BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018871
(349 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/308 (63%), Positives = 232/308 (75%), Gaps = 1/308 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLPGPF TL +LK SFRNVGLN DLVALSG HTFG+ QC+F
Sbjct: 122 LGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 325 CRRVNGNS 332
CR VN NS
Sbjct: 302 CRVVNSNS 309
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 400 bits (1028), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/308 (63%), Positives = 231/308 (75%), Gaps = 1/308 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG HTFG+ QC+F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 325 CRRVNGNS 332
CR VN NS
Sbjct: 301 CRVVNSNS 308
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/308 (63%), Positives = 231/308 (75%), Gaps = 1/308 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG HTFG+ QC+F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 325 CRRVNGNS 332
CR VN NS
Sbjct: 301 CRVVNSNS 308
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/308 (63%), Positives = 231/308 (75%), Gaps = 1/308 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG HTFG+ QC+F
Sbjct: 122 LGRRDSLQAFLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 325 CRRVNGNS 332
CR VN NS
Sbjct: 302 CRVVNSNS 309
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/307 (63%), Positives = 230/307 (74%), Gaps = 1/307 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG HTFG+ QC+F
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 325 CRRVNGN 331
CR VN N
Sbjct: 302 CRVVNSN 308
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/308 (63%), Positives = 231/308 (75%), Gaps = 1/308 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG H+FG+ QC+F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRFI 180
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 325 CRRVNGNS 332
CR VN NS
Sbjct: 301 CRVVNSNS 308
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/308 (63%), Positives = 230/308 (74%), Gaps = 1/308 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG HTFG+ QC+F
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L + D+ TP +FDNKY+ NL +
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNLEEQ 241
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 325 CRRVNGNS 332
CR VN NS
Sbjct: 302 CRVVNSNS 309
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/308 (63%), Positives = 230/308 (74%), Gaps = 1/308 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHF DCFV+GCDASILLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTS 61
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG HTFG+ QC+F
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 181
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 325 CRRVNGNS 332
CR VN NS
Sbjct: 302 CRVVNSNS 309
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/305 (63%), Positives = 229/305 (75%), Gaps = 1/305 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG HTFG+ QC+F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 325 CRRVN 329
CR VN
Sbjct: 301 CRVVN 305
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 396 bits (1018), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/308 (63%), Positives = 230/308 (74%), Gaps = 1/308 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 61
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 62 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 121
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG HTFG+ QC+
Sbjct: 122 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRSI 181
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 182 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 241
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 242 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 301
Query: 325 CRRVNGNS 332
CR VN NS
Sbjct: 302 CRVVNSNS 309
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/305 (63%), Positives = 228/305 (74%), Gaps = 1/305 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++RLHFHDCFV+GCDASILLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTS 60
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVAL G HTFG+ QC+F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRFI 180
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 325 CRRVN 329
CR VN
Sbjct: 301 CRVVN 305
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/308 (62%), Positives = 229/308 (74%), Gaps = 1/308 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY ++CPNV N + D + SD RI AS++ LHF DCFV+GCDASILLD+T +
Sbjct: 1 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTS 60
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+EK A N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VP
Sbjct: 61 FRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVP 120
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS A LAN NLP PF TL +LK SFRNVGLN DLVALSG HTFG+ QC+F
Sbjct: 121 LGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFI 180
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+LQ LR LCP GN L +FD+ TP +FDNKY+ NL +
Sbjct: 181 MDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQ 240
Query: 266 KGLLQSDQELFSTPGA-DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLN 324
KGL+QSDQELFS+P A DT +V F + FF FV +M RMGN+ PLTG QG+IRLN
Sbjct: 241 KGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLN 300
Query: 325 CRRVNGNS 332
CR VN NS
Sbjct: 301 CRVVNSNS 308
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/305 (60%), Positives = 228/305 (74%), Gaps = 1/305 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+ +FYS TCPN + +++A SD RIGASLIRLHFHDCFV+GCDASILLD T +
Sbjct: 2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGS 61
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
I SEK A PN NSARGF V+DN+K A+E ACP VVSC+D+L +A+E SV+L+GGPSW V
Sbjct: 62 IQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVL 121
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS TAN A AN ++P P ++L + F VGLN DLVALSGAHTFGRA+C F
Sbjct: 122 LGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALSGAHTFGRARCGVF 180
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RL++F+ TG PDPTL++T L L++LCPQ G+ + N D++TPD FDN YF+NL+
Sbjct: 181 NNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSN 240
Query: 266 KGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 325
GLLQSDQELFST G+ T AIV F NQ FF+ F SMI MGN+ PLTG+ GEIRL+C
Sbjct: 241 DGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 300
Query: 326 RRVNG 330
++VNG
Sbjct: 301 KKVNG 305
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/305 (62%), Positives = 226/305 (74%), Gaps = 1/305 (0%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QL+P+FY TCPN+ + V+ A +D RIGASL+RLHFHDCFV GCD S+LL++T+T
Sbjct: 1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDT 60
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
I+SE+ A PN NS RG +V++++K AVE +CP VSCADIL IAAE + L GGP W VP
Sbjct: 61 IESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVP 120
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGRRDS TANR LANQNLP PF L +LK+SF GLN LDLV LSG HTFGRA+C F
Sbjct: 121 LGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLN-TLDLVTLSGGHTFGRARCSTF 179
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RLY+F+NTG PDPTL+ T+L+ LR CPQ G L N D++TPD FDN+Y+SNL
Sbjct: 180 INRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQL 239
Query: 266 KGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNC 325
GLLQSDQELFSTPGADT IV F NQN FF NF SMI+MGN+ LTG++GEIRL C
Sbjct: 240 NGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQC 299
Query: 326 RRVNG 330
VNG
Sbjct: 300 NFVNG 304
