Query 018864
Match_columns 349
No_of_seqs 157 out of 366
Neff 3.7
Searched_HMMs 13730
Date Mon Mar 25 07:14:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018864.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018864hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nnqa1 a.25.1.1 (A:2-134) Rub 75.3 5.7 0.00041 30.8 8.1 110 117-292 9-119 (133)
2 d1yuza1 a.25.1.1 (A:23-157) Ni 73.9 2.8 0.0002 31.9 5.7 51 118-174 10-60 (135)
3 d1jkva_ a.25.1.3 (A:) Manganes 68.4 6.4 0.00047 35.0 7.6 130 123-292 24-184 (266)
4 d1lkoa1 a.25.1.1 (A:2-147) Rub 66.8 10 0.00072 29.0 7.6 119 118-292 11-133 (146)
5 d2fzfa1 a.25.1.1 (A:10-167) Hy 62.8 3.2 0.00023 31.2 3.8 21 272-292 124-144 (158)
6 d2ib0a1 a.25.1.9 (A:17-158) Hy 53.2 6.3 0.00046 30.3 4.1 49 205-292 79-127 (142)
7 d2oh3a1 a.25.1.8 (A:3-154) Unc 53.1 5.7 0.00042 29.7 3.8 108 156-306 38-150 (152)
8 d1vjxa_ a.25.1.1 (A:) Hypothet 43.7 13 0.00093 27.7 4.5 50 204-292 91-140 (149)
9 d1zpya1 a.25.1.5 (A:4-94) Hypo 35.6 14 0.001 28.2 3.4 21 272-292 43-63 (91)
10 d2cwla1 a.25.1.3 (A:1-299) Man 32.8 23 0.0017 31.7 5.0 137 123-299 25-199 (299)
11 d1j30a_ a.25.1.1 (A:) Hypothet 32.7 86 0.0063 23.0 8.7 51 118-174 10-60 (141)
12 d2oh3a1 a.25.1.8 (A:3-154) Unc 32.7 69 0.005 23.2 7.2 21 274-294 35-55 (152)
13 d2ib0a1 a.25.1.9 (A:17-158) Hy 29.3 28 0.002 26.3 4.4 19 274-292 34-52 (142)
14 d1nf4a_ a.25.1.1 (A:) Bacterio 26.2 12 0.00087 29.3 1.6 120 118-292 12-135 (169)
No 1
>d1nnqa1 a.25.1.1 (A:2-134) Rubrerythrin, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=75.34 E-value=5.7 Score=30.83 Aligned_cols=110 Identities=17% Similarity=0.056 Sum_probs=69.7
Q ss_pred ccchhhhhhhhhhcCchhHHHHHHHHHhhcCCccccchHHHHHHHHHhHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHH
Q 018864 117 RDYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEELGG-NAWWFDRFLAQHIAVAYY 195 (349)
Q Consensus 117 R~~~Rfi~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~wI~tlleEAeNErmHLLi~~~L~~-p~~~~~R~laq~~~~~fy 195 (349)
+++.+++--|+-|..=|+.++.+.= .-|. ...-+.+.++|.+|+.|...+.++-+ -+.-- ..+...+.+
T Consensus 9 ~~L~~A~~gE~~A~~~Y~~~A~~a~---~~G~---~~lA~~f~~~A~eE~~HA~~~~~~i~~l~~~~-~~L~~~~~~--- 78 (133)
T d1nnqa1 9 KFLEEAFAGESMAHMRYLIFAEKAE---QEGF---PNIAKLFRAIAYAEFVHAKNHFIALGKLGKTP-ENLQMGIEG--- 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---HTTC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHH-HHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HCCc---HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH-hhhHHHHHH---
Confidence 4688899999999999988765332 1122 23445777999999999976654421 11100 111111111
Q ss_pred HHHHHHHhhchhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCCCH
Q 018864 196 FVTVFMYVISPRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIENL 275 (349)
Q Consensus 196 ~~~~~~YlvSPr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~atL 275 (349)
-+.+++..|..+++.-.. . .+...
