Query 018871
Match_columns 349
No_of_seqs 174 out of 1498
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 04:44:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018871.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018871hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 6E-106 1E-110 776.5 24.8 299 23-329 21-324 (324)
2 cd00693 secretory_peroxidase H 100.0 1.5E-99 3E-104 729.6 24.7 298 26-328 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 2.6E-71 5.5E-76 516.9 12.0 229 43-293 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1.9E-68 4.1E-73 508.9 21.7 233 40-326 14-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.8E-65 3.8E-70 483.0 20.4 231 38-315 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 3.4E-64 7.4E-69 472.9 21.3 230 30-313 4-247 (250)
7 cd00692 ligninase Ligninase an 100.0 2.2E-62 4.8E-67 474.8 21.8 240 39-333 16-291 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 4.6E-62 9.9E-67 457.9 21.5 221 40-314 17-248 (251)
9 cd00314 plant_peroxidase_like 100.0 2.5E-58 5.4E-63 435.0 18.5 224 42-310 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 6E-55 1.3E-59 429.5 18.3 260 40-319 44-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 8.2E-52 1.8E-56 430.3 19.8 256 40-315 54-404 (716)
12 PRK15061 catalase/hydroperoxid 100.0 1.5E-48 3.2E-53 403.9 19.6 257 40-316 56-411 (726)
13 cd08201 plant_peroxidase_like_ 100.0 6.5E-49 1.4E-53 368.9 12.0 232 27-310 14-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 8.1E-39 1.8E-43 304.1 17.7 221 45-312 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 8.1E-34 1.8E-38 296.0 17.3 220 42-312 429-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 2.9E-33 6.3E-38 290.4 18.6 220 45-312 442-721 (726)
17 COG0376 KatG Catalase (peroxid 99.9 7.8E-27 1.7E-31 233.0 15.2 254 41-313 70-417 (730)
18 COG0376 KatG Catalase (peroxid 99.6 7.8E-14 1.7E-18 140.5 15.6 217 45-312 452-725 (730)
19 PF07172 GRP: Glycine rich pro 58.2 7.6 0.00016 31.7 2.1 21 1-21 1-21 (95)
20 PF11895 DUF3415: Domain of un 43.1 21 0.00046 28.3 2.4 31 297-331 3-33 (80)
21 PTZ00411 transaldolase-like pr 24.8 49 0.0011 33.0 2.1 49 137-185 180-231 (333)
22 KOG0400 40S ribosomal protein 20.3 60 0.0013 28.2 1.5 33 168-201 31-64 (151)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=5.6e-106 Score=776.46 Aligned_cols=299 Identities=46% Similarity=0.814 Sum_probs=283.4
Q ss_pred CcCCCCcccccCCChhHHHHHHHHHHHHHhhCcchhhHHHHHHhhhccCCCCCcceecCCCCCCccccccCCCCCchhhH
Q 018871 23 SQAQLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGF 102 (349)
Q Consensus 23 ~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSiLl~~~~~~~~Ek~~~~N~~~~rg~ 102 (349)
+.++|+++||++|||++|+||++.|++++.++|+++|++|||+||||||+||||||||+++ ..||++++|. ++|||
T Consensus 21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~-~l~Gf 96 (324)
T PLN03030 21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNL-LLRGY 96 (324)
T ss_pred hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCc-CcchH
Confidence 4567999999999999999999999999999999999999999999999999999999864 4699999998 78999
Q ss_pred HHHHHHHHHHHhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhhhcccCCCCCCCCHHHHHHHHHhcCC
Q 018871 103 EVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGL 182 (349)
Q Consensus 103 ~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 182 (349)
++|+.||++||+.||++|||||||+|||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999998777664 899999999999999999999
Q ss_pred CCcccceeeccccccccccccccccccccCCCCC-CCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchHHHHH
Q 018871 183 NDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTG-KPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSN 261 (349)
Q Consensus 183 ~~~~dlVaLsGaHTiG~ahc~~f~~Rl~~f~g~~-~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~n 261 (349)
+.+ |||+||||||||++||.+|.+|||||.|++ .+||+|||.|++.|++.||..++....+++|+.||.+|||+||+|
T Consensus 176 ~~~-DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~n 254 (324)
T PLN03030 176 NTQ-DLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSN 254 (324)
T ss_pred CHH-HheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHH
Confidence 999 999999999999999999999999999875 589999999999999999964333346789999999999999999
Q ss_pred hhcCccccccchhhcCCChhhHHHHHHHhhcCH----HHHHHHHHHHHHHhhcCCCCCCCcCcccccccccc
Q 018871 262 LRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQ----NAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVN 329 (349)
Q Consensus 262 l~~~~glL~SD~~L~~d~~~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgvltG~~GeIR~~C~~~n 329 (349)
|+.++|+|+|||+|+.|+ +|+++|++||.|+ +.|+++|++||+|||+|+||||++||||++|+++|
T Consensus 255 ll~~rGlL~SDq~L~~d~--~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 255 LKNGRGILESDQKLWTDA--STRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHhcCCCcCCchHhhcCc--cHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 999999999999999999 9999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.5e-99 Score=729.61 Aligned_cols=298 Identities=56% Similarity=0.955 Sum_probs=287.2
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHhhCcchhhHHHHHHhhhccCCCCCcceecCCCCCCccccccCCCCCchhhHHHH
Q 018871 26 QLSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVI 105 (349)
Q Consensus 26 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSiLl~~~~~~~~Ek~~~~N~~~~rg~~~I 105 (349)
||+++||+++||++|+||++.|++.+.++++++|++|||+||||||+||||||||+.+.+..+|+++++|. +++||++|
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~-~l~g~~~i 79 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNL-SLRGFDVI 79 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCC-CcchhHHH
Confidence 59999999999999999999999999999999999999999999999999999999887778999999999 57999999
Q ss_pred HHHHHHHHhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhhhcccCCCCCCCCHHHHHHHHHhcCCCCc
Q 018871 106 DNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDK 185 (349)
Q Consensus 106 ~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~ 185 (349)
+.||+++|+.||++|||||||+||||+||+.+|||.|+|++||+|++++.+..+ +.||.|+.+++++++.|+++||+++
T Consensus 80 ~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~ 158 (298)
T cd00693 80 DDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVT 158 (298)
T ss_pred HHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999999999999999999999999998876655 7899999999999999999999999
Q ss_pred ccceeeccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchHHHHHhhcC
Q 018871 186 LDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR 265 (349)
Q Consensus 186 ~dlVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~nl~~~ 265 (349)
|||||+||||||++||.+|.+|||||+|++.+||+||+.|+..|+..||...++...+++|+.||.+|||+||+||+.+
T Consensus 159 -d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~ 237 (298)
T cd00693 159 -DLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237 (298)
T ss_pred -HheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999765556678999999999999999999999
Q ss_pred ccccccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCCCCcCccccccccc
Q 018871 266 KGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRV 328 (349)
Q Consensus 266 ~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgvltG~~GeIR~~C~~~ 328 (349)
+|+|+|||+|+.|+ +|+++|++||.||+.|+++|++||+||++++|+||.+||||++|+++
T Consensus 238 ~glL~SD~~L~~d~--~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 238 RGLLTSDQALLSDP--RTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCccCCHHhccCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999 99999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=2.6e-71 Score=516.88 Aligned_cols=229 Identities=50% Similarity=0.873 Sum_probs=209.9