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 367 bits (942), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/304 (59%), Positives = 223/304 (73%), Gaps = 1/304 (0%)
Query: 27 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTI 86
L+ +FY+ TCPN + ++++AF SD RIGASLIRLHFHDCFV GCDASILLD++ +I
Sbjct: 4 LNATFYAGTCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSGSI 63
Query: 87 DSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPL 146
SEK A PN NSARGF V+DN+K A+E ACP VVSC D+L +A++ SV+LSGGPSW V L
Sbjct: 64 ISEKNAGPNANSARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTVDL 123
Query: 147 GRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFR 206
GRRD+ TAN+A AN ++P P L + S F VGLN DLVALSGAHTFGRA C F
Sbjct: 124 GRRDTLTANQAGANSSIPSPTQGLSNITSKFSAVGLNTN-DLVALSGAHTFGRATCGVFS 182
Query: 207 GRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRK 266
RL++F+ G PDPTL+ T L L++LCPQ G G N D++TPD FDN YF+NL+
Sbjct: 183 NRLFNFSGKGNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNYFTNLQSNN 242
Query: 267 GLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 326
GLLQSDQELFST G+ T AIV F NQ FF+ F SMI MGN+ PLTG+ GEIRL+C+
Sbjct: 243 GLLQSDQELFSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSSGEIRLDCK 302
Query: 327 RVNG 330
+ NG
Sbjct: 303 KTNG 306
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 330 bits (846), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 169/306 (55%), Positives = 209/306 (68%), Gaps = 9/306 (2%)
Query: 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT 85
QLSP Y+ +CPN++ + + A ++IR+ ASLIRLHFHDCFV+GCDAS+LLD
Sbjct: 1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA-- 58
Query: 86 IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
DSEK A PN NSARGFEVID +KAAVE ACP VVSCADILT+AA SV LSGGP W V
Sbjct: 59 -DSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVA 117
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFF 205
LGR+D AN+ AN NLP PF+ LD + + F V LN D+VALSGAHTFG+A+C F
Sbjct: 118 LGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLNIT-DVVALSGAHTFGQAKCAVF 175
Query: 206 RGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265
RL++F G PD TL+ + L L+ +CP GGN + A D +T D FDN YF NL
Sbjct: 176 SNRLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEG 235
Query: 266 KGLLQSDQELFSTPGA--DTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRL 323
KGLL SDQ LFS+ A T +VE + R+Q+ FF++F +MIRMGN+ G GE+R
Sbjct: 236 KGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRT 293
Query: 324 NCRRVN 329
NCR +N
Sbjct: 294 NCRVIN 299
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 312 bits (800), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 160/303 (52%), Positives = 201/303 (66%), Gaps = 10/303 (3%)
Query: 27 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTI 86
LS +FY++ CPN L+TI+ + A + + R+GASL+RLHFHDCFV GCDAS+LLD T+
Sbjct: 2 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNF 61
Query: 87 DSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPL 146
EK A PN NS RGFEVID +K+ VE CP VVSCADIL +AA SV GG SW V L
Sbjct: 62 TGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLL 121
Query: 147 GRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFR 206
GRRDS TA+ + AN +LP PF L L S+F N G K +LV LSGAHT G+AQC FR
Sbjct: 122 GRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTK-ELVTLSGAHTIGQAQCTAFR 180
Query: 207 GRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRK 266
R+Y+ +N +D T+ + L+ CP G L+ FDVTTP+ FDN Y+ NLR +K
Sbjct: 181 TRIYNESN-------IDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKK 233
Query: 267 GLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 326
GLL SDQ+LF+ G T + V + N F +F +MI+MGNL PLTG G+IR NCR
Sbjct: 234 GLLHSDQQLFN--GVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCR 291
Query: 327 RVN 329
+ N
Sbjct: 292 KTN 294
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 241 bits (615), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/301 (43%), Positives = 179/301 (59%), Gaps = 5/301 (1%)
Query: 31 FYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEK 90
FY+++CP + ++ + AF+++ I LIR+HFHDCFV GCDAS+LLDST +EK
Sbjct: 6 FYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEK 65
Query: 91 FAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRD 150
A PNN S RGFEVI K+AVE ACP+ VSCADIL AA S L+G ++ VP GRRD
Sbjct: 66 DAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRD 125
Query: 151 SRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLY 210
+ + AN +P P +L +SF N L ++V LSGAH+ G A C F RLY
Sbjct: 126 GTVSLASEANAQIPSPLFNATQLINSFANKTLTAD-EMVTLSGAHSIGVAHCSSFTNRLY 184
Query: 211 DFNNTGKPDPTLDATFLQQLRKLCPQGGN--GGVLANFDVTTPDVFDNKYFSNLRGRKGL 268
+FN+ DPTL ++ LR CP + + D+ TP V DN Y++ ++ GL
Sbjct: 185 NFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLTLGL 244
Query: 269 LQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRV 328
L SDQ L + A+ +A V+ N A+ F +M++MG ++ LTG QGEIR NC V
Sbjct: 245 LTSDQALVTE--ANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVV 302
Query: 329 N 329
N
Sbjct: 303 N 303
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 233 bits (595), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 182/307 (59%), Gaps = 12/307 (3%)
Query: 22 PSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLD 81
P LS FY TCP + + + +++A DI + A L+RLHFHDCFV GCDAS+LLD
Sbjct: 4 PVAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLD 63
Query: 82 STNTIDSEKFAAPN-NNSARGFEVIDNMKAAVERACP-RVVSCADILTIAAERSVALSGG 139
+ T E+ A PN F+ +++++ +ER C VVSC+DIL +AA SV +SGG
Sbjct: 64 GSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGG 123
Query: 140 PSWAVPLGRRDSRT-ANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFG 198
P + VPLGRRDSR+ A+ +LPGP + + + D DLV +SG HT G
Sbjct: 124 PDYRVPLGRRDSRSFASTQDVLSDLPGPSSNV-QSLLALLGRLGLDATDLVTISGGHTIG 182
Query: 199 RAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKY 258
A C F RL+ +PDPT+ TFL +L++ CP G DV TP+VFDNKY
Sbjct: 183 LAHCSSFEDRLFP-----RPDPTISPTFLSRLKRTCPAKGTDRRTV-LDVRTPNVFDNKY 236
Query: 259 FSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQ 318
+ +L R+GL SDQ+LF+ A T IVE F ++Q FF+ F S+ +MG ++ T +Q
Sbjct: 237 YIDLVNREGLFVSDQDLFTN--AITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQ 294
Query: 319 GEIRLNC 325
GE+R NC
Sbjct: 295 GEVRRNC 301
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 120 VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLP--GPFDTLDELKSSF 177
V+ AD+ +A+ ++ +GGP + GR D + LP GP L+ F
Sbjct: 87 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVF 146
Query: 178 RNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQG 237
+GLNDK ++VALSGAHT GR++ D + GKP+ + K P G
Sbjct: 147 YRMGLNDK-EIVALSGAHTLGRSRP--------DRSGWGKPE--------TKYTKDGP-G 188
Query: 238 GNGGVLANFDVTTPDVFDNKYFSNLRGRKG----LLQSDQELFSTPGADTAAIVEDFGRN 293
GG FDN YF +++ R+ +L +D LF P A E + +
Sbjct: 189 APGGQSWTAQWLK---FDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYA--EKYAAD 243
Query: 294 QNAFFKNFVTSMIRMGNL 311
AFFK++ + ++ NL
Sbjct: 244 PEAFFKDYAEAHAKLSNL 261
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 42/277 (15%)
Query: 43 IEDVLKKAFSSDIRIGASLIRLHFH-----DCFV-DGCDASILLDSTNTIDSEKFAAPNN 96
IED++ S + +G SLIRL +H DCF DG S ++ E A N
Sbjct: 16 IEDMI----SEKLELGPSLIRLAWHEAASYDCFKKDGSPNS----ASMRFKPECLYAGN- 66
Query: 97 NSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANR 156
+G ++ +++ P++ S AD+ +AA ++ GGP+ GR D++ +
Sbjct: 67 ---KGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSV 122
Query: 157 ALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQF--FRGRLYDFNN 214
+ LP T ++ FR +G ND+ + VAL GAHT G +F + G + +
Sbjct: 123 CGPDGRLPDGSKTQSHVREVFRRLGFNDQ-ETVALIGAHTCGECHIEFSGYHGP-WTHDK 180
Query: 215 TGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQE 274
G D +F QL L V P V + + +L SD
