSFEHKHIVRACSFSE-DTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 93 ~~~-~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
... ...+........++++| ++.++++-...+.|..++....................++|.|.+..++++-...+.|
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 211 12222122345678999 7777777667788999998643210011111123467789988877677676677899
Q ss_pred EEEECCC--Cce--EEeecC-----------------CCCeeEEEEc--------CCCcEEEEe-cCCeEEEEecCCcee
Q 018860 171 RLWDVRS--GEI--VQTLET-----------------KSPVTSAEVS--------QDGRYITTA-DGSTVKFWDANHFGL 220 (349)
Q Consensus 171 ~vwd~~~--~~~--~~~~~~-----------------~~~v~~~~~~--------~~~~~l~~~-~d~~i~iwd~~~~~~ 220 (349)
..++... ++. ...+.. ..|...+.+. +++.+.++- .++.|+.++.. +..
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~-G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQ-GRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTT-SEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECCC-CcE
Confidence 9987642 221 111110 0111134442 335555553 46788888843 333
Q ss_pred eEEEcC---------C---------CceEEeeecCCCCCEEEEecCCCeEEEEeC
Q 018860 221 VKSYNM---------P---------CTIESASLEPKYGNKFVAGGEDMWVRFFDF 257 (349)
Q Consensus 221 ~~~~~~---------~---------~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~ 257 (349)
...... . ..+..+++.+..+..+++-..++.|+.++.
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 322221 0 135567777644556666666777777664
No 277
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.16 E-value=0.0032 Score=57.86 Aligned_cols=236 Identities=10% Similarity=0.030 Sum_probs=136.8
Q ss_pred eEEEEECCC--CCeeEEeeCCCeEEEEECCCCCEEEEecc----CCeEEEEEE-------cCCCCEEEEEeCCC------
Q 018860 64 VWSCCLDTN--ALRAASASADFSAKVWDALTGDVLHSFEH----KHIVRACSF-------SEDTHLLLTGGMEK------ 124 (349)
Q Consensus 64 v~~~~~~~~--~~~l~s~s~D~~i~vWd~~~~~~~~~~~~----~~~v~~~~~-------s~~~~~l~s~~~d~------ 124 (349)
-..++|+|. +.++++....+.|++.|..++........ ......++| +++++.|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 357889973 44444444457799999887766554432 135889999 99999666665443
Q ss_pred -eEEEEECCCCCCCC-----ceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECC-------CCce-----------
Q 018860 125 -ILRIFDLNRPDAPP-----REVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVR-------SGEI----------- 180 (349)
Q Consensus 125 -~i~lwd~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~-------~~~~----------- 180 (349)
.+.+++........ ..+... .....++..|.++.++++....+.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 25556533211111 112111 1234556677678888888788899999987 5543
Q ss_pred ---EEeecCCCCeeEEEEcCCCcEEEEe--cCCeEEEEecCC--cee--eEEE-cC---C------------CceE-Eee
Q 018860 181 ---VQTLETKSPVTSAEVSQDGRYITTA--DGSTVKFWDANH--FGL--VKSY-NM---P------------CTIE-SAS 234 (349)
Q Consensus 181 ---~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~iwd~~~--~~~--~~~~-~~---~------------~~~~-~~~ 234 (349)
+..+........++++|++..|..+ ....|+.++... ... ...+ .. . ..+. .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 1122222334689999999854433 467888866432 221 0111 00 0 0122 233
Q ss_pred ecC------CCCCEEEEecCCCeEEEEeCCCCcEEEEecCC------------------------CcceeEEEEccC-CC
Q 018860 235 LEP------KYGNKFVAGGEDMWVRFFDFHTGNEIACNKGH------------------------HGPVHCVRFSPG-GE 283 (349)
Q Consensus 235 ~~~------~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h------------------------~~~i~~l~~sp~-~~ 283 (349)
... ..+.++++-..++.||.++ .++.. .++-+. -.....|++.++ +.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEe-CCCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 321 2356677777889999998 45543 332111 123567888886 66
Q ss_pred eEEEecCCCCEEEecCCCC
Q 018860 284 SYASGSEDGTIRIWQTGPV 302 (349)
Q Consensus 284 ~l~sgs~Dg~v~vW~~~~~ 302 (349)
++++=+....|+.+++...
T Consensus 458 lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp EEEEETTTTEEEEEEECCC
T ss_pred EEEEeCCCCEEEEEECCCC
Confidence 6666666677888876543
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.15 E-value=0.004 Score=55.93 Aligned_cols=218 Identities=10% Similarity=0.014 Sum_probs=137.3
Q ss_pred CCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCC--CCCc-eeccCCCCeEEEEEecC
Q 018860 81 ADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLL-TGGMEKILRIFDLNRPD--APPR-EVDRSPGSVRTVAWLHS 156 (349)
Q Consensus 81 ~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~d~~i~lwd~~~~~--~~~~-~~~~~~~~i~~~~~~~~ 156 (349)
....|+.-++........+.....+..++|++.+..|. +-...+.|+.+++.... .... ...........+++.+.
T Consensus 90 ~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp ETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred ccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 34678999988776655565566788999998655554 44567888888886422 1112 22223345677887776
Q ss_pred CCeEEEEeeCCCeEEEEECCCCceEEeec-CCCCeeEEEEcCCCcEEEEec---CCeEEEEecCCceeeEEEcCC-CceE
Q 018860 157 DQTILSTCTDMGGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDGRYITTAD---GSTVKFWDANHFGLVKSYNMP-CTIE 231 (349)
Q Consensus 157 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~---d~~i~iwd~~~~~~~~~~~~~-~~~~ 231 (349)
++.+..+-...+.|.+.++........+. .......+++.|.+.+|..++ .+.|...++............ ..+.
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~ 249 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 249 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceE
Confidence 77777777777899999987654433333 233467889998655544332 367888887654433332222 3467
Q ss_pred EeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecC--CCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG--HHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~--h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
.+++++..++++++-+..+.|+.+|+........... .-.....+++. .+..+++-...+.|..++.
T Consensus 250 glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEES
T ss_pred EEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEc
Confidence 8899887666667777889999999875443333222 22345577773 3445556667778888874
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.13 E-value=0.0034 Score=54.52 Aligned_cols=218 Identities=10% Similarity=0.006 Sum_probs=132.4
Q ss_pred CCeEEEEECCCCC--EEEEeccCCeEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCC
Q 018860 82 DFSAKVWDALTGD--VLHSFEHKHIVRACSFSEDT-HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQ 158 (349)
Q Consensus 82 D~~i~vWd~~~~~--~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 158 (349)
...|+..++.+.. ....+.......+++|.+.+ .+..+-...+.|..++++..................+++.+.++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 4578999987653 22222222346688998854 44455556788999998654322222222223455677776677
Q ss_pred eEEEEeeCCCeEEEEECCCCceEEee-cCCCCeeEEEEcCCCcEEEEec---CCeEEEEecCCceeeEEEcC-CCceEEe
Q 018860 159 TILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYITTAD---GSTVKFWDANHFGLVKSYNM-PCTIESA 233 (349)
Q Consensus 159 ~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~---d~~i~iwd~~~~~~~~~~~~-~~~~~~~ 233 (349)
.+..+-...+.|.++++........+ ........+++.|.+..|..++ .+.|...++........... -..+..+
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pngl 171 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 171 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEE
Confidence 77777666689999998654322222 2233457888888654443332 46788888764332222221 1245788
Q ss_pred eecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 234 SLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 234 ~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
++++..+..+++-+..+.|+.+|+..........+.-.....+++. .+..+.+-...+.|..++..
T Consensus 172 avd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 172 TLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECC
Confidence 9988666677777888999999987543332333333455677775 34455566667778888763
No 280
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.13 E-value=0.0026 Score=53.16 Aligned_cols=199 Identities=11% Similarity=0.118 Sum_probs=130.2
Q ss_pred eccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeec-ccCCeEEEEECCCCCeeEEeeCCCeEEEEEC
Q 018860 12 CHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEG-HKGAVWSCCLDTNALRAASASADFSAKVWDA 90 (349)
Q Consensus 12 ~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~ 90 (349)
+.|=.+.+..++|+|. ++.+.++...++.|...+.. ++.++.+.- -......+++..++.++++.-.++.+.++++
T Consensus 22 l~g~~~~lSGla~~~~--~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQ--SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp CTTCCSCEEEEEEETT--TTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CCCcccCcceeEEeCC--CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 3455567999999972 34455556667777778877 888877742 1245778899898887777667788888887
Q ss_pred CCCCE---EEEec-------cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CCCCCcee-------ccCCCCeEEE
Q 018860 91 LTGDV---LHSFE-------HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNR--PDAPPREV-------DRSPGSVRTV 151 (349)
Q Consensus 91 ~~~~~---~~~~~-------~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~--~~~~~~~~-------~~~~~~i~~~ 151 (349)
..... +.... .......++|.|.++.|.++.......+|.++. ........ ......+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 54432 22221 223468999999987777776554556665531 00011111 0122356789
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCC----------CCeeEEEEcCCCcEEEEecCCeEEEEe
Q 018860 152 AWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETK----------SPVTSAEVSQDGRYITTADGSTVKFWD 214 (349)
Q Consensus 152 ~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~d~~i~iwd 214 (349)
++.|..+.+++.+...+.+.++|.. |+.+..+.-. ..-..+++.++|++.++++.+.+..+.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 9999999888888888899999965 5555544322 235788999999887777766544443
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.10 E-value=0.004 Score=53.97 Aligned_cols=229 Identities=6% Similarity=-0.116 Sum_probs=137.3
Q ss_pred EEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEEEECCC----CCEEEEec-cCCeEE
Q 018860 33 FLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKVWDALT----GDVLHSFE-HKHIVR 106 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vWd~~~----~~~~~~~~-~~~~v~ 106 (349)
+|+-+.. ..|+..+..+.+....+.. -.....++|++++. .+++-...+.|..++..+ ......+. .-....
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 3443433 5678888877666554443 34567899997654 555555678999999876 22222222 113457
Q ss_pred EEEEcCCC-CEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceEEee
Q 018860 107 ACSFSEDT-HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDM-GGVRLWDVRSGEIVQTL 184 (349)
Q Consensus 107 ~~~~s~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-g~v~vwd~~~~~~~~~~ 184 (349)
.+++.+.+ ++.++-...+.|.+++++.... .............++..|.++.++.+.... +.|...++.. .....+
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~ 158 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSL 158 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEE
Confidence 88888754 4445556778899999864221 112222334678888888788777766543 6888888753 333222
Q ss_pred -c-CCCCeeEEEEcCCCcEEEEe--cCCeEEEEecCCceeeEEEcC---CCceEEeeecCCCCCEEEEecCCCeEEEEeC
Q 018860 185 -E-TKSPVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNM---PCTIESASLEPKYGNKFVAGGEDMWVRFFDF 257 (349)
Q Consensus 185 -~-~~~~v~~~~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~ 257 (349)
. .-...+.+++++++..|..+ ..+.|..+|+........... ...+..+++. .+..+++....+.|..++.
T Consensus 159 ~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 159 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEET
T ss_pred EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeC
Confidence 1 22345788999876555433 367899999875332222221 1234556664 3566667777889999998
Q ss_pred CCCcEEEEec
Q 018860 258 HTGNEIACNK 267 (349)
Q Consensus 258 ~~~~~~~~~~ 267 (349)
.+++.+..+.
T Consensus 237 ~~g~~~~~i~ 246 (316)
T 1ijq_A 237 LTGSDVNLLA 246 (316)
T ss_dssp TTCCCCEEEE
T ss_pred CCCcceEEEe
Confidence 7776555443
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.09 E-value=0.0053 Score=55.13 Aligned_cols=240 Identities=6% Similarity=-0.127 Sum_probs=143.4
Q ss_pred EEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEEEECCCC----CEEEEec-cCCeEE
Q 018860 33 FLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKVWDALTG----DVLHSFE-HKHIVR 106 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vWd~~~~----~~~~~~~-~~~~v~ 106 (349)
+|+.+. ...|+..+.........+.. -..+..++|++... ..++-...+.|+.+++.+. .....+. ......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~-~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccc-cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 455443 36778778776655444433 34578899997544 4455556788999998752 2222232 334577
Q ss_pred EEEEcCC-CCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeC-CCeEEEEECCCCceEEee
Q 018860 107 ACSFSED-THLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTD-MGGVRLWDVRSGEIVQTL 184 (349)
Q Consensus 107 ~~~~s~~-~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~-dg~v~vwd~~~~~~~~~~ 184 (349)
.+++.+. +++.++-...+.|.+.+++.... ...+.........+++.|.++.++.+-.. .+.|...++........+
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSE-EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCce-EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 8999874 55555556678898888764321 11222233457888888878877766533 368888888643332222
Q ss_pred cC-CCCeeEEEEcCCCcEEEEe--cCCeEEEEecCCceeeEEEcC---CCceEEeeecCCCCCEEEEecCCCeEEEEeCC
Q 018860 185 ET-KSPVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNM---PCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258 (349)
Q Consensus 185 ~~-~~~v~~~~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 258 (349)
.. -...+.+++.+++..|.-+ ..+.|..+|+........... -..+..+++. .+..+.+....+.|..+|..
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcC
Confidence 22 2345789999876655443 367899999875443333222 1234455553 35566677777889999977
Q ss_pred CCcEEEEecCCCcceeEEE
Q 018860 259 TGNEIACNKGHHGPVHCVR 277 (349)
Q Consensus 259 ~~~~~~~~~~h~~~i~~l~ 277 (349)
+++.+..+.........++
T Consensus 320 ~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 320 TGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp SCCCCEEEECSCSCEEEEE
T ss_pred CCCceEEEecCCCCCceEE
Confidence 7776655543333344443
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.08 E-value=0.01 Score=58.07 Aligned_cols=229 Identities=6% Similarity=-0.120 Sum_probs=136.4
Q ss_pred EEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCC-CCeeEEeeCCCeEEEEECCCC----CEEEEec-cCCeEE
Q 018860 33 FLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTN-ALRAASASADFSAKVWDALTG----DVLHSFE-HKHIVR 106 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~vWd~~~~----~~~~~~~-~~~~v~ 106 (349)
+|+.+ ....|+..+.........+.+ ...+..++|++. +.++++-...+.|+.+++... .....+. .-....
T Consensus 397 ~Ll~a-n~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFT-NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEE-CBSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred ccccc-cccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 44433 335677777765555444443 345678999874 445556666788999998753 2222222 223456
Q ss_pred EEEEcCCCC-EEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceEEee
Q 018860 107 ACSFSEDTH-LLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDM-GGVRLWDVRSGEIVQTL 184 (349)
Q Consensus 107 ~~~~s~~~~-~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d-g~v~vwd~~~~~~~~~~ 184 (349)
.|++.+.+. +.++-...+.|.+.+++.... ...+.........|++.|..+.++.+-... +.|.+.++........+
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 789988764 445555778899999864321 112222334578899888878777765433 67888888644333333
Q ss_pred cC-CCCeeEEEEcCCCcEEEEe--cCCeEEEEecCCceeeEEEcC---CCceEEeeecCCCCCEEEEecCCCeEEEEeCC
Q 018860 185 ET-KSPVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNM---PCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258 (349)
Q Consensus 185 ~~-~~~v~~~~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 258 (349)
.. -...+.+++.+.+..|..+ ....|...++........... -.....+++. .+.++++-...+.|...|..
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCC
Confidence 32 2346788888765554433 357899999876544333322 1233455553 24566666778899999877
Q ss_pred CCcEEEEe
Q 018860 259 TGNEIACN 266 (349)
Q Consensus 259 ~~~~~~~~ 266 (349)
+++.+..+
T Consensus 632 tG~~~~~l 639 (791)
T 3m0c_C 632 TGSDVNLL 639 (791)
T ss_dssp TCCCCEEE
T ss_pred CCcceEEe
Confidence 77554443
No 284
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.05 E-value=0.005 Score=53.61 Aligned_cols=227 Identities=7% Similarity=-0.017 Sum_probs=122.2
Q ss_pred CCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCC-CeEEEee--cccCCeEEEEECCCCCeeEEeeCCCeE-EEEECC
Q 018860 16 SRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETG-DWIGTFE--GHKGAVWSCCLDTNALRAASASADFSA-KVWDAL 91 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~-~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~D~~i-~vWd~~ 91 (349)
...+.+|.|+| +..++ ++.++.+.. ..+.+ .+..... .+...+..+.+.+++..++.+ .++.| |-+ .
T Consensus 79 ~~~~~~i~~~~----~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~--D 149 (327)
T 2xbg_A 79 DYRFNSVSFQG----NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTK--D 149 (327)
T ss_dssp CCEEEEEEEET----TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEES--S
T ss_pred CccEEEEEecC----CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEc--C
Confidence 44678888874 34444 445564433 22222 2332221 233457778777777655554 45544 332 3
Q ss_pred CCCEEEEe--ccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 018860 92 TGDVLHSF--EHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGG 169 (349)
Q Consensus 92 ~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~ 169 (349)
.|+.-... .....+..+++.+++.+++.+......+.+|-. ..............+..+.+.+++ .+++.+ .+|.
T Consensus 150 gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g-~~~~~~-~~G~ 226 (327)
T 2xbg_A 150 SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDG-RLWMIV-NGGK 226 (327)
T ss_dssp TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTS-CEEEEE-TTTE
T ss_pred CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCCCCCCccceeEECCCC-CEEEEe-CCce
Confidence 35433333 234568899999998888776554444445421 111111112234567788877655 444333 4577
Q ss_pred EEEEECCCCceEEeec-----CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEc----CCCceEEeeecCCCC
Q 018860 170 VRLWDVRSGEIVQTLE-----TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYN----MPCTIESASLEPKYG 240 (349)
Q Consensus 170 v~vwd~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~ 240 (349)
+++++...++.-..+. ....+..+.+.+++.+++++.++.+ ++....++.-.... .+..+..+.+.+ +
T Consensus 227 ~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~--~ 303 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS--P 303 (327)
T ss_dssp EEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE--T
T ss_pred EEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC--C
Confidence 7776432233222222 1234778888888888888777766 44444332222222 233455666653 4
Q ss_pred CEEEEecCCCeEEEEeC
Q 018860 241 NKFVAGGEDMWVRFFDF 257 (349)
Q Consensus 241 ~~~~~~~~d~~i~v~d~ 257 (349)
..+++++.+|.|..++-
T Consensus 304 ~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 304 DQGFILGQKGILLRYVT 320 (327)
T ss_dssp TEEEEECSTTEEEEECC
T ss_pred CceEEEcCCceEEEEcC
Confidence 56778888998877653
No 285
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.03 E-value=0.00032 Score=68.60 Aligned_cols=192 Identities=9% Similarity=0.036 Sum_probs=106.8
Q ss_pred CeEEEEEC-CCCCeeEEe-eCC----CeEEEEECCCC-CEEEEeccCCeEEEEEEcCCCCEEEEEeCC-----CeEEEEE
Q 018860 63 AVWSCCLD-TNALRAASA-SAD----FSAKVWDALTG-DVLHSFEHKHIVRACSFSEDTHLLLTGGME-----KILRIFD 130 (349)
Q Consensus 63 ~v~~~~~~-~~~~~l~s~-s~D----~~i~vWd~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----~~i~lwd 130 (349)
.+...+|+ |||++||-+ +.+ ..|+++|+.++ +.+.. .-......++|+|||+.|+-...| ..|.+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 57788999 999987733 222 35999999988 63211 001123467899999888776654 2577777
Q ss_pred CCCCCCCCcee-c-cCCCCeEEEEEecCCCeEEEEeeC--CCeEEEEECCCC--ce-EEee-cC-CCCeeEEEEcCCCcE
Q 018860 131 LNRPDAPPREV-D-RSPGSVRTVAWLHSDQTILSTCTD--MGGVRLWDVRSG--EI-VQTL-ET-KSPVTSAEVSQDGRY 201 (349)
Q Consensus 131 ~~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~~l~~~~~--dg~v~vwd~~~~--~~-~~~~-~~-~~~v~~~~~~~~~~~ 201 (349)
+.+.......+ . ........+.|++++..++.+... ...|.++|+.++ +. +..+ .. ......+.++..+.+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 76543221122 1 222345678899888777766543 346888998775 22 0222 22 223344544444555
Q ss_pred EEEec-C----CeEEEEecCCc-eeeE-EEcCCC--ceEEeeecCCCCCEEEEecCCCe--EEEEeC
Q 018860 202 ITTAD-G----STVKFWDANHF-GLVK-SYNMPC--TIESASLEPKYGNKFVAGGEDMW--VRFFDF 257 (349)
Q Consensus 202 l~~~~-d----~~i~iwd~~~~-~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~--i~v~d~ 257 (349)
+..+. + ..|..+|+.+. .... .+.... .+..+.+ ..+..+++...++. |+++++
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEec
Confidence 44443 2 25666776642 2122 232222 2333333 33445566666774 556665
No 286
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.03 E-value=0.0054 Score=53.10 Aligned_cols=217 Identities=10% Similarity=-0.008 Sum_probs=132.3
Q ss_pred CeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEE-EEEeCCCeEEEEECCCC---CCCCceeccCCCCeEEEEEecCCC
Q 018860 83 FSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLL-LTGGMEKILRIFDLNRP---DAPPREVDRSPGSVRTVAWLHSDQ 158 (349)
Q Consensus 83 ~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~d~~i~lwd~~~~---~~~~~~~~~~~~~i~~~~~~~~~~ 158 (349)
..|+..++.+.+....+........++|.+.+..| .+-...+.|..+++... ......+.........+++.+.++
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 45888898887666555555567899999865544 45556788999998641 111111221223446777776677
Q ss_pred eEEEEeeCCCeEEEEECCCCceEEeec-CCCCeeEEEEcCCCcEE-EEec-C-CeEEEEecCCceeeEEEcC-CCceEEe
Q 018860 159 TILSTCTDMGGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDGRYI-TTAD-G-STVKFWDANHFGLVKSYNM-PCTIESA 233 (349)
Q Consensus 159 ~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l-~~~~-d-~~i~iwd~~~~~~~~~~~~-~~~~~~~ 233 (349)
.+..+-...+.|.+.|+........+. .......+++.|.+..| .+.. . +.|...++........... -..+..+
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gl 169 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGI 169 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEE
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEE
Confidence 777776667899999987544332232 22345788999865543 3332 2 6788888764332222221 2345688
Q ss_pred eecCCCCCEEEEecCCCeEEEEeCCCCcEEEEec--CCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 234 SLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK--GHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 234 ~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
++++..+..+++-+..+.|..+|+.......... ..-.....+++. .+..+++-...+.|..++..
T Consensus 170 a~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 170 TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCC
Confidence 8888666667777788899999987533322222 122345678884 45555666667778887753
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.01 E-value=0.014 Score=57.11 Aligned_cols=217 Identities=10% Similarity=0.013 Sum_probs=131.4
Q ss_pred CCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCCC---CCceeccCCCCeEEEEEecC
Q 018860 81 ADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTH-LLLTGGMEKILRIFDLNRPDA---PPREVDRSPGSVRTVAWLHS 156 (349)
Q Consensus 81 ~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~d~~i~lwd~~~~~~---~~~~~~~~~~~i~~~~~~~~ 156 (349)
....|+..++........+.....+.+++|.+... ++++-...+.|+.+++..... ....+.........+++.+.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 34568888887666555555556678999998544 445555678888888864211 11122222344566777777
Q ss_pred CCeEEEEeeCCCeEEEEECCCCceEEeec-CCCCeeEEEEcCCCcEE-EEe-c-CCeEEEEecCCceeeEEEcCC-CceE
Q 018860 157 DQTILSTCTDMGGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDGRYI-TTA-D-GSTVKFWDANHFGLVKSYNMP-CTIE 231 (349)
Q Consensus 157 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l-~~~-~-d~~i~iwd~~~~~~~~~~~~~-~~~~ 231 (349)
++.++.+-...+.|.+.++........+. .......+++.|.+.+| .+- . .+.|...++............ ..+.