Q ss_pred HHHHHHHHHhhCcchhhHHHHHHhhhccC-CCCCcceecCCCCCCccccccCCCCCchhhHHHHHHHHHHHHhhCCCCCC
Q 018871 43 IEDVLKKAFSSDIRIGASLIRLHFHDCFV-DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVS 121 (349)
Q Consensus 43 Vr~~v~~~~~~~~~~aa~llRL~FHDcfv-~GcDgSiLl~~~~~~~~Ek~~~~N~~~~rg~~~I~~iK~~le~~cp~~VS 121 (349)
||+.|++++.++++++|++|||+|||||+ +|||||||+. .+|+++++|.++.+++++|+.||+++|+.||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 89999999999999999999999999999 9999999983 57999999997656999999999999999999999
Q ss_pred HHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhhhcccCCCCCCCCHHHHHHHHHhcCCCCcccceeecccccccccc
Q 018871 122 CADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQ 201 (349)
Q Consensus 122 cADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLsGaHTiG~ah 201 (349)
|||||+||+|+||+.+|||.|+|++||+|++++...++ .+||.|+.++++|++.|+++||+++ |||||+||||||++|
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~-e~VaLsGaHTiG~~~ 153 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAE-EMVALSGAHTIGRAH 153 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HH-HHHHHHGGGGSTEES
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchh-hhcceecccccccce
Confidence 99999999999999999999999999999999998777 7899999999999999999999999 999999999999999
Q ss_pred ccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchHHHHHhhcCccccccchhhcCCChh
Q 018871 202 CQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA 281 (349)
Q Consensus 202 c~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~nl~~~~glL~SD~~L~~d~~~ 281 (349)
|.+|. ||| + .+||+||+.|+.. .| ..++++ .+++| ||.+|||+||+++++++|+|+||++|+.|+
T Consensus 154 c~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~-- 218 (230)
T PF00141_consen 154 CSSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDP-- 218 (230)
T ss_dssp GGCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHST--
T ss_pred ecccc-ccc-c----cccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCH--
Confidence 99999 999 5 5799999999988 99 433333 77899 999999999999999999999999999999
Q ss_pred hHHHHHHHhhcC
Q 018871 282 DTAAIVEDFGRN 293 (349)
Q Consensus 282 ~t~~~V~~yA~d 293 (349)
+|+++|++||+|
T Consensus 219 ~t~~~V~~yA~d 230 (230)
T PF00141_consen 219 ETRPIVERYAQD 230 (230)
T ss_dssp THHHHHHHHHHT
T ss_pred HHHHHHHHHhcC
Confidence 999999999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.9e-68 Score=508.93 Aligned_cols=233 Identities=29% Similarity=0.484 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHHhhCcchhhHHHHHHhhhcc-------CCCCCcceecCCCCCCccccccCCCCCchhhHHHHHHHHHHH
Q 018871 40 LNTIEDVLKKAFSSDIRIGASLIRLHFHDCF-------VDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAV 112 (349)
Q Consensus 40 e~iVr~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSiLl~~~~~~~~Ek~~~~N~~~~rg~~~I~~iK~~l 112 (349)
-+.+|+++ ..+.++|.++|.+|||+||||| ++||||||++ .+|+++++|.++.+||++|+.||+++
T Consensus 14 ~~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll------~~E~~~~~N~gL~~g~~vid~iK~~~ 86 (289)
T PLN02608 14 IEKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRN------EEEYSHGANNGLKIAIDLCEPVKAKH 86 (289)
T ss_pred HHHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeec------ccccCCccccchHHHHHHHHHHHHHc
Confidence 34566666 4477899999999999999999 8999999998 36999999996657999999999987
Q ss_pred HhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhhhcccCCCCCCCCHHHHHHHHHhcCCCCcccceeec
Q 018871 113 ERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS 192 (349)
Q Consensus 113 e~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLs 192 (349)
++|||||||+||||+||+.+|||.|+|++||+|++++. ++++||+|+.+++++++.|+++||+++ |||||+
T Consensus 87 -----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~LP~p~~~~~~l~~~F~~~Gl~~~-D~VaLs 157 (289)
T PLN02608 87 -----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACP---EEGRLPDAKKGAKHLRDVFYRMGLSDK-DIVALS 157 (289)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCC---ccCCCcCCCCCHHHHHHHHHHcCCCHH-HHhhhc
Confidence 48999999999999999999999999999999999986 446899999999999999999999999 999999
Q ss_pred cccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchHHHHHhhcC--ccc--
Q 018871 193 GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR--KGL-- 268 (349)
Q Consensus 193 GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~nl~~~--~gl-- 268 (349)
||||||++||. |+ +|.| | ++ .||.+|||+||++++.+ +|+
T Consensus 158 GAHTiG~ahc~----r~-g~~g-----~-------------------------~~-~Tp~~FDN~Yy~~ll~~~~~gll~ 201 (289)
T PLN02608 158 GGHTLGRAHPE----RS-GFDG-----P-------------------------WT-KEPLKFDNSYFVELLKGESEGLLK 201 (289)
T ss_pred ccccccccccc----CC-CCCC-----C-------------------------CC-CCCCccChHHHHHHHcCCcCCccc
Confidence 99999999994 55 4422 0 12 58999999999999999 798
Q ss_pred cccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCCCCcCccccccc
Q 018871 269 LQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIRLNCR 326 (349)
Q Consensus 269 L~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgvltG~~GeIR~~C~ 326 (349)
|+|||+|+.|+ +|+++|+.||.|++.|+++|+.||+||++++|+||++||+.+.-+
T Consensus 202 L~SD~~L~~d~--~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 202 LPTDKALLEDP--EFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred cccCHhhhcCh--hHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 79999999999 999999999999999999999999999999999999999998654
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.8e-65 Score=483.03 Aligned_cols=231 Identities=26% Similarity=0.421 Sum_probs=208.7
Q ss_pred hHHHHHHHHHHHHHhhCcchhhHHHHHHhhhccCCCCCcceecCCC---CCCccccccCCCCCchhhHHHHHHHHHHHHh
Q 018871 38 NVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDST---NTIDSEKFAAPNNNSARGFEVIDNMKAAVER 114 (349)
Q Consensus 38 ~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSiLl~~~---~~~~~Ek~~~~N~~~~rg~~~I~~iK~~le~ 114 (349)
..++||++.|++.+. +++++|++|||+|||||+ ||+|++++.. ..+.+|+++++|.++.+||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 458899999999999 999999999999999994 8777777432 23357999999997669999999999987
Q ss_pred hCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhhhcccCCCCCCCCHHHHHHHHHhcCCCCcccceeeccc
Q 018871 115 ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGA 194 (349)
Q Consensus 115 ~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLsGa 194 (349)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++||+++ |||||+||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~-d~VaLsGa 161 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQ-EIVALSGA 161 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHH-HHHHhccc
Confidence 4 8999999999999999999999999999999999998777777899999999999999999999999 99999999
Q ss_pred cccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchHHHHHhhcCcc-------
Q 018871 195 HTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKG------- 267 (349)
Q Consensus 195 HTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~nl~~~~g------- 267 (349)
||||++||.. ++|.|. +..||.+|||+||+||+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~-------------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP-------------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCCC-------------------------------CCCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999953 243221 014899999999999999999
Q ss_pred -ccccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCC
Q 018871 268 -LLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLT 315 (349)
Q Consensus 268 -lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgvlt 315 (349)
+|+||++|+.|+ +|+++|+.||.|++.|+++|++||+||+++||..