Sbjct: 181 NG-----FDNSFFTQL------------LDEDWVLNPKVEQMQLMDRATTKLMMLPSDVC 223
Query: 275 LFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
L P VE + ++ + F K+F + ++ L
Sbjct: 224 LLLDPS--YRKYVELYAKDNDRFNKDFANAFKKLTEL 258
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 42/277 (15%)
Query: 43 IEDVLKKAFSSDIRIGASLIRLHFH-----DCFV-DGCDASILLDSTNTIDSEKFAAPNN 96
IED++ S + +G SLIRL +H DCF DG S ++ E A N
Sbjct: 15 IEDMI----SEKLELGPSLIRLAWHEAASYDCFKKDGSPNS----ASMRFKPECLYAGN- 65
Query: 97 NSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANR 156
+G ++ +++ P++ S AD+ +AA ++ GGP+ GR D++ +
Sbjct: 66 ---KGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSV 121
Query: 157 ALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQF--FRGRLYDFNN 214
+ LP T ++ FR +G ND+ + VAL GAHT G +F + G + +
Sbjct: 122 CGPDGRLPDGSKTQSHVREVFRRLGFNDQ-ETVALIGAHTCGECHIEFSGYHGP-WTHDK 179
Query: 215 TGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQE 274
G D +F QL L V P V + + +L SD
Sbjct: 180 NG-----FDNSFFTQL------------LDEDWVLNPKVEQMQLMDRATTKLMMLPSDVC 222
Query: 275 LFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
L P VE + ++ + F K+F + ++ L
Sbjct: 223 LLLDPS--YRKYVELYAKDNDRFNKDFANAFKKLTEL 257
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 42/277 (15%)
Query: 43 IEDVLKKAFSSDIRIGASLIRLHFH-----DCFV-DGCDASILLDSTNTIDSEKFAAPNN 96
IED++ S + +G SLIRL +H DCF DG S ++ E A N
Sbjct: 16 IEDMI----SEKLELGPSLIRLAWHEAASYDCFKKDGSPNS----ASMRFKPECLYAGN- 66
Query: 97 NSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANR 156
+G ++ +++ P++ S AD+ +AA ++ GGP+ GR D++ +
Sbjct: 67 ---KGLDIPRKALETLKKKYPQI-SYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSV 122
Query: 157 ALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQF--FRGRLYDFNN 214
+ LP T ++ FR +G ND+ + VAL GAHT G +F + G + +
Sbjct: 123 CGPDGRLPDGSKTQSHVREVFRRLGFNDQ-ETVALIGAHTCGETHIEFSGYHGP-WTHDK 180
Query: 215 TGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQE 274
G D +F QL L V P V + + +L SD
Sbjct: 181 NG-----FDNSFFTQL------------LDEDWVLNPKVEQMQLMDRATTKLMMLPSDVC 223
Query: 275 LFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
L P VE + ++ + F K+F + ++ L
Sbjct: 224 LLLDPS--YRKYVELYAKDNDRFNKDFANAFKKLTEL 258
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 118/300 (39%), Gaps = 79/300 (26%)
Query: 32 YSSTCPNVLNTIEDVLKK--AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSE 89
Y + P+ IE +K F ++ + ++RL +H S T DS+
Sbjct: 4 YPTVSPDYQKAIEKAKRKLRGFIAEKKCAPLILRLAWH--------------SAGTFDSK 49
Query: 90 -KFAAP----------NNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSG 138
K P + + G ++ + ++ P +VS AD +A +V ++G
Sbjct: 50 TKTGGPFGTIKHQAELAHGANNGLDIAVRLLEPIKEQFP-IVSYADFYQLAGVVAVEITG 108
Query: 139 GPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSF-RNVGLNDKLDLVALSGAHTF 197
GP GR D LP D L+ F + +GL+D+ D+VALSG HT
Sbjct: 109 GPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQ-DIVALSGGHTI 164
Query: 198 GRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNK 257
G A + +G P + P +FDN
Sbjct: 165 GAAHKE----------RSGFEGPW--------------------------TSNPLIFDNS 188
Query: 258 YFSN-LRGRK-GLLQ--SDQELFSTPGADTA--AIVEDFGRNQNAFFKNFVTSMIRMGNL 311
YF+ L G K GLLQ SD+ L + D+ +VE + +++ FF ++ + +++ L
Sbjct: 189 YFTELLTGEKDGLLQLPSDKALLT----DSVFRPLVEKYAADEDVFFADYAEAHLKLSEL 244
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 113/289 (39%), Gaps = 57/289 (19%)
Query: 32 YSSTCPNVLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC--FVDGCDASILLDSTNTID 87
Y + + +E KK F ++ R ++RL +H F G T
Sbjct: 16 YPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPF-GTIKHP 74
Query: 88 SEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLG 147
+E + NN +++ +KA ++S AD +A +V ++GGP G
Sbjct: 75 AELAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPG 129
Query: 148 RRDSRTANRALANQNLPGPFDTLDELKSSF-RNVGLNDKLDLVALSGAHTFGRAQCQFFR 206
R D LP D L+ F + +GL D+ D+VALSG HT G A +
Sbjct: 130 REDKPEPP---PEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAHKE--- 182
Query: 207 GRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRG-- 264
G G +N P +FDN YF+ L
Sbjct: 183 ----------------------------ASGFEGPWTSN-----PLIFDNSYFTELLSGE 209
Query: 265 RKGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
++GLLQ SD+ L S P +V+ + +++AFF ++ + ++ L
Sbjct: 210 KEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 113/289 (39%), Gaps = 57/289 (19%)
Query: 32 YSSTCPNVLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC--FVDGCDASILLDSTNTID 87
Y + + +E KK F ++ R ++RL +H F G T
Sbjct: 16 YPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPF-GTIKHP 74
Query: 88 SEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLG 147
+E + NN +++ +KA ++S AD +A +V ++GGP G
Sbjct: 75 AELAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPG 129
Query: 148 RRDSRTANRALANQNLPGPFDTLDELKSSF-RNVGLNDKLDLVALSGAHTFGRAQCQFFR 206
R D LP D L+ F + +GL D+ D+VALSG HT G A +
Sbjct: 130 REDK---PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAHKER-- 183
Query: 207 GRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRG-- 264
G G +N P +FDN YF+ L
Sbjct: 184 -----------------------------SGFEGPWTSN-----PLIFDNSYFTELLSGE 209
Query: 265 RKGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
++GLLQ SD+ L S P +V+ + +++AFF ++ + ++ L
Sbjct: 210 KEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 113/289 (39%), Gaps = 57/289 (19%)
Query: 32 YSSTCPNVLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC--FVDGCDASILLDSTNTID 87
Y + + +E KK F ++ R ++RL +H F G T
Sbjct: 4 YPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPF-GTIKHP 62
Query: 88 SEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLG 147
+E + NN +++ +KA ++S AD +A +V ++GGP G
Sbjct: 63 AELAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPG 117
Query: 148 RRDSRTANRALANQNLPGPFDTLDELKSSF-RNVGLNDKLDLVALSGAHTFGRAQCQFFR 206
R D LP D L+ F + +GL D+ D+VALSG HT G A +
Sbjct: 118 REDK---PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAHKE--- 170
Query: 207 GRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRG-- 264
+G P + P +FDN YF+ L
Sbjct: 171 -------RSGFEGPW--------------------------TSNPLIFDNSYFTELLSGE 197
Query: 265 RKGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
++GLLQ SD+ L S P +V+ + +++AFF ++ + ++ L
Sbjct: 198 KEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSEL 244
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 113/289 (39%), Gaps = 57/289 (19%)
Query: 32 YSSTCPNVLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC--FVDGCDASILLDSTNTID 87
Y + + +E KK F ++ R ++RL +H F G T
Sbjct: 16 YPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAWHSAGTFDKGTKTGGPF-GTIKHP 74
Query: 88 SEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLG 147
+E + NN +++ +KA ++S AD +A +V ++GGP G
Sbjct: 75 AELAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPG 129
Query: 148 RRDSRTANRALANQNLPGPFDTLDELKSSF-RNVGLNDKLDLVALSGAHTFGRAQCQFFR 206
R D LP D L+ F + +GL D+ D+VALSG HT G A +
Sbjct: 130 REDKPEPP---PEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAHKER-- 183
Query: 207 GRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRG-- 264
G G +N P +FDN YF+ L
Sbjct: 184 -----------------------------SGFEGPWTSN-----PLIFDNSYFTELLSGE 209
Query: 265 RKGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
++GLLQ SD+ L S P +V+ + +++AFF ++ + ++ L
Sbjct: 210 KEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 57/289 (19%)
Query: 32 YSSTCPNVLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC--FVDGCDASILLDSTNTID 87
Y + + +E KK F ++ R +++L +H F G T
Sbjct: 4 YPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLKLAWHSAGTFDKGTKTGGPF-GTIKHP 62
Query: 88 SEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLG 147
+E + NN +++ +KA ++S AD +A +V ++GGP G