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~ 561 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 561 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCce
Confidence 77888777777899999987544332232 22346789999875444 332 2 367888888765443333322 3467
Q ss_pred EeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecC--CCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 232 SASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKG--HHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~--h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
.+++.+..++++++-...+.|..+++........+.. .-....+|++.. +.++++-...+.|...+
T Consensus 562 GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 562 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSAN 629 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEe
Confidence 8888877666677777788999999875544333332 122344666632 33344555556666655
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.99 E-value=0.0032 Score=54.87 Aligned_cols=192 Identities=10% Similarity=0.163 Sum_probs=110.9
Q ss_pred CCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCC----CC---EEEEEe-C--CCeEEEEECCCCCCCCceec
Q 018860 73 ALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSED----TH---LLLTGG-M--EKILRIFDLNRPDAPPREVD 142 (349)
Q Consensus 73 ~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~----~~---~l~s~~-~--d~~i~lwd~~~~~~~~~~~~ 142 (349)
..+++....++-+.++|+ +|+.+..+.. ..++.+.+-|+ |+ ++++.. . +.++++|+++..........
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 334566666778999999 7888888754 34555554442 22 223333 3 57899998753222222221
Q ss_pred c------CC-CCeEEEEE--ecCCC-eEEEEeeCCCeEEEEECC-------CCceEEeecCCCCeeEEEEcCCCcEE-EE
Q 018860 143 R------SP-GSVRTVAW--LHSDQ-TILSTCTDMGGVRLWDVR-------SGEIVQTLETKSPVTSAEVSQDGRYI-TT 204 (349)
Q Consensus 143 ~------~~-~~i~~~~~--~~~~~-~~l~~~~~dg~v~vwd~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l-~~ 204 (349)
. .. ..+.-++. .+..+ .++.....+|.+..|++. +.+.+.++...+.+..+.+.+....| ++
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEe
Confidence 1 11 33444444 44444 345555666999999882 34567777777777777787765555 44
Q ss_pred ecCCeEEEEecC-----CceeeEEEcCC---CceEEeeecCC-CCC-EEE-EecCCCeEEEEeCC-CCcEEEEe
Q 018860 205 ADGSTVKFWDAN-----HFGLVKSYNMP---CTIESASLEPK-YGN-KFV-AGGEDMWVRFFDFH-TGNEIACN 266 (349)
Q Consensus 205 ~~d~~i~iwd~~-----~~~~~~~~~~~---~~~~~~~~~~~-~~~-~~~-~~~~d~~i~v~d~~-~~~~~~~~ 266 (349)
-.+..|..++.. +...+...... ..+..+++.+. +++ +++ ++-.+++..+||.. +.+.+..+
T Consensus 198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 556666666754 23445444322 34566666422 233 444 45467899999996 55555444
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.88 E-value=0.01 Score=51.41 Aligned_cols=223 Identities=8% Similarity=-0.110 Sum_probs=132.6
Q ss_pred CCeEEEeCCCCC--eEEEeecccCCeEEEEECCC-CCeeEEeeCCCeEEEEECCCCCEE-EEe-ccCCeEEEEEEcCC-C
Q 018860 41 SSPMLRNGETGD--WIGTFEGHKGAVWSCCLDTN-ALRAASASADFSAKVWDALTGDVL-HSF-EHKHIVRACSFSED-T 114 (349)
Q Consensus 41 ~~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~vWd~~~~~~~-~~~-~~~~~v~~~~~s~~-~ 114 (349)
..|+..+..... ....+.+- ....++.|++. +...++-...+.|..++..++... ..+ ..-.....+++.+. +
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~-~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGL-EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEE-EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred CeEEEEECCCCceEEEEEecCC-CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 567777776542 22223222 23567889875 445556567788999998766321 111 11234567888874 5
Q ss_pred CEEEEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEee-CCCeEEEEECCCCceEEeecC-CCCeeE
Q 018860 115 HLLLTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCT-DMGGVRLWDVRSGEIVQTLET-KSPVTS 192 (349)
Q Consensus 115 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~-~~~v~~ 192 (349)
++.++-...+.|.+++++.... .............+++.|.++.++.+-. ..+.|...++........+.. -...+.
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Png 170 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 170 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred eEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccE
Confidence 5555656678899999864321 1112233345788888887777776653 357888888753322222221 234578
Q ss_pred EEEcCCCcEEEEe--cCCeEEEEecCCceeeEEEc-CCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEec
Q 018860 193 AEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYN-MPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK 267 (349)
Q Consensus 193 ~~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~ 267 (349)
+++++++..|.-+ ..+.|..+|+.......... ....+..+++. .+..+.+-...+.|..++..+++....+.
T Consensus 171 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 9999866554433 46789999987533222222 12234555654 24566676778899999987777655443
No 290
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.79 E-value=0.027 Score=53.65 Aligned_cols=226 Identities=8% Similarity=-0.089 Sum_probs=137.9
Q ss_pred EEEEEecCCCeEEEeCCCCCeEEEee-cccCCeEEEEECCCCCe-eEEeeCCCeEEEEECCCCCEEEEeccC-CeEEEEE
Q 018860 33 FLISASKDSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDTNALR-AASASADFSAKVWDALTGDVLHSFEHK-HIVRACS 109 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~-l~s~s~D~~i~vWd~~~~~~~~~~~~~-~~v~~~~ 109 (349)
+|+-+ ....|+..++++......+. ..-.....++|++.... .++-..++.|+.+++........+... .....++
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlA 86 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMA 86 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEE
Confidence 44433 44677777777654433322 12235678999986554 455556889999998765544444322 3466788
Q ss_pred EcCCCCEE-EEEeCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEe-eCCCeEEEEECCCCceEEeecCC
Q 018860 110 FSEDTHLL-LTGGMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTC-TDMGGVRLWDVRSGEIVQTLETK 187 (349)
Q Consensus 110 ~s~~~~~l-~s~~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~ 187 (349)
+.+.+..| .+-...+.|.+.+++.... .......-.....+++.|..+.++.+- +..+.|...++........+...
T Consensus 87 vD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~ 165 (628)
T 4a0p_A 87 VDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNV 165 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSC
T ss_pred EEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCC
Confidence 88765544 5555678899999864321 112223345678899988788877765 33568888887644333333333
Q ss_pred CCeeEEEEcCCCcEEEEe--cCCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcE
Q 018860 188 SPVTSAEVSQDGRYITTA--DGSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE 262 (349)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~ 262 (349)
...+.+++.+++..|.-+ ..+.|...|+...........-..+..+++.. +..+++-...+.|...|..+++.
T Consensus 166 ~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 166 GRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCS
T ss_pred CCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEECCCCCc
Confidence 456788999876555433 46789999986543321112222345666653 55666666788999999776654
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.69 E-value=0.00093 Score=64.67 Aligned_cols=217 Identities=10% Similarity=0.001 Sum_probs=125.1
Q ss_pred CCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEE-eCCCeEEEEECCCC---CCCCceeccCCCCeEEEEEecCC
Q 018860 82 DFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTG-GMEKILRIFDLNRP---DAPPREVDRSPGSVRTVAWLHSD 157 (349)
Q Consensus 82 D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~d~~i~lwd~~~~---~~~~~~~~~~~~~i~~~~~~~~~ 157 (349)
...|+..++.+.+....+.....+..++|.+.+..|+.+ ...+.|+.+++... ......+.........+++.+.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 457888888776655554444456788999876666554 45678899988641 11111111111223445655556
Q ss_pred CeEEEEeeCCCeEEEEECCCCceEEeecC-CCCeeEEEEcCCCcEEEEec---CCeEEEEecCCceeeEEEcC-CCceEE
Q 018860 158 QTILSTCTDMGGVRLWDVRSGEIVQTLET-KSPVTSAEVSQDGRYITTAD---GSTVKFWDANHFGLVKSYNM-PCTIES 232 (349)
Q Consensus 158 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~---d~~i~iwd~~~~~~~~~~~~-~~~~~~ 232 (349)
+.++.+-...+.|.+.++........+.. ......+++.|.+.+|..++ .+.|..+++........... -..+..
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnG 544 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 544 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccE
Confidence 66666655668899999875543333322 23346778888654433322 26777777654322211111 123456
Q ss_pred eeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEec--CCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 233 ASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNK--GHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~--~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
+++.+..++++++-+..+.|.++++........+. ..-.....|++..+ .++++-...+.|..++.
T Consensus 545 lavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 545 ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp EEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred EEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 88888767788888888999999986543332222 11223445666443 44556666778888875
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.66 E-value=0.025 Score=49.30 Aligned_cols=198 Identities=15% Similarity=0.273 Sum_probs=119.7
Q ss_pred eEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECC----CCCe----eEEeeC--CCeEEEEEC
Q 018860 21 DLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDT----NALR----AASASA--DFSAKVWDA 90 (349)
Q Consensus 21 ~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~----~~~~----l~s~s~--D~~i~vWd~ 90 (349)
++=.+|.+|....++.....+-+.+||. +++.++.+.. +.+.-|.+-+ .++. ++|.-. +.+|++|++
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 3434566666677777778888999999 7888888864 3444444433 2322 333334 578999976
Q ss_pred --CCCCEEEEecc---C-----CeEEEEEE--cCC-CC-EEEEEeCCCeEEEEECCCCCC------CCceeccCCCCeEE
Q 018860 91 --LTGDVLHSFEH---K-----HIVRACSF--SED-TH-LLLTGGMEKILRIFDLNRPDA------PPREVDRSPGSVRT 150 (349)
Q Consensus 91 --~~~~~~~~~~~---~-----~~v~~~~~--s~~-~~-~l~s~~~d~~i~lwd~~~~~~------~~~~~~~~~~~i~~ 150 (349)
.+++ +..+.. + ..+..+++ +|. +. +++....++.+..|++..... ..+.+. ..+.+-.
T Consensus 107 Dp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~Eg 184 (355)
T 3amr_A 107 DGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEG 184 (355)
T ss_dssp CTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEE
T ss_pred CCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcce
Confidence 3443 444421 1 34566777 664 43 677788889999999843211 112222 2346777
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECC-----CCceEEeecCC---CCeeEEEEc--CCCc-EE-EEe-cCCeEEEEecC-
Q 018860 151 VAWLHSDQTILSTCTDMGGVRLWDVR-----SGEIVQTLETK---SPVTSAEVS--QDGR-YI-TTA-DGSTVKFWDAN- 216 (349)
Q Consensus 151 ~~~~~~~~~~l~~~~~dg~v~vwd~~-----~~~~~~~~~~~---~~v~~~~~~--~~~~-~l-~~~-~d~~i~iwd~~- 216 (349)
|...+..+.++++-- +..|..+|.+ +++.+..+... ..+..+.+. ++++ +| +++ .++++.+||..
T Consensus 185 cvvDd~~g~Lyv~eE-d~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 185 MAADDEYGRLYIAEE-DEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EEEETTTTEEEEEET-TTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred EEEcCCCCeEEEecc-cceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 777776777765544 4557777754 34555555332 356677764 4444 44 444 37899999986
Q ss_pred CceeeEEE
Q 018860 217 HFGLVKSY 224 (349)
Q Consensus 217 ~~~~~~~~ 224 (349)
+.+.+..+
T Consensus 264 ~~~~vg~f 271 (355)
T 3amr_A 264 KNKYVADF 271 (355)
T ss_dssp TCCEEEEE
T ss_pred CCcEEEEE
Confidence 55555444
No 293
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.57 E-value=0.025 Score=47.12 Aligned_cols=198 Identities=11% Similarity=0.124 Sum_probs=125.9
Q ss_pred EeecccCCeEEEEECCCCCeeE-EeeCCCeEEEEECCCCCEEEEeccC--CeEEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 018860 56 TFEGHKGAVWSCCLDTNALRAA-SASADFSAKVWDALTGDVLHSFEHK--HIVRACSFSEDTHLLLTGGMEKILRIFDLN 132 (349)
Q Consensus 56 ~~~~h~~~v~~~~~~~~~~~l~-s~s~D~~i~vWd~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~ 132 (349)
.+.|=...+..+++++++..|+ ....++.|...|.. ++.++.+... .-...+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3445556799999998766555 46678889999987 8888877533 346788888888877776567788888876
Q ss_pred CCCCCC--cee------ccCCCCeEEEEEecCCCeEEEEeeCCC-eEEEEEC-CCCceEEeec--------CCCCeeEEE
Q 018860 133 RPDAPP--REV------DRSPGSVRTVAWLHSDQTILSTCTDMG-GVRLWDV-RSGEIVQTLE--------TKSPVTSAE 194 (349)
Q Consensus 133 ~~~~~~--~~~------~~~~~~i~~~~~~~~~~~~l~~~~~dg-~v~vwd~-~~~~~~~~~~--------~~~~v~~~~ 194 (349)
...... ... .......-.++|.+.++.++++...+. .|..|+- .....+..+. .......+.
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 543200 111 112334688999998888877666543 5555651 1111112111 123467888
Q ss_pred EcCCC-cEEEEe-cCCeEEEEecCCceeeEEEcCC----------CceEEeeecCCCCCEEEEecCCCeEEEEeC
Q 018860 195 VSQDG-RYITTA-DGSTVKFWDANHFGLVKSYNMP----------CTIESASLEPKYGNKFVAGGEDMWVRFFDF 257 (349)
Q Consensus 195 ~~~~~-~~l~~~-~d~~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~ 257 (349)
+.|.. ++++.+ .++.+..+|.... .+..+... .+...+++.+. ++.+++ ++-+.+++|.-
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~-G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDAS-GNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTT-CCEEEE-ETTTEEEEEEC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCC-CCEEEE-cCCceEEEEEe
Confidence 98864 555555 4688899997644 55555443 25688899884 665555 66667776653
No 294
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.55 E-value=0.014 Score=49.74 Aligned_cols=227 Identities=10% Similarity=0.063 Sum_probs=109.5
Q ss_pred CccEEEEEe-cC-----CCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCC-----CeEEEEECCCCC---E
Q 018860 30 DGFFLISAS-KD-----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASAD-----FSAKVWDALTGD---V 95 (349)
Q Consensus 30 ~~~~l~s~s-~d-----~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vWd~~~~~---~ 95 (349)
++..++.|+ .+ ..+.++|..+.++...-..........+...++..++.||.+ ..+.++|..+.+ -
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 345666666 33 357788888776643211111111111122356667777755 358899987765 2
Q ss_pred EEE--eccCCeEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCC-
Q 018860 96 LHS--FEHKHIVRACSFSEDTHLLLTGGME-----KILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDM- 167 (349)
Q Consensus 96 ~~~--~~~~~~v~~~~~s~~~~~l~s~~~d-----~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~d- 167 (349)
... +..+..-.+++. .++.+++.|+.+ ..+.+||+.+...........+..-.++... ++.+++.|+.+
T Consensus 94 ~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 170 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDG 170 (301)
T ss_dssp EEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCC
Confidence 222 111111111111 256677777643 3577888765432111100111111122222 34555555432
Q ss_pred ----CeEEEEECCCCceEEeecCCC--CeeEEEEcCCCcEE-EEecC-----CeEEEEecCCceeeEEEcCCCce--EEe
Q 018860 168 ----GGVRLWDVRSGEIVQTLETKS--PVTSAEVSQDGRYI-TTADG-----STVKFWDANHFGLVKSYNMPCTI--ESA 233 (349)
Q Consensus 168 ----g~v~vwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~--~~~ 233 (349)
..+.+||+.+.+....-.... .-.++... +++++ .++.+ ..+.+||+.+..-...-..+... ..+
T Consensus 171 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 249 (301)
T 2vpj_A 171 LNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGA 249 (301)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred CcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeE
Confidence 468999999887654322211 11222223 44444 44432 46889999876544332232211 122
Q ss_pred eecCCCCCEEEEecCC-----CeEEEEeCCCCcE
Q 018860 234 SLEPKYGNKFVAGGED-----MWVRFFDFHTGNE 262 (349)
Q Consensus 234 ~~~~~~~~~~~~~~~d-----~~i~v~d~~~~~~ 262 (349)
... ++..++.|+.+ ..+.+||..+.+-
T Consensus 250 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 250 TVL--RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp EEE--TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred EEE--CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 222 35667777755 4677888776543
No 295
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.54 E-value=0.064 Score=51.01 Aligned_cols=217 Identities=10% Similarity=0.003 Sum_probs=121.5
Q ss_pred CCeEEEEECCCCC--EEEEeccCCeEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCC
Q 018860 82 DFSAKVWDALTGD--VLHSFEHKHIVRACSFSEDTHLLLTG-GMEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQ 158 (349)
Q Consensus 82 D~~i~vWd~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~-~~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 158 (349)
...|+.-++.... .......-.....++|++.+..|+-+ ...+.|..++++........+.........+++.+.++
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 4567888876542 22223334457889999866666544 45678888888643211122222224677888887778
Q ss_pred eEEEEeeCCCeEEEEECCCCceEEee-cCCCCeeEEEEcCCCcEE-EEec--CCeEEEEecCCceeeEEEc-CCCceEEe
Q 018860 159 TILSTCTDMGGVRLWDVRSGEIVQTL-ETKSPVTSAEVSQDGRYI-TTAD--GSTVKFWDANHFGLVKSYN-MPCTIESA 233 (349)
Q Consensus 159 ~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l-~~~~--d~~i~iwd~~~~~~~~~~~-~~~~~~~~ 233 (349)
.+..+-...+.|.+.++........+ ........+++.|.+..| .+-. ...|...++.......... .-..+..+
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 88888777789999998754332222 222334678888864443 4432 3566666665433222222 12346778
Q ss_pred eecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 234 SLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 234 ~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
++.+..++.+++-+..+.|..+|+..........+.-.....|++..+ ...++-...+.|...|.
T Consensus 177 ald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 177 TLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp EEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEES
T ss_pred EEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEEC
Confidence 888866666777778889999998654433222212222346677544 34445555666776665
No 296
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.50 E-value=0.029 Score=48.39 Aligned_cols=151 Identities=9% Similarity=0.106 Sum_probs=102.6
Q ss_pred EEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEe-ecC----CC---CeeEEEE---cCCCcEEEEec-----------
Q 018860 149 RTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQT-LET----KS---PVTSAEV---SQDGRYITTAD----------- 206 (349)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~-~~~----~~---~v~~~~~---~~~~~~l~~~~----------- 206 (349)
-+..|.+.++.++++....++|..||...+..... +.. .. ....+.+ .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 45778888888888877779999999976644332 322 11 2467888 58888877543
Q ss_pred ---CCeEEEEecC---CceeeEEEcCC--------------CceEEeeecCCCCCEEEEecCC-CeEEEEeCCCCcEEEE
Q 018860 207 ---GSTVKFWDAN---HFGLVKSYNMP--------------CTIESASLEPKYGNKFVAGGED-MWVRFFDFHTGNEIAC 265 (349)
Q Consensus 207 ---d~~i~iwd~~---~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~d-~~i~v~d~~~~~~~~~ 265 (349)
+..|..||+. +.+.+.....+ .....++..+ +++.+++++.- +.|..++.........
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 4679999998 66665544432 1356777776 48888888877 8888877654322222
Q ss_pred ecC-----CCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 266 NKG-----HHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 266 ~~~-----h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
... .....+.++++|++..|+....+|.|.-+|+.
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 111 11235689999999988766559999999865
No 297
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.47 E-value=0.036 Score=48.68 Aligned_cols=219 Identities=9% Similarity=0.043 Sum_probs=110.9
Q ss_pred eEEEEECCCCCeeEEeeCCCeEEEEECCCCCE--EEEec----cCCeEEEEEEcCC---CCEEE-EEeCC-----CeEEE
Q 018860 64 VWSCCLDTNALRAASASADFSAKVWDALTGDV--LHSFE----HKHIVRACSFSED---THLLL-TGGME-----KILRI 128 (349)
Q Consensus 64 v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~--~~~~~----~~~~v~~~~~s~~---~~~l~-s~~~d-----~~i~l 128 (349)
-+.++|.+++.+++ +..++.|++++ .++. +..+. .......++|+|+ +..|. +-... ..|..
T Consensus 33 P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 33 PWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp EEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 46899999998555 45679999998 3432 22121 1345789999998 44444 43322 55666
Q ss_pred EECCCCCC--CCce---ec---cCCCCeEEEEEecCCCeEEEEeeC------------CCeEEEEECCCCce--------
Q 018860 129 FDLNRPDA--PPRE---VD---RSPGSVRTVAWLHSDQTILSTCTD------------MGGVRLWDVRSGEI-------- 180 (349)
Q Consensus 129 wd~~~~~~--~~~~---~~---~~~~~i~~~~~~~~~~~~l~~~~~------------dg~v~vwd~~~~~~-------- 180 (349)
|++..... .... +. ........++|.|++..+++.+.. .|.|..+|... +.
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~npf~~ 188 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-EPAPGNPFLG 188 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCTTTT
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-CCCCCCcccC
Confidence 77653210 0001 11 111123567887766444443321 14666666542 11
Q ss_pred -----EEee-cCCCCeeEEEEcC-CCcEEEEec--CC-------eEEEEecCC----------------ceeeEEEcCCC
Q 018860 181 -----VQTL-ETKSPVTSAEVSQ-DGRYITTAD--GS-------TVKFWDANH----------------FGLVKSYNMPC 228 (349)
Q Consensus 181 -----~~~~-~~~~~v~~~~~~~-~~~~l~~~~--d~-------~i~iwd~~~----------------~~~~~~~~~~~ 228 (349)
...+ ........+++.| ++.+.++-. +. .|.+..... ..++..+....
T Consensus 189 ~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ 268 (352)
T 2ism_A 189 RRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGF 268 (352)
T ss_dssp CTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCC
T ss_pred CCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCC
Confidence 0001 1112245678888 666665532 22 233332211 01112221112
Q ss_pred ceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcE------EEEecCCCcceeEEEEccCCCeEEEe
Q 018860 229 TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNE------IACNKGHHGPVHCVRFSPGGESYASG 288 (349)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~------~~~~~~h~~~i~~l~~sp~~~~l~sg 288 (349)
.+..+++. .+..+++.-..+.|...++..... ...+..-...+..+++.|+|.++++.
T Consensus 269 ap~G~~~~--~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 269 PPGNLAFF--RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp CEEEEEEE--TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CCcceEEE--CCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 23445552 356666666777888887754321 11111223578899999999766554
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.47 E-value=0.0017 Score=62.87 Aligned_cols=204 Identities=13% Similarity=-0.061 Sum_probs=112.4
Q ss_pred eeeEEEeecCCCccEEEEEecCCCeEEEeCCC----CCeEEEeecccCCeEEEEECC-CCCeeEEeeCCCeEEEEECCCC
Q 018860 19 VVDLFYSPITPDGFFLISASKDSSPMLRNGET----GDWIGTFEGHKGAVWSCCLDT-NALRAASASADFSAKVWDALTG 93 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~----~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vWd~~~~ 93 (349)
+..++|++ .++.+.++-...+.|..++... ......+...-.....+++++ .+.++++-...+.|.+.++.+.
T Consensus 408 p~gla~d~--~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 408 VVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp CCCCEEET--TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred eEEEcccc--ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 45677775 1333444444556787777654 122222211112234578875 4455555566788999998765
Q ss_pred CEEEEecc-CCeEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 018860 94 DVLHSFEH-KHIVRACSFSEDTHLLLTGGM--EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGV 170 (349)
Q Consensus 94 ~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v 170 (349)
.....+.. ....+.+++.|.+.+|+.+.. .+.|..++++.... .............++|.+.++.++.+-...+.|
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 54443332 234577889986554444332 26677776643221 111111223456788888878777777777899
Q ss_pred EEEECCCCceEEeecC---CCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEc
Q 018860 171 RLWDVRSGEIVQTLET---KSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYN 225 (349)
Q Consensus 171 ~vwd~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~ 225 (349)
.++|+........+.. ......+.+..+..+++....+.|..+|..+++.+..+.
