Query 018864
Match_columns 349
No_of_seqs 157 out of 366
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 07:14:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4am5_A Bacterioferritin; metal 58.0 3.7 0.00013 34.2 1.5 121 118-293 10-134 (159)
2 3k6c_A Uncharacterized protein 41.7 20 0.0007 29.3 3.4 21 272-292 46-66 (95)
3 3pwf_A Rubrerythrin; non heme 35.0 2.1E+02 0.0071 24.7 9.0 54 118-177 10-64 (170)
4 1o9i_A Pseudocatalase; oxidore 34.1 21 0.00073 33.6 2.7 129 123-292 24-184 (266)
5 2oh3_A Rubrerythrin, COG1633: 30.5 62 0.0021 26.9 4.8 98 152-293 37-142 (167)
6 2hz8_A De novo designed DIIRON 30.2 27 0.00091 29.4 2.4 61 217-292 11-80 (115)
7 2v8t_A Manganese-containing ps 28.1 31 0.001 33.2 2.7 127 123-292 25-191 (302)
8 1zpy_A Hypothetical protein NE 27.9 49 0.0017 26.9 3.5 21 272-292 46-66 (95)
9 2fzf_A Hypothetical protein; s 25.9 57 0.002 27.1 3.8 98 150-292 47-153 (175)
10 1vjx_A Putative ferritin-like 25.7 48 0.0016 27.4 3.2 22 272-293 41-62 (157)
11 1vjx_A Putative ferritin-like 25.3 76 0.0026 26.2 4.4 104 150-292 40-148 (157)
12 2fzf_A Hypothetical protein; s 20.5 99 0.0034 25.7 4.2 21 273-293 49-69 (175)
13 3b5o_A CADD-like protein of un 20.4 5.1E+02 0.017 24.2 9.3 47 205-251 132-179 (244)
No 1
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=57.98 E-value=3.7 Score=34.24 Aligned_cols=121 Identities=20% Similarity=0.110 Sum_probs=73.2
Q ss_pred cchhhhhhhhhhcCchhHHHHHHHHHhhcCCccccchHHHHHHHHHhHHHHHHHHH----HhcCChHHHHHHHHHHHHHH
Q 018864 118 DYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIME----ELGGNAWWFDRFLAQHIAVA 193 (349)
Q Consensus 118 ~~~Rfi~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~wI~tlleEAeNErmHLLi~~----~L~~p~~~~~R~laq~~~~~ 193 (349)
.+++.+-.|..|..=|+..+.+.- ..|+ .+.-+.+.++|.+|+.|...+. .+||.+..- . +
T Consensus 10 ~LN~~l~~El~A~~~Y~~~a~~~~---~~g~---~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~-~-~------- 74 (159)
T 4am5_A 10 YLNRGLRSELTAVSQYWLHYRMLE---DWGY---KDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQ-T-L------- 74 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH---HHTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCS-B-C-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---cCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccc-c-c-------
Confidence 356778889888888877654332 2222 2344567789999999997764 345433100 0 0
Q ss_pred HHHHHHHHHhhchhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCC
Q 018864 194 YYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIE 273 (349)
Q Consensus 194 fy~~~~~~YlvSPr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~a 273 (349)
-..-..=++.-+..-.--.|.++...|..+++.-+. . .|.
T Consensus 75 ----~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~----------------~--------------------~D~ 114 (159)
T 4am5_A 75 ----DPLRIGQTVKEVLESDLAAEREARALYQEGAAYAAS----------------V--------------------GDF 114 (159)
T ss_dssp ----CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------T--------------------TCH
T ss_pred ----cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------C--------------------CCH
Confidence 000011133334444445677888888887765431 1 134
Q ss_pred CHHHHHHHHHhhhhhhHhhh
Q 018864 274 NLYDVFLNIRDDEAEHCKTM 293 (349)
Q Consensus 274 tLrDV~l~IRaDEa~Hr~vn 293 (349)
..+|+|..|-.||.+|.+..