Sbjct: 63 AELAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPG 117
Query: 148 RRDSRTANRALANQNLPGPFDTLDELKSSF-RNVGLNDKLDLVALSGAHTFGRAQCQFFR 206
R D LP D L+ F + +GL D+ D+VALSG HT G A +
Sbjct: 118 REDK---PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAHKE--- 170
Query: 207 GRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRG-- 264
+G P + P +FDN YF+ L
Sbjct: 171 -------RSGFEGPW--------------------------TSNPLIFDNSYFTELLSGE 197
Query: 265 RKGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
++GLLQ SD+ L S P +V+ + +++AFF ++ + ++ L
Sbjct: 198 KEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSEL 244
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 114/291 (39%), Gaps = 61/291 (20%)
Query: 32 YSSTCPNVLNTIEDVLKK--AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT---I 86
Y + + +E KK F ++ R ++RL C A T T
Sbjct: 16 YPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLA-------ACSAGTFDKGTKTGGPF 68
Query: 87 DSEKFAAPNNNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVP 145
+ K A +SA G ++ + ++ P ++S AD +A +V ++GGP
Sbjct: 69 GTIKHPAELAHSANNGLDIAVRLLEPLKAEFP-ILSYADFYQLAGVVAVEVTGGPEVPFH 127
Query: 146 LGRRDSRTANRALANQNLPGPFDTLDELKSSF-RNVGLNDKLDLVALSGAHTFGRAQCQF 204
GR D LP D L+ F + +GL D+ D+VALSG HT G A +
Sbjct: 128 PGREDKPEPP---PEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAHKER 183
Query: 205 FRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRG 264
G G +N P +FDN YF+ L
Sbjct: 184 -------------------------------SGFEGPWTSN-----PLIFDNSYFTELLS 207
Query: 265 --RKGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
++GLLQ SD+ L S P +V+ + +++AFF ++ + ++ L
Sbjct: 208 GEKEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 112/289 (38%), Gaps = 57/289 (19%)
Query: 32 YSSTCPNVLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC--FVDGCDASILLDSTNTID 87
Y + + +E KK F ++ R ++RL H F G T
Sbjct: 16 YPTVSADYQKAVEKAKKKLRGFIAEKRCAPLMLRLAAHSAGTFDKGTKTGGPF-GTIKHP 74
Query: 88 SEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLG 147
+E + NN +++ +KA ++S AD +A +V ++GGP G
Sbjct: 75 AELAHSANNGLDIAVRLLEPLKAEFP-----ILSYADFYQLAGVVAVEVTGGPEVPFHPG 129
Query: 148 RRDSRTANRALANQNLPGPFDTLDELKSSF-RNVGLNDKLDLVALSGAHTFGRAQCQFFR 206
R D LP D L+ F + +GL D+ D+VALSG HT G A +
Sbjct: 130 REDK---PEPPPEGRLPDATKGSDHLRDVFGKAMGLTDQ-DIVALSGGHTIGAAHKER-- 183
Query: 207 GRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRG-- 264
G G +N P +FDN YF+ L
Sbjct: 184 -----------------------------SGFEGPWTSN-----PLIFDNSYFTELLSGE 209
Query: 265 RKGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNL 311
++GLLQ SD+ L S P +V+ + +++AFF ++ + ++ L
Sbjct: 210 KEGLLQLPSDKALLSDP--VFRPLVDKYAADEDAFFADYAEAHQKLSEL 256
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 47/198 (23%)
Query: 119 VVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSF- 177
++S AD +A +V ++GGP GR D LP D L+ F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPP---PEGRLPDATKGSDHLRDVFG 145
Query: 178 RNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQG 237
+ +GL D+ D+VALSG HT G A + +G P
Sbjct: 146 KAMGLTDQ-DIVALSGGHTIGAAHKE----------RSGFEGPW---------------- 178
Query: 238 GNGGVLANFDVTTPDVFDNKYFSNLRG--RKGLLQ--SDQELFSTPGADTAAIVEDFGRN 293
+ P +FDN YF+ L ++GLLQ SD+ L S P +V+ + +
Sbjct: 179 ----------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 226
Query: 294 QNAFFKNFVTSMIRMGNL 311
++AFF ++ + ++ L
Sbjct: 227 EDAFFADYAEAHQKLSEL 244
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 47/198 (23%)
Query: 119 VVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSF- 177
++S AD +A +V ++GGP GR D LP D L+ F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPP---PEGRLPDATKGSDHLRDVFG 157
Query: 178 RNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQG 237
+ +GL D+ D+VALSG HT G A + G
Sbjct: 158 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 185
Query: 238 GNGGVLANFDVTTPDVFDNKYFSNLRG--RKGLLQ--SDQELFSTPGADTAAIVEDFGRN 293
G +N P +FDN YF+ L ++GLLQ SD+ L S P +V+ + +
Sbjct: 186 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 238
Query: 294 QNAFFKNFVTSMIRMGNL 311
++AFF ++ + ++ L
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 47/198 (23%)
Query: 119 VVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSF- 177
++S AD +A +V ++GGP GR D LP D L+ F
Sbjct: 89 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDK---PEPPPEGRLPDATKGSDHLRDVFG 145
Query: 178 RNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQG 237
+ +GL D+ D+VALSG HT G A + +G P
Sbjct: 146 KAMGLTDQ-DIVALSGGHTIGAAHKE----------RSGFEGPW---------------- 178
Query: 238 GNGGVLANFDVTTPDVFDNKYFSNLRG--RKGLLQ--SDQELFSTPGADTAAIVEDFGRN 293
+ P +FDN YF+ L ++GLLQ SD+ L S P +V+ + +
Sbjct: 179 ----------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 226
Query: 294 QNAFFKNFVTSMIRMGNL 311
++AFF ++ + ++ L
Sbjct: 227 EDAFFADYAEAHQKLSEL 244
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 47/198 (23%)
Query: 119 VVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSF- 177
++S AD +A +V ++GGP GR D LP D L+ F
Sbjct: 101 ILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPP---PEGRLPDATKGSDHLRDVFG 157
Query: 178 RNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQG 237
+ +GL D+ D+VALSG HT G A + G
Sbjct: 158 KAMGLTDQ-DIVALSGGHTIGAAHKER-------------------------------SG 185
Query: 238 GNGGVLANFDVTTPDVFDNKYFSNLRG--RKGLLQ--SDQELFSTPGADTAAIVEDFGRN 293
G +N P +FDN YF+ L ++GLLQ SD+ L S P +V+ + +
Sbjct: 186 FEGPWTSN-----PLIFDNSYFTELLSGEKEGLLQLPSDKALLSDP--VFRPLVDKYAAD 238
Query: 294 QNAFFKNFVTSMIRMGNL 311
++AFF ++ + ++ L
Sbjct: 239 EDAFFADYAEAHQKLSEL 256
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 112/293 (38%), Gaps = 68/293 (23%)
Query: 39 VLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC-FVDGCDASILLDSTNTIDSEKFAAPN 95
V N I L++ + + I G L+RL +H D D + ++F P+
Sbjct: 22 VYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPS 81
Query: 96 NNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTA 154
N + GF+ ++ + + P +S D+ ++ +V GP GR D+
Sbjct: 82 NAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT-PE 135
Query: 155 NRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN 214
+ N LP D +++ F+ + +ND+ ++VAL GAHT G+ + N
Sbjct: 136 DTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHTLGKTHLK----------N 184
Query: 215 TGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKG------- 267
+G P P+VFDN ++ NL
Sbjct: 185 SGYEGPW--------------------------TANPNVFDNSFYLNLLNEDWKLEKNDA 218
Query: 268 ------------LLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRM 308
+L +D L P +IV+++ +Q+ FFK+F + ++
Sbjct: 219 NNEQWDSKSGYMMLPTDYSLIQDP--KYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 114/293 (38%), Gaps = 68/293 (23%)
Query: 39 VLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC-FVDGCDASILLDSTNTIDSEKFAAPN 95
V N I L++ + + I G L+RL +H D D + ++F P+
Sbjct: 22 VYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPS 81
Query: 96 NNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTA 154
N + GF+ ++ + + P +S D+ ++ +V GP GR D+
Sbjct: 82 NAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT-PE 135
Query: 155 NRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN 214
+ N LP D +++ F+ + +ND+ ++VALSGAHT G+ + N
Sbjct: 136 DTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALSGAHTLGKTHLK----------N 184
Query: 215 TGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNL------------ 262
+G P +VFDN ++ NL
Sbjct: 185 SGYEGPW--------------------------TANNNVFDNSFYLNLLNEDWKLEKNDA 218
Query: 263 -----RGRKGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRM 308
+ G LQ +D L P +IV+++ +Q+ FFK+F + ++
Sbjct: 219 NNEQWDSKSGYLQLPTDYSLIQDP--KYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 112/293 (38%), Gaps = 68/293 (23%)