T Consensus 565 ~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 565 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 9999864322222211 111223445444333444456788888887776665553
No 299
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.39 E-value=0.014 Score=53.68 Aligned_cols=150 Identities=15% Similarity=0.166 Sum_probs=95.6
Q ss_pred CeEEEEEecC-CCeEEEEeeCCCeEEEEECCCCceEEeecCC----CCeeEEEE-------cCCCcEEEEe-cCC-----
Q 018860 147 SVRTVAWLHS-DQTILSTCTDMGGVRLWDVRSGEIVQTLETK----SPVTSAEV-------SQDGRYITTA-DGS----- 208 (349)
Q Consensus 147 ~i~~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~----~~v~~~~~-------~~~~~~l~~~-~d~----- 208 (349)
....++|.|. ++.++++....+.|++.|+.++......... .....++| ++++..|..+ ..+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4667888873 5666666655578999999887765544332 23678899 9999855443 322
Q ss_pred --eEEEEecCC-ce--------eeEEEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCC-------CCcE--------
Q 018860 209 --TVKFWDANH-FG--------LVKSYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFH-------TGNE-------- 262 (349)
Q Consensus 209 --~i~iwd~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~-------~~~~-------- 262 (349)
.|.+++... +. .+..+. ....++++|..+.++++-..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~---~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK---QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES---CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred CceEEEEecCCCCceeecccceeeccCC---CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 255665333 11 122222 234567788767778888889999999987 4443
Q ss_pred ---EEE-e-cCCCcceeEEEEccCCCe-EEEecCCCCEEEecC
Q 018860 263 ---IAC-N-KGHHGPVHCVRFSPGGES-YASGSEDGTIRIWQT 299 (349)
Q Consensus 263 ---~~~-~-~~h~~~i~~l~~sp~~~~-l~sgs~Dg~v~vW~~ 299 (349)
+.. . .+...+...++|+|++++ .++=+..+.|+.++.
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 111 1 122345679999999995 445566777888654
No 300
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.34 E-value=0.048 Score=46.43 Aligned_cols=211 Identities=14% Similarity=0.090 Sum_probs=100.5
Q ss_pred eEEEEECCCCCEEEE--eccCCeEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCCC-CceeccCCC--CeEEEEE
Q 018860 84 SAKVWDALTGDVLHS--FEHKHIVRACSFSEDTHLLLTGGME-----KILRIFDLNRPDAP-PREVDRSPG--SVRTVAW 153 (349)
Q Consensus 84 ~i~vWd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d-----~~i~lwd~~~~~~~-~~~~~~~~~--~i~~~~~ 153 (349)
.+.++|..+.+-... +..+..-.+++ ..++.+++.||.+ ..+.+||+.+.... ...+...+. .-.++..
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 577888776542221 11111111111 2256677777754 35788888665410 111111111 1112222
Q ss_pred ecCCCeEEEEeeCC-----CeEEEEECCCCceEEeecC--CCCeeEEEEcCCCcEE-EEecC-----CeEEEEecCCcee
Q 018860 154 LHSDQTILSTCTDM-----GGVRLWDVRSGEIVQTLET--KSPVTSAEVSQDGRYI-TTADG-----STVKFWDANHFGL 220 (349)
Q Consensus 154 ~~~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l-~~~~d-----~~i~iwd~~~~~~ 220 (349)
. ++.+++.|+.+ ..+.+||+.+.+....-.. ...-.++... +++++ .++.+ ..+..||+.+..-
T Consensus 111 ~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W 187 (301)
T 2vpj_A 111 L--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHW 187 (301)
T ss_dssp E--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred E--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcE
Confidence 2 44555555432 3689999988876543222 1111222222 45544 44432 4588899877654
Q ss_pred eEEEcCCCce--EEeeecCCCCCEEEEecCC-----CeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCC-
Q 018860 221 VKSYNMPCTI--ESASLEPKYGNKFVAGGED-----MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDG- 292 (349)
Q Consensus 221 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d-----~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg- 292 (349)
...-..+... ..+... ++..++.|+.+ ..+.+||..+.+-...-..........+...+++.++.|+.++
T Consensus 188 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 265 (301)
T 2vpj_A 188 TNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGN 265 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred EeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCC
Confidence 3332222221 122222 35677777754 4689999987664332211111111112223666777777653
Q ss_pred ----CEEEecCC
Q 018860 293 ----TIRIWQTG 300 (349)
Q Consensus 293 ----~v~vW~~~ 300 (349)
.+.+||+.
T Consensus 266 ~~~~~v~~yd~~ 277 (301)
T 2vpj_A 266 SLLSSIECYDPI 277 (301)
T ss_dssp SBEEEEEEEETT
T ss_pred cccccEEEEcCC
Confidence 35556653
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.24 E-value=0.048 Score=46.58 Aligned_cols=220 Identities=8% Similarity=0.051 Sum_probs=107.7
Q ss_pred cEEEEEecC--CCeEEEeCCCCCeEEEe--ecccCCeEEEEECCCCCeeEEeeCC----CeEEEEECCCCCEEEE--ecc
Q 018860 32 FFLISASKD--SSPMLRNGETGDWIGTF--EGHKGAVWSCCLDTNALRAASASAD----FSAKVWDALTGDVLHS--FEH 101 (349)
Q Consensus 32 ~~l~s~s~d--~~i~iw~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~l~s~s~D----~~i~vWd~~~~~~~~~--~~~ 101 (349)
..++.|+.+ ..+..||..+.++...- ......-.++. .++..++.||.+ ..+.++|..+.+-... +..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 344555543 46778888877664321 11111111222 356667777755 6688889887643222 111
Q ss_pred CCe-EEEEEEcCCCCEEEEEeCC------CeEEEEECCCCCCCCceeccCCC--CeEEEEEecCCCeEEEEeeC------
Q 018860 102 KHI-VRACSFSEDTHLLLTGGME------KILRIFDLNRPDAPPREVDRSPG--SVRTVAWLHSDQTILSTCTD------ 166 (349)
Q Consensus 102 ~~~-v~~~~~s~~~~~l~s~~~d------~~i~lwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~l~~~~~------ 166 (349)
+.. -.++.+ ++.+++.||.+ ..+.+||+.+.... .+...+. .-.++... ++.+++.|+.
T Consensus 91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~--~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH--TKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVS 164 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE--EECCCSSCCBSCEEEEE--TTEEEEECCEESCTTT
T ss_pred cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE--eCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCc
Confidence 111 112222 66677777755 45778887654321 1111111 11122222 3445444432
Q ss_pred ---CCeEEEEECCCCceEEeecCC--CCeeEEEEcCCCcEE-EEecC-----CeEEEEecCCceeeEEEcCCCc--eEEe
Q 018860 167 ---MGGVRLWDVRSGEIVQTLETK--SPVTSAEVSQDGRYI-TTADG-----STVKFWDANHFGLVKSYNMPCT--IESA 233 (349)
Q Consensus 167 ---dg~v~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l-~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~~~~ 233 (349)
...+.+||+.+.+....-... ..-..+... +++++ .++.+ ..+.+||+.+..-...-..+.. ...+
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 356899999988765432221 111223333 44444 44322 4588899877543322222221 1122
Q ss_pred eecCCCCCEEEEecCC-----CeEEEEeCCCCcE
Q 018860 234 SLEPKYGNKFVAGGED-----MWVRFFDFHTGNE 262 (349)
Q Consensus 234 ~~~~~~~~~~~~~~~d-----~~i~v~d~~~~~~ 262 (349)
+.. ++..++.|+.+ ..+.+||..+.+-
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 222 35677777743 5678888876543
No 302
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.22 E-value=0.039 Score=47.04 Aligned_cols=222 Identities=12% Similarity=0.146 Sum_probs=105.1
Q ss_pred ccEEEEEecC----CCeEEEeCCCCCeEEE--eecccCCeEEEEECCCCCeeEEeeCCC-----eEEEEECCCCCEEEE-
Q 018860 31 GFFLISASKD----SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDTNALRAASASADF-----SAKVWDALTGDVLHS- 98 (349)
Q Consensus 31 ~~~l~s~s~d----~~i~iw~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vWd~~~~~~~~~- 98 (349)
+..++.|+.+ ..+..+|..+.++... +......-.++.+ ++..++.||.++ .+.++|..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4455556544 3467788777765432 1111111111222 566677777543 578888876642221
Q ss_pred -eccCCeEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCCCCCceeccCCC--CeEEEEEecCCCeEEEEeeC----
Q 018860 99 -FEHKHIVRACSFSEDTHLLLTGGMEK-----ILRIFDLNRPDAPPREVDRSPG--SVRTVAWLHSDQTILSTCTD---- 166 (349)
Q Consensus 99 -~~~~~~v~~~~~s~~~~~l~s~~~d~-----~i~lwd~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~l~~~~~---- 166 (349)
+..+..-.+++. .++.+++.||.++ .+.+||+.+.... .+...+. .-.++... ++.+++.|+.
T Consensus 94 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~--~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 94 NMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF--HVAPMNTRRSSVGVGVV--GGLLYAVGGYDVAS 168 (302)
T ss_dssp CCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEE--EECCCSSCCBSCEEEEE--TTEEEEECCEETTT
T ss_pred CCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEe--ecCCCCCcccCceEEEE--CCEEEEEeCCCCCC
Confidence 111111111111 2566777777553 4667787643321 1111111 11122222 3445444432
Q ss_pred ---CCeEEEEECCCCceEEeec--CCCCeeEEEEcCCCcE-EEEecC-----CeEEEEecCCceeeEEEcCCCce--EEe
Q 018860 167 ---MGGVRLWDVRSGEIVQTLE--TKSPVTSAEVSQDGRY-ITTADG-----STVKFWDANHFGLVKSYNMPCTI--ESA 233 (349)
Q Consensus 167 ---dg~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~-l~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~--~~~ 233 (349)
...+.+||+.+.+....-. ......++... ++++ +.++.+ ..+.+||+.+..-...-..+... ..+
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV 247 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeE
Confidence 2468999999887654322 11111223333 4444 444432 36889998776543332222211 112
Q ss_pred eecCCCCCEEEEecCCC-----eEEEEeCCCCcE
Q 018860 234 SLEPKYGNKFVAGGEDM-----WVRFFDFHTGNE 262 (349)
Q Consensus 234 ~~~~~~~~~~~~~~~d~-----~i~v~d~~~~~~ 262 (349)
+.. ++..++.|+.++ .+.+||..+.+-
T Consensus 248 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 248 CAV--NGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEE--CCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 221 356677777543 477788766543
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.19 E-value=0.16 Score=48.17 Aligned_cols=156 Identities=6% Similarity=-0.109 Sum_probs=87.0
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC-eEEEeecccCCeEEEEECCC-CCeeEEeeCCCeEEEEECCCCCE
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD-WIGTFEGHKGAVWSCCLDTN-ALRAASASADFSAKVWDALTGDV 95 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~-~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i~vWd~~~~~~ 95 (349)
.+..++|++ .++....+-...+.|..++..... ....+..--.....++++.. +...++-...+.|.+.+..+...
T Consensus 41 ~~~~ld~~~--~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 41 DAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CEEEEEEET--TTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred ceEEEEEEe--CCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 456888886 234444454455667777765442 12233332245778999985 44555666788999999876543
Q ss_pred EEEe-ccCCeEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEE
Q 018860 96 LHSF-EHKHIVRACSFSEDTHLLLTGGM--EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172 (349)
Q Consensus 96 ~~~~-~~~~~v~~~~~s~~~~~l~s~~~--d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~v 172 (349)
...+ ..-...+.+++.|.+..|+-... .+.|...+++.... .......-.....+++.+.++.+..+-...+.|..
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 3333 22344678899886554544432 45666666653221 11111222345667777666666555444456666
Q ss_pred EECC
Q 018860 173 WDVR 176 (349)
Q Consensus 173 wd~~ 176 (349)
.|+.
T Consensus 198 ~~~d 201 (619)
T 3s94_A 198 SNLD 201 (619)
T ss_dssp ESSS
T ss_pred ecCC
Confidence 6654
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.18 E-value=0.061 Score=46.41 Aligned_cols=162 Identities=10% Similarity=0.068 Sum_probs=104.2
Q ss_pred eeccCCCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEE-Eeec----ccC--CeEEEEE---CCCCCeeEEee
Q 018860 11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIG-TFEG----HKG--AVWSCCL---DTNALRAASAS 80 (349)
Q Consensus 11 ~~~gh~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~-~~~~----h~~--~v~~~~~---~~~~~~l~s~s 80 (349)
.+++..-..-+++|.+ .++.+.+|.-..++|..|+...+.... .+.+ ... .+..+.+ ++++++++...
T Consensus 7 ~~~~~~~yPE~~~wd~--~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~ 84 (334)
T 2p9w_A 7 DVKVKNLTPEDTIYDR--TRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMK 84 (334)
T ss_dssp EECCTTCCCSCEEEET--TTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEE
T ss_pred EecCcccCCcCccCcC--CCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEc
Confidence 3334444445788875 356677766689999999987554332 3332 111 2578899 68877666433
Q ss_pred -------------CCCeEEEEECC---CCCEEEEecc-------------C-CeEEEEEEcCCCCEEEEEeCC-CeEEEE
Q 018860 81 -------------ADFSAKVWDAL---TGDVLHSFEH-------------K-HIVRACSFSEDTHLLLTGGME-KILRIF 129 (349)
Q Consensus 81 -------------~D~~i~vWd~~---~~~~~~~~~~-------------~-~~v~~~~~s~~~~~l~s~~~d-~~i~lw 129 (349)
.+..|..+|+. +++.+....- . .....++..++|+.-++++.- +.|...
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARV 164 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEE
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEE
Confidence 26789999998 7766554431 1 247899999999998988877 766555
Q ss_pred ECCCCCCCCcee------ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCC
Q 018860 130 DLNRPDAPPREV------DRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS 177 (349)
Q Consensus 130 d~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 177 (349)
+.+.. ..... .......+-+++.|++..+++.-+ .|.+..+|++.
T Consensus 165 ~pdG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~ 215 (334)
T 2p9w_A 165 SADGK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSK 215 (334)
T ss_dssp CTTSC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSS
T ss_pred eCCCC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCC
Confidence 54322 11111 111123557888887777777666 79999999874
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.17 E-value=0.18 Score=48.03 Aligned_cols=157 Identities=6% Similarity=-0.111 Sum_probs=94.9
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCC-eeEEeeCCCeEEEEECCCCCE
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNAL-RAASASADFSAKVWDALTGDV 95 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vWd~~~~~~ 95 (349)
..+..|+|++ .++....+-..++.|..++.........+..-......++++..+. ..++-...+.|.+.++.+...
T Consensus 37 ~~~~~l~~d~--~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 37 KEASALDFDV--TDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp SCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred CceEEEEEEC--CCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence 3456899987 2455555666677888887765443333332223456788886544 455666678899999876543
Q ss_pred EEEe-ccCCeEEEEEEcCCCCEEEEEe--CCCeEEEEECCCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEE
Q 018860 96 LHSF-EHKHIVRACSFSEDTHLLLTGG--MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRL 172 (349)
Q Consensus 96 ~~~~-~~~~~v~~~~~s~~~~~l~s~~--~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~v 172 (349)
...+ ..-...+.+++.|....|.-.. ..+.|...+++... ...+...-.....+++.+.++.+..+-...+.|..
T Consensus 115 ~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~--~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 115 QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE--RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc--eEEEECCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 2222 2334568999998544454443 25677777775432 22222233456777777766666666555567777
Q ss_pred EECCC
Q 018860 173 WDVRS 177 (349)
Q Consensus 173 wd~~~ 177 (349)
.|+..
T Consensus 193 ~d~dG 197 (628)
T 4a0p_A 193 SNMLG 197 (628)
T ss_dssp EETTS
T ss_pred EcCCC
Confidence 77654
No 306
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.02 E-value=0.067 Score=45.78 Aligned_cols=223 Identities=13% Similarity=0.098 Sum_probs=106.3
Q ss_pred CccEEEEEecC----CCeEEEeCCCCCeEEEeecccCCe-EEEEECCCCCeeEEeeC----C-----CeEEEEECCCCCE
Q 018860 30 DGFFLISASKD----SSPMLRNGETGDWIGTFEGHKGAV-WSCCLDTNALRAASASA----D-----FSAKVWDALTGDV 95 (349)
Q Consensus 30 ~~~~l~s~s~d----~~i~iw~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~l~s~s~----D-----~~i~vWd~~~~~~ 95 (349)
++..++.|+.+ ..+.++|..+.++...-....... .+++. .++..++.||. + ..+.++|..+.+-
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 45666667642 356788888777643211111111 11222 25566666665 2 3578888876642
Q ss_pred EEEe--ccCC-eEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCCCCCc-eeccCCCCeEEEEEecCCCeEEEEeeC
Q 018860 96 LHSF--EHKH-IVRACSFSEDTHLLLTGGME-----KILRIFDLNRPDAPPR-EVDRSPGSVRTVAWLHSDQTILSTCTD 166 (349)
Q Consensus 96 ~~~~--~~~~-~v~~~~~s~~~~~l~s~~~d-----~~i~lwd~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~ 166 (349)
...- ..+. .-.++.+ ++.+++.|+.+ ..+.+||+.+...... .+........++. . ++.+++.|+.
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~--~~~iyv~GG~ 177 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV-L--NRLLYAVGGF 177 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-E--TTEEEEECCB
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE-E--CCEEEEEeCC
Confidence 2211 1111 1112222 56677777643 3577888765331110 1111111112222 2 3455555443
Q ss_pred C-----CeEEEEECCCCceEEeec--CCCCeeEEEEcCCCcEE-EEecC-----CeEEEEecCCceeeEEEcCCCce--E
Q 018860 167 M-----GGVRLWDVRSGEIVQTLE--TKSPVTSAEVSQDGRYI-TTADG-----STVKFWDANHFGLVKSYNMPCTI--E 231 (349)
Q Consensus 167 d-----g~v~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l-~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~--~ 231 (349)
+ ..+.+||+.+.+....-. ......++... +++++ .++.+ ..+.+||+.+..-...-..+... .
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 256 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSAL 256 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSC
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccce
Confidence 2 468999998887653322 11111222233 44444 44432 46889998776433322222211 1
Q ss_pred EeeecCCCCCEEEEecCC-----CeEEEEeCCCCc
Q 018860 232 SASLEPKYGNKFVAGGED-----MWVRFFDFHTGN 261 (349)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d-----~~i~v~d~~~~~ 261 (349)
.+... ++..++.|+.+ ..+.+||..+.+
T Consensus 257 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 257 GITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 22222 35667777643 456777776654
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.01 E-value=0.13 Score=43.72 Aligned_cols=181 Identities=14% Similarity=0.170 Sum_probs=87.3
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCCCCCc-eeccCCCCeEEEEEecCCCeEEEEeeCC-----CeEEEEECCCCceE
Q 018860 113 DTHLLLTGGME-----KILRIFDLNRPDAPPR-EVDRSPGSVRTVAWLHSDQTILSTCTDM-----GGVRLWDVRSGEIV 181 (349)
Q Consensus 113 ~~~~l~s~~~d-----~~i~lwd~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~~~ 181 (349)
++.+++.||.+ ..+.+||+.+...... .+........++. . ++.+++.|+.+ ..+.+||+.+.+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-L--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-E--TTEEEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-E--CCEEEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 56677777754 3477788764331110 0110011112222 2 34454444432 36889999988765
Q ss_pred EeecCCC--CeeEEEEcCCCcEE-EEec-------CCeEEEEecCCceeeEEEcCCCce--EEeeecCCCCCEEEEecCC
Q 018860 182 QTLETKS--PVTSAEVSQDGRYI-TTAD-------GSTVKFWDANHFGLVKSYNMPCTI--ESASLEPKYGNKFVAGGED 249 (349)
Q Consensus 182 ~~~~~~~--~v~~~~~~~~~~~l-~~~~-------d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d 249 (349)
..-.... ...++... +++++ .++. -..+..||+.+..-...-..+... ..++.. ++..++.|+.+
T Consensus 138 ~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 214 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHD 214 (302)
T ss_dssp EECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBS
T ss_pred ecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCC
Confidence 4322211 11222222 44443 4432 135888998776543332222211 122222 35677777754
Q ss_pred -----CeEEEEeCCCCcEEEEecCCCcc-eeEEEEccCCCeEEEecCCC-----CEEEecCC
Q 018860 250 -----MWVRFFDFHTGNEIACNKGHHGP-VHCVRFSPGGESYASGSEDG-----TIRIWQTG 300 (349)
Q Consensus 250 -----~~i~v~d~~~~~~~~~~~~h~~~-i~~l~~sp~~~~l~sgs~Dg-----~v~vW~~~ 300 (349)
..+.+||..+.+-...-..-... -.+++. .++..++.|+.++ .+.+||+.
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCC
Confidence 46889999876543321111111 112222 3667777787664 36667653
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.96 E-value=0.14 Score=43.55 Aligned_cols=216 Identities=13% Similarity=0.096 Sum_probs=102.8
Q ss_pred eeEEeeC--CCeEEEEECCCCCEEEE--eccCC-eEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCCCCCc-eeccC
Q 018860 75 RAASASA--DFSAKVWDALTGDVLHS--FEHKH-IVRACSFSEDTHLLLTGGME----KILRIFDLNRPDAPPR-EVDRS 144 (349)
Q Consensus 75 ~l~s~s~--D~~i~vWd~~~~~~~~~--~~~~~-~v~~~~~s~~~~~l~s~~~d----~~i~lwd~~~~~~~~~-~~~~~ 144 (349)
.++.||. ...+.+||..+.+-... +..+. .-.++. .++.+++.||.+ ..+.+||+.+...... .+...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 3444543 35678888876642221 11111 111222 256677777754 5677888765432110 01101
Q ss_pred CCCeEEEEEecCCCeEEEEeeCC------CeEEEEECCCCceEEeecCC--CCeeEEEEcCCCcEE-EEec---------
Q 018860 145 PGSVRTVAWLHSDQTILSTCTDM------GGVRLWDVRSGEIVQTLETK--SPVTSAEVSQDGRYI-TTAD--------- 206 (349)
Q Consensus 145 ~~~i~~~~~~~~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l-~~~~--------- 206 (349)
.....++. . ++.+++.|+.+ ..+.+||+.+.+....-... ..-.++... +++++ .++.
T Consensus 92 r~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 92 RDSLAACA-A--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CBSCEEEE-E--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEE
T ss_pred ccceeEEE-E--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCEEEEECCCCCCCCcccc
Confidence 11112222 2 34555544432 46899999988765432221 111222222 44444 4432
Q ss_pred CCeEEEEecCCceeeEEEcCCCce--EEeeecCCCCCEEEEecCC-----CeEEEEeCCCCcEEEEe--cCCCcceeEEE
Q 018860 207 GSTVKFWDANHFGLVKSYNMPCTI--ESASLEPKYGNKFVAGGED-----MWVRFFDFHTGNEIACN--KGHHGPVHCVR 277 (349)
Q Consensus 207 d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d-----~~i~v~d~~~~~~~~~~--~~h~~~i~~l~ 277 (349)
-..+.+||+.+..-...-..+... ..+... ++..++.|+.+ ..+.+||..+.+-...- ...-....++.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 245 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAA 245 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEE
Confidence 234888998776543332232221 122222 35677777653 46889998876543221 11111112222
Q ss_pred EccCCCeEEEecCC-----CCEEEecCC
Q 018860 278 FSPGGESYASGSED-----GTIRIWQTG 300 (349)
Q Consensus 278 ~sp~~~~l~sgs~D-----g~v~vW~~~ 300 (349)
+ ++.+++.|+.+ ..+.+||+.
T Consensus 246 ~--~~~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 246 V--GSIVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp E--TTEEEEEECBCSSSBCCEEEEEETT
T ss_pred E--CCEEEEEeCcCCCeeeeeEEEEcCC
Confidence 2 66777788755 346666653
No 309
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.91 E-value=0.47 Score=48.52 Aligned_cols=266 Identities=10% Similarity=0.062 Sum_probs=134.4
Q ss_pred eeeEEEeecCCCccEEEEEecCC---------CeEEEeCCCCCeEEEeeccc-CCeEEEEECCCCCeeEEeeCCCeEEEE
Q 018860 19 VVDLFYSPITPDGFFLISASKDS---------SPMLRNGETGDWIGTFEGHK-GAVWSCCLDTNALRAASASADFSAKVW 88 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d~---------~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D~~i~vW 88 (349)
+-.+..+....+...|+++.-.+ .|++.+......+..++... ..|..++.... +++.++ .+.+.++
T Consensus 461 veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~--~vvva~-g~~l~~f 537 (1158)
T 3ei3_A 461 VEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNSS--QVVVAV-GRALYYL 537 (1158)
T ss_dssp EEEECCTTCCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEEEECSS--EEEEEE-TTEEEEE
T ss_pred ccccccccccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEEEeCCC--EEEEEE-CCEEEEE
Confidence 33443334434555666664321 24555554444555665432 34665665432 455444 5678788
Q ss_pred ECCCCCE--EEEeccCCeEEEEEEcCC------CCEEEEEeC-CCeEEEEECCCCCCCCceeccCCCCeEEEEEec-CCC
Q 018860 89 DALTGDV--LHSFEHKHIVRACSFSED------THLLLTGGM-EKILRIFDLNRPDAPPREVDRSPGSVRTVAWLH-SDQ 158 (349)
Q Consensus 89 d~~~~~~--~~~~~~~~~v~~~~~s~~------~~~l~s~~~-d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~~-~~~ 158 (349)
.+..++. .....-...|.|+++.|. +.+++.|.+ |++++++++...+.......+......++.... .+.