T Consensus 115 ~t~~~l~~il~eEeeH~~~l 134 (159)
T 4am5_A 115 PSKNLFEELMGDEEHHIDFL 134 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999998763
No 2
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=41.73 E-value=20 Score=29.26 Aligned_cols=21 Identities=29% Similarity=0.423 Sum_probs=18.2
Q ss_pred CCCHHHHHHHHHhhhhhhHhh
Q 018864 272 IENLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 272 ~atLrDV~l~IRaDEa~Hr~v 292 (349)
+..++.|+.-||+||-+|..-
T Consensus 46 d~~~k~vl~~i~~EEkeH~g~ 66 (95)
T 3k6c_A 46 DKELKAILAHNRDEEKEHAAM 66 (95)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 447899999999999999764
No 3
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=34.97 E-value=2.1e+02 Score=24.71 Aligned_cols=54 Identities=22% Similarity=0.200 Sum_probs=36.0
Q ss_pred cchhhhhhhhhhcCchhHHHHHHHHHhhcCCccccchHHHHHHHHHhHHHHHHHHHH-hcC
Q 018864 118 DYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEE-LGG 177 (349)
Q Consensus 118 ~~~Rfi~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~wI~tlleEAeNErmHLLi~~~-L~~ 177 (349)
.+.+.+--|+-|+.=|+.++.+..- -|+- ..=+...+.|+||+.|-..+.+ |++
T Consensus 10 nL~~afagEs~A~~~Y~~~A~~A~~---eG~~---~iA~~F~~~A~~E~~HA~~~~~~L~~ 64 (170)
T 3pwf_A 10 FLEEAFAGESMAHMRYLIFAEKAEQ---EGFP---NIAKLFRAIAYAEFVHAKNHFIALGK 64 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---TTCH---HHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---cCHH---HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4677788899999888887765431 1211 1234666899999999976555 544
No 4
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=34.11 E-value=21 Score=33.65 Aligned_cols=129 Identities=16% Similarity=0.043 Sum_probs=74.7
Q ss_pred hhhhhhhcCchhHHHHHHHHHhhcCCccccch-HHHHHHHHHhHHHHHHHH----HHhcC--ChHHHHHH-----HHHHH
Q 018864 123 FVLETIARVPYFAFISVLHMYESFGWWRRADY-LKVHFAESWNEMHHLLIM----EELGG--NAWWFDRF-----LAQHI 190 (349)
Q Consensus 123 i~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~w-I~tlleEAeNErmHLLi~----~~L~~--p~~~~~R~-----laq~~ 190 (349)
+++|-++|.=|=-.++++-|+....+ |+.+- ...+..=+--|..||-++ ..|.+ +.. .+.. ++...
T Consensus 24 ~L~e~~GG~~GElsAamqYl~Q~~~~-~~~~~y~dLL~dIatEEl~HlEmva~~I~~L~~ga~~~-~~~a~~~p~~~~~~ 101 (266)
T 1o9i_A 24 RLQESLGGQWGETTGMMSFLSQGWAS-TGAEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFG-PEDLKRDPSLATTM 101 (266)
T ss_dssp HHHHHHHSTTSHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCS-HHHHHHCTTHHHHH
T ss_pred HHHHHhCCCccHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCcc-hhhcccchhhHhhh
Confidence 67899998888444455666555554 44333 345555668899998554 23332 221 1110 00001
Q ss_pred HH---HHHHH--------------HHHHHhhc---hhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCHHHHhhhcC
Q 018864 191 AV---AYYFV--------------TVFMYVIS---PRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPAVAIKYYTG 250 (349)
Q Consensus 191 ~~---~fy~~--------------~~~~YlvS---Pr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~iAi~Yw~l 250 (349)
.+ -+|.. +...|+.+ +..--+-+=-.|..|..+|.+.++.++
T Consensus 102 ~g~n~~~~~~~g~g~~p~ds~G~pWt~~yv~~~Gdl~aDL~~niaaE~~Ar~~Y~rl~~~td------------------ 163 (266)
T 1o9i_A 102 AGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMTE------------------ 163 (266)
T ss_dssp HHSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTCC------------------
T ss_pred cCCChHHHHhcCCCCCccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------------
Confidence 00 01110 11223332 444445555678889999999877663
Q ss_pred CCCcchhhhhhccCCCCCCCCCCCHHHHHHHHHhhhhhhHhh
Q 018864 251 GDLYLFDEFQTARLPNSRRPKIENLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 251 ~dly~fde~qt~~~p~~rrP~~atLrDV~l~IRaDEa~Hr~v 292 (349)
|...+|+|..|+.||..|.+.
T Consensus 164 ---------------------Dp~vkd~L~fLi~RE~~H~~~ 184 (266)
T 1o9i_A 164 ---------------------DEGVRDMLKFLLARETQHQLQ 184 (266)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------ChhHHHHHHHHHHHHHHHHHH
Confidence 337899999999999999876
No 5
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=30.49 E-value=62 Score=26.87 Aligned_cols=98 Identities=14% Similarity=0.092 Sum_probs=64.9
Q ss_pred cchHHHHHHHHHhHHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHH---HH---HHHHHhhchhhhhhhhhhhhhhHHHH
Q 018864 152 ADYLKVHFAESWNEMHHLLIMEELGGNA--WWFDRFLAQHIAVAYY---FV---TVFMYVISPRMAYHFSECVESHAFET 223 (349)
Q Consensus 152 ~~wI~tlleEAeNErmHLLi~~~L~~p~--~~~~R~laq~~~~~fy---~~---~~~~YlvSPr~ahRfvgylEEEAV~T 223 (349)
.+.-+.+..-|.-|+.|.-++.++.+-. .-..+.- +.+. .. ..+-++.++.-+.++.--.|.+|+..