Query: 39 VLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC-FVDGCDASILLDSTNTIDSEKFAAPN 95
V N I L++ + + I G L+RL +H D D + ++F P+
Sbjct: 22 VYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPS 81
Query: 96 NNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTA 154
N + GF+ ++ + + P +S D+ ++ +V GP GR D+
Sbjct: 82 NAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT-PE 135
Query: 155 NRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN 214
+ N LP D +++ F+ + +ND+ ++VAL GAHT G+ +
Sbjct: 136 DTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHTLGKTHLK----------- 183
Query: 215 TGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKG------- 267
N G +D T +VFDN ++ NL
Sbjct: 184 ------------------------NSGYEGPWDATN-NVFDNSFYLNLLNEDWKLEKNDA 218
Query: 268 ------------LLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRM 308
+L +D L P +IV+++ +Q+ FFK+F + ++
Sbjct: 219 NNEQWDSKSGYMMLPTDYSLIQDP--KYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 113/293 (38%), Gaps = 68/293 (23%)
Query: 39 VLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC-FVDGCDASILLDSTNTIDSEKFAAPN 95
V N I L++ + + I G L+RL +H D D + ++F P+
Sbjct: 22 VYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPS 81
Query: 96 NNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTA 154
N + GF+ ++ + + P +S D+ ++ +V GP GR D+
Sbjct: 82 NAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT-PE 135
Query: 155 NRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN 214
+ N LP D +++ F+ + +ND+ ++VAL GAHT G+ + N
Sbjct: 136 DTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHTLGKTHLK----------N 184
Query: 215 TGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNL------------ 262
+G P +VFDN ++ NL
Sbjct: 185 SGYEGPW--------------------------TANNNVFDNSFYLNLLNEDWKLEKNDA 218
Query: 263 -----RGRKGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRM 308
+ G LQ +D L P +IV+++ +Q+ FFK+F + ++
Sbjct: 219 NNEQWDSKSGYLQLPTDYSLIQDP--KYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 114/276 (41%), Gaps = 34/276 (12%)
Query: 39 VLNTIEDVLKK--AFSSDIRIGASLIRLHFHDC-FVDGCDASILLDSTNTIDSEKFAAPN 95
V N I L++ + + I G L+RL +H D D + ++F P+
Sbjct: 22 VYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPS 81
Query: 96 NNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTA 154
N + GF+ ++ + + P +S D+ ++ +V GP GR D+
Sbjct: 82 NAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT-PE 135
Query: 155 NRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQ--FFRGRLYDF 212
+ N LP D +++ F+ + +ND+ ++VAL GAHT G+ + + G
Sbjct: 136 DTTPDNGRLPDADKDADYVRTFFQRLNMNDR-EVVALMGAHTLGKTHLKNSGYEGPWTAN 194
Query: 213 NNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSD 272
NN D + L + KL N N+ + + G +L +D
Sbjct: 195 NNVF--DNSFYLNLLNEDWKLEKNDAN----------------NEQWDSKSGYM-MLPTD 235
Query: 273 QELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRM 308
L P +IV+++ +Q+ FFK+F + ++
Sbjct: 236 YSLIQDP--KYLSIVKEYANDQDKFFKDFSKAFEKL 269
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 113/295 (38%), Gaps = 83/295 (28%)
Query: 62 IRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVER 114
+RL FHD G D SI+ + +TI++ P N E++ K V +
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII--AFDTIETN---FPANAGID--EIVSAQKPFVAK 94
Query: 115 ACPRVVSCADILTIAAERSVA-LSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDEL 173
+S D + A V+ GG LGR D+ A+ + +PGPFD++D +
Sbjct: 95 ---HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAAS---PDHLVPGPFDSVDSI 148
Query: 174 KSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 233
+ + G + +++V L +H+ A K DP++ T
Sbjct: 149 LARMGDAGFS-PVEVVWLLASHSIAAAD---------------KVDPSIPGT-------- 184
Query: 234 CPQGGNGGVLANFDVTTPDVFDNKYF--SNLRGR--------KG----------LLQSDQ 273
FD +TP+VFD+++F + L+GR KG LQSD
Sbjct: 185 -----------PFD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDH 232
Query: 274 ELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRV 328
L P TA + NQ F +M +M L G ++C V
Sbjct: 233 LLARDP--QTACEWQSMVNNQPKIQNRFAATMSKMA----LLGQDKTKLIDCSDV 281
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 317
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 113/295 (38%), Gaps = 83/295 (28%)
Query: 62 IRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVER 114
+RL FHD G D SI+ + +TI++ P N E++ K V +
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII--AFDTIETNF---PANAGID--EIVSAQKPFVAK 94
Query: 115 ACPRVVSCADILTIAAERSVA-LSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDEL 173
+S D + A V+ GG LGR D+ A+ + +PGPFD++D +
Sbjct: 95 ---HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAAS---PDHLVPGPFDSVDSI 148
Query: 174 KSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 233
+ + G + +++V L +H+ A K DP++ T
Sbjct: 149 LARMGDAGFS-PVEVVWLLASHSIAAAD---------------KVDPSIPGT-------- 184
Query: 234 CPQGGNGGVLANFDVTTPDVFDNKYF--SNLRGR--------KG----------LLQSDQ 273
FD +TP+VFD+++F + L+GR KG LQSD
Sbjct: 185 -----------PFD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDH 232
Query: 274 ELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRV 328
L P TA + NQ F +M +M L G ++C V
Sbjct: 233 LLARDP--QTACEWQSMVNNQPKIQNRFAATMSKMA----LLGQDKTKLIDCSDV 281
>pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 319
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 112/295 (37%), Gaps = 83/295 (28%)
Query: 62 IRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVER 114
+RL FHD G D SI+ + +TI++ P N E++ K V +
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII--AFDTIETNF---PANAGID--EIVSAQKPFVAK 94
Query: 115 ACPRVVSCADILTIAAERSVA-LSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDEL 173
+S D + A V+ GG LGR D+ A+ + +PGPFD++D +
Sbjct: 95 ---HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAAS---PDHLVPGPFDSVDSI 148
Query: 174 KSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 233
+ + G + +++V L +H+ A DP++ T
Sbjct: 149 LARMGDAGFS-PVEVVWLLASHSIAAADGV---------------DPSIPGT-------- 184
Query: 234 CPQGGNGGVLANFDVTTPDVFDNKYF--SNLRGR--------KG----------LLQSDQ 273
FD +TP+VFD+++F + L+GR KG LQSD
Sbjct: 185 -----------PFD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDH 232
Query: 274 ELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRV 328
L P TA + NQ F +M +M L G ++C V
Sbjct: 233 LLARDP--QTACEWQSMVNNQPKIQNRFAATMSKMA----LLGQDKTKLIDCSDV 281
>pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase
Length = 331
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 113/296 (38%), Gaps = 85/296 (28%)
Query: 62 IRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGF-EVIDNMKAAVE 113
+RL FHD G D SI+ + +TI++ N + G E++ K V
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII--AFDTIET------NFPANAGIDEIVSAQKPFVA 93
Query: 114 RACPRVVSCADILTIAAERSVA-LSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDE 172
+ +S D + A V+ GG LGR D+ A+ + +P PFD++D
Sbjct: 94 K---HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAAS---PDHLVPEPFDSVDS 147
Query: 173 LKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 232
+ + + G + +++V L +H+ A K DP++ T
Sbjct: 148 ILARMGDAGFS-PVEVVWLLASHSIAAAD---------------KVDPSIPGT------- 184
Query: 233 LCPQGGNGGVLANFDVTTPDVFDNKYF--SNLRGR--------KG----------LLQSD 272
FD +TP+VFD+++F + L+GR KG LQSD
Sbjct: 185 ------------PFD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSD 231
Query: 273 QELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRV 328
L P TA + NQ F +M +M L G ++C V
Sbjct: 232 HLLARDP--QTACEWQSMVNNQPKIQNRFAATMSKMA----LLGQDKTKLIDCSDV 281
>pdb|4EKJ|A Chain A, Crystal Structure Of A Monomeric Beta-xylosidase From
Caulobacter Crescentus Cb15
Length = 500
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 18/114 (15%)