T Consensus 538 el~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~ 617 (1158)
T 3ei3_A 538 QIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESS 617 (1158)
T ss_dssp EEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTE
T ss_pred EeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCC
Confidence 7765532 222334567999999763 368888987 999999999742211111111112334443321 233
Q ss_pred eEEEEeeCCCeEEE--EECCCCceEEe---ecCCCCeeEEEEcCCC-cEEEEecCCeEEEEecCCceeeEEEcCCCceEE
Q 018860 159 TILSTCTDMGGVRL--WDVRSGEIVQT---LETKSPVTSAEVSQDG-RYITTADGSTVKFWDANHFGLVKSYNMPCTIES 232 (349)
Q Consensus 159 ~~l~~~~~dg~v~v--wd~~~~~~~~~---~~~~~~v~~~~~~~~~-~~l~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 232 (349)
.++..+..||.+.. +|..+|..... .-+..++.-..+...+ ..+.+..++...++-.++.-.........-...
T Consensus 618 ~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~v~~~ 697 (1158)
T 3ei3_A 618 HYLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYM 697 (1158)
T ss_dssp EEEEEEETTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSCCCEE
T ss_pred cEEEEEeCCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHHhceE
Confidence 45667777788754 45455655422 2233455544444333 234444444444444332211111222211123
Q ss_pred eeecCC-CCCEEEEecCCCeEEEEeCCCCcEE--EEecCCCcceeEEEEccCCCeEEEec
Q 018860 233 ASLEPK-YGNKFVAGGEDMWVRFFDFHTGNEI--ACNKGHHGPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 233 ~~~~~~-~~~~~~~~~~d~~i~v~d~~~~~~~--~~~~~h~~~i~~l~~sp~~~~l~sgs 289 (349)
..|+.. ..+-++..+ ++.+++..+..-..+ ..+. -...+..++++|..+.++.+.
T Consensus 698 ~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 698 CPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp EEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEE
T ss_pred eccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEE
Confidence 334321 134455444 455888877543322 2222 235788999999888765443
No 310
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.91 E-value=0.19 Score=44.03 Aligned_cols=223 Identities=8% Similarity=0.013 Sum_probs=112.3
Q ss_pred CeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec--------cCCeEEEEEEcCC----CCEEEEEeC-------C
Q 018860 63 AVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE--------HKHIVRACSFSED----THLLLTGGM-------E 123 (349)
Q Consensus 63 ~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~--------~~~~v~~~~~s~~----~~~l~s~~~-------d 123 (349)
.-+.++|.+++..|+.+...+.|++++.. +.....+. .......++++|+ +.+.++-+. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 35789999999834455567999999853 32211111 1235688999995 444444322 1
Q ss_pred CeEEEEECCCCCCC---Cc-eeccC------CCCeEEEEEecCCCeEEEEeeC-------------CCeEEEEECCCCc-
Q 018860 124 KILRIFDLNRPDAP---PR-EVDRS------PGSVRTVAWLHSDQTILSTCTD-------------MGGVRLWDVRSGE- 179 (349)
Q Consensus 124 ~~i~lwd~~~~~~~---~~-~~~~~------~~~i~~~~~~~~~~~~l~~~~~-------------dg~v~vwd~~~~~- 179 (349)
..|..|++...... .+ .+... ......+.|.|++ .+.++.++ .|.|.-.|.....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 24555555422100 00 11110 1123468888765 55444433 2467667764220
Q ss_pred -----------eEEeec-CCCCeeEEEEcC-CCcEEEEecC--C--eEEEEecCCc------------------------
Q 018860 180 -----------IVQTLE-TKSPVTSAEVSQ-DGRYITTADG--S--TVKFWDANHF------------------------ 218 (349)
Q Consensus 180 -----------~~~~~~-~~~~v~~~~~~~-~~~~l~~~~d--~--~i~iwd~~~~------------------------ 218 (349)
....+. .......++|.| ++.+.++-.+ + .|.+......
T Consensus 177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 011111 122356788998 6666655322 1 2322111000
Q ss_pred -----eeeEEEcCCCceEEeeecCC------CCCEEEEecCCCeEEEEeCCCCcEEEE---ecCCCcceeEEEEccCCCe
Q 018860 219 -----GLVKSYNMPCTIESASLEPK------YGNKFVAGGEDMWVRFFDFHTGNEIAC---NKGHHGPVHCVRFSPGGES 284 (349)
Q Consensus 219 -----~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~~i~v~d~~~~~~~~~---~~~h~~~i~~l~~sp~~~~ 284 (349)
.++..+.....+..+.+... .+.+|++.-..+.|..+++..++.... +......+..+++.|+|.+
T Consensus 257 ~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~l 336 (353)
T 2g8s_A 257 VAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYL 336 (353)
T ss_dssp CTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCE
T ss_pred CCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcE
Confidence 01111111122344455321 255666666778888888776543322 2222357899999999986
Q ss_pred EEE
Q 018860 285 YAS 287 (349)
Q Consensus 285 l~s 287 (349)
+++
T Consensus 337 yv~ 339 (353)
T 2g8s_A 337 YVL 339 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.78 E-value=0.22 Score=42.83 Aligned_cols=249 Identities=10% Similarity=0.070 Sum_probs=147.6
Q ss_pred CeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEe
Q 018860 42 SPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGG 121 (349)
Q Consensus 42 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 121 (349)
.+.|.|..+...+....- ..-+.-.+|..+.||--+ ..+++|+|+++.+.++.+..+..|.--.|-.+..+-+ .+
T Consensus 50 ~VvIiDl~n~~~~~Rrpi---~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~l-VT 124 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVAL-VT 124 (365)
T ss_dssp EEEEEETTSTTSCEEEEC---CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEE-EE
T ss_pred EEEEEECCCCCCcccccc---ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEE-Ec
Confidence 567777766543311111 112334578777776655 6789999999999898888777777777765443322 22
Q ss_pred CCCeEEEEECCCCCCCCceeccCC----CCeEEEEEecCCCeEEEEee------CCCeEEEEECCCCceEEeecCCCCee
Q 018860 122 MEKILRIFDLNRPDAPPREVDRSP----GSVRTVAWLHSDQTILSTCT------DMGGVRLWDVRSGEIVQTLETKSPVT 191 (349)
Q Consensus 122 ~d~~i~lwd~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~l~~~~------~dg~v~vwd~~~~~~~~~~~~~~~v~ 191 (349)
+..+.-|++.....+.+.+.+|. ..|..-...++.+.+++.|- -.|.+.+|..+.+. -+.++++...-
T Consensus 125 -~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F 202 (365)
T 2xzh_A 125 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASF 202 (365)
T ss_dssp -SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEE
T ss_pred -CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeee
Confidence 45789999976555555555543 23444444555555554442 12677888876543 23444432111
Q ss_pred EEEEcCCC-----cEEE-Ee---cCCeEEEEecCCc---e-----eeEEEcCC-----CceEEeeecCCCCCEEEEecCC
Q 018860 192 SAEVSQDG-----RYIT-TA---DGSTVKFWDANHF---G-----LVKSYNMP-----CTIESASLEPKYGNKFVAGGED 249 (349)
Q Consensus 192 ~~~~~~~~-----~~l~-~~---~d~~i~iwd~~~~---~-----~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d 249 (349)
..+-.+| .+++ +. ..+.+.+-++... . .......+ .-+.++..+++ -..++.-+.-
T Consensus 203 -~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~k-ygviyviTK~ 280 (365)
T 2xzh_A 203 -AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK-HDVVFLITKY 280 (365)
T ss_dssp -EEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETT-TTEEEEEETT
T ss_pred -EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEeccc-CCEEEEEeCC
Confidence 1111111 1222 21 1357888887442 1 01111111 12345555655 3567777889
Q ss_pred CeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 250 MWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 250 ~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
|.|++||+.++.++...+--..+|...+.+....-++.....|.|.--.+
T Consensus 281 G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 281 GYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred cEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 99999999999999888777788887777666555666778887766544
No 312
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.65 E-value=0.27 Score=42.09 Aligned_cols=207 Identities=10% Similarity=0.053 Sum_probs=96.5
Q ss_pred EEEEecCCCeEEEeCCCCCeEE-EeecccCCeEEEEECCCCCeeEEeeC----C-------CeEEEEECCCCCEEEEecc
Q 018860 34 LISASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDTNALRAASASA----D-------FSAKVWDALTGDVLHSFEH 101 (349)
Q Consensus 34 l~s~s~d~~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~----D-------~~i~vWd~~~~~~~~~~~~ 101 (349)
++.|+ ..+..||..+.++.. .+..........+...++..++.||. + ..+.+||..+.+-...-.-
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34454 467788888887753 11112223333344456677777773 1 1267788876643221111
Q ss_pred CCeE--EEEEEcCCCCEEEEEeCC--------CeEEEEECCCCCCCCc-eeccCCCCeEEEEEecCCCeEEEEeeC----
Q 018860 102 KHIV--RACSFSEDTHLLLTGGME--------KILRIFDLNRPDAPPR-EVDRSPGSVRTVAWLHSDQTILSTCTD---- 166 (349)
Q Consensus 102 ~~~v--~~~~~s~~~~~l~s~~~d--------~~i~lwd~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~~~~---- 166 (349)
+.+- .+++. -++.+++.||.+ ..+.+||+.+...... .+........++. . ++.+++.|+.
T Consensus 86 p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~-~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 86 PSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--H-MDLVYVIGGKGSDR 161 (315)
T ss_dssp SSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--E-TTEEEEECCBCTTS
T ss_pred CcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--E-CCEEEEEeCCCCCC
Confidence 1110 11111 156666777632 3477888765431100 1111111112222 2 3445444443
Q ss_pred --CCeEEEEECCCCceEEeecCCC--CeeEEEEcCCCcE-EEEecCC-----eEEEEecCCceeeEEEcCCCce--EEee
Q 018860 167 --MGGVRLWDVRSGEIVQTLETKS--PVTSAEVSQDGRY-ITTADGS-----TVKFWDANHFGLVKSYNMPCTI--ESAS 234 (349)
Q Consensus 167 --dg~v~vwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~-l~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~--~~~~ 234 (349)
...+.+||+.+.+....-.... ...++... ++++ +.++.++ .+.+||+.+..-...-..+... ..++
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV 240 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE
Confidence 1468999999887654322211 11223333 4444 4554332 5788898776443332222211 1122
Q ss_pred ecCCCCCEEEEecCC
Q 018860 235 LEPKYGNKFVAGGED 249 (349)
Q Consensus 235 ~~~~~~~~~~~~~~d 249 (349)
.. ++..++.|+.+
T Consensus 241 ~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 241 SL--VGTLYAIGGFA 253 (315)
T ss_dssp EE--TTEEEEEEEEE
T ss_pred EE--CCEEEEECCcc
Confidence 21 35666667653
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.65 E-value=0.21 Score=44.55 Aligned_cols=129 Identities=16% Similarity=0.200 Sum_probs=87.4
Q ss_pred CeEEEEECCCCceEEeecCC-----CCeeEEEEcCCCcEEEEecCCeEEEEecCCce------------eeEEEcC----
Q 018860 168 GGVRLWDVRSGEIVQTLETK-----SPVTSAEVSQDGRYITTADGSTVKFWDANHFG------------LVKSYNM---- 226 (349)
Q Consensus 168 g~v~vwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~------------~~~~~~~---- 226 (349)
+.||.-++..+...+.+... ..+..+..+|+|.+|+...+..|.+-.+.... ..+.+..
T Consensus 41 n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~ 120 (452)
T 3pbp_A 41 NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEE 120 (452)
T ss_dssp TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC
T ss_pred CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcc
Confidence 68888887644333343332 25778999999999999888899998876211 1223332
Q ss_pred ---CCceEEeeecCCC--CCEEEEecCCCeEEEEeCCCCcE-EEEe---------cCCCcceeEEEEccCCCeEEE--ec
Q 018860 227 ---PCTIESASLEPKY--GNKFVAGGEDMWVRFFDFHTGNE-IACN---------KGHHGPVHCVRFSPGGESYAS--GS 289 (349)
Q Consensus 227 ---~~~~~~~~~~~~~--~~~~~~~~~d~~i~v~d~~~~~~-~~~~---------~~h~~~i~~l~~sp~~~~l~s--gs 289 (349)
+..+..+.|+|.. +..+++=..|+.||+||+..... ...+ ..+...|.+++|.+++-.|.. .+
T Consensus 121 ~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t 200 (452)
T 3pbp_A 121 VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTT 200 (452)
T ss_dssp --CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECT
T ss_pred cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecC
Confidence 3457888999853 45888889999999999975221 1122 223367889999998766665 55
Q ss_pred CCCCEEE
Q 018860 290 EDGTIRI 296 (349)
Q Consensus 290 ~Dg~v~v 296 (349)
.+|-|+-
T Consensus 201 ~~GDIYA 207 (452)
T 3pbp_A 201 EGGDIFA 207 (452)
T ss_dssp TSCEEEE
T ss_pred CCCCEEE
Confidence 8887654
No 314
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.52 E-value=0.42 Score=42.82 Aligned_cols=251 Identities=9% Similarity=0.053 Sum_probs=147.4
Q ss_pred CeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEe
Q 018860 42 SPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGG 121 (349)
Q Consensus 42 ~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 121 (349)
.+.|.|..++..+.... = ..-+.-.+|..+.||--+ ..+++|+|+++...++.+.....|.--.|-.+.. |+-.+
T Consensus 49 ~vvIiDl~~~~~~~rrp-i--~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~-l~lVT 123 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRP-I--SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT-VALVT 123 (494)
T ss_dssp EEEEEETTSTTSCEEEE-C--CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTE-EEEEC
T ss_pred eEEEEECCCCCcceecc-c--ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCe-EEEEc
Confidence 56677766654321111 0 112344677777666555 7799999999998888887666665555644433 33222
Q ss_pred CCCeEEEEECCCCCCCCceeccCC----CCeEEEEEecCCCeEEEEee------CCCeEEEEECCCCceEEeecCCCC-e
Q 018860 122 MEKILRIFDLNRPDAPPREVDRSP----GSVRTVAWLHSDQTILSTCT------DMGGVRLWDVRSGEIVQTLETKSP-V 190 (349)
Q Consensus 122 ~d~~i~lwd~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~l~~~~------~dg~v~vwd~~~~~~~~~~~~~~~-v 190 (349)
+..|.-|++.....+.+.+.+|. ..|..-...++...+++.|- -.|.+.+|....+.. +.++++.. .
T Consensus 124 -~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F 201 (494)
T 1bpo_A 124 -DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASF 201 (494)
T ss_dssp -SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEE
T ss_pred -CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeeeee
Confidence 45789999976555555555543 23444444555555554442 126778888765432 33444321 1
Q ss_pred eEEEEcCC---CcEEE-Ee---cCCeEEEEecCCc--------eeeEEEcCC-----CceEEeeecCCCCCEEEEecCCC
Q 018860 191 TSAEVSQD---GRYIT-TA---DGSTVKFWDANHF--------GLVKSYNMP-----CTIESASLEPKYGNKFVAGGEDM 250 (349)
Q Consensus 191 ~~~~~~~~---~~~l~-~~---~d~~i~iwd~~~~--------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~ 250 (349)
..+.+..+ ..+++ +. .++.+.+.++... +.......+ .-+.++..++. -..++.-+.-|
T Consensus 202 ~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~k-ygviyviTK~G 280 (494)
T 1bpo_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK-HDVVFLITKYG 280 (494)
T ss_dssp EEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETT-TTEEEEEETTS
T ss_pred EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEeccc-CCEEEEEecCc
Confidence 11111111 01222 22 2478888888543 011111111 12345566665 35677778899
Q ss_pred eEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecCC
Q 018860 251 WVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG 300 (349)
Q Consensus 251 ~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~~ 300 (349)
.|++||+.++.++...+--..+|...+.+....-++.....|.|.--.+.
T Consensus 281 ~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 281 YIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred eEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 99999999999998887777888887777666667777788887665443
No 315
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.43 E-value=0.38 Score=41.18 Aligned_cols=219 Identities=11% Similarity=0.085 Sum_probs=101.5
Q ss_pred EEEEEecCCCeEEEeCCCCCeEEE-eecccCCeEEEEECCCCCeeEEeeC----CC-------eEEEEECCCCCEEEE--
Q 018860 33 FLISASKDSSPMLRNGETGDWIGT-FEGHKGAVWSCCLDTNALRAASASA----DF-------SAKVWDALTGDVLHS-- 98 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s~----D~-------~i~vWd~~~~~~~~~-- 98 (349)
.++.|+. .+..||..+.++... +..........+...++..++.||. ++ .+.++|..+.+-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 367889888887541 1111122233334456666777773 12 166788776543221
Q ss_pred eccCC-eEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCCCCCceeccCCCCeE--EEEEecCCCeEEEEeeC--
Q 018860 99 FEHKH-IVRACSFSEDTHLLLTGGME-------KILRIFDLNRPDAPPREVDRSPGSVR--TVAWLHSDQTILSTCTD-- 166 (349)
Q Consensus 99 ~~~~~-~v~~~~~s~~~~~l~s~~~d-------~~i~lwd~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~~l~~~~~-- 166 (349)
+..+. .-..+.+ ++.+++.||.+ ..+.+||+.+... ..+...+.+.. ++.. .++.+++.|+.
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~ 169 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKW--SEVKNLPIKVYGHNVIS--HNGMIYCLGGKTD 169 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEE--EEECCCSSCEESCEEEE--ETTEEEEECCEES
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCE--eECCCCCCcccccEEEE--ECCEEEEEcCCCC
Confidence 11111 1111222 56677777753 2366777754322 11111111111 1221 23445444432
Q ss_pred ----CCeEEEEECCCCceEEeecCC--CCeeEEEEcCCCcE-EEEecC-----CeEEEEecCCceeeEEEcCCCce--EE
Q 018860 167 ----MGGVRLWDVRSGEIVQTLETK--SPVTSAEVSQDGRY-ITTADG-----STVKFWDANHFGLVKSYNMPCTI--ES 232 (349)
Q Consensus 167 ----dg~v~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~-l~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~--~~ 232 (349)
...+.+||+.+.+....-... ....++... ++++ +.++.+ ..+.+||+.+..-...-..+... ..
T Consensus 170 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 248 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSIS 248 (318)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCE
T ss_pred CCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceE
Confidence 246999999988765432221 111223333 3444 444432 35778888765433322222211 11
Q ss_pred eeecCCCCCEEEEecCC--------------CeEEEEeCCCCcE
Q 018860 233 ASLEPKYGNKFVAGGED--------------MWVRFFDFHTGNE 262 (349)
Q Consensus 233 ~~~~~~~~~~~~~~~~d--------------~~i~v~d~~~~~~ 262 (349)
+... ++..++.|+.+ ..+.+||..+.+-
T Consensus 249 ~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 249 LVSL--AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp EEEE--TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred EEEE--CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 2221 35666666643 3466677665443
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.42 E-value=0.35 Score=41.21 Aligned_cols=173 Identities=14% Similarity=0.104 Sum_probs=81.8
Q ss_pred CCCEEEEEeC----C-----CeEEEEECCCCCCCC-ceeccCCCCeEEEEEecCCCeEEEEeeC-----CCeEEEEECCC
Q 018860 113 DTHLLLTGGM----E-----KILRIFDLNRPDAPP-REVDRSPGSVRTVAWLHSDQTILSTCTD-----MGGVRLWDVRS 177 (349)
Q Consensus 113 ~~~~l~s~~~----d-----~~i~lwd~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~l~~~~~-----dg~v~vwd~~~ 177 (349)
++.+++.||. + ..+.+||+.+..... ..+........++. . ++.+++.|+. ...+.+||+.+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV-I--DGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE-E--TTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE-E--CCEEEEEcCCCCCcccccEEEECCCC
Confidence 5666666665 2 346778876433110 01111111112222 2 3445544432 14689999998
Q ss_pred CceEEeecCC--CCeeEEEEcCCCcEE-EEecC-----CeEEEEecCCceeeEEEcCCCc--eEEeeecCCCCCEEEEec
Q 018860 178 GEIVQTLETK--SPVTSAEVSQDGRYI-TTADG-----STVKFWDANHFGLVKSYNMPCT--IESASLEPKYGNKFVAGG 247 (349)
Q Consensus 178 ~~~~~~~~~~--~~v~~~~~~~~~~~l-~~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 247 (349)
.+....-... ..-.++... +++++ .++.+ ..+..||+.+..-...-..+.. ...++.. ++..++.|+
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 223 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGG 223 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred CeEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeC
Confidence 8765432211 111222223 44444 44432 4588899876543332222221 1122222 356777777
Q ss_pred CC-----CeEEEEeCCCCcEEEEecCCCc-ceeEEEEccCCCeEEEecCCC
Q 018860 248 ED-----MWVRFFDFHTGNEIACNKGHHG-PVHCVRFSPGGESYASGSEDG 292 (349)
Q Consensus 248 ~d-----~~i~v~d~~~~~~~~~~~~h~~-~i~~l~~sp~~~~l~sgs~Dg 292 (349)
.+ ..+.+||+.+.+-......... .-.+++. -++.+++.|+.++
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV-HQGRIYVLGGYDG 273 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCS
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE-ECCEEEEEcCcCC
Confidence 54 5689999887654322111111 1112222 2566777777554
No 317
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.08 E-value=1.1 Score=46.30 Aligned_cols=271 Identities=11% Similarity=0.095 Sum_probs=143.6
Q ss_pred eEEEeecCCC-ccEEEEEec---CCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEE
Q 018860 21 DLFYSPITPD-GFFLISASK---DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVL 96 (349)
Q Consensus 21 ~~~fs~~~~~-~~~l~s~s~---d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~ 96 (349)
++.|...+-. .+|+..--. ...+.|.|..++..+.. +. =..-+.-.+|..+.||--+ ..+++|+|+.+...+
T Consensus 24 ~i~f~~~T~eSDkyicvre~~~~~~~vvIidl~~~~~~~r-rp--i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~kl 99 (1630)
T 1xi4_A 24 NIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIR-RP--ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKM 99 (1630)
T ss_pred cccccceeeecCceEEEEecCCCCceEEEEECCCCCCccc-cc--ccchhhccCCCcceEEEec-CCeEEEeehHHhhhh
Confidence 5566555433 334433221 12566677665443210 00 0011233567776666544 679999999988888
Q ss_pred EEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceeccCC----CCeEEEEEecCCCeEEEEee------C
Q 018860 97 HSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDRSP----GSVRTVAWLHSDQTILSTCT------D 166 (349)
Q Consensus 97 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~l~~~~------~ 166 (349)
+.+..+..|.--.|-.+..+-++ + +..|.-|++.....+.+.+.+|. ..|..-...++...+++.|- -
T Consensus 100 ks~~~~e~VvfWkWis~~~l~lV-T-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v 177 (1630)
T 1xi4_A 100 KAHTMTDDVTFWKWISLNTVALV-T-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV 177 (1630)
T ss_pred cccccCCCceEEEecCCCeeEEE-c-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcc
Confidence 77776666766666544333222 2 45689999976555555555552 23444444455555554442 2
Q ss_pred CCeEEEEECCCCceEEeecCCCC-eeEEEE--cCC-CcEEEEe----cCCeEEEEecCCc----eee--E--EEcCCC--
Q 018860 167 MGGVRLWDVRSGEIVQTLETKSP-VTSAEV--SQD-GRYITTA----DGSTVKFWDANHF----GLV--K--SYNMPC-- 228 (349)
Q Consensus 167 dg~v~vwd~~~~~~~~~~~~~~~-v~~~~~--~~~-~~~l~~~----~d~~i~iwd~~~~----~~~--~--~~~~~~-- 228 (349)
.|.+.+|....+.. +.++++.. ...+.. .+. ..+++-+ .++.+.+-++... ... + ....+.