T Consensus 79 --------------------e~~e~~~~Y~e~~~~a~~----------------e--------------------gd~~~ 102 (133)
T d1nnqa1 79 --------------------ETFEVEEMYPVYNKAAEF----------------Q--------------------GEKEA 102 (133)
T ss_dssp --------------------HHHHHHTHHHHHHHHHHH----------------T--------------------TCHHH
T ss_pred --------------------hHHHHHHHHHHHHHHHHH----------------C--------------------CCHHH
Confidence 123677788888776531 2 14468
Q ss_pred HHHHHHHHhhhhhhHhh
Q 018864 276 YDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 276 rDV~l~IRaDEa~Hr~v 292 (349)
+++|..|.+||..|.+-
T Consensus 103 a~~f~~i~~~E~~Ha~~ 119 (133)
T d1nnqa1 103 VRTTHYALEAEKIHAEL 119 (133)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999999775
No 2
>d1yuza1 a.25.1.1 (A:23-157) Nigerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=73.88 E-value=2.8 Score=31.92 Aligned_cols=51 Identities=20% Similarity=0.129 Sum_probs=34.7
Q ss_pred cchhhhhhhhhhcCchhHHHHHHHHHhhcCCccccchHHHHHHHHHhHHHHHHHHHH
Q 018864 118 DYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEE 174 (349)
Q Consensus 118 ~~~Rfi~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~wI~tlleEAeNErmHLLi~~~ 174 (349)
.+++.+-.|.-|..=|+.++.+.-- .| -.+.-+.+.++|..|+.|...+.+
T Consensus 10 ~L~~a~~~E~~A~~~Yl~~A~~~~~---~g---~~~ia~~f~~~A~eE~~HA~~l~~ 60 (135)
T d1yuza1 10 NLKAAIAGETGAHAKYTAFAKAARE---QG---YEQIARLFEATAAAELIHIGLEYA 60 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH---TT---CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhH---CC---ChHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577788888888878777654431 11 123456788999999999976533
No 3
>d1jkva_ a.25.1.3 (A:) Manganese catalase (T-catalase) {Lactobacillus plantarum [TaxId: 1590]}
Probab=68.36 E-value=6.4 Score=35.00 Aligned_cols=130 Identities=17% Similarity=0.066 Sum_probs=82.8
Q ss_pred hhhhhhhcCchhHHHHHHHHHhhcCCccccchH-HHHHHHHHhHHHHHHHHH-----HhcCChH-----HHHHHHHHHHH
Q 018864 123 FVLETIARVPYFAFISVLHMYESFGWWRRADYL-KVHFAESWNEMHHLLIME-----ELGGNAW-----WFDRFLAQHIA 191 (349)
Q Consensus 123 i~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~wI-~tlleEAeNErmHLLi~~-----~L~~p~~-----~~~R~laq~~~ 191 (349)
.++|-++|.=|=-.++++-++..+. .|+.+.+ ..+++=+--|..||-++- -+++.+. -.+..+...++
T Consensus 24 ~L~e~~GG~~GElsa~~qYl~Q~~~-~~~~~~~~dll~dIatEEl~HlEmvat~I~~Ll~~~~~~~~~~~~~~~~~~~~~ 102 (266)
T d1jkva_ 24 RLQESLGGQWGETTGMMSYLSQGWA-STGAEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKRDPSLATTMA 102 (266)
T ss_dssp HHHHHHHSTTSHHHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHHCTTHHHHHH
T ss_pred HHHHHhCCCchHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhhcccchhHHHHhc
Confidence 6789999999855555567766555 3665545 577888999999996542 2222110 00001112222
Q ss_pred HH---HHHH--------------HHHHHhhc---hhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCHHHHhhhcCC
Q 018864 192 VA---YYFV--------------TVFMYVIS---PRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPAVAIKYYTGG 251 (349)
Q Consensus 192 ~~---fy~~--------------~~~~YlvS---Pr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~iAi~Yw~l~ 251 (349)
+. |+.. +...|+.+ +...-|..=..|..|..+|.+.++.++
T Consensus 103 G~~p~~~~~~g~g~~~~ds~G~pWt~~Yv~~~Gnl~~DL~~NiaAE~~Ar~~Y~rl~~~td------------------- 163 (266)
T d1jkva_ 103 GMDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMTE------------------- 163 (266)
T ss_dssp HSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTCC-------------------
T ss_pred CCCcceeeeccCcccccCCCCCCCCccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------------
Confidence 21 1111 23344444 566677777889999999999876653
Q ss_pred CCcchhhhhhccCCCCCCCCCCCHHHHHHHHHhhhhhhHhh
Q 018864 252 DLYLFDEFQTARLPNSRRPKIENLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 252 dly~fde~qt~~~p~~rrP~~atLrDV~l~IRaDEa~Hr~v 292 (349)
|...+|+|..|++||..|...