Query: 234 CPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGR- 292
P G G++ + P F KY + ++GR+ L+ +D ++F+ D AIV R
Sbjct: 332 APFQGGFGLMNPQGIRKPSWFAYKYLNAIKGRE-LVCADDQVFAARDGDRVAIVAYAWRQ 390
Query: 293 -NQNAFFKNFVTSM----------IRMGNLKPLTGNQGEIRLNCRRVNGNSNIA 335
+Q + F T + +R+ +LKP G +L RRV N A
Sbjct: 391 PDQKVSNRPFYTKLHPASDVEPLKVRLTSLKP-----GRYKLRVRRVGYRRNDA 439
>pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 114/295 (38%), Gaps = 83/295 (28%)
Query: 62 IRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVER 114
+RL FHD G D SI+ + +TI++ F A +A E++ K V +
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII--AFDTIET-NFPA----NAGIDEIVSAQKPFVAK 94
Query: 115 ACPRVVSCADILTIAAERSVA-LSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDEL 173
+S D + A V+ GG LGR D+ A+ + +P PFD++D +
Sbjct: 95 ---HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAAS---PDHLVPEPFDSVDSI 148
Query: 174 KSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 233
+ + G + +++V L +H+ A K DP++ T
Sbjct: 149 LARMGDAGFS-PVEVVWLLASHSIAAAD---------------KVDPSIPGT-------- 184
Query: 234 CPQGGNGGVLANFDVTTPDVFDNKYF--SNLRGR--------KG----------LLQSDQ 273
FD +TP+VFD+++F + L+GR KG LQSD
Sbjct: 185 -----------PFD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDH 232
Query: 274 ELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRV 328
L P TA + NQ F +M +M L G ++C V
Sbjct: 233 LLARDP--QTACEWQSMVNNQPKIQNRFAATMSKMA----LLGQDKTKLIDCSDV 281
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
pdb|2ICV|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned
Manganese-Binding Site In Cytochrome C Peroxidase
Length = 291
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 34/276 (12%)
Query: 39 VLNTIEDVLKK--AFSSDIRIGASLIRLHFH-DCFVDGCDASILLDSTNTIDSEKFAAPN 95
V N I L++ + + I G L+RL +H D D + ++F P+
Sbjct: 19 VYNAIALKLREDDEYENYIGYGPELVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPS 78
Query: 96 NNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTA 154
N + GF+ ++ + + P +S D+ ++ +V GP GR D+
Sbjct: 79 NAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT-PE 132
Query: 155 NRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQ--FFRGRLYDF 212
+ N LP +++ F+ + +ND+ ++VAL GAH G+ + + + G
Sbjct: 133 DTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALMGAHALGKTELKNSGYEGPWGAA 191
Query: 213 NNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSD 272
NN + L+ L + KL N N+ + + G +L +D
Sbjct: 192 NNVFTNEFYLN--LLNEDWKLEKNDAN----------------NEQWDSKSGYM-MLPTD 232
Query: 273 QELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRM 308
L P +IV+++ +Q+ FFK+F + ++
Sbjct: 233 YSLIQDP--KYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X
Hydrogen Bond By Introducing Buried Charges
Length = 291
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 113/276 (40%), Gaps = 34/276 (12%)
Query: 39 VLNTIEDVLKK--AFSSDIRIGASLIRLHFH-DCFVDGCDASILLDSTNTIDSEKFAAPN 95
V N I L++ + + I G L+RL +H D D + ++F P+
Sbjct: 19 VYNAIALKLREDDEYDNYIGYGPVLVRLAWHISGTWDKHDNTGGSYGGTYRFKKEFNDPS 78
Query: 96 NNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTA 154
N + GF+ ++ + + P +S D+ ++ +V GP GR D+
Sbjct: 79 NAGLQNGFKFLE----PIHKEFP-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDT-PE 132
Query: 155 NRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQ--FFRGRLYDF 212
+ N LP +++ F+ + +ND+ ++VAL GAH G+ + + G
Sbjct: 133 DTTPDNGRLPDADKDAGYVRTFFQRLNMNDR-EVVALKGAHALGKTHLKNSGYEGPWGAA 191
Query: 213 NNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSD 272
NN + L+ L + KL N N+ + + G +L +D
Sbjct: 192 NNVFTNEFYLN--LLNEDWKLEKNDAN----------------NEQWDSKSGYM-MLPTD 232
Query: 273 QELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRM 308
L P +IV+++ +Q+ FFK+F + ++
Sbjct: 233 YSLIQDP--KYLSIVKEYANDQDKFFKDFSKAFEKL 266
>pdb|1QPA|A Chain A, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65)
pdb|1QPA|B Chain B, Lignin Peroxidase Isozyme Lip4.65 (Pi 4.65)
Length = 345
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 120 VSCADILTIAAERSVA-LSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFR 178
V+ D + A V+ G P LGR + A +A + +P PF T+D++ +
Sbjct: 104 VTPGDFIAFAGAVGVSNCPGAPQMQFFLGRPE---ATQAAPDGLVPEPFHTIDQVLARML 160
Query: 179 NVGLNDKLDLVALSGAHTFGRA 200
+ G D+++ V L AH+ A
Sbjct: 161 DAGGFDEIETVXLLSAHSIAAA 182
>pdb|1LGA|A Chain A, Crystallographic Refinement Of Lignin Peroxidase At 2
Angstroms
pdb|1LGA|B Chain B, Crystallographic Refinement Of Lignin Peroxidase At 2
Angstroms
pdb|1LLP|A Chain A, Lignin Peroxidase (isozyme H2) Pi 4.15
Length = 343
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 103 EVIDNMKAAVERACPRVVSCADILTIAAERSVALS---GGPSWAVPLGRRDSRTANRALA 159
EV+ K V++ V+ D + A +VALS G P GR+ A +
Sbjct: 89 EVVAMQKPFVQK---HGVTPGDFIAFAG--AVALSNCPGAPQMNFFTGRK---PATQPAP 140
Query: 160 NQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHT 196
+ +P PF T+D++ + + G D+L+LV + AH+
Sbjct: 141 DGLVPEPFHTVDQIIARVNDAGEFDELELVWMLSAHS 177
>pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 111/295 (37%), Gaps = 83/295 (28%)
Query: 62 IRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVER 114
+RL FHD G D SI+ + +TI++ P N E++ K V +
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSII--AFDTIETN---FPANAGID--EIVSAQKPFVAK 94
Query: 115 ACPRVVSCADILTIAAERSVA-LSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDEL 173
+S D + A V+ GG LGR D+ A+ + +P FD++D +
Sbjct: 95 ---HNISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAAS---PDHLVPEGFDSVDSI 148
Query: 174 KSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 233
+ + G + +++V L +H+ A K DP++ T
Sbjct: 149 LARMGDAGFS-PVEVVWLLASHSIAAAD---------------KVDPSIPGT-------- 184
Query: 234 CPQGGNGGVLANFDVTTPDVFDNKYF--SNLRGR--------KG----------LLQSDQ 273
FD +TP+VFD+++F + L+GR KG LQSD
Sbjct: 185 -----------PFD-STPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDH 232
Query: 274 ELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRV 328
L P TA + NQ F +M +M L G ++C V
Sbjct: 233 LLARDP--QTACEWQSMVNNQPKIQNRFAATMSKMA----LLGQDKTKLIDCSDV 281
>pdb|1B80|A Chain A, Rec. Lignin Peroxidase H8 Oxidatively Processed
pdb|1B80|B Chain B, Rec. Lignin Peroxidase H8 Oxidatively Processed
Length = 351
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 103 EVIDNMKAAVERACPRVVSCADILTIAAERSVALS---GGPSWAVPLGRRDSRTANRALA 159
E++ K V++ V+ D + A +VALS G P GR A +
Sbjct: 96 EIVKLQKPFVQK---HGVTPGDFIAFAG--AVALSNCPGAPQMNFFTGRA---PATQPAP 147
Query: 160 NQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHT 196
+ +P PF T+D++ + + G D+L+LV + AH+
Sbjct: 148 DGLVPEPFHTVDQIINRVNDAGEFDELELVXMLSAHS 184
>pdb|2FXG|A Chain A, Crystal Structure Of Katg At Ph 4.5
pdb|2FXG|B Chain B, Crystal Structure Of Katg At Ph 4.5
pdb|2FXH|A Chain A, Crystal Structure Of Katg At Ph 6.5
pdb|2FXH|B Chain B, Crystal Structure Of Katg At Ph 6.5
pdb|3N3N|A Chain A, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3N|B Chain B, Crystal Structure Of B. Pseudomallei Katg With
Isonicotinic Acid Hydrazide Bound
pdb|3N3P|A Chain A, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
pdb|3N3P|B Chain B, Crystal Structure Of Catalase-Peroxidase Katg With
Isonicotinic Acid Hydrazide And Amp Bound
Length = 748
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT-L 222
P P +++ +F + +ND+ + ++G HTFG+ G N +P+ +
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH-----GAGPASNVGAEPEAAGI 302
Query: 223 DATFLQQLRKLCPQGGNGGVLANFDV---TTPDVFDNKYFSNLRGRKGLL 269
+A L G + + +V TTP + + +F NL G + L
Sbjct: 303 EAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWEL 352
>pdb|2DV1|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg
pdb|2DV1|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg
Length = 748
Score = 31.2 bits (69), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT-L 222