T Consensus 178 ~G~mQLyS~er~~s-Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~ 256 (1630)
T 1xi4_A 178 VGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (1630)
T ss_pred cceeeeeecccccc-hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccc
Confidence 36777777654432 22222211 111111 111 1122211 2468888887543 111 0 011111
Q ss_pred ---ceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 229 ---TIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 229 ---~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
-+.++..++. -..+..-+.-|.|++||+.++..+..-+-...+|...+.++...-++.....|.|.--.+
T Consensus 257 ~~Dfpv~~~vs~k-~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v 329 (1630)
T 1xi4_A 257 QNDFPVAMQISEK-HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 329 (1630)
T ss_pred ccCcceEEEeccc-cCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEE
Confidence 1234445554 345667788899999999999988776655667766666544444555566776655443
No 318
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.01 E-value=1.6 Score=44.58 Aligned_cols=201 Identities=15% Similarity=0.111 Sum_probs=104.0
Q ss_pred EEEEEecCCCeEEEeCCCCCeE--EEeecccCCeEEEEECCC------CCeeEEeeC-CCeEEEEECCCCCEEEEecc--
Q 018860 33 FLISASKDSSPMLRNGETGDWI--GTFEGHKGAVWSCCLDTN------ALRAASASA-DFSAKVWDALTGDVLHSFEH-- 101 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~------~~~l~s~s~-D~~i~vWd~~~~~~~~~~~~-- 101 (349)
+++.++ .+.+.++....+++. ...+ -...|.|+++.+. +.+++.|.+ |++|+|+++.+.+.+....-
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~ 602 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 602 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC
Confidence 455554 466666655444322 1111 2457999998753 468888886 99999999998776655432
Q ss_pred CCeEEEEEEc--CCCCEEEEEeCCCeEEEEECCCCCCCCc----eeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 018860 102 KHIVRACSFS--EDTHLLLTGGMEKILRIFDLNRPDAPPR----EVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDV 175 (349)
Q Consensus 102 ~~~v~~~~~s--~~~~~l~s~~~d~~i~lwd~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~ 175 (349)
....+++.+. ....+|..|-.||.+.-+.++....... ...+ ..++.-..+...+..-+.++++ ....++-.
T Consensus 603 ~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~-rp~liy~~ 680 (1158)
T 3ei3_A 603 EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSD-RPTVIYSS 680 (1158)
T ss_dssp SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESS-SCEEEEES
T ss_pred CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECC-CCEEEEEc
Confidence 2234444432 2335788888999887666543211110 1112 2233322333333333334444 33334433
Q ss_pred CCCceE-EeecCCCCee-EEEEcCCC--cEEEEecCCeEEEEecCCce--eeEEEcCCCceEEeeecCCC
Q 018860 176 RSGEIV-QTLETKSPVT-SAEVSQDG--RYITTADGSTVKFWDANHFG--LVKSYNMPCTIESASLEPKY 239 (349)
Q Consensus 176 ~~~~~~-~~~~~~~~v~-~~~~~~~~--~~l~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~ 239 (349)
+ ++.. ..+... ++. ...|+... .-++...++.++|..+.... .++.++....+..++++|..
T Consensus 681 ~-~~l~~s~l~~~-~v~~~~~F~se~~~~g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~ 748 (1158)
T 3ei3_A 681 N-HKLVFSNVNLK-EVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVS 748 (1158)
T ss_dssp S-SSEEEEEBSSS-CCCEEEEECCSSSTTEEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGG
T ss_pred C-CceEEeccChH-HhceEeccCcccCCCcEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCC
Confidence 3 3322 222222 232 23343221 23444445668887764332 34555566667777777653
No 319
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.99 E-value=0.72 Score=40.33 Aligned_cols=189 Identities=15% Similarity=0.174 Sum_probs=101.9
Q ss_pred eEEEEECCCCCeeEEee------------CCCeEEEEECCC--CCEEEEecc--------CCeEEEEEEcC--CCC-EEE
Q 018860 64 VWSCCLDTNALRAASAS------------ADFSAKVWDALT--GDVLHSFEH--------KHIVRACSFSE--DTH-LLL 118 (349)
Q Consensus 64 v~~~~~~~~~~~l~s~s------------~D~~i~vWd~~~--~~~~~~~~~--------~~~v~~~~~s~--~~~-~l~ 118 (349)
...+.+.++|..+++++ .+|.|.++|.++ ++. ..+.. .-....+.+.+ +++ +|+
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34556778776655552 689999999873 232 12211 11345566544 443 344
Q ss_pred EEe---CCCeEEEEECCCCCCCCc---eecc-CCCCeEEEEEecCCCeEEEEee-----------------CCCeEEEEE
Q 018860 119 TGG---MEKILRIFDLNRPDAPPR---EVDR-SPGSVRTVAWLHSDQTILSTCT-----------------DMGGVRLWD 174 (349)
Q Consensus 119 s~~---~d~~i~lwd~~~~~~~~~---~~~~-~~~~i~~~~~~~~~~~~l~~~~-----------------~dg~v~vwd 174 (349)
.+. .+.+|.+|+++....... .+.+ .-...+.+.+.+++ .+.++.. ..|.|..+|
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 432 257888988764332111 1111 12346777777654 4444432 125566666
Q ss_pred CCCCceEEeecCCCCeeEEEEcCCCcEEEEe--cCCeEEEEecCCc---eeeEEEcCCCceEEeeecCCCCCEEEEecCC
Q 018860 175 VRSGEIVQTLETKSPVTSAEVSQDGRYITTA--DGSTVKFWDANHF---GLVKSYNMPCTIESASLEPKYGNKFVAGGED 249 (349)
Q Consensus 175 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 249 (349)
.. +.......-...+.++++||++.+..+ ..+.|..|++... ...+.+..+..+..+++.+.+++.++++..+
T Consensus 210 ~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 210 PN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp TT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred CC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 53 322222222345789999999876554 3688999998632 2233444455556677765336777766543
Q ss_pred -CeEEEEe
Q 018860 250 -MWVRFFD 256 (349)
Q Consensus 250 -~~i~v~d 256 (349)
+.|..|+
T Consensus 288 g~~v~~~~ 295 (355)
T 3sre_A 288 GMRIFFYD 295 (355)
T ss_dssp HHHHHSCC
T ss_pred ceEEEEEC
Confidence 2343343
No 320
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.93 E-value=0.77 Score=40.09 Aligned_cols=97 Identities=20% Similarity=0.188 Sum_probs=57.6
Q ss_pred eeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCe--EEEee---cccCCeEEEEECCC----CCeeEEeeCC-----Ce
Q 018860 19 VVDLFYSPITPDGFFLISASKDSSPMLRNGETGDW--IGTFE---GHKGAVWSCCLDTN----ALRAASASAD-----FS 84 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~--~~~~~---~h~~~v~~~~~~~~----~~~l~s~s~D-----~~ 84 (349)
...++|.| +|++++ +..++.|.+++ +++. +..+. ........++|+|+ +...++-... ..
T Consensus 33 P~~ia~~p---dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 33 PWALAFLP---DGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp EEEEEECT---TSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred ceEEEEcC---CCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 46888886 888555 56678888887 3432 22221 11245688999998 4444444332 56
Q ss_pred EEEEECCCCC-----EE-EEecc----CCeEEEEEEcCCCCEEEEEe
Q 018860 85 AKVWDALTGD-----VL-HSFEH----KHIVRACSFSEDTHLLLTGG 121 (349)
Q Consensus 85 i~vWd~~~~~-----~~-~~~~~----~~~v~~~~~s~~~~~l~s~~ 121 (349)
|..++...+. .+ ..+.. .+....++|.|+|.+.++-+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 7778776432 11 11221 12346899999998777754
No 321
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.93 E-value=0.78 Score=40.12 Aligned_cols=224 Identities=11% Similarity=0.033 Sum_probs=115.7
Q ss_pred CeEEEEECCCCCeeEEeeCCCeEEEEECCCCC-EEEEec----cCCeEEEEEEcCC----CCEEEEEeC---C----CeE
Q 018860 63 AVWSCCLDTNALRAASASADFSAKVWDALTGD-VLHSFE----HKHIVRACSFSED----THLLLTGGM---E----KIL 126 (349)
Q Consensus 63 ~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~-~~~~~~----~~~~v~~~~~s~~----~~~l~s~~~---d----~~i 126 (349)
.-+.++|.+++.+++ +..++.|++++. .++ .+..+. .......++++|+ +.+.++-+. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 357899999997544 566699999973 454 222211 1245789999997 444444332 2 456
Q ss_pred EEEECCCCCCC---Cc-e---ecc-CCCCeEEEEEecCCCeEEEEeeC------------CCeEEEEECCCC--------
Q 018860 127 RIFDLNRPDAP---PR-E---VDR-SPGSVRTVAWLHSDQTILSTCTD------------MGGVRLWDVRSG-------- 178 (349)
Q Consensus 127 ~lwd~~~~~~~---~~-~---~~~-~~~~i~~~~~~~~~~~~l~~~~~------------dg~v~vwd~~~~-------- 178 (349)
..|++...... .+ . +.. .......+.|.|++..+++.+.. .|.|...+....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 66665432100 00 1 111 11123457787765544443321 245666655321
Q ss_pred -ceEEeecCCCCeeEEEEcC-CCcEEEEec--C--CeEEEEecCCc----------------eeeEEE-cCCCceEEeee
Q 018860 179 -EIVQTLETKSPVTSAEVSQ-DGRYITTAD--G--STVKFWDANHF----------------GLVKSY-NMPCTIESASL 235 (349)
Q Consensus 179 -~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--d--~~i~iwd~~~~----------------~~~~~~-~~~~~~~~~~~ 235 (349)
..+... .......+++.| ++.+.++-. + ..|.+...... .++..+ .....+..+.+
T Consensus 188 ~~~i~a~-G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~ 266 (354)
T 3a9g_A 188 NSPIWSY-GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASF 266 (354)
T ss_dssp TCCEEEE-CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEE
T ss_pred CCcEEEE-ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEE
Confidence 011111 122345788999 677666532 2 23444332110 122222 11223445555
Q ss_pred cC------CCCCEEEEecCCCeEEEEeCCCC-cEE--EE-ecCCCcceeEEEEccCCCeEEEec
Q 018860 236 EP------KYGNKFVAGGEDMWVRFFDFHTG-NEI--AC-NKGHHGPVHCVRFSPGGESYASGS 289 (349)
Q Consensus 236 ~~------~~~~~~~~~~~d~~i~v~d~~~~-~~~--~~-~~~h~~~i~~l~~sp~~~~l~sgs 289 (349)
.. ..+.++++.-..+.|..+++... +.. .. +.+....+..+++.|+|.+.++..
T Consensus 267 y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 267 VHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 21 23556666667788988888753 221 12 223345788999999997666553
No 322
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.90 E-value=0.47 Score=41.24 Aligned_cols=91 Identities=8% Similarity=0.051 Sum_probs=44.2
Q ss_pred CccEEEEEecC-CCeEEEeCCC--CCeEEEeecc---cCCeEEEEECCCCCeeEEeeC-C---------CeEEEEECCCC
Q 018860 30 DGFFLISASKD-SSPMLRNGET--GDWIGTFEGH---KGAVWSCCLDTNALRAASASA-D---------FSAKVWDALTG 93 (349)
Q Consensus 30 ~~~~l~s~s~d-~~i~iw~~~~--~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~s~-D---------~~i~vWd~~~~ 93 (349)
+++..+.|+.+ ..+..+|..+ .++...-... ...-.++.+ +++.++.||. + ..+.++|..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 45666666654 3567778763 5554221111 111112222 4566666665 2 35888888765
Q ss_pred CEEEE--ec-cCCeEEEEEEcCCCCEEEEEeCC
Q 018860 94 DVLHS--FE-HKHIVRACSFSEDTHLLLTGGME 123 (349)
Q Consensus 94 ~~~~~--~~-~~~~v~~~~~s~~~~~l~s~~~d 123 (349)
+=... .. .+..-.+++. .++++++.||.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 42221 11 1111112222 467777888764
No 323
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.88 E-value=0.034 Score=48.37 Aligned_cols=106 Identities=12% Similarity=0.034 Sum_probs=65.9
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeecc-cCCeEEEEE---CCCCCeeEEe-eCCCeEEEEECCCCCEEEEeccC---
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEGH-KGAVWSCCL---DTNALRAASA-SADFSAKVWDALTGDVLHSFEHK--- 102 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h-~~~v~~~~~---~~~~~~l~s~-s~D~~i~vWd~~~~~~~~~~~~~--- 102 (349)
+.+++.++.||.+.-.|.++|+.+.+++.. ..++....- ..++..++.. ..||.+..++..+|.....+.-+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 347888999999999999999988888764 123322110 1123334343 58999999999888555444321
Q ss_pred --CeEEEE---EE-----cCCCCEEEEEeCCCeEEEEECCCCCC
Q 018860 103 --HIVRAC---SF-----SEDTHLLLTGGMEKILRIFDLNRPDA 136 (349)
Q Consensus 103 --~~v~~~---~~-----s~~~~~l~s~~~d~~i~lwd~~~~~~ 136 (349)
.++..- .. +..+..+++|+.++.+...|+.+++.
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 122210 00 01455788899999988888876543
No 324
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.82 E-value=0.86 Score=39.84 Aligned_cols=176 Identities=13% Similarity=0.136 Sum_probs=94.6
Q ss_pred CCCeEEEEECCCCCCCCcee--cc-----CCCCeEEEEEec--CCC-eEEEEeeC--CCeEEEEECCCC--c--eEEeec
Q 018860 122 MEKILRIFDLNRPDAPPREV--DR-----SPGSVRTVAWLH--SDQ-TILSTCTD--MGGVRLWDVRSG--E--IVQTLE 185 (349)
Q Consensus 122 ~d~~i~lwd~~~~~~~~~~~--~~-----~~~~i~~~~~~~--~~~-~~l~~~~~--dg~v~vwd~~~~--~--~~~~~~ 185 (349)
.+|.|.++|++.+......+ .+ ......-+.+.+ ++. ++++.-.. ..+|.+|++..+ . .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 68889999987432221111 11 112344555544 233 34444222 357888776542 2 233444
Q ss_pred CC--CCeeEEEEcCCCcEEEEec------------------CCeEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEE
Q 018860 186 TK--SPVTSAEVSQDGRYITTAD------------------GSTVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVA 245 (349)
Q Consensus 186 ~~--~~v~~~~~~~~~~~l~~~~------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (349)
+. ...+.+.+.++|.+.++.. .+.|..+|.. +.......-.....++++|+....+++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEE
Confidence 32 3478899999998776643 1345555553 222111111235778999863344556
Q ss_pred ecCCCeEEEEeCCC-CcEE--EEecCCCcceeEEEEcc-CCCeEEEecCC-CCEEEecCC
Q 018860 246 GGEDMWVRFFDFHT-GNEI--ACNKGHHGPVHCVRFSP-GGESYASGSED-GTIRIWQTG 300 (349)
Q Consensus 246 ~~~d~~i~v~d~~~-~~~~--~~~~~h~~~i~~l~~sp-~~~~l~sgs~D-g~v~vW~~~ 300 (349)
-+..+.|+.|++.. ++.. ..+ ...+..-.+++.+ +|.+.+++..+ +.|..|+..
T Consensus 239 dt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred eCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 67789999999863 3321 122 1235567788888 58776655444 344445443
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.80 E-value=0.77 Score=39.11 Aligned_cols=206 Identities=12% Similarity=0.057 Sum_probs=97.6
Q ss_pred eEEeeCCCeEEEEECCCCCEEE-EeccC-CeEEEEEEcCCCCEEEEEeC-----C------CeEEEEECCCCCCCCceec
Q 018860 76 AASASADFSAKVWDALTGDVLH-SFEHK-HIVRACSFSEDTHLLLTGGM-----E------KILRIFDLNRPDAPPREVD 142 (349)
Q Consensus 76 l~s~s~D~~i~vWd~~~~~~~~-~~~~~-~~v~~~~~s~~~~~l~s~~~-----d------~~i~lwd~~~~~~~~~~~~ 142 (349)
++.|+ ..+.+||..+++=.. .+..+ ......+...++.+++.||. . ..+..||+.+... ..+.
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W--~~~~ 83 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW--LGMP 83 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE--EECC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE--EECC
Confidence 44455 468889988775322 12111 11122233457777777773 1 1256677754331 1111
Q ss_pred cCCCCe--EEEEEecCCCeEEEEeeC--------CCeEEEEECCCCceEEeecC--CCCeeEEEEcCCCcE-EEEec-C-
Q 018860 143 RSPGSV--RTVAWLHSDQTILSTCTD--------MGGVRLWDVRSGEIVQTLET--KSPVTSAEVSQDGRY-ITTAD-G- 207 (349)
Q Consensus 143 ~~~~~i--~~~~~~~~~~~~l~~~~~--------dg~v~vwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~-l~~~~-d- 207 (349)
..+.+. .+++.. ++.+++.|+. ...+.+||+.+.+....-.. ...-.++... ++++ +.++. +
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH-MDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCTT
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE-CCEEEEEeCCCCC
Confidence 111111 122222 3455544442 14689999998876543221 1111223333 4444 44443 1
Q ss_pred ----CeEEEEecCCceeeEEEcCCCce--EEeeecCCCCCEEEEecCCC-----eEEEEeCCCCcEEEEecCCCcc-eeE
Q 018860 208 ----STVKFWDANHFGLVKSYNMPCTI--ESASLEPKYGNKFVAGGEDM-----WVRFFDFHTGNEIACNKGHHGP-VHC 275 (349)
Q Consensus 208 ----~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~-----~i~v~d~~~~~~~~~~~~h~~~-i~~ 275 (349)
..+.+||+.+..-...-..+... ..++.. +++.++.|+.++ .+.+||..+.+-...-...... -.+
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 238 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLS 238 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccccee
Confidence 36888998775433322222211 122222 356777777543 6888998876543321111111 112
Q ss_pred EEEccCCCeEEEecCC
Q 018860 276 VRFSPGGESYASGSED 291 (349)
Q Consensus 276 l~~sp~~~~l~sgs~D 291 (349)
++. -++.+++.|+.+
T Consensus 239 ~~~-~~~~l~v~GG~~ 253 (315)
T 4asc_A 239 LVS-LVGTLYAIGGFA 253 (315)
T ss_dssp EEE-ETTEEEEEEEEE
T ss_pred EEE-ECCEEEEECCcc
Confidence 222 356677777764
No 326
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.19 E-value=1.3 Score=37.75 Aligned_cols=201 Identities=13% Similarity=0.112 Sum_probs=91.6
Q ss_pred eEEEEECCCCCEEE-Eecc-CCeEEEEEEcCCCCEEEEEeC----CC-------eEEEEECCCCCCCCc-eeccCCCCeE
Q 018860 84 SAKVWDALTGDVLH-SFEH-KHIVRACSFSEDTHLLLTGGM----EK-------ILRIFDLNRPDAPPR-EVDRSPGSVR 149 (349)
Q Consensus 84 ~i~vWd~~~~~~~~-~~~~-~~~v~~~~~s~~~~~l~s~~~----d~-------~i~lwd~~~~~~~~~-~~~~~~~~i~ 149 (349)
.+..||..+.+-.. .... .......+...++.+++.||. ++ .+..||+.+...... .+........
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 37888887765332 1111 111122223456777777873 11 156677654322100 1111011112
Q ss_pred EEEEecCCCeEEEEeeCC-------CeEEEEECCCCceEEeecCCCC--eeEEEEcCCCcEE-EEec------CCeEEEE
Q 018860 150 TVAWLHSDQTILSTCTDM-------GGVRLWDVRSGEIVQTLETKSP--VTSAEVSQDGRYI-TTAD------GSTVKFW 213 (349)
Q Consensus 150 ~~~~~~~~~~~l~~~~~d-------g~v~vwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~l-~~~~------d~~i~iw 213 (349)
++. . ++.+++.|+.+ ..+.+||+.+.+....-....+ -.++.. .+++++ .++. -..+.+|
T Consensus 105 ~~~-~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 105 LGE-V--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp EEE-E--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEE
T ss_pred eEE-E--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEE
Confidence 222 2 34444444432 3588999998876543222211 112222 345543 4432 1358899
Q ss_pred ecCCceeeEEEcCCCce--EEeeecCCCCCEEEEecCC-----CeEEEEeCCCCcEEEEecCCCc-ceeEEEEccCCCeE
Q 018860 214 DANHFGLVKSYNMPCTI--ESASLEPKYGNKFVAGGED-----MWVRFFDFHTGNEIACNKGHHG-PVHCVRFSPGGESY 285 (349)
Q Consensus 214 d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d-----~~i~v~d~~~~~~~~~~~~h~~-~i~~l~~sp~~~~l 285 (349)
|+.+..-...-..+... ..++.. ++..++.|+.+ ..+.+||..+.+-...-..-.. .-.+++ ..++.++
T Consensus 181 d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~i~ 257 (318)
T 2woz_A 181 NPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV-SLAGSLY 257 (318)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE-EETTEEE
T ss_pred cCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE-EECCEEE
Confidence 98876533332222211 122222 35677777643 3577899887654322110001 111222 2356666
Q ss_pred EEecCC
Q 018860 286 ASGSED 291 (349)
Q Consensus 286 ~sgs~D 291 (349)
+.|+.+
T Consensus 258 v~GG~~ 263 (318)
T 2woz_A 258 AIGGFA 263 (318)
T ss_dssp EECCBC
T ss_pred EECCee
Confidence 777654
No 327
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.11 E-value=1.5 Score=38.14 Aligned_cols=228 Identities=11% Similarity=0.048 Sum_probs=118.1
Q ss_pred CCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEE--EEec-----cCCeEEEEEEcCC----CCEEEEE--eCCCeEEE
Q 018860 62 GAVWSCCLDTNALRAASASADFSAKVWDALTGDVL--HSFE-----HKHIVRACSFSED----THLLLTG--GMEKILRI 128 (349)
Q Consensus 62 ~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~--~~~~-----~~~~v~~~~~s~~----~~~l~s~--~~d~~i~l 128 (349)
..-+.++|.+++..+++--..|.|++++..+++.. ..+. .......++|+|+ +.+.++- ..+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 34588999999987776655899999987666542 2221 2345789999995 4443432 23444555
Q ss_pred EECCCCC----C--CCc-ee---c-cCCCCeEEEEEecCCCeEEEEee------------CCCeEEEEECCCC-------
Q 018860 129 FDLNRPD----A--PPR-EV---D-RSPGSVRTVAWLHSDQTILSTCT------------DMGGVRLWDVRSG------- 178 (349)
Q Consensus 129 wd~~~~~----~--~~~-~~---~-~~~~~i~~~~~~~~~~~~l~~~~------------~dg~v~vwd~~~~------- 178 (349)
|.+...+ . ..+ .+ . ........+.|.+++..+++.+. ..|.|.-.+....