T Consensus 206 ~~L~sD~~L~~d~--~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 206 LMLPTDKALLEDP--KFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred eechhhHHHHcCc--cHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999 9999999999999999999999999999999853
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=3.4e-64 Score=472.90 Aligned_cols=230 Identities=28% Similarity=0.532 Sum_probs=207.5
Q ss_pred cccc--CCChhHHHHHHHHHHHHHhhCcchhhHHHHHHhh-----hccCC--CCCcceecCCCCCCccccccCCCCCchh
Q 018871 30 SFYS--STCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFH-----DCFVD--GCDASILLDSTNTIDSEKFAAPNNNSAR 100 (349)
Q Consensus 30 ~fY~--~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FH-----Dcfv~--GcDgSiLl~~~~~~~~Ek~~~~N~~~~r 100 (349)
+||. +-|+.+++.|+..+++.+ .+++++|.+|||+|| ||+++ ||||||.+ .+|+++++|.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 5665 448899999999999988 788999999999999 88876 99999954 46999999997669
Q ss_pred hHHHHHHHHHHHHhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhhhcccCCCCCCCCHHHHHHHHHh-
Q 018871 101 GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRN- 179 (349)
Q Consensus 101 g~~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~- 179 (349)
||++|+.||+++ ++|||||||+||||+||+.+|||.|+|++||+|++++. +.+.||.|+.++++|++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPP---PEGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCccccc---ccCCCCCCCcCHHHHHHHHHHh
Confidence 999999999998 58999999999999999999999999999999999986 346799999999999999997
Q ss_pred cCCCCcccceeeccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchHHH
Q 018871 180 VGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYF 259 (349)
Q Consensus 180 ~Gl~~~~dlVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy 259 (349)
+||+++ |||||+||||||++|| +|+ +|.|. ++ .||.+|||+||
T Consensus 149 ~Gl~~~-d~VaLsGaHTiG~~hc----~r~-~~~g~------------------------------~~-~tp~~fDn~Yy 191 (250)
T PLN02364 149 MGLSDK-DIVALSGAHTLGRCHK----DRS-GFEGA------------------------------WT-SNPLIFDNSYF 191 (250)
T ss_pred cCCCHH-HheeeecceeeccccC----CCC-CCCCC------------------------------CC-CCCCccchHHH
Confidence 599999 9999999999999999 444 43221 12 58999999999
Q ss_pred HHhhcC--ccccc--cchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCC
Q 018871 260 SNLRGR--KGLLQ--SDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKP 313 (349)
Q Consensus 260 ~nl~~~--~glL~--SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv 313 (349)
++|+.+ +|+|. |||+|+.|+ +|+.+|+.||.|++.|+++|++||+||++||+
T Consensus 192 ~~ll~~~~~gll~l~sD~~L~~d~--~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~ 247 (250)
T PLN02364 192 KELLSGEKEGLLQLVSDKALLDDP--VFRPLVEKYAADEDAFFADYAEAHMKLSELGF 247 (250)
T ss_pred HHHhcCCcCCCccccchHHHccCc--hHHHHHHHHhhCHHHHHHHHHHHHHHHHccCC
Confidence 999999 89875 999999999 99999999999999999999999999999997
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.2e-62 Score=474.84 Aligned_cols=240 Identities=28% Similarity=0.403 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHhhCc---chhhHHHHHHhhhccC------------CCCCcceecCCCCCCccccccCCCCCchhhHH
Q 018871 39 VLNTIEDVLKKAFSSDI---RIGASLIRLHFHDCFV------------DGCDASILLDSTNTIDSEKFAAPNNNSARGFE 103 (349)
Q Consensus 39 ~e~iVr~~v~~~~~~~~---~~aa~llRL~FHDcfv------------~GcDgSiLl~~~~~~~~Ek~~~~N~~~~rg~~ 103 (349)
+|..|+++|++.+..+. ..|+.+|||+||||++ +|||||||++.+ .|+++++|.+ ++ +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~g-L~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIG-LD--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCC-HH--H
Confidence 58899999999998554 4677899999999996 899999999753 6999999985 45 8
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHhhhhHhhh-cCCCCccccCCCCCCcchhhhhcccCCCCCCCCHHHHHHHHHhcCC
Q 018871 104 VIDNMKAAVERACPRVVSCADILTIAAERSVAL-SGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGL 182 (349)
Q Consensus 104 ~I~~iK~~le~~cp~~VScADilalAar~aV~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 182 (349)
+|+.||..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++. +++.||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~---~~g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPA---PDGLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 99999999999999995 5999999999999999886 456799999999999999999999
Q ss_pred CCcccceeeccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchHHHHHh
Q 018871 183 NDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNL 262 (349)
Q Consensus 183 ~~~~dlVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~nl 262 (349)
+++ |||+|+||||||++|. +||+++ ..++| .||.+|||+||+|+
T Consensus 163 ~~~-E~VaLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~l 206 (328)
T cd00692 163 SPD-ELVALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFFIET 206 (328)
T ss_pred CHH-HHhhhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHHHHH
Confidence 999 9999999999999982 367664 14588 59999999999998
Q ss_pred h-cCcc-------------------ccccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCCCCCcCccc
Q 018871 263 R-GRKG-------------------LLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPLTGNQGEIR 322 (349)
Q Consensus 263 ~-~~~g-------------------lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgvltG~~GeIR 322 (349)
+ .+++ +|+||++|+.|+ +|+.+|++||.||++|+++|+.||+||++|||. ...+
T Consensus 207 l~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~--~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l 280 (328)
T cd00692 207 LLKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDP--RTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISL 280 (328)
T ss_pred HHcCCCCCCccccccccccCccccccccchHHHhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchh
Confidence 7 5555 499999999999 999999999999999999999999999999985 4488
Q ss_pred cccccccCCCc
Q 018871 323 LNCRRVNGNSN 333 (349)
Q Consensus 323 ~~C~~~n~~~~ 333 (349)
.+|+.|++...
T Consensus 281 ~dcs~v~p~~~ 291 (328)
T cd00692 281 TDCSDVIPPPK 291 (328)
T ss_pred ccCcccCCCCC
Confidence 89999997753
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=4.6e-62 Score=457.93 Aligned_cols=221 Identities=28% Similarity=0.497 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHHhhCcchhhHHHHHHhhhccC-------CCCCcceecCCCCCCccccccCCCCCchhhHHHHHHHHHHH
Q 018871 40 LNTIEDVLKKAFSSDIRIGASLIRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAV 112 (349)
Q Consensus 40 e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgSiLl~~~~~~~~Ek~~~~N~~~~rg~~~I~~iK~~l 112 (349)
.+-++..+.+.+ ++...+|.+|||+||||.+ |||||||++ ..|+++++|.++..++++|+.||+++
T Consensus 17 ~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf------~~E~~~~~N~gL~~~~~~i~~iK~~~ 89 (251)
T PLN02879 17 VQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRH------PQELAHDANNGLDIAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecC------hhhccCCCcCChHHHHHHHHHHHHHc
Confidence 345677788876 4579999999999999964 899999976 36999999997766999999999998
Q ss_pred HhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhhhcccCCCCCCCCHHHHHHHHHhcCCCCcccceeec
Q 018871 113 ERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS 192 (349)
Q Consensus 113 e~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLs 192 (349)
++|||||||+||+|+||+.+|||.|+|++||+|+..+. ++++||.|+.++++|++.|+++||+++ ||||||
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~---~~~~lP~p~~~~~~l~~~F~~~Gl~~~-dlVALs 160 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPP---PEGRLPQATKGVDHLRDVFGRMGLNDK-DIVALS 160 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCCCHH-HHeeee
Confidence 58999999999999999999999999999999999875 456899999999999999999999999 999999
Q ss_pred cccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchHHHHHhhcC--ccc--
Q 018871 193 GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGR--KGL-- 268 (349)
Q Consensus 193 GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~nl~~~--~gl-- 268 (349)
||||||++||. | ++|.|. +| .||.+|||+||++|+.+ +|+
T Consensus 161 GaHTiG~ah~~----r-~g~~g~------------------------------~d-~tp~~FDN~Yy~~ll~~~~~gll~ 204 (251)
T PLN02879 161 GGHTLGRCHKE----R-SGFEGA------------------------------WT-PNPLIFDNSYFKEILSGEKEGLLQ 204 (251)
T ss_pred ccccccccccc----c-ccCCCC------------------------------CC-CCccceeHHHHHHHHcCCcCCCcc
Confidence 99999999995 3 444321 23 58999999999999999 898
Q ss_pred cccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCCC
Q 018871 269 LQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKPL 314 (349)
Q Consensus 269 L~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgvl 314 (349)
|+||++|+.|+ +|+++|++||.||++|+++|++||+||++||+.