T Consensus 37 ~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~E~~a~~f 111 (167)
T 2oh3_A 37 LDTATVFRDMARFSTLHGDEIKQRSRALELPKLMSWQ-----YRWKTPPEVGDENDIHYLMTPYHALRYARDNEIRGMEY 111 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGG-----TSCCCCCCSSCC---CGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc-----ccCCCcHhhhhHhhccccCCHHHHHHHHHHHHHHHHHH
Confidence 3444566678999999999988884220 0000000 0000 00 02235567888889999999999999
Q ss_pred HHHHHHHhcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCCCHHHHHHHHHhhhhhhHhhh
Q 018864 224 YDKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIENLYDVFLNIRDDEAEHCKTM 293 (349)
Q Consensus 224 YT~~L~di~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~atLrDV~l~IRaDEa~Hr~vn 293 (349)
|.++.+... +...+++|..|-.||..|.+.-
T Consensus 112 Y~~~a~~~~---------------------------------------d~~~k~~~~~la~eE~~H~~~l 142 (167)
T 2oh3_A 112 YKEAAANSA---------------------------------------DPEVKRLGADFAAEEAEHVVAL 142 (167)
T ss_dssp HHHHHHHCC---------------------------------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCC---------------------------------------CHHHHHHHHHHHHHHHHHHHHH
Confidence 999865542 3478899999999999999883
No 6
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=30.19 E-value=27 Score=29.43 Aligned_cols=61 Identities=26% Similarity=0.322 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHHHHhcc----ccc-----CCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCCCHHHHHHHHHhhhh
Q 018864 217 ESHAFETYDKFIKAQGE----KLK-----KMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIENLYDVFLNIRDDEA 287 (349)
Q Consensus 217 EEEAV~TYT~~L~di~~----~~k-----~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~atLrDV~l~IRaDEa 287 (349)
|..|+..|.+.|+...+ ++. .+.|=--|+.+|.- . +.+ -++..-+++|+-||.||.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~el~~lIr~~ikaE~~AI~~Y~q--------L--A~~-----AP~ee~k~iI~eIr~DE~ 75 (115)
T 2hz8_A 11 EQQAIKIYKEVLKKAKEGDEQELARLIQEIVKAEKQAVKVYKE--------A--AEK-----ARNPEKRQVIDKILEDEE 75 (115)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHTTTHHHHHHHHHHHHHHHHH--------H--HHS-----CCCTTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHHH--------H--Hhc-----CCCHHHHHHHHHHHHHHH
Confidence 55677777777766531 111 12234456666642 0 111 124467799999999999
Q ss_pred hhHhh
Q 018864 288 EHCKT 292 (349)
Q Consensus 288 ~Hr~v 292 (349)
.|-.-
T Consensus 76 rH~~~ 80 (115)
T 2hz8_A 76 KHIEW 80 (115)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99776
No 7
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=28.10 E-value=31 Score=33.20 Aligned_cols=127 Identities=13% Similarity=-0.023 Sum_probs=72.5
Q ss_pred hhhhhhhcCchhHHHHHHHHHhhcCCccccc---hHH-HHHHHHHhHHHHHHHH----HHh--cCChHHHH---------
Q 018864 123 FVLETIARVPYFAFISVLHMYESFGWWRRAD---YLK-VHFAESWNEMHHLLIM----EEL--GGNAWWFD--------- 183 (349)
Q Consensus 123 i~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~---wI~-tlleEAeNErmHLLi~----~~L--~~p~~~~~--------- 183 (349)
+++|-++|.=|=-.++++-++....+ |+.+ -++ .+..=+--|..||-++ ..| +.+....+
T Consensus 25 ~L~eq~GG~~GElsAamqYl~Qs~~~-~~~~~~~~~~dLL~dIatEEL~HlEmvat~I~~L~~Ga~~~~~~~~~~~~~~p 103 (302)
T 2v8t_A 25 AVQALLGGRFGEMSTLMNYMYQSFNF-RGKKALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPASTP 103 (302)
T ss_dssp HHTHHHHSTTSHHHHHHHHHHHHHHC-SCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCCCCCCCCGGGCT
T ss_pred HHHHHhCCCccHHHHHHHHHHHHccC-CCCcchHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCChhhhhcccccccch