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 5554311 0 011 11 1 11112345788776655554442 1245555554321
Q ss_pred --ceEEeecCCCCeeEEEEcCCCcEEEEec--CC--eEEEEecCC--------c--------eeeEEEcCC-CceEEeee
Q 018860 179 --EIVQTLETKSPVTSAEVSQDGRYITTAD--GS--TVKFWDANH--------F--------GLVKSYNMP-CTIESASL 235 (349)
Q Consensus 179 --~~~~~~~~~~~v~~~~~~~~~~~l~~~~--d~--~i~iwd~~~--------~--------~~~~~~~~~-~~~~~~~~ 235 (349)
..+... .......++|.|++.+.++-. ++ .|.+..... + .++..+... .....++|
T Consensus 192 ~~~~i~a~-G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~ 270 (347)
T 3das_A 192 PGSPVYSY-GHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAY 270 (347)
T ss_dssp TTCCEEEB-CCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEE
T ss_pred CCCeEEee-CCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEE
Confidence 011111 122345788999888776532 32 233321110 0 011112111 12344455
Q ss_pred cCCCCCEEEEecCCCeEEEEeCCCCcE----EEEecCCCcceeEEEEccCCCeEEEe-cCCC
Q 018860 236 EPKYGNKFVAGGEDMWVRFFDFHTGNE----IACNKGHHGPVHCVRFSPGGESYASG-SEDG 292 (349)
Q Consensus 236 ~~~~~~~~~~~~~d~~i~v~d~~~~~~----~~~~~~h~~~i~~l~~sp~~~~l~sg-s~Dg 292 (349)
. .+..|...-..+.|..+.+..... ...+.+..+.+..|+..|+|.++++. ..||
T Consensus 271 ~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 271 A--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNTDG 330 (347)
T ss_dssp E--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTTSS
T ss_pred E--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCCCC
Confidence 4 245556555566676666654322 22344555789999999999866553 3444
No 328
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.05 E-value=1.8 Score=38.68 Aligned_cols=102 Identities=12% Similarity=0.085 Sum_probs=66.2
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEeecc----cCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCC-----------
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGH----KGAVWSCCLDTNALRAASASADFSAKVWDALTGD----------- 94 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~----------- 94 (349)
+|..|+.+ .++.||+=+......-+.++-. -..|..+..+|+|.+||..+ +..|.|-.+..+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 34444433 3355665554422223333332 12578899999999888876 5588999887332
Q ss_pred -EEEEec-------cCCeEEEEEEcCC---CCEEEEEeCCCeEEEEECCC
Q 018860 95 -VLHSFE-------HKHIVRACSFSED---THLLLTGGMEKILRIFDLNR 133 (349)
Q Consensus 95 -~~~~~~-------~~~~v~~~~~s~~---~~~l~s~~~d~~i~lwd~~~ 133 (349)
..+.+. ....|..+.|||- +..|++-..|+.||+||+..
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 112232 2457999999995 45788889999999999975
No 329
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=94.86 E-value=0.69 Score=40.17 Aligned_cols=16 Identities=6% Similarity=-0.085 Sum_probs=12.4
Q ss_pred CeEEEEECCCCceEEe
Q 018860 168 GGVRLWDVRSGEIVQT 183 (349)
Q Consensus 168 g~v~vwd~~~~~~~~~ 183 (349)
..+.+||+.+.+....
T Consensus 168 ~~v~~yd~~~~~W~~~ 183 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYA 183 (357)
T ss_dssp CEEEEEETTTTEEEEE
T ss_pred ccEEEEeCCCCcEEEC
Confidence 5799999998876543
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.78 E-value=1.3 Score=35.78 Aligned_cols=104 Identities=12% Similarity=0.013 Sum_probs=60.5
Q ss_pred CCeeEEEEcCCCcEEEEecCCeEEEEecCCceee------EEEcC-C-CceEEeeecCCCCCEEEEecCCCeEEEEeCCC
Q 018860 188 SPVTSAEVSQDGRYITTADGSTVKFWDANHFGLV------KSYNM-P-CTIESASLEPKYGNKFVAGGEDMWVRFFDFHT 259 (349)
Q Consensus 188 ~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~------~~~~~-~-~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~ 259 (349)
..+..++|+|++.+.+. .++.+.-.+..+.... +.+.. . .....+.|.|. +.++++ .|+.|+.++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~-G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPN-GYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTT-SCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCC-CCEEEe--CCCEEEEeCCCc
Confidence 36779999999987766 6777655555431111 11100 0 01355666663 555555 669998887643
Q ss_pred CcEEE-------EecCCCcceeEEEEccCCCeEEEecCCCCEEEe
Q 018860 260 GNEIA-------CNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 297 (349)
Q Consensus 260 ~~~~~-------~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW 297 (349)
...-. .-.+-=..+..|.|.|+|.+.+.. |+.++-+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 22111 111112467999999999766544 8876544
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.33 E-value=3.2 Score=39.87 Aligned_cols=191 Identities=7% Similarity=0.000 Sum_probs=95.6
Q ss_pred CccEEEEEecC----CCeEEEeCCCCCeEEEe-e-----cccC--CeEEEEECCCCCeeEEeeCCC------eEEEEECC
Q 018860 30 DGFFLISASKD----SSPMLRNGETGDWIGTF-E-----GHKG--AVWSCCLDTNALRAASASADF------SAKVWDAL 91 (349)
Q Consensus 30 ~~~~l~s~s~d----~~i~iw~~~~~~~~~~~-~-----~h~~--~v~~~~~~~~~~~l~s~s~D~------~i~vWd~~ 91 (349)
++..++.|+.+ ..+.+||..++++...- . .... .-.++.+..+++.++.||.++ .+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 45667777754 35667788777765432 1 1111 112233332666777777543 47788877
Q ss_pred CCCEEEE--eccCCeEEEEEEcCCCCEEEEEeCCC--eEEEEECCCCCCCCce----eccCCCCeEEEEEecCCCeEEEE
Q 018860 92 TGDVLHS--FEHKHIVRACSFSEDTHLLLTGGMEK--ILRIFDLNRPDAPPRE----VDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 92 ~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d~--~i~lwd~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
+..=... +..+..-.+++.-.++.+++.||.++ .+.+||+.+....... .........++.+....+.+++.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEE
Confidence 6532211 11111112333334778888887654 6888888654321111 11111112234444443555555
Q ss_pred eeC-------CCeEEEEECCCCc------eEEeec---CCCCeeEEEEcCCCcE-EEEec--------CCeEEEEecCCc
Q 018860 164 CTD-------MGGVRLWDVRSGE------IVQTLE---TKSPVTSAEVSQDGRY-ITTAD--------GSTVKFWDANHF 218 (349)
Q Consensus 164 ~~~-------dg~v~vwd~~~~~------~~~~~~---~~~~v~~~~~~~~~~~-l~~~~--------d~~i~iwd~~~~ 218 (349)
|+. .+.+.+||+.+.+ ...... ....-..+....++++ +.++. ...+.+||+.+.
T Consensus 557 GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 557 GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 543 2468999998887 322211 1111122333342454 44442 235889998876
Q ss_pred ee
Q 018860 219 GL 220 (349)
Q Consensus 219 ~~ 220 (349)
.-
T Consensus 637 ~W 638 (695)
T 2zwa_A 637 TL 638 (695)
T ss_dssp EE
T ss_pred eE
Confidence 43
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.68 E-value=0.42 Score=44.16 Aligned_cols=125 Identities=15% Similarity=0.130 Sum_probs=74.9
Q ss_pred eEEEEECCC----C-ceEEeecCCCCeeEEEEcCCCcEEEEec--CCeEEEEecCCcee-------------eEEEcCCC
Q 018860 169 GVRLWDVRS----G-EIVQTLETKSPVTSAEVSQDGRYITTAD--GSTVKFWDANHFGL-------------VKSYNMPC 228 (349)
Q Consensus 169 ~v~vwd~~~----~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~--d~~i~iwd~~~~~~-------------~~~~~~~~ 228 (349)
.|.+-|.+. + ....-++.......+.++|||+++.++. +.++.++|..+... ........
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 355666654 2 1222233333345678899999988765 78999999874211 11222334
Q ss_pred ceEEeeecCCCCCEEEEecCCCeEEEEeCCCC----------cEEEEecCCCcceeEEE-----EccCCCeEEEe---cC
Q 018860 229 TIESASLEPKYGNKFVAGGEDMWVRFFDFHTG----------NEIACNKGHHGPVHCVR-----FSPGGESYASG---SE 290 (349)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~----------~~~~~~~~h~~~i~~l~-----~sp~~~~l~sg---s~ 290 (349)
.+...+|.++ ++.+.+---|..|..|++... ..+..+.-|..+-.-.+ -.|+|++|++. |.
T Consensus 379 GPlHt~Fd~~-G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~sk 457 (638)
T 3sbq_A 379 GPLHTTFDGR-GNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSK 457 (638)
T ss_dssp CEEEEEECSS-SEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCT
T ss_pred cccEEEECCC-CceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEeccccc
Confidence 5677788874 655556668999999998653 34455555544322221 24788888875 45
Q ss_pred CCCE
Q 018860 291 DGTI 294 (349)
Q Consensus 291 Dg~v 294 (349)
|+.+
T Consensus 458 drfl 461 (638)
T 3sbq_A 458 DRFL 461 (638)
T ss_dssp TSSC
T ss_pred ccCc
Confidence 5544
No 333
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.68 E-value=3.3 Score=36.07 Aligned_cols=99 Identities=15% Similarity=0.115 Sum_probs=58.5
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCC-eEEEee---cccCCeEEEEECCC----CCeeEEeeC---C----
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGD-WIGTFE---GHKGAVWSCCLDTN----ALRAASASA---D---- 82 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~-~~~~~~---~h~~~v~~~~~~~~----~~~l~s~s~---D---- 82 (349)
....++|.| +|++++ +..++.|.+++. +++ .+..+. ........++++|+ +...++-+. +
T Consensus 30 ~P~~ia~~p---dG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 30 VPWSIAPLG---GGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CEEEEEEEE---TTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCeEEEEcC---CCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 356899997 787554 566788888863 443 222221 11245788999997 444444432 3
Q ss_pred CeEEEEECCCC--C-----EE-EEec--cCCeEEEEEEcCCCCEEEEEe
Q 018860 83 FSAKVWDALTG--D-----VL-HSFE--HKHIVRACSFSEDTHLLLTGG 121 (349)
Q Consensus 83 ~~i~vWd~~~~--~-----~~-~~~~--~~~~v~~~~~s~~~~~l~s~~ 121 (349)
..|..|+.... . .+ ..+. ..+....++|.|||.+.++-+
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 56777776543 1 11 1122 112346789999998777754
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.21 E-value=4.7 Score=36.48 Aligned_cols=51 Identities=10% Similarity=-0.023 Sum_probs=34.0
Q ss_pred CeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEE--Eec-------cCCeEEEEEEcCC
Q 018860 63 AVWSCCLDTNALRAASASADFSAKVWDALTGDVLH--SFE-------HKHIVRACSFSED 113 (349)
Q Consensus 63 ~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~--~~~-------~~~~v~~~~~s~~ 113 (349)
.-+.++|.+++..+++-...+.|++++..++.... .+. .......++|+|+
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 35789999999876665444578888866565422 222 1245678999995
No 335
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.90 E-value=3.1 Score=33.60 Aligned_cols=138 Identities=7% Similarity=-0.117 Sum_probs=71.4
Q ss_pred CeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEeccCCe--------EEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q 018860 63 AVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFEHKHI--------VRACSFSEDTHLLLTGGMEKILRIFDLNRP 134 (349)
Q Consensus 63 ~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~ 134 (349)
.+..++|+|++.+.+. .+|.+.--+..+.....-+..... ..++.|.|+|.+.++ .|+.|.-++..+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5779999999986665 566544444333211110111112 378899999998877 5588776664332
Q ss_pred CCCCceec-----c-CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce------EEeec-C-CCCeeEEEEcCCCc
Q 018860 135 DAPPREVD-----R-SPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEI------VQTLE-T-KSPVTSAEVSQDGR 200 (349)
Q Consensus 135 ~~~~~~~~-----~-~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~------~~~~~-~-~~~v~~~~~~~~~~ 200 (349)
........ . .=..+..+.+.|++ .|.+.. ++.+.-+...++.. ...+. . -.....+.+.+++.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCceeccccEeccCCCCceEEEEECCCc-eEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 22111111 0 11356777776655 444444 46654443332211 11111 1 12344566888887
Q ss_pred EEEEecCC
Q 018860 201 YITTADGS 208 (349)
Q Consensus 201 ~l~~~~d~ 208 (349)
+..+. ++
T Consensus 195 l~~v~-~g 201 (236)
T 1tl2_A 195 LFGVQ-GG 201 (236)
T ss_dssp EEEEE-TT
T ss_pred EEEEe-CC
Confidence 76666 44
No 336
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.61 E-value=4.6 Score=34.81 Aligned_cols=191 Identities=9% Similarity=0.131 Sum_probs=110.4
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCC-CCEEEEec-c----CC
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT-GDVLHSFE-H----KH 103 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~-~~~~~~~~-~----~~ 103 (349)
..+.||--. ..++.|++.++.+.++++.-...-|.-=.++++-.-|+| +..|.-|++.. ..+.+.|. | ..
T Consensus 77 ~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT---~taVyHWs~~~~s~P~kvFdR~~~L~~~ 152 (365)
T 2xzh_A 77 ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGC 152 (365)
T ss_dssp SSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEE---SSEEEEEESSTTCCCEEEEECCGGGTTC
T ss_pred CccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEc---CCcEEEEcccCCCCCceeeecchhcccc
Confidence 455555554 678999999998888888766554444444665555565 55899999874 34566665 3 23
Q ss_pred eEEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCCCCCceeccCCCCeEEEEEe--cCCCeEEEEeeC---CCeEE
Q 018860 104 IVRACSFSEDTHLLLTGGM-------EKILRIFDLNRPDAPPREVDRSPGSVRTVAWL--HSDQTILSTCTD---MGGVR 171 (349)
Q Consensus 104 ~v~~~~~s~~~~~l~s~~~-------d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~~~~~---dg~v~ 171 (349)
.|..-..+++.+.++..|- .|.+.||..+.. ....+.+|.+....+... +....+++-+.. -+.++
T Consensus 153 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 230 (365)
T 2xzh_A 153 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 230 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT--EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEE
T ss_pred eEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc--ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 5666677888887665442 377889998643 223445554333222111 111234433322 15788
Q ss_pred EEECCCC---ce-----EEee--cC---CCCeeEEEEcCCCcEE-EEecCCeEEEEecCCceeeEEEcC
Q 018860 172 LWDVRSG---EI-----VQTL--ET---KSPVTSAEVSQDGRYI-TTADGSTVKFWDANHFGLVKSYNM 226 (349)
Q Consensus 172 vwd~~~~---~~-----~~~~--~~---~~~v~~~~~~~~~~~l-~~~~d~~i~iwd~~~~~~~~~~~~ 226 (349)
+-++... .. ...+ +. ..--.++.+++.-.++ ....-|.+.+||+.++.++..-..
T Consensus 231 IiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI 299 (365)
T 2xzh_A 231 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 299 (365)
T ss_dssp EEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc
Confidence 8887432 10 1111 11 1112345555544443 445679999999999988765444
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.24 E-value=8.4 Score=36.97 Aligned_cols=189 Identities=11% Similarity=0.046 Sum_probs=91.8
Q ss_pred CCCCeeEEeeCC----CeEEEEECCCCCEEEEe--------ccCCeEEEEEEcC-CCCEEEEEeCCC------eEEEEEC
Q 018860 71 TNALRAASASAD----FSAKVWDALTGDVLHSF--------EHKHIVRACSFSE-DTHLLLTGGMEK------ILRIFDL 131 (349)
Q Consensus 71 ~~~~~l~s~s~D----~~i~vWd~~~~~~~~~~--------~~~~~v~~~~~s~-~~~~l~s~~~d~------~i~lwd~ 131 (349)
.++..++.||.+ ..+.++|..+++-...- ..+..-.+++..+ ++.+++.||.++ .+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 455566667653 35778888776432221 1111112233333 677777777542 4667787
Q ss_pred CCCCCCCceeccCCC--CeEEEEEecCCCeEEEEeeCCC--eEEEEECCCCceEEeec-----CC-CCeeEEEEcCC-Cc
Q 018860 132 NRPDAPPREVDRSPG--SVRTVAWLHSDQTILSTCTDMG--GVRLWDVRSGEIVQTLE-----TK-SPVTSAEVSQD-GR 200 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~l~~~~~dg--~v~vwd~~~~~~~~~~~-----~~-~~v~~~~~~~~-~~ 200 (349)
.+.... .+...+. .-.+++... ++.+++.|+.++ .+.+||+.+.++...-. .. .....+.+..+ ++
T Consensus 476 ~t~~W~--~~~~~p~~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 476 KTREWS--MIKSLSHTRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTEEE--ECCCCSBCCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred CCCcEE--ECCCCCCCcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 653211 1111111 111222222 444444444322 69999999887654322 11 11223444444 44
Q ss_pred EE-EEec--C-----CeEEEEecCCce------eeEEEcCC--Cce-EEeeecCCCCCEEEEecC--------CCeEEEE
Q 018860 201 YI-TTAD--G-----STVKFWDANHFG------LVKSYNMP--CTI-ESASLEPKYGNKFVAGGE--------DMWVRFF 255 (349)
Q Consensus 201 ~l-~~~~--d-----~~i~iwd~~~~~------~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~--------d~~i~v~ 255 (349)
++ .++. + ..+..||+.+.. -......+ ... ..+.... ++..++.||. ...+.+|
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT-PRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE-TTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC-CCEEEEECCccCCCCCCCCCeEEEE
Confidence 44 4443 2 358889987765 11111111 111 1222221 2567777774 3468999
Q ss_pred eCCCCcEE
Q 018860 256 DFHTGNEI 263 (349)
Q Consensus 256 d~~~~~~~ 263 (349)
|..+.+-.
T Consensus 632 d~~t~~W~ 639 (695)
T 2zwa_A 632 DPLSETLT 639 (695)
T ss_dssp ETTTTEEE
T ss_pred ECCCCeEE
Confidence 99876653
No 338
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.08 E-value=6.7 Score=35.46 Aligned_cols=101 Identities=12% Similarity=0.137 Sum_probs=58.0
Q ss_pred ceeeEEEeecCCCccEEEEEecCC-CeEEEeCCCCCe--EEEeec------ccCCeEEEEECCC----CCeeEEeeC---
Q 018860 18 PVVDLFYSPITPDGFFLISASKDS-SPMLRNGETGDW--IGTFEG------HKGAVWSCCLDTN----ALRAASASA--- 81 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~-~i~iw~~~~~~~--~~~~~~------h~~~v~~~~~~~~----~~~l~s~s~--- 81 (349)
....++|.| +|+++++ .+.+ .|.+++..++.. +..+.. .......++|+|+ +...++-+.
T Consensus 28 ~P~~~a~~p---dG~l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 28 KPHALLWGP---DNQIWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp SEEEEEECT---TSCEEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CceEEEEcC---CCcEEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 346899986 8886665 4554 677777555543 222221 2345678999984 544454432
Q ss_pred ---------CCeEEEEECCCC--C-----EEE-Eec--cCCeEEEEEEcCCCCEEEEEeC
Q 018860 82 ---------DFSAKVWDALTG--D-----VLH-SFE--HKHIVRACSFSEDTHLLLTGGM 122 (349)
Q Consensus 82 ---------D~~i~vWd~~~~--~-----~~~-~~~--~~~~v~~~~~s~~~~~l~s~~~ 122 (349)
...|.-|+...+ . .+. .+. ..+....++|.|||.+.++.+.
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 224444544322 1 111 122 1245789999999998887553
No 339
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.62 E-value=7.3 Score=35.01 Aligned_cols=191 Identities=9% Similarity=0.116 Sum_probs=114.9
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCC-CCEEEEec-c----CC
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALT-GDVLHSFE-H----KH 103 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~-~~~~~~~~-~----~~ 103 (349)
..+.||-- ...++.|++.++.+.++++.-....|.--.++++-.-|+| +..|.-|++.+ ..+.+.|. | ..
T Consensus 76 ~~~iiALr-ag~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lVT---~taVyHWsi~~~s~P~kvFdR~~~L~~~ 151 (494)
T 1bpo_A 76 ASKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGC 151 (494)
T ss_dssp SSSCEEEE-ETTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEEC---SSEEEEEESSSSCCCEEEEECCGGGTTC
T ss_pred CCcEEEEe-cCCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEEc---CCeeEEecccCCCCchhheecchhcccc
Confidence 34455544 3678999999998888888776666655556766555565 56899999864 34566665 3 23
Q ss_pred eEEEEEEcCCCCEEEEEe-------CCCeEEEEECCCCCCCCceeccCCCCeEEEEEe--cCCCeEEEEeeCC---CeEE
Q 018860 104 IVRACSFSEDTHLLLTGG-------MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWL--HSDQTILSTCTDM---GGVR 171 (349)
Q Consensus 104 ~v~~~~~s~~~~~l~s~~-------~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~~~~~d---g~v~ 171 (349)
.|..-..+++.+.++..| -.|.+.+|..... ....+.+|.+....+... +....+++-+... +.++
T Consensus 152 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 229 (494)
T 1bpo_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (494)
T ss_dssp EEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC--CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred eEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc--ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 566677788888776543 2477899998643 234455664443333211 1112344444332 6889
Q ss_pred EEECCCC---c-----eEEeecC-----CCCeeEEEEcCCCcEE-EEecCCeEEEEecCCceeeEEEcC
Q 018860 172 LWDVRSG---E-----IVQTLET-----KSPVTSAEVSQDGRYI-TTADGSTVKFWDANHFGLVKSYNM 226 (349)
Q Consensus 172 vwd~~~~---~-----~~~~~~~-----~~~v~~~~~~~~~~~l-~~~~d~~i~iwd~~~~~~~~~~~~ 226 (349)
+-++... . ....+.. ..--.++.+++.-.++ ....-|.+.+||+.++.++..-..
T Consensus 230 i~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI 298 (494)
T 1bpo_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 298 (494)
T ss_dssp EEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc
Confidence 9888432 1 1111111 1112355666654444 456679999999999988765443
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.49 E-value=19 Score=37.67 Aligned_cols=187 Identities=9% Similarity=0.122 Sum_probs=103.2
Q ss_pred ccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCC-CEEEEec-c----CCe
Q 018860 31 GFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFE-H----KHI 104 (349)
Q Consensus 31 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~-~~~~~~~-~----~~~ 104 (349)
.+.||-- ...++.|++.++...++++.-+...|.--.++++-.-|+| +..|..|++.+. .+++.|. | ...
T Consensus 77 ~~iiALr-ag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~Q 152 (1630)
T 1xi4_A 77 SKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQ 152 (1630)
T ss_pred cceEEEe-cCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEEc---CCeEEEeccCCCCccHHHHhcchhcccCe
Confidence 3444433 4678899998887777777665555554445666655666 557999999642 3444443 2 234
Q ss_pred EEEEEEcCCCCEEEEEe-------CCCeEEEEECCCCCCCCceeccCCCCeEEEEEe--cCCCeEEEEeeC---CCeEEE
Q 018860 105 VRACSFSEDTHLLLTGG-------MEKILRIFDLNRPDAPPREVDRSPGSVRTVAWL--HSDQTILSTCTD---MGGVRL 172 (349)
Q Consensus 105 v~~~~~s~~~~~l~s~~-------~d~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~l~~~~~---dg~v~v 172 (349)
|..-..+++.+.++..| -.|.+.+|++.... ...+.+|.+....+... +....+++.+.. -+.++|
T Consensus 153 IinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~--sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi 230 (1630)
T 1xi4_A 153 IINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 230 (1630)
T ss_pred eEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc--chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEE
Confidence 55566677777766443 34889999986433 23344444333222211 111223332221 167888
Q ss_pred EECCCC---c-eE----Eee--cC---CCCeeEEEEcCCCcEE-EEecCCeEEEEecCCceeeEE
Q 018860 173 WDVRSG---E-IV----QTL--ET---KSPVTSAEVSQDGRYI-TTADGSTVKFWDANHFGLVKS 223 (349)
Q Consensus 173 wd~~~~---~-~~----~~~--~~---~~~v~~~~~~~~~~~l-~~~~d~~i~iwd~~~~~~~~~ 223 (349)
-++... . .. ..+ +. ..--.++.+++.-.++ ....-|.+.++|+.++.++-.
T Consensus 231 ~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 231 IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 887432 1 10 001 10 0111244555543333 445678999999998876643
No 341
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.45 E-value=13 Score=35.85 Aligned_cols=264 Identities=11% Similarity=0.031 Sum_probs=142.0
Q ss_pred eeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEE
Q 018860 19 VVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVLHS 98 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~ 98 (349)
|.++...+ ++..|..|+. +-+..++..+++...........|.++..+.++.+.+ |..+ -+.+++..+++..+.