T Consensus 164 --------------------Dp~vk~~L~fL~~rE~~H~~~ 184 (266)
T d1jkva_ 164 --------------------DEGVRDMLKFLLARETQHQLQ 184 (266)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------ChhHHHHHHHHHHHHHHHHHH
Confidence 447899999999999999874
No 4
>d1lkoa1 a.25.1.1 (A:2-147) Rubrerythrin, N-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}
Probab=66.79 E-value=10 Score=28.96 Aligned_cols=119 Identities=18% Similarity=0.084 Sum_probs=70.5
Q ss_pred cchhhhhhhhhhcCchhHHHHHHHHHhhcCCccccchHHHHHHHHHhHHHHHHHHHHh----cCChHHHHHHHHHHHHHH
Q 018864 118 DYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEEL----GGNAWWFDRFLAQHIAVA 193 (349)
Q Consensus 118 ~~~Rfi~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~wI~tlleEAeNErmHLLi~~~L----~~p~~~~~R~laq~~~~~ 193 (349)
.+.+++--|.-|..=|+.++.+..-. |+ .+.-+.+.++|..|+.|...+.++ ++..... ...
T Consensus 11 ~L~~a~~~E~~A~~~Y~~~A~~a~~~---g~---~~ia~~f~~~A~eE~~HA~~l~~~l~~lg~~p~~~--~~~------ 76 (146)
T d1lkoa1 11 NILTAFAGESQARNRYNYFGGQAKKD---GF---VQISDIFAETADQEREHAKRLFKFLEGGDLEIVAA--FPA------ 76 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT---TC---HHHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCCCC--CCC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC---Cc---HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCcCCC--CCc------
Confidence 45677777888888888776654321 11 233457779999999999887766 2211000 000
Q ss_pred HHHHHHHHHhhchhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCC
Q 018864 194 YYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIE 273 (349)
Q Consensus 194 fy~~~~~~YlvSPr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~a 273 (349)
...--++...-...--.|.+|+..|.++++.... . .|.
T Consensus 77 ------~~~~~~~~~l~~~~~~~e~e~~~~y~~~~~~a~~----------------~--------------------~D~ 114 (146)
T d1lkoa1 77 ------GIIADTHANLIASAAGEHHEYTEMYPSFARIARE----------------E--------------------GYE 114 (146)
T ss_dssp ------CCCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH----------------H--------------------TCH
T ss_pred ------cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------C--------------------CCH
Confidence 0000000011111122356788999988877531 0 134
Q ss_pred CHHHHHHHHHhhhhhhHhh
Q 018864 274 NLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 274 tLrDV~l~IRaDEa~Hr~v 292 (349)
..+++|..|-.||..|.+.