T Consensus 205 L~SD~aL~~D~--~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 205 LPTDKALLDDP--LFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred chhhHHHhcCC--cHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 67999999999 999999999999999999999999999999974
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=2.5e-58 Score=434.98 Aligned_cols=224 Identities=33% Similarity=0.515 Sum_probs=206.5
Q ss_pred HHHHHHHHHHhhCcchhhHHHHHHhhhccCC--------CCCcceecCCCCCCccccccCCCCCchhhHHHHHHHHHHHH
Q 018871 42 TIEDVLKKAFSSDIRIGASLIRLHFHDCFVD--------GCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVE 113 (349)
Q Consensus 42 iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~--------GcDgSiLl~~~~~~~~Ek~~~~N~~~~rg~~~I~~iK~~le 113 (349)
.|++.|++.+.+++.+++++|||+||||++. ||||||+++. |+++++|.++.+++++|+.||.++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~------e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP------ELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc------cccCcccccHHHHHHHHHHHHHHcC
Confidence 5889999999999999999999999999986 9999999963 9999999987899999999999999
Q ss_pred hhCCCCCCHHHHHHHhhhhHhhhc--CCCCccccCCCCCCcchh--hhhcccCCCCCCCCHHHHHHHHHhcCCCCcccce
Q 018871 114 RACPRVVSCADILTIAAERSVALS--GGPSWAVPLGRRDSRTAN--RALANQNLPGPFDTLDELKSSFRNVGLNDKLDLV 189 (349)
Q Consensus 114 ~~cp~~VScADilalAar~aV~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlV 189 (349)
. |++|||||||++|+++||+.+ |||.|+|++||+|++.+. ...+...+|.|..+++++++.|.++||+++ |||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~-e~V 152 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPS-ELV 152 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHH-HHH
Confidence 8 899999999999999999999 999999999999999774 233556788888899999999999999999 999
Q ss_pred eec-ccccc-ccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchHHHHHhhcCc-
Q 018871 190 ALS-GAHTF-GRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRK- 266 (349)
Q Consensus 190 aLs-GaHTi-G~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~Yy~nl~~~~- 266 (349)
||+ ||||| |++||..|..|+ |+ +|..||.+|||+||++++.++
T Consensus 153 AL~~GaHti~G~~~~~~~~~~~------------------------~~----------~~~~tp~~fDN~yy~~l~~~~~ 198 (255)
T cd00314 153 ALSAGAHTLGGKNHGDLLNYEG------------------------SG----------LWTSTPFTFDNAYFKNLLDMNW 198 (255)
T ss_pred hhccCCeeccCcccCCCCCccc------------------------CC----------CCCCCCCccchHHHHHHhcCCc
Confidence 999 99999 999998877654 21 344799999999999999988
Q ss_pred ---------------cccccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhc
Q 018871 267 ---------------GLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGN 310 (349)
Q Consensus 267 ---------------glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 310 (349)
++|+||++|+.|+ +|+.+|+.||.|++.|+++|++||+||++
T Consensus 199 ~~~~~~~~~~~~~~~~~l~sD~~L~~d~--~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 199 EWRVGSPDPDGVKGPGLLPSDYALLSDS--ETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred ccccCCccCCCcccCCCchhhHHHhcCH--hHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 8999999999999 99999999999999999999999999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=6e-55 Score=429.52 Aligned_cols=260 Identities=22% Similarity=0.354 Sum_probs=229.5
Q ss_pred HHHHHHHHHHHHhhC--------cchhhHHHHHHhhhccC-------CCCC-cceecCCCCCCccccccCCCCCchhhHH
Q 018871 40 LNTIEDVLKKAFSSD--------IRIGASLIRLHFHDCFV-------DGCD-ASILLDSTNTIDSEKFAAPNNNSARGFE 103 (349)
Q Consensus 40 e~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSiLl~~~~~~~~Ek~~~~N~~~~rg~~ 103 (349)
.+.|+++|++.+... ...+|.+|||+|||+.+ ||++ |+|.+ .+|++++.|.++.+++.
T Consensus 44 ~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf------~pe~~~~~N~gL~~a~~ 117 (409)
T cd00649 44 LEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRF------APLNSWPDNVNLDKARR 117 (409)
T ss_pred HHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCcccc------ccccCcHhhhhHHHHHH
Confidence 378999999999865 37999999999999985 8997 78877 46999999999889999
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhh--------------------------
Q 018871 104 VIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRA-------------------------- 157 (349)
Q Consensus 104 ~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 157 (349)
+++.||+++ |..||+||+|+||+..||+.+|||.|++.+||.|...+...
T Consensus 118 ~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~ 193 (409)
T cd00649 118 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLA 193 (409)
T ss_pred HHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchh
Confidence 999999988 34799999999999999999999999999999999754320
Q ss_pred ---------hccc--CCCCCCCCHHHHHHHHHhcCCCCcccceee-ccccccccccccccccccccCCCCCCCCCCCCHH
Q 018871 158 ---------LANQ--NLPGPFDTLDELKSSFRNVGLNDKLDLVAL-SGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDAT 225 (349)
Q Consensus 158 ---------~~~~--~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaL-sGaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~ 225 (349)
.+++ .||+|..++.+|++.|.+|||+++ ||||| +||||||++||..|.+||. +||.+++.
T Consensus 194 a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~-E~VAL~sGAHTiGkaHc~~~~~rlg-------~dP~~~~~ 265 (409)
T cd00649 194 AVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASHVG-------PEPEAAPI 265 (409)
T ss_pred hhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHH-HHeeeccCCcceeecCcccccccCC-------CCCCcCHH
Confidence 0223 699999999999999999999999 99999 5999999999999999983 59999999
Q ss_pred HHHHHH--hcCCCCCC-CCcccccC---CCCCcccchHHHHHhhc-----------------------------------
Q 018871 226 FLQQLR--KLCPQGGN-GGVLANFD---VTTPDVFDNKYFSNLRG----------------------------------- 264 (349)
Q Consensus 226 ~~~~L~--~~Cp~~~~-~~~~~~~D---~~tp~~FDn~Yy~nl~~----------------------------------- 264 (349)
|++.|. ..||...+ +.....+| +.||.+|||+||++|+.
T Consensus 266 ~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~ 345 (409)
T cd00649 266 EQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKK 345 (409)
T ss_pred HHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccc
Confidence 999996 89997433 23355788 47999999999999998
Q ss_pred -CccccccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHh--hcCCCCCCCcC
Q 018871 265 -RKGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRM--GNLKPLTGNQG 319 (349)
Q Consensus 265 -~~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgvltG~~G 319 (349)
++++|+||++|+.|+ +|+++|++||.|+++||++|++||.|| +.+|+++-..|
T Consensus 346 ~~~gmL~SD~aL~~Dp--~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 346 HAPMMLTTDLALRFDP--EYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cCcccchhhHhhhcCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 568999999999999 999999999999999999999999999 68999885544
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=8.2e-52 Score=430.29 Aligned_cols=256 Identities=23% Similarity=0.325 Sum_probs=223.3
Q ss_pred HHHHHHHHHHHHhhCc--------chhhHHHHHHhhhccC-------CCCC-cceecCCCCCCccccccCCCCCchhhHH
Q 018871 40 LNTIEDVLKKAFSSDI--------RIGASLIRLHFHDCFV-------DGCD-ASILLDSTNTIDSEKFAAPNNNSARGFE 103 (349)
Q Consensus 40 e~iVr~~v~~~~~~~~--------~~aa~llRL~FHDcfv-------~GcD-gSiLl~~~~~~~~Ek~~~~N~~~~rg~~ 103 (349)
.+.|+++|++.+.... ..+|-+|||+||++.+ |||+ |+|.+ .+|++++.|.++.+++.
T Consensus 54 ~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf------~P~~sw~~N~~Ldka~~ 127 (716)
T TIGR00198 54 LAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRF------APLNSWPDNVNLDKARR 127 (716)
T ss_pred HHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceec------ccccCchhhhhHHHHHH
Confidence 3579999999998753 6899999999999985 7885 77876 57999999998888999
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhh--------------------------h
Q 018871 104 VIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANR--------------------------A 157 (349)
Q Consensus 104 ~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~--------------------------~ 157 (349)
+++.||+ .||++|||||||+||+++||+.+|||.|+|.+||+|+..+.. .