Confidence 67899998888444455666555554 4442 344 4445558899998553 222 21110000
Q ss_pred --HHH----HHHH------------HHHHHHHHHHHHhh---chhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCH
Q 018864 184 --RFL----AQHI------------AVAYYFVTVFMYVI---SPRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPA 242 (349)
Q Consensus 184 --R~l----aq~~------------~~~fy~~~~~~Ylv---SPr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~ 242 (349)
+.+ .++. ++.+ +...|+. .+..--+-+=-.|..|..+|.+.++.++
T Consensus 104 ~~~a~~~~~~~~~i~~g~g~~p~ds~G~p---Wta~Yv~~~Gdl~aDL~~NiaAE~~Ar~~Y~rL~~~td---------- 170 (302)
T 2v8t_A 104 LGFAKDVRNAAHFIAGGANSLVMGAMGEH---WNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMTD---------- 170 (302)
T ss_dssp TGGGGGSSCSHHHHTSSSCCCSBCTTSCB---CBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTCC----------
T ss_pred HHHhhhcCCcHHHhhcCCCCCccCCCCCC---CCcchhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC----------
Confidence 000 0000 0001 0122332 2334444555678899999999877663
Q ss_pred HHHhhhcCCCCcchhhhhhccCCCCCCCCCCCHHHHHHHHHhhhhhhHhh
Q 018864 243 VAIKYYTGGDLYLFDEFQTARLPNSRRPKIENLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 243 iAi~Yw~l~dly~fde~qt~~~p~~rrP~~atLrDV~l~IRaDEa~Hr~v 292 (349)
|...+|+|..|+.||..|...
T Consensus 171 -----------------------------Dp~vkd~L~fLi~RE~~H~~~ 191 (302)
T 2v8t_A 171 -----------------------------NPVAREMIGYLLVRGGVHAAA 191 (302)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------ChhHHHHHHHHHHHHHHHHHH
Confidence 337899999999999999887
No 8
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=27.89 E-value=49 Score=26.94 Aligned_cols=21 Identities=29% Similarity=0.423 Sum_probs=18.6
Q ss_pred CCCHHHHHHHHHhhhhhhHhh
Q 018864 272 IENLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 272 ~atLrDV~l~IRaDEa~Hr~v 292 (349)
+.-++.|+.-||++|.+|..-
T Consensus 46 D~evk~vl~~iadEEkeH~g~ 66 (95)
T 1zpy_A 46 DKELKAILAHNRDEEKEHAAM 66 (95)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 557999999999999999865
No 9
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=25.86 E-value=57 Score=27.15 Aligned_cols=98 Identities=15% Similarity=-0.050 Sum_probs=58.1
Q ss_pred cccchHHHHHHHHHhHHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHHHHH-----HHHhhchhhhhhhhhhhhhhH
Q 018864 150 RRADYLKVHFAESWNEMHHLLIMEELGG----NAWWFDRFLAQHIAVAYYFVTV-----FMYVISPRMAYHFSECVESHA 220 (349)
Q Consensus 150 Rd~~wI~tlleEAeNErmHLLi~~~L~~----p~~~~~R~laq~~~~~fy~~~~-----~~YlvSPr~ahRfvgylEEEA 220 (349)
++...-+.+.+-|..|+.|.-.+.++-+ ......+ ... +| .-+. +-+..++..+.+..--.|.+|
T Consensus 47 ~~~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g~~~~~~~--~~~---~~-~~~~~~~~~~~~~~~~~~~L~~ai~~E~~a 120 (175)
T 2fzf_A 47 KIEALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFP--KEH---IG-PELQPVARELEKVQDIIDLIRWAMKAEEIA 120 (175)
T ss_dssp CCTTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCC--SCC---BS-CCCCCCCSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcch--hhh---hh-hhhhhhHHhccccCCHHHHHHHHHHHHHHH
Confidence 3444445666789999999988766621 1000000 000 00 0000 011223455666777778888
Q ss_pred HHHHHHHHHHhcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCCCHHHHHHHHHhhhhhhHhh
Q 018864 221 FETYDKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIENLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 221 V~TYT~~L~di~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~atLrDV~l~IRaDEa~Hr~v 292 (349)
+..|.++++... +...+++|..|-.||..|.+.