T Consensus 115 ~~~~~f~~i~~~E~~H~~~ 133 (146)
T d1lkoa1 115 EIARVFASIAVAEEFHEKR 133 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999876
No 5
>d2fzfa1 a.25.1.1 (A:10-167) Hypothetical protein PF1190 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=62.80 E-value=3.2 Score=31.24 Aligned_cols=21 Identities=24% Similarity=0.147 Sum_probs=18.7
Q ss_pred CCCHHHHHHHHHhhhhhhHhh
Q 018864 272 IENLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 272 ~atLrDV~l~IRaDEa~Hr~v 292 (349)
+..+++++..|.+||..|...
T Consensus 124 d~~~~~l~~~i~~~E~~H~~~ 144 (158)
T d2fzfa1 124 EEEKKRLMRYLADMERGHYYT 144 (158)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 457899999999999999876
No 6
>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=53.20 E-value=6.3 Score=30.26 Aligned_cols=49 Identities=8% Similarity=-0.008 Sum_probs=42.2
Q ss_pred chhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCCCHHHHHHHHHh
Q 018864 205 SPRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIENLYDVFLNIRD 284 (349)
Q Consensus 205 SPr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~atLrDV~l~IRa 284 (349)
++..+-.+.-.+|+.++.+|.+.++... +..+|++...|=.
T Consensus 79 d~~~~l~~a~~~E~~a~~~Y~~~~~~~~---------------------------------------d~~~r~la~~il~ 119 (142)
T d2ib0a1 79 SAADAARLAVRMENDGATAWRAVVEHAE---------------------------------------TADDRVFASTALT 119 (142)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHCC---------------------------------------SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------------------------------CHHHHHHHHHHHH
Confidence 5778889999999999999999887763 3368899999999
Q ss_pred hhhhhHhh
Q 018864 285 DEAEHCKT 292 (349)
Q Consensus 285 DEa~Hr~v 292 (349)
||+.|.-.
T Consensus 120 ~ea~ha~~ 127 (142)
T d2ib0a1 120 ESAVMATR 127 (142)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999876
No 7
>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}
Probab=53.10 E-value=5.7 Score=29.72 Aligned_cols=108 Identities=12% Similarity=0.029 Sum_probs=64.1
Q ss_pred HHHHHHHHhHHHHHHHHHHhc----CChHHHHHHHHHHHHHH-HHHHHHHHHhhchhhhhhhhhhhhhhHHHHHHHHHHH
Q 018864 156 KVHFAESWNEMHHLLIMEELG----GNAWWFDRFLAQHIAVA-YYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKA 230 (349)
Q Consensus 156 ~tlleEAeNErmHLLi~~~L~----~p~~~~~R~laq~~~~~-fy~~~~~~YlvSPr~ahRfvgylEEEAV~TYT~~L~d 230 (349)
+.+..-|..|+.|...+.++. ++.......... ... .-....+....++.-+.+..--.|+.|+..|..+.+.
T Consensus 38 ~~f~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~Al~~E~~a~~~Y~~~a~~ 115 (152)
T d2oh3a1 38 TVFRDMARFSTLHGDEIKQRSRALELPKLMSWQYRWK--TPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAAN 115 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCCCCCGGGTSCC--CCCCSSCC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhccc--cchhHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678999999998886653 222110000000 000 0000011333455566666667788888888887665
Q ss_pred hcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCCCHHHHHHHHHhhhhhhHhhhhhcccccCCCCCC
Q 018864 231 QGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIENLYDVFLNIRDDEAEHCKTMKACQTHGNLRSPH 306 (349)
Q Consensus 231 i~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~atLrDV~l~IRaDEa~Hr~vn~anht~anL~s~~ 306 (349)
.+ +..+++++..|.+||..|.... ...+..+..|.