P P +++ +F + +ND+ + ++G HTFG+ G N +P+ +
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH-----GAGPASNVGAEPEAAGI 302
Query: 223 DATFLQQLRKLCPQGGNGGVLANFDV---TTPDVFDNKYFSNLRGRKGLL 269
+A L G + + +V TTP + + +F NL G + L
Sbjct: 303 EAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWEL 352
>pdb|2FXJ|A Chain A, Crystal Structure Of Katg At Ph 8.5
pdb|2FXJ|B Chain B, Crystal Structure Of Katg At Ph 8.5
pdb|3N3O|A Chain A, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
pdb|3N3O|B Chain B, Crystal Structure Of Burkholderia Pseudomallei Katg With
Nad Bound
Length = 748
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT-L 222
P P +++ +F + +ND+ + ++G HTFG+ G N +P+ +
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH-----GAGPASNVGAEPEAAGI 302
Query: 223 DATFLQQLRKLCPQGGNGGVLANFDV---TTPDVFDNKYFSNLRGRKGLL 269
+A L G + + +V TTP + + +F NL G + L
Sbjct: 303 EAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWEL 352
>pdb|3N3R|A Chain A, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
pdb|3N3R|B Chain B, Crystal Structure Of The E198a Variant Of
Catalase-Peroxidase Katg Of Burkholderia Pseudomallei
Length = 748
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT-L 222
P P +++ +F + +ND+ + ++G HTFG+ G N +P+ +
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH-----GAGPASNVGAEPEAAGI 302
Query: 223 DATFLQQLRKLCPQGGNGGVLANFDV---TTPDVFDNKYFSNLRGRKGLL 269
+A L G + + +V TTP + + +F NL G + L
Sbjct: 303 EAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWEL 352
>pdb|2DV2|A Chain A, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
pdb|2DV2|B Chain B, Crystal Structure Of D141e Mutant Of Bpkatg At Ph 8.0
Length = 748
Score = 31.2 bits (69), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT-L 222
P P +++ +F + +ND+ + ++G HTFG+ G N +P+ +
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH-----GAGPASNVGAEPEAAGI 302
Query: 223 DATFLQQLRKLCPQGGNGGVLANFDV---TTPDVFDNKYFSNLRGRKGLL 269
+A L G + + +V TTP + + +F NL G + L
Sbjct: 303 EAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWEL 352
>pdb|3N3S|A Chain A, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
pdb|3N3S|B Chain B, Crystal Structure Of The E198a Variant Of Burkholderia
Pseudomallei Catalase-Peroxidase Katg With Inh
Length = 748
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT-L 222
P P +++ +F + +ND+ + ++G HTFG+ G N +P+ +
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH-----GAGPASNVGAEPEAAGI 302
Query: 223 DATFLQQLRKLCPQGGNGGVLANFDV---TTPDVFDNKYFSNLRGRKGLL 269
+A L G + + +V TTP + + +F NL G + L
Sbjct: 303 EAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWEL 352
>pdb|1MWV|A Chain A, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|1MWV|B Chain B, Crystal Structure Of Catalase-peroxidase Katg Of
Burkholderia Pseudomallei
pdb|2B2O|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2O|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph8.0
pdb|2B2Q|A Chain A, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2Q|B Chain B, Crystal Structure Of Native Catalase-Peroxidase Katg At
Ph7.5
pdb|2B2R|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2R|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph5.6
pdb|2B2S|A Chain A, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
pdb|2B2S|B Chain B, Crystal Structure Of An Oxoferryl Species Of Catalase-
Peroxidase Katg At Ph7.5
Length = 714
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT-L 222
P P +++ +F + +ND+ + ++G HTFG+ G N +P+ +
Sbjct: 214 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH-----GAGPASNVGAEPEAAGI 268
Query: 223 DATFLQQLRKLCPQGGNGGVLANFDV---TTPDVFDNKYFSNLRGRKGLL 269
+A L G + + +V TTP + + +F NL G + L
Sbjct: 269 EAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWEL 318
>pdb|1B82|A Chain A, Pristine Recomb. Lignin Peroxidase H8
pdb|1B82|B Chain B, Pristine Recomb. Lignin Peroxidase H8
Length = 351
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 103 EVIDNMKAAVERACPRVVSCADILTIAAERSVALS---GGPSWAVPLGRRDSRTANRALA 159
E++ K V++ V+ D + A +VALS G P GR A +
Sbjct: 96 EIVKLQKPFVQK---HGVTPGDFIAFAG--AVALSNCPGAPQMNFFTGRA---PATQPAP 147
Query: 160 NQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHT 196
+ +P PF T+D++ + + G D+L+LV + AH+
Sbjct: 148 DGLVPEPFHTVDQIINRVNDAGEFDELELVWMLSAHS 184
>pdb|3N3Q|A Chain A, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
pdb|3N3Q|B Chain B, Crystal Structure Of The S324t Variant Of Burkholderia
Pseudomallei Katg With Isonicotinic Acid Hydrazide Bound
Length = 748
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT-L 222
P P +++ +F + +ND+ + ++G HTFG+ G N +P+ +
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH-----GAGPASNVGAEPEAAGI 302
Query: 223 DATFLQQLRKLCPQGGNGGVLANFDV---TTPDVFDNKYFSNLRGRKGLL 269
+A L G + +V TTP + + +F NL G + L
Sbjct: 303 EAQGLGWKSAYRTGKGADAITTGLEVTWTTTPTQWSHNFFENLFGYEWEL 352
>pdb|1X7U|A Chain A, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
pdb|1X7U|B Chain B, Crystal Structure Of The S324t Of Catalase-Peroxidase Katg
Length = 748
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 9/110 (8%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPT-L 222
P P +++ +F + +ND+ + ++G HTFG+ G N +P+ +
Sbjct: 248 PDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTH-----GAGPASNVGAEPEAAGI 302
Query: 223 DATFLQQLRKLCPQGGNGGVLANFDV---TTPDVFDNKYFSNLRGRKGLL 269
+A L G + +V TTP + + +F NL G + L
Sbjct: 303 EAQGLGWKSAYRTGKGADAITTGLEVTWTTTPTQWSHNFFENLFGYEWEL 352
>pdb|1B85|A Chain A, Lignin Peroxidase
pdb|1B85|B Chain B, Lignin Peroxidase
Length = 351
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 103 EVIDNMKAAVERACPRVVSCADILTIAAERSVALS---GGPSWAVPLGRRDSRTANRALA 159
E++ K V++ V+ D + A +VALS G P GR A +
Sbjct: 96 EIVKLQKPFVQK---HGVTPGDFIAFAG--AVALSNCPGAPQMNFFTGRA---PATQPAP 147
Query: 160 NQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHT 196
+ +P PF T+D++ + + G D+L+LV + AH+
Sbjct: 148 DGLVPEPFHTVDQIINRVNDAGEFDELELVFMLSAHS 184
>pdb|2NMB|A Chain A, Dnumb Ptb Domain Complexed With A Phosphotyrosine Peptide,
Nmr, Ensemble Of Structures
Length = 160
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 84 NTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWA 143
TI+ F AP+ N RGF I C ++C D + ER ++ + G ++A
Sbjct: 91 QTIEKVSFCAPDRNHERGFSYICRDGTTRRWMCHGFLACKD----SGER-LSHAVGCAFA 145
Query: 144 VPLGRRDSRT 153
V L R+ RT
Sbjct: 146 VCLERKQRRT 155
>pdb|3MR6|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With A Cpd
2bp Upstream Of The Active Site (Tt4)
pdb|3TQ1|A Chain A, Human Dna Polymerase Eta In Binary Complex With Dna
pdb|4EEY|A Chain A, Crystal Structure Of Human Dna Polymerase Eta In Ternary
Complex With A Cisplatin Dna Adduct
Length = 435
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 18 LEGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDAS 77
L+G P A L PS Y P T E+ ++K +G
Sbjct: 135 LQGQPISADLLPSTYIEGLPQGPTTAEETVQK----------------------EGMRKQ 172
Query: 78 ILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVER 114
L +++ + +P+ G +++ M+AA+ER
Sbjct: 173 GLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIER 209
>pdb|3MR2|A Chain A, Human Dna Polymerase Eta In Complex With Normal Dna And
Incoming Nucleotide (Nrm)
pdb|3MR3|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With The
3't Of A Cpd In The Active Site (Tt1)
pdb|3MR5|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With A Cpd
1bp Upstream Of The Active Site (Tt3)
pdb|3SI8|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex With The
5't Of A Cpd In The Active Site (Tt2)
pdb|4DL2|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite Cg
Template (Gg0a)
pdb|4DL3|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite Gg
Template (Gg0b).