T Consensus 128 lL~pIk~----kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~ 203 (716)
T TIGR00198 128 LLWPIKK----KYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAA 203 (716)
T ss_pred HHHHHHH----HCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchh
Confidence 9999988 478999999999999999999999999999999999943210 0
Q ss_pred ----------hcccCCCCCCCCHHHHHHHHHhcCCCCcccceeec-cccccccccccccccccccCCCCCCCCCCCCHHH
Q 018871 158 ----------LANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS-GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATF 226 (349)
Q Consensus 158 ----------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~ 226 (349)
+....+|+|..++.+|++.|.+||||++ |||||+ ||||||++||.+|.+|| .+||+++|.|
T Consensus 204 ~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~-EmVALiaGaHTiGkaHc~s~~~rl-------g~dP~~~~~~ 275 (716)
T TIGR00198 204 TEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDE-ETVALIAGGHTVGKCHGAGPAELI-------GPDPEGAPIE 275 (716)
T ss_pred hhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChH-HHeeeecCceeccccCCCcccccC-------CCCCCcCHHH
Confidence 1122699999999999999999999999 999995 99999999999999998 2799999999
Q ss_pred HHHHHhcCCCCC---CCCcccccC---CCCCcccchHHHHHhhcC----------------------------------c
Q 018871 227 LQQLRKLCPQGG---NGGVLANFD---VTTPDVFDNKYFSNLRGR----------------------------------K 266 (349)
Q Consensus 227 ~~~L~~~Cp~~~---~~~~~~~~D---~~tp~~FDn~Yy~nl~~~----------------------------------~ 266 (349)
++.|+.+||... .+...+.+| +.||.+|||+||+||+.. +
T Consensus 276 ~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~ 355 (716)
T TIGR00198 276 EQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNP 355 (716)
T ss_pred HHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeeccccccccccccccccccc
Confidence 999999998532 222346777 579999999999999974 6
Q ss_pred cccccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhh--cCCCCC
Q 018871 267 GLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMG--NLKPLT 315 (349)
Q Consensus 267 glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgvlt 315 (349)
++|+||++|..|+ +|+++|++||.|++.|+++|++||.||+ .+|++.
T Consensus 356 ~mL~SDlaL~~Dp--~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~ 404 (716)
T TIGR00198 356 IMLDADLALRFDP--EFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKS 404 (716)
T ss_pred CccchhHHhccCc--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchh
Confidence 8999999999999 9999999999999999999999999999 456544
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=1.5e-48 Score=403.94 Aligned_cols=257 Identities=22% Similarity=0.352 Sum_probs=224.0
Q ss_pred HHHHHHHHHHHHhhC--------cchhhHHHHHHhhhccC-------CCCC-cceecCCCCCCccccccCCCCCchhhHH
Q 018871 40 LNTIEDVLKKAFSSD--------IRIGASLIRLHFHDCFV-------DGCD-ASILLDSTNTIDSEKFAAPNNNSARGFE 103 (349)
Q Consensus 40 e~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSiLl~~~~~~~~Ek~~~~N~~~~rg~~ 103 (349)
.+.|+++|++.+... ...+|.+|||+||++.+ |||+ |+|.+ .+|.+++.|.++.+++.
T Consensus 56 ~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf------~pe~~w~~N~gL~ka~~ 129 (726)
T PRK15061 56 LEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------APLNSWPDNVNLDKARR 129 (726)
T ss_pred HHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccC------cccccchhhhhHHHHHH
Confidence 467999999999865 36999999999999985 8997 77866 57999999999889999
Q ss_pred HHHHHHHHHHhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhh--------------------------
Q 018871 104 VIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRA-------------------------- 157 (349)
Q Consensus 104 ~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 157 (349)
+++.||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 130 ~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl 205 (726)
T PRK15061 130 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPL 205 (726)
T ss_pred HHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccch
Confidence 999999988 45799999999999999999999999999999998654321
Q ss_pred ------------hcccCCCCCCCCHHHHHHHHHhcCCCCcccceeec-cccccccccccccccccccCCCCCCCCCCCCH
Q 018871 158 ------------LANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS-GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDA 224 (349)
Q Consensus 158 ------------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~ 224 (349)
+-+..+|+|..++.+|++.|.+|||+++ |||||+ ||||||++||..|.+|| .+||.+++
T Consensus 206 ~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDe-EtVALiaGgHT~GkaHca~~~~rl-------gpdP~~a~ 277 (726)
T PRK15061 206 AAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGDASHV-------GPEPEAAP 277 (726)
T ss_pred hhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHH-HheeeccCCceeeeCCCcCccccc-------CCCCCcCH
Confidence 0112489999999999999999999999 999995 99999999999999998 26999999
Q ss_pred HHHHHHH--hcCCCCCC-CCcccccC---CCCCcccchHHHHHhhcC---------------------------------
Q 018871 225 TFLQQLR--KLCPQGGN-GGVLANFD---VTTPDVFDNKYFSNLRGR--------------------------------- 265 (349)
Q Consensus 225 ~~~~~L~--~~Cp~~~~-~~~~~~~D---~~tp~~FDn~Yy~nl~~~--------------------------------- 265 (349)
.|.+.|. ..||...+ +..+..+| ..||.+|||+||++|+.+
T Consensus 278 ~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~ 357 (726)
T PRK15061 278 IEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSK 357 (726)
T ss_pred HHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCccccccc
Confidence 9999985 89997432 33355688 579999999999999984
Q ss_pred ---ccccccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhc--CCCCCC
Q 018871 266 ---KGLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGN--LKPLTG 316 (349)
Q Consensus 266 ---~glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~--lgvltG 316 (349)
.++|+||++|..|| +++++|++||.|+++|+++|++||.||+. +|+++-
T Consensus 358 ~~~~~MLtSD~AL~~DP--~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~r 411 (726)
T PRK15061 358 KHAPTMLTTDLALRFDP--EYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSR 411 (726)
T ss_pred ccCcccccccHHhhcCC--cHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhh
Confidence 58999999999999 99999999999999999999999999954 666553
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=6.5e-49 Score=368.93 Aligned_cols=232 Identities=25% Similarity=0.346 Sum_probs=183.3
Q ss_pred CCcccccCCChhHHHHHHHHHHHHHhhCcchhhHHHHHHhhhcc-------CCCCCcceecCCCCCCccccc-cCCCCCc
Q 018871 27 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCF-------VDGCDASILLDSTNTIDSEKF-AAPNNNS 98 (349)
Q Consensus 27 L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSiLl~~~~~~~~Ek~-~~~N~~~ 98 (349)
++.+||.. ..-+.|...-..+...++++++.+|||+||||| ++||||||+++.. .+|+. .+.|. .