T Consensus 193 i~~i~~d~---~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 193 VNSLLEDT---TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTPLQHI 266 (758)
T ss_dssp EEEEEEET---TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSCCEEE
T ss_pred eEEEEEEC---CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCcEEEE
Confidence 66665543 4554555554 3466777766554322112234588888888886444 4444 477888776654332
Q ss_pred ec--------cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceec-------cCCCCeEEEEEecCCCeEEEE
Q 018860 99 FE--------HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVD-------RSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 99 ~~--------~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~~l~~ 163 (349)
.. ....|.++....+|.+-+ |+..| +.++.... . ..... .....|.++.-...+..++.+
T Consensus 267 ~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~~~~~-~--~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt 341 (758)
T 3ott_A 267 IHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLSRYNS-A--LQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG 341 (758)
T ss_dssp CCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEECCCC----CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE
T ss_pred EcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-ccccccCC-c--eeEEecccCCCCCCCceEEEEEEcCCCCEEEee
Confidence 21 124588888888777554 44456 44443221 1 11110 112357777655444444433
Q ss_pred eeCCCeEEEEECCCCce--EEeec--------CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEE--cC-----
Q 018860 164 CTDMGGVRLWDVRSGEI--VQTLE--------TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSY--NM----- 226 (349)
Q Consensus 164 ~~~dg~v~vwd~~~~~~--~~~~~--------~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~--~~----- 226 (349)
. +.+..++..+++. ...+. ....|.++...+++.+.++. ++-+..||..+.+..... ..
T Consensus 342 --~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~ 417 (758)
T 3ott_A 342 --A-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYN 417 (758)
T ss_dssp --T-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CB
T ss_pred --C-CcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCC
Confidence 3 4577777665321 11121 12347778777888877766 457889998776543321 11
Q ss_pred CCceEEeeecCCCCCEEEEecCCCeEEEEeCCC-----CcEEE---Ee---cC-CCcceeEEEEccCCCeEEE-ecCCCC
Q 018860 227 PCTIESASLEPKYGNKFVAGGEDMWVRFFDFHT-----GNEIA---CN---KG-HHGPVHCVRFSPGGESYAS-GSEDGT 293 (349)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~-----~~~~~---~~---~~-h~~~i~~l~~sp~~~~l~s-gs~Dg~ 293 (349)
...+.++... ....+..|+..+-+.++|..+ ..... .+ .+ ....|.++...++|.+.+. |+..|
T Consensus 418 ~~~v~~i~~d--~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~G- 494 (758)
T 3ott_A 418 TNWTYYIFED--TAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKG- 494 (758)
T ss_dssp SSSEEEEEEC--TTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSS-
T ss_pred CceEEEEEEc--CCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCC-
Confidence 1123344333 245566677666788887542 11111 11 11 1235889988888886653 44444
Q ss_pred EEEecCC
Q 018860 294 IRIWQTG 300 (349)
Q Consensus 294 v~vW~~~ 300 (349)
|..++..
T Consensus 495 l~~~d~~ 501 (758)
T 3ott_A 495 IDKINPR 501 (758)
T ss_dssp EEEEETT
T ss_pred cEEEeCC
Confidence 6666653
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.21 E-value=16 Score=35.16 Aligned_cols=264 Identities=10% Similarity=0.065 Sum_probs=137.7
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEE
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDALTGDVL 96 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~ 96 (349)
..|.++.-.. +| .|..|+.+| +..|+..+..+..........|.++.. .++ .|..+..+ -+..++..+++..
T Consensus 63 ~~i~~i~~d~---~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 63 TRIYCGVIID---NT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT 134 (758)
T ss_dssp SCEEEEEEET---TT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE
T ss_pred ceEEEEEEcC---CC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE
Confidence 4577765543 44 566677665 678887765443211112335776654 344 45555555 5778888776544
Q ss_pred EEec-----cCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCceecc----CCCCeEEEEEecCCCeEEEEeeCC
Q 018860 97 HSFE-----HKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREVDR----SPGSVRTVAWLHSDQTILSTCTDM 167 (349)
Q Consensus 97 ~~~~-----~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~l~~~~~d 167 (349)
.... ....|.++....++.+.+ |+.+| +..++............. ....|.++.....++.+.++. .
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt-~- 210 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT-E- 210 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE-E-
T ss_pred EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE-C-
Confidence 3311 134688888887887665 44444 667776432210000000 112377776555455433322 3
Q ss_pred CeEEEEECCCCceEEeec-CCCCeeEEEEcCCCcEEEEecCCeEEEEecCCceeeEEEcC-------C-CceEEeeecCC
Q 018860 168 GGVRLWDVRSGEIVQTLE-TKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGLVKSYNM-------P-CTIESASLEPK 238 (349)
Q Consensus 168 g~v~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~~~~~~~-------~-~~~~~~~~~~~ 238 (349)
+.+..+|..+++...... ....+.++...+++.+.++.. +-+.+++..+......... + ..+.++....
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~- 288 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQ- 288 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECT-
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcC-
Confidence 568889988765432111 123477777778888877764 4678888766543322111 1 1244444433
Q ss_pred CCCEEEEecCCCeEEEEeCCCCcEEEEe-----cCCCcceeEEEEccCCCeEEEecCCCCEEEec
Q 018860 239 YGNKFVAGGEDMWVRFFDFHTGNEIACN-----KGHHGPVHCVRFSPGGESYASGSEDGTIRIWQ 298 (349)
Q Consensus 239 ~~~~~~~~~~d~~i~v~d~~~~~~~~~~-----~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~ 298 (349)
.+. +-.|+..| +.++.....-..... ......|.++.-..+|.+.+ |+.+| +..++
T Consensus 289 ~g~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~ 349 (758)
T 3ott_A 289 EHN-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFT 349 (758)
T ss_dssp TCC-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEES
T ss_pred CCC-EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeec
Confidence 233 44555556 544433211111111 01234688888877776544 44555 33443
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.96 E-value=5.3 Score=37.07 Aligned_cols=108 Identities=13% Similarity=0.194 Sum_probs=64.5
Q ss_pred EEeccCCeEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCC-----CC--Cc-ee---ccCCCCeEEEEEecCCCeEEEEe
Q 018860 97 HSFEHKHIVRACSFSEDTHLLLTGG-MEKILRIFDLNRPD-----AP--PR-EV---DRSPGSVRTVAWLHSDQTILSTC 164 (349)
Q Consensus 97 ~~~~~~~~v~~~~~s~~~~~l~s~~-~d~~i~lwd~~~~~-----~~--~~-~~---~~~~~~i~~~~~~~~~~~~l~~~ 164 (349)
..+.-+.....+.++|||++++.++ -+.++-++|+..-. .. .+ .+ ....-...-.+|.+++ ....+.
T Consensus 317 ~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtl 395 (638)
T 3sbq_A 317 RYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTL 395 (638)
T ss_dssp EEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEE
T ss_pred EEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeee
Confidence 3344445556788999999987766 68999999986311 00 00 00 0112234566777654 666666
Q ss_pred eCCCeEEEEECCCC----------ceEEeecCCCCeeEEEE------cCCCcEEEEe
Q 018860 165 TDMGGVRLWDVRSG----------EIVQTLETKSPVTSAEV------SQDGRYITTA 205 (349)
Q Consensus 165 ~~dg~v~vwd~~~~----------~~~~~~~~~~~v~~~~~------~~~~~~l~~~ 205 (349)
--|.+|-.|++... ..+..+..+-..-.+.. .++|++|.+.
T Consensus 396 fidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 396 FIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp TTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred eecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 67789999998653 34455544333333322 4678887664
No 344
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.45 E-value=7.3 Score=38.97 Aligned_cols=38 Identities=21% Similarity=0.180 Sum_probs=32.3
Q ss_pred CeEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec
Q 018860 63 AVWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 63 ~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~ 100 (349)
.+.+++..++..+++|-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 35667777788899999999999999999999887753
No 345
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.32 E-value=2.3 Score=36.78 Aligned_cols=108 Identities=15% Similarity=0.192 Sum_probs=64.8
Q ss_pred EEEEeeCCCeEEEEECCCCceEEeecCC--CCeeEEEE---cCCCcEEEE--ecCCeEEEEecCCceeeEEEcCCCceEE
Q 018860 160 ILSTCTDMGGVRLWDVRSGEIVQTLETK--SPVTSAEV---SQDGRYITT--ADGSTVKFWDANHFGLVKSYNMPCTIES 232 (349)
Q Consensus 160 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~v~~~~~---~~~~~~l~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 232 (349)
++..++.||.|.-.|..+|+..=+++.. .+.....- ..++..++. ..||.|..++..++.....+..+..+..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 3445666799999999999877666543 22221110 013334433 3688898888877644433332211100
Q ss_pred --eeec--C--------CCCCEEEEecCCCeEEEEeCCCCcEEEEec
Q 018860 233 --ASLE--P--------KYGNKFVAGGEDMWVRFFDFHTGNEIACNK 267 (349)
Q Consensus 233 --~~~~--~--------~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~ 267 (349)
+... | ..+..+++|+.++.+...|..+|+.+-.+.
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1100 0 135678899999999999999999887664
No 346
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=86.22 E-value=16 Score=31.61 Aligned_cols=141 Identities=10% Similarity=0.008 Sum_probs=74.1
Q ss_pred eeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCe---EEEe----ecccCCeEEEEECCC----CCeeEEeeC------
Q 018860 19 VVDLFYSPITPDGFFLISASKDSSPMLRNGETGDW---IGTF----EGHKGAVWSCCLDTN----ALRAASASA------ 81 (349)
Q Consensus 19 v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~---~~~~----~~h~~~v~~~~~~~~----~~~l~s~s~------ 81 (349)
...++|.| +|++|+.+...+.|++++.. +.. +..+ .........++++|+ +...++-..
T Consensus 20 P~~i~~~p---dG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 20 PWALAFLP---DNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp EEEEEECS---TTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred cEEEEEcC---CCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 56889987 88834456678888888753 322 1111 112234678999995 544444332
Q ss_pred -CCeEEEEECCCC--CE--EE----Eecc----CCeEEEEEEcCCCCEEEEEeCC-------------CeEEEEECCCCC
Q 018860 82 -DFSAKVWDALTG--DV--LH----SFEH----KHIVRACSFSEDTHLLLTGGME-------------KILRIFDLNRPD 135 (349)
Q Consensus 82 -D~~i~vWd~~~~--~~--~~----~~~~----~~~v~~~~~s~~~~~l~s~~~d-------------~~i~lwd~~~~~ 135 (349)
...|..|+...+ .. .. .+.. .+.-..++|.|||.+.++-+.. +.|.-++.+..-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 234555555432 11 11 1111 1224579999999776665432 355555654210
Q ss_pred C-----------CCceeccCCCCeEEEEEecCCCeEEEE
Q 018860 136 A-----------PPREVDRSPGSVRTVAWLHSDQTILST 163 (349)
Q Consensus 136 ~-----------~~~~~~~~~~~i~~~~~~~~~~~~l~~ 163 (349)
. ....+.........++|.+..+.++++
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 0 111111111235678888856666654
No 347
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=79.62 E-value=26 Score=29.19 Aligned_cols=217 Identities=15% Similarity=0.077 Sum_probs=106.3
Q ss_pred CeEEEEECCCCCeeEEeeCCCeEEEEECCCC-CEEEEeccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECCCCCCCCcee
Q 018860 63 AVWSCCLDTNALRAASASADFSAKVWDALTG-DVLHSFEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLNRPDAPPREV 141 (349)
Q Consensus 63 ~v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~ 141 (349)
.|..++.......++ . |+.|..|-.+.. +.-........|..++.......++ . |+.+..|-.+.........
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCG
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCc
Confidence 466666655433333 3 889999975432 2111111223466666654443333 4 8999999866443322111
Q ss_pred ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCC-CceEEeecCCCCeeEEEEcCCCcEEEEecCCeEEEEecCCcee
Q 018860 142 DRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRS-GEIVQTLETKSPVTSAEVSQDGRYITTADGSTVKFWDANHFGL 220 (349)
Q Consensus 142 ~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~iwd~~~~~~ 220 (349)
. ....|..++.-. ...++. . +|.|..|=... +++-........+..+..-.+-. ++.. ++.|..|-.+....
T Consensus 99 ~-~~~~v~~ia~G~--~hs~al-~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~-~~l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 99 E-ARSGVDAIAAGA--WASYAL-K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA-LAVK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp G-GSSSEEEEEEET--TEEEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEEE-TTEEEEEECCTTST
T ss_pred c-cCCCeEEEECcC--CEEEEE-e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE-EEEE-CCEEEEecCCCCCC
Confidence 1 124577776432 222222 3 69999997643 22211112233465555443322 2233 68888886654322
Q ss_pred eE-EEcCCCceEEeeecCCCCCEEEEecCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEecCCCCEEEecC
Q 018860 221 VK-SYNMPCTIESASLEPKYGNKFVAGGEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQT 299 (349)
Q Consensus 221 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW~~ 299 (349)
+. .......+..++.- ....++. .|+.++.|=......+.....-...|..++..... .++.. ||.|..|=.
T Consensus 172 lg~p~~~~~~v~~i~~G--~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g~v~~wG~ 244 (282)
T 3qhy_B 172 TTVPAEAQSGVDDVAGG--IFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--NGKVIAWGS 244 (282)
T ss_dssp TSCCGGGGSSEEEEEEC--SSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--TTEEEEEST
T ss_pred CCCceecCCCeEEEEec--CCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--CCEEEEecC
Confidence 11 00111223333322 1233344 58889888655432221111112357777765433 33333 999999943
No 348
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.68 E-value=4.2 Score=41.57 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=30.9
Q ss_pred eEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec
Q 018860 64 VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 64 v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~ 100 (349)
+.+++..++..+++|-+.|+++|||++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4455666778899999999999999999999888753
No 349
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.36 E-value=9.6 Score=36.48 Aligned_cols=35 Identities=9% Similarity=0.240 Sum_probs=27.9
Q ss_pred eEEEEECCCCCeeEEeeCCCeEEEEECCCCCEEEEec
Q 018860 64 VWSCCLDTNALRAASASADFSAKVWDALTGDVLHSFE 100 (349)
Q Consensus 64 v~~~~~~~~~~~l~s~s~D~~i~vWd~~~~~~~~~~~ 100 (349)
|.++.+ +..+++|-+.|+++|+||+.+++++....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 444444 36799999999999999999998877654
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=56.11 E-value=16 Score=36.57 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=30.4
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEee
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE 58 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~ 58 (349)
.+.+++..+ +..++++-+.|+++|+|+..+++++.+..
T Consensus 237 ~~~~~~~~~---~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLS---TYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEET---TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecC---CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 344555543 67799999999999999999999988765
No 351
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=54.81 E-value=1.5e+02 Score=28.39 Aligned_cols=227 Identities=9% Similarity=0.013 Sum_probs=107.1
Q ss_pred CCccEEEEE-ecCC----CeEEEeCCCCCeEE-Eeec-ccC------CeEEEEECCCCCeeEEe----------eCCCeE
Q 018860 29 PDGFFLISA-SKDS----SPMLRNGETGDWIG-TFEG-HKG------AVWSCCLDTNALRAASA----------SADFSA 85 (349)
Q Consensus 29 ~~~~~l~s~-s~d~----~i~iw~~~~~~~~~-~~~~-h~~------~v~~~~~~~~~~~l~s~----------s~D~~i 85 (349)
|++++++.+ |..| +++++|.++++.+. .|.. -+. ....++|-.+...+++. +....|
T Consensus 139 ~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v 218 (711)
T 4hvt_A 139 QNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSL 218 (711)
T ss_dssp SSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEE
T ss_pred CCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEE
Confidence 477766555 3333 58899999887752 2220 000 00123554333333321 234679
Q ss_pred EEEECCCCC--EEEEec--cCCeEEEEEEcCCCC-----EEEEEeCC---CeEEEEECCCCCCCCceeccCCCCeEEEEE
Q 018860 86 KVWDALTGD--VLHSFE--HKHIVRACSFSEDTH-----LLLTGGME---KILRIFDLNRPDAPPREVDRSPGSVRTVAW 153 (349)
Q Consensus 86 ~vWd~~~~~--~~~~~~--~~~~v~~~~~s~~~~-----~l~s~~~d---~~i~lwd~~~~~~~~~~~~~~~~~i~~~~~ 153 (349)
+.|.+.+.. ....++ ....-.....++++. .+++.+.+ ..+.+.+...+......+. .+.... +..
T Consensus 219 ~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~-~~~ 296 (711)
T 4hvt_A 219 YIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKIN-MPSDAT-LQG 296 (711)
T ss_dssp EEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECC-SCTTCE-EEE
T ss_pred EEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEee-cCCcce-Eee
Confidence 999886642 233333 222223344566655 24544322 3344555543222111111 111111 222
Q ss_pred ecCCCeEEE-Eee---------CCCeEEEEECCCCc-------eEEe-ecCC--CCeeEEEEcCCCcEEEEecCC--eEE
Q 018860 154 LHSDQTILS-TCT---------DMGGVRLWDVRSGE-------IVQT-LETK--SPVTSAEVSQDGRYITTADGS--TVK 211 (349)
Q Consensus 154 ~~~~~~~l~-~~~---------~dg~v~vwd~~~~~-------~~~~-~~~~--~~v~~~~~~~~~~~l~~~~d~--~i~ 211 (349)
.+. +.+++ +-. ..+.|...|+.++. .... +... ..+..+.+..+..+++...++ .+.
T Consensus 297 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~ 375 (711)
T 4hvt_A 297 SFK-EYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKVV 375 (711)
T ss_dssp EET-TEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEEE
T ss_pred eEC-CEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEEE
Confidence 333 34433 211 35778888886531 1122 3332 246677777765444444554 477
Q ss_pred EEecCCce-eeEE-EcCC--CceEEeeecCCCCCEEEEec---CCCeEEEEeCC
Q 018860 212 FWDANHFG-LVKS-YNMP--CTIESASLEPKYGNKFVAGG---EDMWVRFFDFH 258 (349)
Q Consensus 212 iwd~~~~~-~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~---~d~~i~v~d~~ 258 (349)
++|+.++. ..+. +..+ ..+......+..+..+++.+ .-..+..+|+.
T Consensus 376 ~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 376 TFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 78775543 2222 3333 23333444444445555443 23578888876
No 352
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=54.04 E-value=97 Score=25.93 Aligned_cols=136 Identities=7% Similarity=0.024 Sum_probs=68.9
Q ss_pred EEecCCCeEEEEe---eCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEE-Eec-CCeEEEEecCCceeeEEEcC
Q 018860 152 AWLHSDQTILSTC---TDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYIT-TAD-GSTVKFWDANHFGLVKSYNM 226 (349)
Q Consensus 152 ~~~~~~~~~l~~~---~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-d~~i~iwd~~~~~~~~~~~~ 226 (349)
.|.+.++.+..+. .....|...++..... ..+.... + ..++++++.|. ++. ...|..-++......+.+..
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~-~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~ 185 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHY-L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC 185 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEESSC-C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeCCC-c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC
Confidence 4556667666554 3345677777654332 2232221 1 23566776654 433 46787778776554444332
Q ss_pred CCceEEeeecCCCCCEEEEecC--CCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEEEec--CCCCEEEecCC
Q 018860 227 PCTIESASLEPKYGNKFVAGGE--DMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYASGS--EDGTIRIWQTG 300 (349)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~--d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~sgs--~Dg~v~vW~~~ 300 (349)
+ . ...+.|. +..++.... ...|..-++..+... .+. +..+ ..|+|++.+|.-++ ..+.|..=+++
T Consensus 186 ~--~-~~~~~P~-g~~iy~t~~~~~~~I~~~~ldG~~~~-~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 186 N--C-YKPVVLD-DTNVYYMDVNRDNAIVHVNINNPNPV-VLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp C--E-EEEEEEE-TTEEEEEEGGGTTEEEEECSSSCCCE-ECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred C--c-cceeeec-CCEEEEEEcCCCcEEEEEECCCCCeE-EEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 2 1 2234565 555554432 247777777655432 232 1233 23777888776432 23344444443
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.85 E-value=22 Score=34.09 Aligned_cols=37 Identities=8% Similarity=0.116 Sum_probs=29.9
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeec
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEG 59 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~ 59 (349)
.|.++.+ +..+|++-+.|.++|+|+..++.++.+..-
T Consensus 223 ~Is~~~~-----~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF-----HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE-----TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc-----CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555544 356999999999999999999998887765
No 354
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=50.75 E-value=1.2e+02 Score=26.06 Aligned_cols=102 Identities=18% Similarity=0.162 Sum_probs=60.1
Q ss_pred CceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCe--EEEe----ecccCCeEEEEECCC----CCeeEEe--eCCCe
Q 018860 17 RPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDW--IGTF----EGHKGAVWSCCLDTN----ALRAASA--SADFS 84 (349)
Q Consensus 17 ~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~--~~~~----~~h~~~v~~~~~~~~----~~~l~s~--s~D~~ 84 (349)
.....++|.| +|..+++--..|.|++++..++.. +..+ .........++|+|+ +...++- ..+..
T Consensus 32 ~~P~~ia~~p---dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 32 NSPWGLAPLP---GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp SSEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCceEEEEcC---CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3457899987 888776554489998887665543 2222 112345788999985 5444432 23445
Q ss_pred EEEEECCCC----------CEE-EEec--cCCeEEEEEEcCCCCEEEEEe
Q 018860 85 AKVWDALTG----------DVL-HSFE--HKHIVRACSFSEDTHLLLTGG 121 (349)
Q Consensus 85 i~vWd~~~~----------~~~-~~~~--~~~~v~~~~~s~~~~~l~s~~ 121 (349)
|--|....+ +.+ ..+. ..+.-..++|.|||.+.++.+
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 555554431 111 1222 122346799999998888754
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=48.11 E-value=17 Score=37.10 Aligned_cols=29 Identities=21% Similarity=0.078 Sum_probs=26.4
Q ss_pred CccEEEEEecCCCeEEEeCCCCCeEEEee
Q 018860 30 DGFFLISASKDSSPMLRNGETGDWIGTFE 58 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~ 58 (349)
+..+|++-+.|+++|+|+..++.++.+..
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 67799999999999999999999988765
No 356
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=46.04 E-value=1.4e+02 Score=25.62 Aligned_cols=92 Identities=10% Similarity=-0.081 Sum_probs=45.1
Q ss_pred EEEEEecCCCeEEEeCCC--CCeEEEee-cccCCeEEEEECC--CCCeeEEeeCCC----eEEEEECCCCCEEEEecc--
Q 018860 33 FLISASKDSSPMLRNGET--GDWIGTFE-GHKGAVWSCCLDT--NALRAASASADF----SAKVWDALTGDVLHSFEH-- 101 (349)
Q Consensus 33 ~l~s~s~d~~i~iw~~~~--~~~~~~~~-~h~~~v~~~~~~~--~~~~l~s~s~D~----~i~vWd~~~~~~~~~~~~-- 101 (349)
.|..|+..| +.++.... ..+...-. .-...|.+++++| .+. |..+...+ .|... ...|+....+..
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~-l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPER-MLMAARTGHLGPTVFRS-DDGGGNWTEATRPP 100 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTC-EEEEEEC--CCEEEEEE-SSTTSCCEECSBCC
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCe-EEEEecCCCCCccEEEe-CCCCCCceECCccc
Confidence 566677777 44443322 23432211 2234689999998 444 44444444 33322 233443222211
Q ss_pred -------------CCeEEEEEEcCC--CCEEEEEeCCCeEE
Q 018860 102 -------------KHIVRACSFSED--THLLLTGGMEKILR 127 (349)
Q Consensus 102 -------------~~~v~~~~~s~~--~~~l~s~~~d~~i~ 127 (349)
...|.++++.|. ...+..++..+.|.