T Consensus 116 ~~---------------------------------------d~~~r~~~~~l~~~E~~H~~~l--~~~l~~~~~p~ 150 (152)
T d2oh3a1 116 SA---------------------------------------DPEVKRLGADFAAEEAEHVVAL--DKWIEKTPRPS 150 (152)
T ss_dssp CC---------------------------------------CHHHHHHHHHHHHHHHHHHHHH--HHHHHHSCCCC
T ss_pred cC---------------------------------------CHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCCC
Confidence 42 3478999999999999999985 45566665554
No 8
>d1vjxa_ a.25.1.1 (A:) Hypothetical protein TM1526 {Thermotoga maritima [TaxId: 2336]}
Probab=43.65 E-value=13 Score=27.69 Aligned_cols=50 Identities=16% Similarity=0.187 Sum_probs=38.0
Q ss_pred hchhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCCCHHHHHHHHH
Q 018864 204 ISPRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIENLYDVFLNIR 283 (349)
Q Consensus 204 vSPr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~atLrDV~l~IR 283 (349)
.+++.+.+..--.|..|+..|..+..... +...+++|..|.
T Consensus 91 ~~~~~~l~~ai~~E~~a~~~Y~~l~~~~~---------------------------------------d~~~r~~~~~i~ 131 (149)
T d1vjxa_ 91 LTLKEVLDIAISVEKDSIILYYELKDGLV---------------------------------------NSDAQKTVKKII 131 (149)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHCC---------------------------------------SHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCC---------------------------------------CHHHHHHHHHHH
Confidence 34566667667778888888887665542 336899999999
Q ss_pred hhhhhhHhh
Q 018864 284 DDEAEHCKT 292 (349)
Q Consensus 284 aDEa~Hr~v 292 (349)
+||..|...
T Consensus 132 ~eE~~H~~~ 140 (149)
T d1vjxa_ 132 DQEKEHLRK 140 (149)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999765
No 9
>d1zpya1 a.25.1.5 (A:4-94) Hypothetical protein NE0167 {Nitrosomonas europaea [TaxId: 915]}
Probab=35.63 E-value=14 Score=28.17 Aligned_cols=21 Identities=29% Similarity=0.423 Sum_probs=18.3
Q ss_pred CCCHHHHHHHHHhhhhhhHhh
Q 018864 272 IENLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 272 ~atLrDV~l~IRaDEa~Hr~v 292 (349)
+..++.|+.-||++|-+|...
T Consensus 43 d~~~k~Vl~hia~EEkeH~g~ 63 (91)
T d1zpya1 43 DKELKAILAHNRDEEKEHAAM 63 (91)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 457999999999999999764
No 10
>d2cwla1 a.25.1.3 (A:1-299) Manganese catalase (T-catalase) {Thermus thermophilus [TaxId: 274]}
Probab=32.80 E-value=23 Score=31.72 Aligned_cols=137 Identities=16% Similarity=0.005 Sum_probs=84.0
Q ss_pred hhhhhhhcCchhHHHHHHHHHhhcCCccccc----hHHHHHHHHHhHHHHHHHH---H--HhcCCh-----------HHH
Q 018864 123 FVLETIARVPYFAFISVLHMYESFGWWRRAD----YLKVHFAESWNEMHHLLIM---E--ELGGNA-----------WWF 182 (349)
Q Consensus 123 i~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~----wI~tlleEAeNErmHLLi~---~--~L~~p~-----------~~~ 182 (349)
.++|-++|.=|=-.++++-++....+ |+.+ +-..+++=+--|..||-++ . -|++.+ .+-
T Consensus 25 ~l~e~~GG~~GEmsa~mqYl~Q~~~~-~~~~~~~~~~dll~dIatEEl~HlEmvat~I~~Ll~~~p~~~~~~~~dp~~~~ 103 (299)
T d2cwla1 25 AVQALLGGRFGEMSTLMNYMYQSFNF-RGKKALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPESAP 103 (299)