T Consensus 14 ~~~g~~~~---~f~~~v~~c~~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~-~ 86 (264)
T cd08201 14 LQSGYSAR---GFVAGVTPCTDCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNT-T 86 (264)
T ss_pred hcccceec---ccccccccccccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhh-c
Confidence 34555553 122334444444556889999999999999999 8999999999742 46777 44454 6
Q ss_pred hhhHHHHHHHHHHHHhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhhhcccCCCCCCCCHHHHHHHHH
Q 018871 99 ARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFR 178 (349)
Q Consensus 99 ~rg~~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~ 178 (349)
+++|+.|+.+ +||||||||||+|+||+.+|||.|+|++||+|++.+.+. .||.|+.++++|++.|+
T Consensus 87 l~~~~~i~~~----------~VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa 152 (264)
T cd08201 87 LNFFVNFYSP----------RSSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFR 152 (264)
T ss_pred cccceeeccC----------ccCHHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHH
Confidence 7888877553 699999999999999999999999999999999988642 49999999999999999
Q ss_pred hcCCCCcccceeecc-ccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCcccchH
Q 018871 179 NVGLNDKLDLVALSG-AHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNK 257 (349)
Q Consensus 179 ~~Gl~~~~dlVaLsG-aHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~FDn~ 257 (349)
++||+++ |||+||| |||||++||..|.+++- |.. ..+...++| .||.+|||+
T Consensus 153 ~~Gfs~~-DmVaLsggaHTiG~ahc~~f~~~~~---------~g~----------------~~~~~~p~d-stp~~FDn~ 205 (264)
T cd08201 153 RQGFSTS-EMIALVACGHTLGGVHSEDFPEIVP---------PGS----------------VPDTVLQFF-DTTIQFDNK 205 (264)
T ss_pred HcCCChH-HHheeecCCeeeeecccccchhhcC---------Ccc----------------ccCCCCCCC-CCccccchH
Confidence 9999999 9999996 99999999998776531 100 001234577 599999999
Q ss_pred HHHHhhcCcc----------ccccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhc
Q 018871 258 YFSNLRGRKG----------LLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGN 310 (349)
Q Consensus 258 Yy~nl~~~~g----------lL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 310 (349)
||.+++.+.. .+.||..+++..++.| ++..| +++.|.+..+..+.||.+
T Consensus 206 ~f~E~l~g~~~~~L~~~~~~~~~sd~r~f~~d~n~t---~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 206 VVTEYLSGTTNNPLVVGPNNTTNSDLRIFSSDGNVT---MNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred HHHHHhcCCCCCceeecCCCCccchhhheecCccHH---HHHhc-ChHHHHHHHHHHHHHHhC
Confidence 9999998642 4589999987653344 46666 789999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=8.1e-39 Score=304.14 Aligned_cols=221 Identities=19% Similarity=0.238 Sum_probs=180.9
Q ss_pred HHHHHHHhhCcchhhHHHHHHhhhccC-------CCCCcc-eecCCCCCCccccccCCCCC--chhhHHHHHHHHHHHHh
Q 018871 45 DVLKKAFSSDIRIGASLIRLHFHDCFV-------DGCDAS-ILLDSTNTIDSEKFAAPNNN--SARGFEVIDNMKAAVER 114 (349)
Q Consensus 45 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-iLl~~~~~~~~Ek~~~~N~~--~~rg~~~I~~iK~~le~ 114 (349)
+.+++.+......++.||||+||++.+ |||+|+ |.| .+|++++.|.+ +.+.+.+++.||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 567778888888999999999999985 899999 766 57999999998 77899999999999853
Q ss_pred h-CC-CCCCHHHHHHHhhhhHhhhcCC-----CCccccCCCCCCcchhhhhc--ccCCCCCCC------------CHHHH
Q 018871 115 A-CP-RVVSCADILTIAAERSVALSGG-----PSWAVPLGRRDSRTANRALA--NQNLPGPFD------------TLDEL 173 (349)
Q Consensus 115 ~-cp-~~VScADilalAar~aV~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~~------------~~~~l 173 (349)
. -+ ..||.||+|+||+..|||.+|| |.|++.+||.|...+..... ...+|.+.. ..+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 2 12 2799999999999999999999 99999999999987643211 113453321 34779
Q ss_pred HHHHHhcCCCCcccceeecccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCc
Q 018871 174 KSSFRNVGLNDKLDLVALSGAH-TFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPD 252 (349)
Q Consensus 174 ~~~F~~~Gl~~~~dlVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~ 252 (349)
++.|.++||+++ |||||+||| ++|+.|..+ +.| .++ .+|.
T Consensus 171 rd~f~rlglsd~-EmvaL~Gg~r~lG~~~~~s-------~~G-------------------------~wT------~~p~ 211 (297)
T cd08200 171 VDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHG-------------------------VFT------DRPG 211 (297)
T ss_pred HHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCC-------------------------CCc------CCCC
Confidence 999999999999 999999997 699877421 111 121 4799
Q ss_pred ccchHHHHHhhcC--------------------cc-----ccccchhhcCCChhhHHHHHHHhhcC--HHHHHHHHHHHH
Q 018871 253 VFDNKYFSNLRGR--------------------KG-----LLQSDQELFSTPGADTAAIVEDFGRN--QNAFFKNFVTSM 305 (349)
Q Consensus 253 ~FDn~Yy~nl~~~--------------------~g-----lL~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~Am 305 (349)
+|||.||+||+.. .| .+++|..|..|+ +.|++|+.||.| ++.|++||++||
T Consensus 212 ~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~--~~R~~ve~YA~dd~~~~F~~DF~~A~ 289 (297)
T cd08200 212 VLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRAVAEVYASDDAQEKFVKDFVAAW 289 (297)
T ss_pred ccccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCH--HHHHHHHHHhcccchhHHHHHHHHHH
Confidence 9999999999852 01 267899999999 999999999998 999999999999
Q ss_pred HHhhcCC
Q 018871 306 IRMGNLK 312 (349)
Q Consensus 306 ~Km~~lg 312 (349)
.||+++.
T Consensus 290 ~Klmeld 296 (297)
T cd08200 290 TKVMNLD 296 (297)
T ss_pred HHHHhcC
Confidence 9999875
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=8.1e-34 Score=295.97 Aligned_cols=220 Identities=20% Similarity=0.247 Sum_probs=177.1
Q ss_pred HHHHHHHH---HHhhCcchhhHHHHHHhhhccC-------CCCCcc-eecCCCCCCccccccCCC--CCchhhHHHHHHH
Q 018871 42 TIEDVLKK---AFSSDIRIGASLIRLHFHDCFV-------DGCDAS-ILLDSTNTIDSEKFAAPN--NNSARGFEVIDNM 108 (349)
Q Consensus 42 iVr~~v~~---~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-iLl~~~~~~~~Ek~~~~N--~~~~rg~~~I~~i 108 (349)
+|+++|.. .+......++.|||++||++.+ ||++|+ |.| .+|++++.| .++.+.+.+++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl------~pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRL------EPQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeec------chhcCcccCCHHHHHHHHHHHHHH
Confidence 44555554 3556777889999999999985 899999 777 479999999 7788899999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHhhhhHhhhc---CCC--CccccCCCCCCcchhhhhcccCCC-----C----------CCC
Q 018871 109 KAAVERACPRVVSCADILTIAAERSVALS---GGP--SWAVPLGRRDSRTANRALANQNLP-----G----------PFD 168 (349)
Q Consensus 109 K~~le~~cp~~VScADilalAar~aV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP-----~----------p~~ 168 (349)
|+++.. +.||.||+|+||+..|||.+ ||| .+++.+||.|.+..... +++..| + ...
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~td-~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMTD-AESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCCC-ccccccCCCCCcccchhccccccCC
Confidence 998852 27999999999999999999 898 57899999999876432 222222 1 112
Q ss_pred CHHHHHHHHHhcCCCCcccceeeccc-cccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccC
Q 018871 169 TLDELKSSFRNVGLNDKLDLVALSGA-HTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFD 247 (349)
Q Consensus 169 ~~~~l~~~F~~~Gl~~~~dlVaLsGa-HTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D 247 (349)
....|++.|..+||+++ |||||+|| |++|+.|..+ +.| .+ .