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~ 141 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLF 141 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEE
Confidence 125778889862 45555555555443
No 357
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=44.13 E-value=1.6e+02 Score=25.66 Aligned_cols=135 Identities=8% Similarity=0.052 Sum_probs=79.0
Q ss_pred CeEEEeCCCC--CeEEEeecc------cCCeEEEEEC-C-------CCCeeEEeeCCCeEEEEECCCCCEEEEec---c-
Q 018860 42 SPMLRNGETG--DWIGTFEGH------KGAVWSCCLD-T-------NALRAASASADFSAKVWDALTGDVLHSFE---H- 101 (349)
Q Consensus 42 ~i~iw~~~~~--~~~~~~~~h------~~~v~~~~~~-~-------~~~~l~s~s~D~~i~vWd~~~~~~~~~~~---~- 101 (349)
.+.+||+.+. +.++.+.-. ...+..+.++ . ++...+|=+....|-|+|+.+++..+... +
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 3567888888 888877642 2336677777 2 12233444457788899999887655442 0
Q ss_pred ---------------CCeEEEEEEcCC----CCEEEEEeCCCeEEEEECCC-----CC--CCCceeccC--CCCeEEEEE
Q 018860 102 ---------------KHIVRACSFSED----THLLLTGGMEKILRIFDLNR-----PD--APPREVDRS--PGSVRTVAW 153 (349)
Q Consensus 102 ---------------~~~v~~~~~s~~----~~~l~s~~~d~~i~lwd~~~-----~~--~~~~~~~~~--~~~i~~~~~ 153 (349)
...+..++++|+ ++.|.-....+. ++|.+.+ .. ...+.+... ......++.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 125778899987 666655443332 5555431 11 111111111 122333444
Q ss_pred ecCCCeEEEEeeCCCeEEEEECCC
Q 018860 154 LHSDQTILSTCTDMGGVRLWDVRS 177 (349)
Q Consensus 154 ~~~~~~~l~~~~~dg~v~vwd~~~ 177 (349)
.+..+.++.+--..+.|..|+..+
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTS
T ss_pred eCCCCeEEEEeccCCeEEEEeCCC
Confidence 346677777777778999999875
No 358
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.52 E-value=1.2e+02 Score=28.33 Aligned_cols=57 Identities=19% Similarity=0.103 Sum_probs=39.1
Q ss_pred EEEEECCCCCeeE-EeeC-----------CCeEEEEECCCCCEEEEecc--CCeEEEEEEcCCCCEEEEEe
Q 018860 65 WSCCLDTNALRAA-SASA-----------DFSAKVWDALTGDVLHSFEH--KHIVRACSFSEDTHLLLTGG 121 (349)
Q Consensus 65 ~~~~~~~~~~~l~-s~s~-----------D~~i~vWd~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~ 121 (349)
-.|.|+++|.+.+ |=+. ...+...+..+++....+.. ...++.++|+||++.|+.+-
T Consensus 479 DnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4678999988666 3211 11455666667877666543 35689999999999888764
No 359
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=40.14 E-value=1.3e+02 Score=28.12 Aligned_cols=55 Identities=22% Similarity=0.164 Sum_probs=36.9
Q ss_pred EEEECCCCCeeEEeeCC------------CeEEEEECCCCCEEEEec--cCCeEEEEEEcCCCCEEEEE
Q 018860 66 SCCLDTNALRAASASAD------------FSAKVWDALTGDVLHSFE--HKHIVRACSFSEDTHLLLTG 120 (349)
Q Consensus 66 ~~~~~~~~~~l~s~s~D------------~~i~vWd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~ 120 (349)
-|+|++.|.+++.-..+ ..+.+.+..+++..+.+. ....++.++|+||++.|+..
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 46899998855543222 124445666777666554 34579999999999888764
No 360
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=39.32 E-value=2.6e+02 Score=26.70 Aligned_cols=229 Identities=13% Similarity=0.085 Sum_probs=107.3
Q ss_pred EECCCCCeeEE-----eeCCCeEEEEECCCCCEEE-Eecc--CC------eEEEEEEcCCCCEEEEE----------eCC
Q 018860 68 CLDTNALRAAS-----ASADFSAKVWDALTGDVLH-SFEH--KH------IVRACSFSEDTHLLLTG----------GME 123 (349)
Q Consensus 68 ~~~~~~~~l~s-----~s~D~~i~vWd~~~~~~~~-~~~~--~~------~v~~~~~s~~~~~l~s~----------~~d 123 (349)
++++++++++- |+.-..||++|+.+++.+. .|.. +. ....++|..+..++++. +.-
T Consensus 136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 37888887652 2334469999999987653 1220 00 01233665333333321 223
Q ss_pred CeEEEEECCCCCCCCc-eeccCCCCeE-EEEEecCCCe----EEEEee-C--CCeEEEEECCC--CceEEeecCCCCeeE
Q 018860 124 KILRIFDLNRPDAPPR-EVDRSPGSVR-TVAWLHSDQT----ILSTCT-D--MGGVRLWDVRS--GEIVQTLETKSPVTS 192 (349)
Q Consensus 124 ~~i~lwd~~~~~~~~~-~~~~~~~~i~-~~~~~~~~~~----~l~~~~-~--dg~v~vwd~~~--~~~~~~~~~~~~v~~ 192 (349)
.+++.|.+.++...-. .+......+. .....++.+. ++++.+ + ...+.+.|... ++. ..+.......
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~- 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINMPSDAT- 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCSCTTCE-
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeecCCcce-
Confidence 6688898876533222 2333223332 2223333332 344333 2 13455666543 332 2232222211
Q ss_pred EEEcCCCcEEEEe-----------cCCeEEEEecCCce-------eeEE-EcC--CCceEEeeecCCCCCEEEEecCCC-
Q 018860 193 AEVSQDGRYITTA-----------DGSTVKFWDANHFG-------LVKS-YNM--PCTIESASLEPKYGNKFVAGGEDM- 250 (349)
Q Consensus 193 ~~~~~~~~~l~~~-----------~d~~i~iwd~~~~~-------~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~d~- 250 (349)
+..+.++.+++.. ..+.|...|+.+.. ..+. +.. ...+..+.+.. +..+++...++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~l~~~~~~~~~ 371 (711)
T 4hvt_A 294 LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK--DRVFLATYDNVV 371 (711)
T ss_dssp EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS--SCEEEEEEETTE
T ss_pred EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC--CEEEEEEEECCE
Confidence 2233455544321 24567778876531 1111 222 22344555553 46667766666
Q ss_pred -eEEEEeCCCCc-EEEE-ec-CCCcceeEEEEccCCCe-EEEec---CCCCEEEecCC
Q 018860 251 -WVRFFDFHTGN-EIAC-NK-GHHGPVHCVRFSPGGES-YASGS---EDGTIRIWQTG 300 (349)
Q Consensus 251 -~i~v~d~~~~~-~~~~-~~-~h~~~i~~l~~sp~~~~-l~sgs---~Dg~v~vW~~~ 300 (349)
.++++++.+++ .... +. ...+.+....+++++.. +++.+ .-+.+..++..
T Consensus 372 ~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 372 AKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 46777766554 1222 21 11245666666676654 33333 23456666653
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=37.12 E-value=1.7e+02 Score=23.97 Aligned_cols=9 Identities=22% Similarity=0.435 Sum_probs=4.8
Q ss_pred CCeEEEEEC
Q 018860 82 DFSAKVWDA 90 (349)
Q Consensus 82 D~~i~vWd~ 90 (349)
||.|..|-.
T Consensus 119 ~G~v~~wG~ 127 (282)
T 3qhy_B 119 DGKVIAWGD 127 (282)
T ss_dssp TTEEEEEEC
T ss_pred CCeEEEecC
Confidence 555555543
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=36.29 E-value=1.2e+02 Score=28.23 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=36.0
Q ss_pred eEEEeecCCCccEEEEEecC------------CCeEEEeCCCCCeEEEeeccc-CCeEEEEECCCCCeeEE
Q 018860 21 DLFYSPITPDGFFLISASKD------------SSPMLRNGETGDWIGTFEGHK-GAVWSCCLDTNALRAAS 78 (349)
Q Consensus 21 ~~~fs~~~~~~~~l~s~s~d------------~~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s 78 (349)
-|.|+| .|.+++.--.+ ..+.+.+..+++..+-+.++. ..++.++|+||++.|+.
T Consensus 480 NL~fd~---~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 480 GLGFDK---AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEECT---TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred ceEECC---CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 467776 67755543222 123344566778777777765 56899999999887664
No 363
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=33.56 E-value=2.2e+02 Score=24.11 Aligned_cols=102 Identities=11% Similarity=0.032 Sum_probs=61.9
Q ss_pred CccEEEEEecCCCeEEEeCCCCC-------eEEEeecccCCeEEEEECCCCCeeEEeeCCCeEEEEECC--CCC------
Q 018860 30 DGFFLISASKDSSPMLRNGETGD-------WIGTFEGHKGAVWSCCLDTNALRAASASADFSAKVWDAL--TGD------ 94 (349)
Q Consensus 30 ~~~~l~s~s~d~~i~iw~~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vWd~~--~~~------ 94 (349)
+..+++.++.+|-++.-...... ....++.. +.+..+........|+-.+..|.+..+.+. .-.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 46789999999999877643221 11223333 334444443444567777788887777766 211
Q ss_pred -EEEE--eccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECC
Q 018860 95 -VLHS--FEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN 132 (349)
Q Consensus 95 -~~~~--~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~ 132 (349)
-+.. +.....|.++...+++..++..+..|.++.-.+.
T Consensus 187 ~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 187 SGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp BCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 1111 2234456665555566788889999999887764
No 364
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=32.50 E-value=2.2e+02 Score=23.71 Aligned_cols=207 Identities=8% Similarity=-0.046 Sum_probs=103.7
Q ss_pred EECCCCCeeEEeeC--------------CCeEEEEECCCCCEEEEeccCCeEEEEEEcCCCCEEEEEe--CCCeEEEEEC
Q 018860 68 CLDTNALRAASASA--------------DFSAKVWDALTGDVLHSFEHKHIVRACSFSEDTHLLLTGG--MEKILRIFDL 131 (349)
Q Consensus 68 ~~~~~~~~l~s~s~--------------D~~i~vWd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~--~d~~i~lwd~ 131 (349)
-+++++.+|.=++. +..|+..++.+++........ ...|+++++.|+=.. .++.-.||.+
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 44667776665443 346788888776533322221 225677888877554 3344444444
Q ss_pred CCCCCCCceeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceEEeecCCCCeeEEEEcCCCcEEEEe-c--CC
Q 018860 132 NRPDAPPREVDRSPGSVRTVAWLHSDQTILSTCTDMGGVRLWDVRSGEIVQTLETKSPVTSAEVSQDGRYITTA-D--GS 208 (349)
Q Consensus 132 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~--d~ 208 (349)
.......+.+..+.. ..+.+.++.+..+.....+|.+-++..+.....+.. +.. ..+.|++.+|.=. . +.
T Consensus 135 ~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--~~~-~~~~P~g~~iy~t~~~~~~ 207 (302)
T 3s25_A 135 RIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--NCY-KPVVLDDTNVYYMDVNRDN 207 (302)
T ss_dssp ETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--CEE-EEEEEETTEEEEEEGGGTT
T ss_pred ECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--Ccc-ceeeecCCEEEEEEcCCCc
Confidence 333333333333322 233455677776665567888888876554333332 222 2355887776432 2 23
Q ss_pred eEEEEecCCceeeEEEcCCCceEEeeecCCCCCEEEEe--cCCCeEEEEeCCCCcEEEEecCCCcceeEEEEccCCCeEE
Q 018860 209 TVKFWDANHFGLVKSYNMPCTIESASLEPKYGNKFVAG--GEDMWVRFFDFHTGNEIACNKGHHGPVHCVRFSPGGESYA 286 (349)
Q Consensus 209 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~~i~v~d~~~~~~~~~~~~h~~~i~~l~~sp~~~~l~ 286 (349)
.|..-++....... +. ..... .+.|. ++.++.+ +....|..-++..........+ .+. ++++.+.+|+
T Consensus 208 ~I~~~~ldG~~~~~-Lt-~~~~~--~~~~~-g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~---~~~--~i~i~~d~Iy 277 (302)
T 3s25_A 208 AIVHVNINNPNPVV-LT-EANIE--HYNVY-GSLIFYQRGGDNPALCVVKNDGTGFKELAKG---EFC--NINVTSQYVY 277 (302)
T ss_dssp EEEEECSSSCCCEE-CS-CSCEE--EEEEE-TTEEEEEECSSSCEEEEEETTSCCCEEEEES---CEE--EEEECSSEEE
T ss_pred EEEEEECCCCCeEE-Ee-CCCcc--eEEEC-CCEEEEEECCCCcEEEEEECCCCccEEeeCC---ccc--eEEEeCCEEE
Confidence 55555555443222 21 11222 25554 4555543 3346777777764433222222 233 3455566654
Q ss_pred -EecCCCCEE
Q 018860 287 -SGSEDGTIR 295 (349)
Q Consensus 287 -sgs~Dg~v~ 295 (349)
+--..+.|.
T Consensus 278 ~td~~~~~i~ 287 (302)
T 3s25_A 278 FTDFVSNKEY 287 (302)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCeEE
Confidence 433444433
No 365
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=31.50 E-value=3.6e+02 Score=26.01 Aligned_cols=145 Identities=15% Similarity=0.128 Sum_probs=70.2
Q ss_pred CCceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEeec------ccCCeEEEEECCCC-CeeEEeeCCCe----
Q 018860 16 SRPVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFEG------HKGAVWSCCLDTNA-LRAASASADFS---- 84 (349)
Q Consensus 16 ~~~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~------h~~~v~~~~~~~~~-~~l~s~s~D~~---- 84 (349)
.+.|.+|+|+|.+++ .+..++..+.+....-....+...... ....|.++++++.. ..+..+..+..
T Consensus 14 ~g~i~~i~~~p~~~~--~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVAHPKTKD--LLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEECSSSTT--CEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEECCCCCC--EEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 357999999986554 455666666655544332334432221 13469999998742 33333322211
Q ss_pred EEEE-ECCCCCEEEEeccC----------CeEEEEEEcCC-CCEEEEEeCCCeEEEEECCCCCCCCceecc------CCC
Q 018860 85 AKVW-DALTGDVLHSFEHK----------HIVRACSFSED-THLLLTGGMEKILRIFDLNRPDAPPREVDR------SPG 146 (349)
Q Consensus 85 i~vW-d~~~~~~~~~~~~~----------~~v~~~~~s~~-~~~l~s~~~d~~i~lwd~~~~~~~~~~~~~------~~~ 146 (349)
-.|| ....|+.-..+..+ ..+..++++|. .+.+..+...+. +|.-.........+.. ...
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTT
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCC
Confidence 2334 34455544433211 12456777774 345555553332 3332222211111111 123
Q ss_pred CeEEEEEecCCC-eEEEEe
Q 018860 147 SVRTVAWLHSDQ-TILSTC 164 (349)
Q Consensus 147 ~i~~~~~~~~~~-~~l~~~ 164 (349)
.+..+.+.|.+. .+++..
T Consensus 170 ~~~~i~~~p~~~~~~~~~~ 188 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASA 188 (789)
T ss_dssp CEEEEEECTTSTTCEEEEE
T ss_pred CeEEEEECCCCCCEEEEEE
Confidence 577788777554 444433
No 366
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=28.00 E-value=1.5e+02 Score=26.89 Aligned_cols=55 Identities=11% Similarity=0.026 Sum_probs=36.5
Q ss_pred EEEEecCCCeEEEEeCCCCc--------EEEEec--CCCcceeEEEEccCCCeEEEecCCCCEEE
Q 018860 242 KFVAGGEDMWVRFFDFHTGN--------EIACNK--GHHGPVHCVRFSPGGESYASGSEDGTIRI 296 (349)
Q Consensus 242 ~~~~~~~d~~i~v~d~~~~~--------~~~~~~--~h~~~i~~l~~sp~~~~l~sgs~Dg~v~v 296 (349)
.++.|+.+|.|.-.-+.... .+..+. ....+|..|.++++..+|+.++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 35678888877555443211 112222 23578999999999999999999887766
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=26.28 E-value=3.2e+02 Score=23.74 Aligned_cols=133 Identities=8% Similarity=0.039 Sum_probs=69.0
Q ss_pred eEEEEECCCC--ceEEeecCC-------CCeeEEEEc---CC----CcEEEEe--cCCeEEEEecCCceeeEEEcC---C
Q 018860 169 GVRLWDVRSG--EIVQTLETK-------SPVTSAEVS---QD----GRYITTA--DGSTVKFWDANHFGLVKSYNM---P 227 (349)
Q Consensus 169 ~v~vwd~~~~--~~~~~~~~~-------~~v~~~~~~---~~----~~~l~~~--~d~~i~iwd~~~~~~~~~~~~---~ 227 (349)
+|.+||++++ +.++.+... +.+..+.+. |. +.++..+ ....|.++|+.+++.-+.... +
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6778899888 887776432 235666666 22 3344333 367899999988765554421 1
Q ss_pred ----------------CceEEeeecCCC---CCEEEEec-CCCeEEEEeC---CCC---cEEEEe--cCCCcceeEEEEc
Q 018860 228 ----------------CTIESASLEPKY---GNKFVAGG-EDMWVRFFDF---HTG---NEIACN--KGHHGPVHCVRFS 279 (349)
Q Consensus 228 ----------------~~~~~~~~~~~~---~~~~~~~~-~d~~i~v~d~---~~~---~~~~~~--~~h~~~i~~l~~s 279 (349)
..+..++++|.. ++.|+... ....++...+ +.. ..+..+ ++-...-..+++.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 123344455431 22232222 2222222221 111 111111 1111223456675
Q ss_pred -cCCCeEEEecCCCCEEEecCCC
Q 018860 280 -PGGESYASGSEDGTIRIWQTGP 301 (349)
Q Consensus 280 -p~~~~l~sgs~Dg~v~vW~~~~ 301 (349)
.+|.++++--....|..|++..
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCCeEEEEeccCCeEEEEeCCC
Confidence 5677777777888899999864
No 368
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=25.70 E-value=4.4e+02 Score=25.10 Aligned_cols=102 Identities=11% Similarity=0.093 Sum_probs=52.9
Q ss_pred ceeeEEEeecCCCccEEEEEecCCCeEEEeCCCCCeEEEee--c----ccCCeEEEEECCC-C-CeeEEeeC-C-----C
Q 018860 18 PVVDLFYSPITPDGFFLISASKDSSPMLRNGETGDWIGTFE--G----HKGAVWSCCLDTN-A-LRAASASA-D-----F 83 (349)
Q Consensus 18 ~v~~~~fs~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~--~----h~~~v~~~~~~~~-~-~~l~s~s~-D-----~ 83 (349)
.|..|+|+|.+++ .|..+...+.+....-....+..... + ....|.+++++|. . ..++..+. . +
T Consensus 24 ~i~~i~~~p~~~~--~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 24 FMPGIVFNETEKD--LIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp CCCEEEECSSSTT--CEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred eeeEEEECCCCCC--EEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 6899999986553 45556655665555433334444322 1 1245899999873 2 33333321 1 1
Q ss_pred eEEEEE-CCCCCEEEEeccC----------CeEEEEEEcCC-CCEEEEEe
Q 018860 84 SAKVWD-ALTGDVLHSFEHK----------HIVRACSFSED-THLLLTGG 121 (349)
Q Consensus 84 ~i~vWd-~~~~~~~~~~~~~----------~~v~~~~~s~~-~~~l~s~~ 121 (349)
...||. ...|+.-..+... ..+..++++|. .+.+..+.
T Consensus 102 ~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 102 MGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred CccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 244554 3344433222210 12467888884 35566655
No 369
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.23 E-value=3.5e+02 Score=23.07 Aligned_cols=61 Identities=7% Similarity=-0.108 Sum_probs=32.4
Q ss_pred CeEEEEECCC--CCeeEEeeCCCeEEEEECCCCCEEEEec--------------------cCCeEEEEEEcCC-CCEEEE
Q 018860 63 AVWSCCLDTN--ALRAASASADFSAKVWDALTGDVLHSFE--------------------HKHIVRACSFSED-THLLLT 119 (349)
Q Consensus 63 ~v~~~~~~~~--~~~l~s~s~D~~i~vWd~~~~~~~~~~~--------------------~~~~v~~~~~s~~-~~~l~s 119 (349)
.|.++++++. ...|..+...+.|...+ ..|+....+. ....+.++.+.|. ...|..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 4778899862 44555555555544332 2344333221 1235789999873 344444
Q ss_pred EeCCC
Q 018860 120 GGMEK 124 (349)
Q Consensus 120 ~~~d~ 124 (349)
+..++
T Consensus 195 g~~~g 199 (394)
T 3b7f_A 195 GMSSG 199 (394)
T ss_dssp EEETB
T ss_pred EECCC
Confidence 44344
No 370
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=22.53 E-value=2.6e+02 Score=26.10 Aligned_cols=56 Identities=4% Similarity=-0.113 Sum_probs=37.7
Q ss_pred EEEEecCCCeEEEEeCCC-C----c-EEEEec--CCCcceeEEEEccCCCeEEEecCCCCEEEe
Q 018860 242 KFVAGGEDMWVRFFDFHT-G----N-EIACNK--GHHGPVHCVRFSPGGESYASGSEDGTIRIW 297 (349)
Q Consensus 242 ~~~~~~~d~~i~v~d~~~-~----~-~~~~~~--~h~~~i~~l~~sp~~~~l~sgs~Dg~v~vW 297 (349)
.++.|+++|.|.-.-... + . .+..+. ....+|..|.++++...|..++.++.++|-
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 456788888776543322 2 1 122222 245789999999999999999998887775
No 371
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=22.43 E-value=3.4e+02 Score=22.64 Aligned_cols=184 Identities=14% Similarity=0.097 Sum_probs=94.9
Q ss_pred CCCeeEEeeCCCeEEEEECCCCCE-------EEE--eccCCeEEEEEEcCCCCEEEEEeCCCeEEEEECC---CCC----
Q 018860 72 NALRAASASADFSAKVWDALTGDV-------LHS--FEHKHIVRACSFSEDTHLLLTGGMEKILRIFDLN---RPD---- 135 (349)
Q Consensus 72 ~~~~l~s~s~D~~i~vWd~~~~~~-------~~~--~~~~~~v~~~~~s~~~~~l~s~~~d~~i~lwd~~---~~~---- 135 (349)
+..++++.+.+|.||--.+..... +.. +.....+..+........++..+..|.++-+... ...
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~ 86 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASK 86 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC------
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCC
Confidence 445678888888888776543211 111 1223344444444445566667778876655542 110
Q ss_pred -CC---CceeccCCCCeEEEEEec---CCCeEEEEeeCCCeEEEEECCC-------CceEEeecCCCCeeEEEE-cCCCc
Q 018860 136 -AP---PREVDRSPGSVRTVAWLH---SDQTILSTCTDMGGVRLWDVRS-------GEIVQTLETKSPVTSAEV-SQDGR 200 (349)
Q Consensus 136 -~~---~~~~~~~~~~i~~~~~~~---~~~~~l~~~~~dg~v~vwd~~~-------~~~~~~~~~~~~v~~~~~-~~~~~ 200 (349)
.+ ...+. ....+.++...+ .+..++ ..+..|.++.-.+.. |.....+.....+..+.. .++..
T Consensus 87 G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll-~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 87 GQNISELINLG-DQEEILTIKNSKDLTDDAYLL-LTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEK 164 (312)
T ss_dssp -CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEE-EEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCE
T ss_pred CcChhhccCCC-CCCEEEEEEEeccCCCCCEEE-EEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCE
Confidence 00 00111 123455554333 234444 456679988887632 222233333444444443 44556
Q ss_pred EEEEecCCeEEEEecCCcee-------eEEEcC--CCceEEeeecCCCCCEEEEecCCCeEEEEeCC
Q 018860 201 YITTADGSTVKFWDANHFGL-------VKSYNM--PCTIESASLEPKYGNKFVAGGEDMWVRFFDFH 258 (349)
Q Consensus 201 ~l~~~~d~~i~iwd~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~i~v~d~~ 258 (349)
++..+.+|.+..+....... ++.+.. ...+..+.... .+..+++.+..|....+.+.
T Consensus 165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~-~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVK-ENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECT-TCSEEEEEETTSEEEEEEGG
T ss_pred EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEEC-CCCeEEEEECCCceEEEEHH
Confidence 77778888887777643211 111222 23344443332 35567888888888888764
No 372
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=21.83 E-value=4.9e+02 Score=24.24 Aligned_cols=58 Identities=19% Similarity=0.133 Sum_probs=38.2
Q ss_pred CeEEEEEecCCCeEEEEeeC-----------CCeEEEEECCCCceEEeecC--CCCeeEEEEcCCCcEEEE
Q 018860 147 SVRTVAWLHSDQTILSTCTD-----------MGGVRLWDVRSGEIVQTLET--KSPVTSAEVSQDGRYITT 204 (349)
Q Consensus 147 ~i~~~~~~~~~~~~l~~~~~-----------dg~v~vwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~ 204 (349)
....+.|.+.+..+|.+-.. .+.|..++..+++....+.. ....+.++|+||++.|..
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEE
Confidence 45678887776666645321 12677778877876555543 346789999999987654
Done!