T ss_dssp HHGGGTTSTTSHHHHHHHHHHHHHHC-SCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCSCCCCCCGGGCT
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhcC-CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHhhccCchhhH
Confidence 58899999999555555777665553 4332 5567888899999999554 2 232211 000
Q ss_pred HHHH-----HHH----HHHHHH-----HHHHHHHhhc---hhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCHHHH
Q 018864 183 DRFL-----AQH----IAVAYY-----FVTVFMYVIS---PRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPAVAI 245 (349)
Q Consensus 183 ~R~l-----aq~----~~~~fy-----~~~~~~YlvS---Pr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~iAi 245 (349)
.+.. .++ .++.++ .-+...|+.+ +...-+..=..|..|..+|.+.++-++
T Consensus 104 ~~~~~~~~n~~h~i~~g~g~~~~ds~G~pWt~~Yv~~sGnl~aDL~~Ni~aE~~Ar~~y~rl~~~td------------- 170 (299)
T d2cwla1 104 LGFAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMTD------------- 170 (299)
T ss_dssp TGGGGSSSCSHHHHTSSSSCCSBCTTSCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTCC-------------
T ss_pred HHhhhccCChhhhhccCCCCCccCCCCCcCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC-------------
Confidence 0000 111 000000 0123455554 566677778889999999999766553
Q ss_pred hhhcCCCCcchhhhhhccCCCCCCCCCCCHHHHHHHHHhhhhhhHhh-hhhcccc
Q 018864 246 KYYTGGDLYLFDEFQTARLPNSRRPKIENLYDVFLNIRDDEAEHCKT-MKACQTH 299 (349)
Q Consensus 246 ~Yw~l~dly~fde~qt~~~p~~rrP~~atLrDV~l~IRaDEa~Hr~v-n~anht~ 299 (349)
|..++|+|..+++||..|-.. .+|-.++
T Consensus 171 --------------------------Dp~vkd~L~fLi~RE~~H~~~f~~ALe~l 199 (299)
T d2cwla1 171 --------------------------NPVAREMIGYLLVRGGVHAAAYGKALESL 199 (299)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------CccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 458999999999999999876 3333444
No 11
>d1j30a_ a.25.1.1 (A:) Hypothetical rubrerythrin {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=32.73 E-value=86 Score=22.96 Aligned_cols=51 Identities=16% Similarity=0.157 Sum_probs=33.0
Q ss_pred cchhhhhhhhhhcCchhHHHHHHHHHhhcCCccccchHHHHHHHHHhHHHHHHHHHH
Q 018864 118 DYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIMEE 174 (349)
Q Consensus 118 ~~~Rfi~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~wI~tlleEAeNErmHLLi~~~ 174 (349)
.+.+.+--|+-|..=|+.++.+.--. |. .+.-+.+.++|.+|+.|...+.+
T Consensus 10 ~L~~a~~~E~~A~~~Y~~~a~~a~~~---g~---~~iA~~f~~~A~eE~~HA~~~~~ 60 (141)
T d1j30a_ 10 NLKQGFIGESMANRRYLYFAKRADEE---GY---PEIAGLLRSIAEGETAHAFGHLD 60 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---TC---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC---Cc---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566667888887777776543321 21 23345677999999999976543
No 12
>d2oh3a1 a.25.1.8 (A:3-154) Uncharacterized protein AMB4284 homologue {Magnetospirillum magnetotacticum ms-1 [TaxId: 272627]}
Probab=32.69 E-value=69 Score=23.24 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=18.6
Q ss_pred CHHHHHHHHHhhhhhhHhhhh
Q 018864 274 NLYDVFLNIRDDEAEHCKTMK 294 (349)
Q Consensus 274 tLrDV~l~IRaDEa~Hr~vn~ 294 (349)
.++++|..+..+|..|.+.-.