T Consensus 579 ~~~~l~d~a~~lglt~~-EmvaL~Gg~r~lG~~~~~s-------~~G-------------------------~~-----T 620 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAP-EMTVLIGGMRVLGANHGGS-------KHG-------------------------VF-----T 620 (716)
T ss_pred HHHHHHHHHHhCCCChH-HHHheecchhhccccCCCC-------CCC-------------------------CC-----c
Confidence 35668999999999999 99999998 5999988532 111 11 1
Q ss_pred CCCCcccchHHHHHhhcCc--------------------c---cc--ccchhhcCCChhhHHHHHHHhhcCH--HHHHHH
Q 018871 248 VTTPDVFDNKYFSNLRGRK--------------------G---LL--QSDQELFSTPGADTAAIVEDFGRNQ--NAFFKN 300 (349)
Q Consensus 248 ~~tp~~FDn~Yy~nl~~~~--------------------g---lL--~SD~~L~~d~~~~t~~~V~~yA~d~--~~F~~~ 300 (349)
.+|.+|||.||+||+... | ++ ++|..|..|+ +.|++|+.||+|+ +.|++|
T Consensus 621 -~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~--~lra~aE~YA~dd~~~~F~~D 697 (716)
T TIGR00198 621 -DRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNS--ILRAVAEVYAQDDAREKFVKD 697 (716)
T ss_pred -CCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCH--HHHHHHHHHhcccccchHHHH
Confidence 479999999999998621 1 22 7799999999 9999999999997 899999
Q ss_pred HHHHHHHhhcCC
Q 018871 301 FVTSMIRMGNLK 312 (349)
Q Consensus 301 Fa~Am~Km~~lg 312 (349)
|++||.|+++++
T Consensus 698 F~~Aw~Klm~ld 709 (716)
T TIGR00198 698 FVAAWTKVMNLD 709 (716)
T ss_pred HHHHHHHHHhCC
Confidence 999999999987
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.9e-33 Score=290.41 Aligned_cols=220 Identities=20% Similarity=0.258 Sum_probs=181.3
Q ss_pred HHHHHHHhhCcchhhHHHHHHhhhccC-------CCCCcc-eecCCCCCCccccccCCCC--CchhhHHHHHHHHHHHHh
Q 018871 45 DVLKKAFSSDIRIGASLIRLHFHDCFV-------DGCDAS-ILLDSTNTIDSEKFAAPNN--NSARGFEVIDNMKAAVER 114 (349)
Q Consensus 45 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-iLl~~~~~~~~Ek~~~~N~--~~~rg~~~I~~iK~~le~ 114 (349)
..+++.+....-..+.|||++||++.+ ||++|+ |.| .+|++++.|. ++.+.+++++.||++++.
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl------~Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRL------APQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceec------ccccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 667777888888899999999999985 899999 877 4699999999 778899999999999965
Q ss_pred hC--CCCCCHHHHHHHhhhhHhhhc---CC--CCccccCCCCCCcchhhhhccc---CCCCCC------------CCHHH
Q 018871 115 AC--PRVVSCADILTIAAERSVALS---GG--PSWAVPLGRRDSRTANRALANQ---NLPGPF------------DTLDE 172 (349)
Q Consensus 115 ~c--p~~VScADilalAar~aV~~~---GG--P~~~v~~GR~D~~~s~~~~~~~---~lP~p~------------~~~~~ 172 (349)
.- ...||.||+|+||+..|||.+ || |.+++.+||.|.+..... +++ .+|.+. .....
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td-~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTD-VESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCC-cccccccCCCCccccccccccCCCCHHHH
Confidence 32 236999999999999999999 68 999999999999875432 222 456543 13478
Q ss_pred HHHHHHhcCCCCcccceeecccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCC
Q 018871 173 LKSSFRNVGLNDKLDLVALSGAH-TFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTP 251 (349)
Q Consensus 173 l~~~F~~~Gl~~~~dlVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp 251 (349)
|++.|.++||+++ |||||+||| ++|..|-.+ +.| .++ .+|
T Consensus 595 L~d~a~~lglt~~-EmvaL~Gg~r~Lg~~~~~S-------~~G-------------------------~~T------~~p 635 (726)
T PRK15061 595 LVDKAQLLTLTAP-EMTVLVGGLRVLGANYGGS-------KHG-------------------------VFT------DRP 635 (726)
T ss_pred HHHHHHhCCCChH-HHhheecchhhcccCCCCC-------CCC-------------------------CCc------CCC
Confidence 9999999999999 999999997 788877321 011 111 479
Q ss_pred cccchHHHHHhhcC----------c----------c---c--cccchhhcCCChhhHHHHHHHhhcC--HHHHHHHHHHH
Q 018871 252 DVFDNKYFSNLRGR----------K----------G---L--LQSDQELFSTPGADTAAIVEDFGRN--QNAFFKNFVTS 304 (349)
Q Consensus 252 ~~FDn~Yy~nl~~~----------~----------g---l--L~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~A 304 (349)
.+|||.||+||+.. . | + +++|..|..|+ +.|++|+.||.| ++.|++||++|
T Consensus 636 ~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds--~lRa~aEvYA~dd~~~kF~~DF~~A 713 (726)
T PRK15061 636 GVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNS--QLRALAEVYASDDAKEKFVRDFVAA 713 (726)
T ss_pred CccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCH--HHHHHHHHHhcccchhHHHHHHHHH
Confidence 99999999999852 1 1 1 47899999999 999999999999 99999999999
Q ss_pred HHHhhcCC
Q 018871 305 MIRMGNLK 312 (349)
Q Consensus 305 m~Km~~lg 312 (349)
|.|+++++
T Consensus 714 w~Kvmeld 721 (726)
T PRK15061 714 WTKVMNLD 721 (726)
T ss_pred HHHHHhCC
Confidence 99999987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.94 E-value=7.8e-27 Score=233.03 Aligned_cols=254 Identities=20% Similarity=0.318 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHhhCc--------chhhHHHHHHhhhccC-------CCCCcceecCCCCCCccccccCCCCCchhhHHHH
Q 018871 41 NTIEDVLKKAFSSDI--------RIGASLIRLHFHDCFV-------DGCDASILLDSTNTIDSEKFAAPNNNSARGFEVI 105 (349)
Q Consensus 41 ~iVr~~v~~~~~~~~--------~~aa~llRL~FHDcfv-------~GcDgSiLl~~~~~~~~Ek~~~~N~~~~rg~~~I 105 (349)
..|+..++..+.... ..+|.+|||+||-+.+ ||..+. .-++.++..+|.|.++.+++.++
T Consensus 70 ~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G-----~qRFaPlnSWPDN~nLDKarRLL 144 (730)
T COG0376 70 AAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGG-----QQRFAPLNSWPDNANLDKARRLL 144 (730)
T ss_pred HHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCC-----ceecccccCCCcccchHHHHHHh
Confidence 467777777777654 4789999999999975 454433 12356789999999999999999
Q ss_pred HHHHHHHHhhCCCCCCHHHHHHHhhhhHhhhcCCCCccccCCCCCCcchhhh----------------------------
Q 018871 106 DNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRA---------------------------- 157 (349)
Q Consensus 106 ~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~---------------------------- 157 (349)
..||+++ +..+|+||+|.|++..|++.+|++.+.+..||.|--.+...
T Consensus 145 WPIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaav 220 (730)
T COG0376 145 WPIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAV 220 (730)
T ss_pred hhHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhh
Confidence 9999988 56999999999999999999999999999999998766540
Q ss_pred ---------hcccCCCCCCCCHHHHHHHHHhcCCCCcccceeecc-ccccccccccccccccccCCCCCCCCCCCCHHHH
Q 018871 158 ---------LANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSG-AHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFL 227 (349)
Q Consensus 158 ---------~~~~~lP~p~~~~~~l~~~F~~~Gl~~~~dlVaLsG-aHTiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~ 227 (349)
+-++..|+|..+..+++..|++|+++++ |.|||++ |||+|++|-..-.+.+ .++|.-.+--.
T Consensus 221 qMGLIYVNPEGpng~PDpl~aA~dIRetFaRMaMNDe-ETVALiaGGHtfGKtHGag~a~~v-------g~ePe~a~ie~ 292 (730)
T COG0376 221 QMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDE-ETVALIAGGHTFGKTHGAGPASNV-------GPEPEAAPIEQ 292 (730)
T ss_pred eeeeEEeCCCCCCCCCChhhhHHHHHHHHHHhcCCcH-hhhhhhhcccccccccCCCchhhc-------CCCccccchhh
Confidence 1234589999999999999999999999 9999986 9999999965311111 23443222111
Q ss_pred HH--HHhcCCCCCCCCc-ccccC---CCCCcccchHHHHHhhcC-----------------------------------c
Q 018871 228 QQ--LRKLCPQGGNGGV-LANFD---VTTPDVFDNKYFSNLRGR-----------------------------------K 266 (349)
Q Consensus 228 ~~--L~~~Cp~~~~~~~-~~~~D---~~tp~~FDn~Yy~nl~~~-----------------------------------~ 266 (349)
+- ....|....+..+ +..+. ..||++|||+||.+|... .