T Consensus 121 ~~~Y~~~a~~~~---------------------------------------d~~~r~l~~~ia~eE~~H~~~ 153 (175)
T 2fzf_A 121 AEFYLKLEEMVK---------------------------------------EEEKKRLMRYLADMERGHYYT 153 (175)
T ss_dssp HHHHHHHHHTSC---------------------------------------SHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCC---------------------------------------CHHHHHHHHHHHHHHHHHHHH
Confidence 888887766542 236789999999999999876
No 10
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=25.71 E-value=48 Score=27.40 Aligned_cols=22 Identities=23% Similarity=0.413 Sum_probs=19.5
Q ss_pred CCCHHHHHHHHHhhhhhhHhhh
Q 018864 272 IENLYDVFLNIRDDEAEHCKTM 293 (349)
Q Consensus 272 ~atLrDV~l~IRaDEa~Hr~vn 293 (349)
+..++++|..|..+|..|++.-
T Consensus 41 ~~~~k~lF~~LA~eE~~H~~~l 62 (157)
T 1vjx_A 41 NGEIKKTFLELADQERIHAEIF 62 (157)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 4478999999999999999983
No 11
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=25.30 E-value=76 Score=26.18 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=62.6
Q ss_pred cccchHHHHHHHHHhHHHHHHHHHHhcCChHHHHHHH--HHHHH-HHHH-HHH-HHHHhhchhhhhhhhhhhhhhHHHHH
Q 018864 150 RRADYLKVHFAESWNEMHHLLIMEELGGNAWWFDRFL--AQHIA-VAYY-FVT-VFMYVISPRMAYHFSECVESHAFETY 224 (349)
Q Consensus 150 Rd~~wI~tlleEAeNErmHLLi~~~L~~p~~~~~R~l--aq~~~-~~fy-~~~-~~~YlvSPr~ahRfvgylEEEAV~TY 224 (349)
.+.+.-+.+..=|.-|..|.-++.++.+...|-.... ..... .+|. |.- -..+..+...+.++.--.|.+|+..|
T Consensus 40 ~~~~~k~lF~~LA~eE~~H~~~l~~l~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y 119 (157)
T 1vjx_A 40 FNGEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIILY 119 (157)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTCBCCSBCCCCCCCCCTTGGGCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhHHHHHHhhhhhhccchhhhhhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 3334444555678999999999998853111111000 00000 0000 000 00023346678888888899999999
Q ss_pred HHHHHHhcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCCCHHHHHHHHHhhhhhhHhh
Q 018864 225 DKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIENLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 225 T~~L~di~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~atLrDV~l~IRaDEa~Hr~v 292 (349)
.++.+... +...+.+|..|-.||..|...
T Consensus 120 ~~~a~~~~---------------------------------------d~~~k~l~~~la~eE~~H~~~ 148 (157)
T 1vjx_A 120 YELKDGLV---------------------------------------NSDAQKTVKKIIDQEKEHLRK 148 (157)
T ss_dssp HHHHHHCC---------------------------------------SHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCC---------------------------------------CHHHHHHHHHHHHHHHHHHHH
Confidence 88877653 346889999999999999875
No 12
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=20.53 E-value=99 Score=25.66 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHhhhhhhHhhh
Q 018864 273 ENLYDVFLNIRDDEAEHCKTM 293 (349)
Q Consensus 273 atLrDV~l~IRaDEa~Hr~vn 293 (349)
..++++|..+..||..|.+.-
T Consensus 49 ~~~~~~f~~lA~~E~~H~~~l 69 (175)
T 2fzf_A 49 EALKEKINWLAEEEKKHEALL 69 (175)
T ss_dssp TTHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 378999999999999999983
No 13
>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*
Probab=20.40 E-value=5.1e+02 Score=24.18 Aligned_cols=47 Identities=13% Similarity=0.118 Sum_probs=31.5
Q ss_pred chhhhhhhhhhhhhhHHHHHH-HHHHHhcccccCCCCCHHHHhhhcCC
Q 018864 205 SPRMAYHFSECVESHAFETYD-KFIKAQGEKLKKMPAPAVAIKYYTGG 251 (349)
Q Consensus 205 SPr~ahRfvgylEEEAV~TYT-~~L~di~~~~k~~pAP~iAi~Yw~l~ 251 (349)
||....-+-+..--|+...+- .+++++-..++....|+-+..||.++
T Consensus 132 s~d~~~aLGA~yatE~iaipe~~ly~~li~gL~~~~~~~~~l~FF~~H 179 (244)
T 3b5o_A 132 DRQVDYVLGATYAIEATSIPELTLIVKLVEWLHEGAIPKDLQYFFSKH 179 (244)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhCCCchhHHHHHHHH
Confidence 777777777766777775552 24555433345568899999999863
Done!