T Consensus 35 ~~~~~f~~la~eE~~H~~~l~ 55 (152)
T d2oh3a1 35 DTATVFRDMARFSTLHGDEIK 55 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999863
No 13
>d2ib0a1 a.25.1.9 (A:17-158) Hypothetical protein Rv2844 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=29.27 E-value=28 Score=26.31 Aligned_cols=19 Identities=0% Similarity=-0.055 Sum_probs=17.9
Q ss_pred CHHHHHHHHHhhhhhhHhh
Q 018864 274 NLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 274 tLrDV~l~IRaDEa~Hr~v 292 (349)
.+++.|..++.||..|++.
T Consensus 34 ~~~~~~~~~~~~e~~H~~~ 52 (142)
T d2ib0a1 34 GVNFLVADALKQHRHRRDD 52 (142)
T ss_dssp GGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999988
No 14
>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=26.24 E-value=12 Score=29.27 Aligned_cols=120 Identities=18% Similarity=0.169 Sum_probs=67.9
Q ss_pred cchhhhhhhhhhcCchhHHHHHHHHHhhcCCccccchHHHHHHHHHhHHHHHHHH----HHhcCChHHHHHHHHHHHHHH
Q 018864 118 DYARFFVLETIARVPYFAFISVLHMYESFGWWRRADYLKVHFAESWNEMHHLLIM----EELGGNAWWFDRFLAQHIAVA 193 (349)
Q Consensus 118 ~~~Rfi~LETVA~VPgmv~~~~~HL~~~~g~~Rd~~wI~tlleEAeNErmHLLi~----~~L~~p~~~~~R~laq~~~~~ 193 (349)
.+++++-.|..|..=|+..... + ...++ .+.-+.+.++|..|+.|..-+ ..+||....- - +
T Consensus 12 ~Ln~~l~~E~~a~~~Y~~~a~~--~-~~~~~---~~l~~~f~~~a~eE~~Ha~~l~eri~~lGg~p~~~-~-~------- 76 (169)
T d1nf4a_ 12 VLNKARAMELHAIHQYMNQHYS--L-DDMDY---GELAANMKLIAIDEMRHAENFAERIKELGGEPTTQ-K-E------- 76 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--H-HHHTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC-C-S-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--H-hccCc---HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCccc-c-c-------
Confidence 3566677777776666554321 1 11111 233445556799999998664 4445443100 0 0
Q ss_pred HHHHHHHHHhhchhhhhhhhhhhhhhHHHHHHHHHHHhcccccCCCCCHHHHhhhcCCCCcchhhhhhccCCCCCCCCCC
Q 018864 194 YYFVTVFMYVISPRMAYHFSECVESHAFETYDKFIKAQGEKLKKMPAPAVAIKYYTGGDLYLFDEFQTARLPNSRRPKIE 273 (349)
Q Consensus 194 fy~~~~~~YlvSPr~ahRfvgylEEEAV~TYT~~L~di~~~~k~~pAP~iAi~Yw~l~dly~fde~qt~~~p~~rrP~~a 273 (349)
-..-+.-+++-+.+..=-.|++++..|.++++.-++ .+ |.
T Consensus 77 ----~~~~~~~~~~e~l~~~l~~E~~~~~~y~~~~~~A~~----------------~~--------------------D~ 116 (169)
T d1nf4a_ 77 ----GKVVTGQAVPVIYESDADQEDATIEAYSQFLKVCKE----------------QG--------------------DI 116 (169)
T ss_dssp ----SCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------TT--------------------CH
T ss_pred ----ccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------cC--------------------CH
Confidence 001112234444444445677888888887766531 01 33
Q ss_pred CHHHHHHHHHhhhhhhHhh
Q 018864 274 NLYDVFLNIRDDEAEHCKT 292 (349)
Q Consensus 274 tLrDV~l~IRaDEa~Hr~v 292 (349)
..+|++..|=.||.+|.+-
T Consensus 117 ~t~~~l~~il~eE~~H~~~ 135 (169)
T d1nf4a_ 117 VTARLFERIIEEEQAHLTY 135 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999854
Done!