T Consensus 293 qGlGW~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p 372 (730)
T COG0376 293 QGLGWANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGP 372 (730)
T ss_pred hccccccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCc
Confidence 21 1223333222211 11121 248999999999999862 1
Q ss_pred cccccchhhcCCChhhHHHHHHHhhcCHHHHHHHHHHHHHHhhcCCC
Q 018871 267 GLLQSDQELFSTPGADTAAIVEDFGRNQNAFFKNFVTSMIRMGNLKP 313 (349)
Q Consensus 267 glL~SD~~L~~d~~~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv 313 (349)
.+|++|.+|--|| ..++|.++|.+|++.|.+.|++||-||..-+.
T Consensus 373 ~MlttDlaLr~DP--~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRDM 417 (730)
T COG0376 373 MMLTTDLALRFDP--EYEKISRRFLEDPDEFADAFARAWFKLTHRDM 417 (730)
T ss_pred eeeccchhhhcCh--HHHHHHHHHHhCHHHHHHHHHHHHHHHhhccC
Confidence 3799999999999 99999999999999999999999999987553
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.55 E-value=7.8e-14 Score=140.48 Aligned_cols=217 Identities=20% Similarity=0.285 Sum_probs=159.8
Q ss_pred HHHHHHHhhCcchhhHHHHHHhhhccC-------CCCCcc-eecCCCCCCccccccCCCCC--chhhHHHHHHHHHHHHh
Q 018871 45 DVLKKAFSSDIRIGASLIRLHFHDCFV-------DGCDAS-ILLDSTNTIDSEKFAAPNNN--SARGFEVIDNMKAAVER 114 (349)
Q Consensus 45 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-iLl~~~~~~~~Ek~~~~N~~--~~rg~~~I~~iK~~le~ 114 (349)
..++..+....-....|+-.+|..+-+ ||.+|. |.| .+.|+++.|.. +.+-+.++++|.+.++
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirL------aPqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRL------APQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEee------cccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 466777888888899999999988854 789988 556 46899999964 4478899999999886
Q ss_pred hCCCCCCHHHHHHHhhhhHhhhc---CCCC--ccccCCCCCCcchhhhhcccCC--CCC------------CCCHHHHHH
Q 018871 115 ACPRVVSCADILTIAAERSVALS---GGPS--WAVPLGRRDSRTANRALANQNL--PGP------------FDTLDELKS 175 (349)
Q Consensus 115 ~cp~~VScADilalAar~aV~~~---GGP~--~~v~~GR~D~~~s~~~~~~~~l--P~p------------~~~~~~l~~ 175 (349)
..||.||+|+|++..+|+.+ +|-. +|+..||.|.+........-.. |-. .....-|++
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 47999999999999999987 6765 4667999999776533111011 211 112344788
Q ss_pred HHHhcCCCCcccceeecccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCcccccCCCCCccc
Q 018871 176 SFRNVGLNDKLDLVALSGAH-TFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVF 254 (349)
Q Consensus 176 ~F~~~Gl~~~~dlVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~dp~ld~~~~~~L~~~Cp~~~~~~~~~~~D~~tp~~F 254 (349)
.-+-.+|+.. ||++|.||- -+|..+ .| ....++-| .|..+
T Consensus 602 kAqlL~Ltap-emtVLiGGlRvLg~n~-----------g~-------------------------s~~GVfT~--~pg~L 642 (730)
T COG0376 602 KAQLLTLTAP-EMTVLIGGLRVLGANY-----------GG-------------------------SKHGVFTD--RPGVL 642 (730)
T ss_pred HHHHhccCCc-cceEEEcceEeeccCC-----------CC-------------------------Cccceecc--Ccccc
Confidence 8888999999 999999974 333322 11 11223333 57777
Q ss_pred chHHHHHhhcC----------c----------cc-----cccchhhcCCChhhHHHHHHHhhcC--HHHHHHHHHHHHHH
Q 018871 255 DNKYFSNLRGR----------K----------GL-----LQSDQELFSTPGADTAAIVEDFGRN--QNAFFKNFVTSMIR 307 (349)
Q Consensus 255 Dn~Yy~nl~~~----------~----------gl-----L~SD~~L~~d~~~~t~~~V~~yA~d--~~~F~~~Fa~Am~K 307 (349)
.|.||.||+.- + |- -..|..+-+++ +.|.+.+.||.+ ++.|.+||+.||.|
T Consensus 643 tndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns--~LRA~aEVYa~dda~ekFv~DFvaaw~k 720 (730)
T COG0376 643 TNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNS--ELRALAEVYASDDAKEKFVKDFVAAWTK 720 (730)
T ss_pred cchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcH--HHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 78888888752 1 21 24577777777 999999999975 78999999999999
Q ss_pred hhcCC
Q 018871 308 MGNLK 312 (349)
Q Consensus 308 m~~lg 312 (349)
++++.
T Consensus 721 VMn~D 725 (730)
T COG0376 721 VMNLD 725 (730)
T ss_pred Hhccc
Confidence 99875
No 19
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=58.25 E-value=7.6 Score=31.68 Aligned_cols=21 Identities=48% Similarity=0.566 Sum_probs=13.7
Q ss_pred CcchHHHHHHHHHHHHHHhcC
Q 018871 1 MASLRYLLAAALLVAFVLEGS 21 (349)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (349)
||+..+++++++|++++|..+
T Consensus 1 MaSK~~llL~l~LA~lLlisS 21 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALLLISS 21 (95)
T ss_pred CchhHHHHHHHHHHHHHHHHh
Confidence 887776777766666655443
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=43.08 E-value=21 Score=28.26 Aligned_cols=31 Identities=16% Similarity=0.236 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcCccccccccccCC
Q 018871 297 FFKNFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGN 331 (349)
Q Consensus 297 F~~~Fa~Am~Km~~lgvltG~~GeIR~~C~~~n~~ 331 (349)
....|..||.||+.||. +-.---+||.|-+.
T Consensus 3 m~~~F~~am~KlavLG~----d~~~LiDCSdVIP~ 33 (80)
T PF11895_consen 3 MQSAFKAAMAKLAVLGH----DRSDLIDCSDVIPV 33 (80)
T ss_dssp HHHHHHHHHHHHCTTTS-----GGGSEE-GGGS--
T ss_pred HHHHHHHHHHHHHHhcC----ChhhcccchhhccC
Confidence 45789999999999875 23344589988754
No 21
>PTZ00411 transaldolase-like protein; Provisional
Probab=24.82 E-value=49 Score=33.03 Aligned_cols=49 Identities=10% Similarity=0.085 Sum_probs=29.2
Q ss_pred cCCCCccccCCCCCCcchhhhhcccCCCCC---CCCHHHHHHHHHhcCCCCc
Q 018871 137 SGGPSWAVPLGRRDSRTANRALANQNLPGP---FDTLDELKSSFRNVGLNDK 185 (349)
Q Consensus 137 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Gl~~~ 185 (349)
+|-..+..++||-+-..-.........+.. -..+.++.++|++.|+..+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~ 231 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTI 231 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeE
Confidence 477888999999865422111111111212 2356778888988998765
No 22
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=20.32 E-value=60 Score=28.23 Aligned_cols=33 Identities=24% Similarity=0.435 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHhcCCCCcccc-eeecccccccccc
Q 018871 168 DTLDELKSSFRNVGLNDKLDL-VALSGAHTFGRAQ 201 (349)
Q Consensus 168 ~~~~~l~~~F~~~Gl~~~~dl-VaLsGaHTiG~ah 201 (349)
+++.+.+-.|+++||++. ++ |.|--+|-||+++
T Consensus 31 ddvkeqI~K~akKGltps-qIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPS-QIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChh-HceeeeecccCcchhh
Confidence 456677778999999999 86 5566799999876
Done!