pdb|4DL4|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite The
3'g Of Cisplatin Crosslinked Gs (Pt-Gg1).
pdb|4DL5|A Chain A, Human Dna Polymerase Eta Inserting Dcmpnpp Opposite The
5'g Of Cisplatin Crosslinked Gs (Pt-Gg2).
pdb|4DL6|A Chain A, Human Dna Polymerase Eta Extending Primer Immediately
After Cisplatin Crosslink (Pt-Gg3).
pdb|4DL7|A Chain A, Human Dna Polymerase Eta Fails To Extend Primer 2
Nucleotide After Cisplatin Crosslink (Pt-Gg4).
pdb|4ECQ|A Chain A, Human Dna Polymerase Eta- Dna Ternary Complex: At Crystal
At Ph6.8(K+ Mes) With 1 Ca2+ Ion
pdb|4ECR|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 40 Sec
pdb|4ECS|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 80 Sec
pdb|4ECT|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 140 Sec
pdb|4ECU|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 200 Sec
pdb|4ECV|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 230 Sec
pdb|4ECW|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 250 Sec
pdb|4ECX|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 7.0 For 300 Sec
pdb|4ECY|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 6.0 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ECZ|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 6.5 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ED0|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 6.8 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ED1|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 7.0 (Na+ Mes) With 1 Ca2+ Ion
pdb|4ED2|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 7.2 (Na+ Hepes) With 1 Ca2+ Ion
pdb|4ED3|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: At Crystal
At Ph 7.5 (Na+ Hepes) With 1 Ca2+ Ion
pdb|4ED6|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The At Crystal At Ph 6.7 For 15 Hr, Sideway
Translocation
pdb|4ED7|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Tg Crystal
At Ph 7.0 (K+ Mes) With 1 Ca2+ Ion
pdb|4ED8|A Chain A, Human Dna Polymerase Eta - Dna Ternary Complex: Reaction
In The Tg Crystal At Ph 7.0, Normal Translocation
Length = 435
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 22/97 (22%)
Query: 18 LEGSPSQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDAS 77
L+G P A L PS Y P T E+ ++K +G
Sbjct: 135 LQGQPISADLLPSTYIEGLPQGPTTAEETVQK----------------------EGMRKQ 172
Query: 78 ILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVER 114
L +++ + +P+ G +++ M+AA+ER
Sbjct: 173 GLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRAAIER 209
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2
pdb|3UT2|B Chain B, Crystal Structure Of Fungal Magkatg2
Length = 764
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201
P P + +++ +F +G+ND + ++G H FG+
Sbjct: 261 PDPAASAKDIREAFGRMGMNDTETVALIAGGHAFGKTH 298
>pdb|2CCD|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCD|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201
P P +++ +FR + +ND + G HTFG+
Sbjct: 239 PDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTH 276
>pdb|2CCA|A Chain A, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
pdb|2CCA|B Chain B, Crystal Structure Of The Catalase-Peroxidase (Katg) And
S315t Mutant From Mycobacterium Tuberculosis
Length = 740
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201
P P +++ +FR + +ND + G HTFG+
Sbjct: 239 PDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTH 276
>pdb|1SJ2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
pdb|1SJ2|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis
Catalase-Peroxidase
Length = 743
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201
P P +++ +FR + +ND + G HTFG+
Sbjct: 242 PDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTH 279
>pdb|3VLK|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLK|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLL|A Chain A, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
pdb|3VLL|B Chain B, Crystal Structure Analysis Of The Ser305ala Variant Of
Katg From Haloarcula Marismortui Complexes With
Inhibitor Sha
Length = 737
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201
P P + ++ +F + +NDK ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|1ITK|A Chain A, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
pdb|1ITK|B Chain B, Crystal Structure Of Catalase-peroxidase From Haloarcula
Marismortui
Length = 731
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201
P P + ++ +F + +NDK ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|3VLH|A Chain A, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLH|B Chain B, Crystal Structure Analysis Of The Arg409leu Variants Of
Katg From Haloarcula Marismortui
pdb|3VLI|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLI|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Katg From Haloarcula Marismortui
pdb|3VLJ|A Chain A, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
pdb|3VLJ|B Chain B, Crystal Structure Analysis Of The Cyanide Arg409leu
Variant Complexes With O-Dianisidine In Katg From
Haloarcula Marismortui
Length = 737
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201
P P + ++ +F + +NDK ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|3UW8|A Chain A, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
pdb|3UW8|B Chain B, Crystal Structure Analysis Of The Ser305thr Variants Of
Katg From Haloarcula Marismortui
Length = 737
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201
P P + ++ +F + +NDK ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVH 265
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 265 RKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKN---FVTSMIRMG 309
R G L TPG+D A ++E G N +AF K F +S I G
Sbjct: 77 RSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGG 124
>pdb|3VLM|A Chain A, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
pdb|3VLM|B Chain B, Crystal Structure Analysis Of The Met244ala Variant Of
Katg From Haloarcula Marismortui
Length = 737
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201
P P + ++ +F +NDK ++G HTFG+
Sbjct: 228 PDPEASAKNIRQTFDRAAMNDKETAALIAGGHTFGKVH 265
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 20 GSPSQAQLSP-----SFYSSTCPNVLNTIEDVLKKAFS-SDIRIGASLIRLHFHDCFVDG 73
GS S QL P F S T VLNT + L K FS ++ + ASL + H C D
Sbjct: 155 GSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDE 214
Query: 74 CDASILLDSTNTI 86
++ D I
Sbjct: 215 VYQWMVYDGHQHI 227
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 20 GSPSQAQLSP-----SFYSSTCPNVLNTIEDVLKKAFS-SDIRIGASLIRLHFHDCFVDG 73
GS S QL P F S T VLNT + L K FS ++ + ASL + H C D
Sbjct: 155 GSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDE 214
Query: 74 CDASILLDSTNTI 86
++ D I
Sbjct: 215 VYQWMVYDGHQHI 227
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 20 GSPSQAQLSP-----SFYSSTCPNVLNTIEDVLKKAFS-SDIRIGASLIRLHFHDCFVDG 73
GS S QL P F S T VLNT + L K FS ++ + ASL + H C D
Sbjct: 155 GSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDE 214
Query: 74 CDASILLDSTNTI 86
++ D I
Sbjct: 215 VYQWMVYDGHQHI 227
>pdb|1UB2|A Chain A, Crystal Structure Of Catalase-Peroxidase From
Synechococcus Pcc 7942
Length = 720
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 164 PGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGR 199
P P T +++ +F + +ND+ + +G HT G+
Sbjct: 231 PDPLKTAHDVRVTFARMAMNDEETVALTAGGHTVGK 266
>pdb|2EWS|A Chain A, Crystal Structure Of S.Aureus Pantothenate Kinase
pdb|2EWS|B Chain B, Crystal Structure Of S.Aureus Pantothenate Kinase
Length = 287
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 228 QQLRKLCPQGGNGGVLA 244
QQ+ KLC GGN GV+A
Sbjct: 62 QQIEKLCLTGGNAGVIA 78
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,030,957
Number of Sequences: 62578
Number of extensions: 421570
Number of successful extensions: 851
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 731
Number of HSP's gapped (non-prelim): 101
length of query: 349
length of database: 14,973,337
effective HSP length: 100
effective length of query: 249
effective length of database: 8,715,537
effective search space: 2170168713
effective search space used: 2170168713
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)