Your job contains 1 sequence.
>018874
MSYSRDSSENVVHIIVGNGAPEHWIPNPNDSSVWATEDDYPDDPPSISNSNCQSQTRSNS
EQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFRNGTCPYITNCNFAHSIEELRRPPP
NWQEIVAAHEEERASTNEIPREEFQIPSIVSTNFAVETQRSYKGRHCKKFYTEEGCPYGE
NCTFLHDEQSKNRESVAISLGPGGYGGGGAAAAAAGNNIGVSNVKPSNWKTRICNKWELT
GYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAAPSDSKLVGVPSKTPVDTVVASVTS
VPHADVYHMGVPSQRSSIVVQRPGQRSHEKWKGPDKISRIYGDWIDDIE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018874
(349 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2028306 - symbol:AT1G32360 species:3702 "Arabi... 668 3.0e-110 2
TAIR|locus:2090669 - symbol:AT3G19360 species:3702 "Arabi... 265 4.7e-44 2
TAIR|locus:2062476 - symbol:AT2G35430 species:3702 "Arabi... 368 7.4e-34 1
TAIR|locus:2170169 - symbol:AT5G06770 species:3702 "Arabi... 114 2.7e-10 2
SGD|S000004126 - symbol:TIS11 "mRNA-binding protein expre... 103 1.4e-09 2
UNIPROTKB|G3V2D5 - symbol:ZFP36L1 "Zinc finger protein 36... 108 1.6e-09 2
TAIR|locus:2099292 - symbol:AT3G12130 species:3702 "Arabi... 108 1.7e-09 2
UNIPROTKB|G3V2P5 - symbol:ZFP36L1 "Zinc finger protein 36... 108 4.9e-09 2
MGI|MGI:107946 - symbol:Zfp36l1 "zinc finger protein 36, ... 102 7.0e-09 2
CGD|CAL0004295 - symbol:orf19.5334 species:5476 "Candida ... 105 7.0e-09 2
RGD|62009 - symbol:Zfp36l1 "zinc finger protein 36, C3H t... 100 1.5e-08 2
UNIPROTKB|P17431 - symbol:Zfp36l1 "Zinc finger protein 36... 100 1.5e-08 2
UNIPROTKB|A7MB98 - symbol:ZFP36L1 "Uncharacterized protei... 104 1.7e-08 2
UNIPROTKB|Q07352 - symbol:ZFP36L1 "Zinc finger protein 36... 101 3.8e-08 2
UNIPROTKB|E2R2W0 - symbol:ZFP36L1 "Uncharacterized protei... 99 6.4e-08 2
UNIPROTKB|I3LB77 - symbol:ZFP36L1 "Uncharacterized protei... 99 6.4e-08 2
ZFIN|ZDB-GENE-030131-2391 - symbol:zfp36l1b "zinc finger ... 98 7.3e-08 2
UNIPROTKB|Q805B4 - symbol:zfp36l2-B "Zinc finger protein ... 97 2.8e-07 2
WB|WBGene00013319 - symbol:ccch-5 species:6239 "Caenorhab... 92 7.0e-07 2
UNIPROTKB|A4IIN5 - symbol:zfp36l2 "Zinc finger protein 36... 92 7.8e-07 2
UNIPROTKB|Q6S9E0 - symbol:ZFP36 "Tristetraprolin" species... 95 8.5e-07 2
WB|WBGene00009539 - symbol:F38C2.7 species:6239 "Caenorha... 91 1.0e-06 2
SGD|S000002558 - symbol:CTH1 "Member of the CCCH zinc fin... 99 1.2e-06 2
UNIPROTKB|Q7ZXW9 - symbol:zfp36l2-A "Zinc finger protein ... 92 1.3e-06 2
UNIPROTKB|F1LVT2 - symbol:F1LVT2 "Uncharacterized protein... 97 1.3e-06 2
ZFIN|ZDB-GENE-990806-20 - symbol:cth1 "cth1" species:7955... 85 1.3e-06 3
ZFIN|ZDB-GENE-030131-9860 - symbol:zfp36l1a "zinc finger ... 91 1.4e-06 2
WB|WBGene00013796 - symbol:Y116A8C.19 species:6239 "Caeno... 89 1.5e-06 2
WB|WBGene00003228 - symbol:mex-1 species:6239 "Caenorhabd... 99 2.0e-06 2
POMBASE|SPBC1718.07c - symbol:zfs1 "CCCH tandem zinc fing... 95 2.1e-06 2
UNIPROTKB|F1MV20 - symbol:F1MV20 "Uncharacterized protein... 94 2.6e-06 2
UNIPROTKB|F1S5I0 - symbol:ZFP36L2 "Uncharacterized protei... 94 2.9e-06 2
TAIR|locus:2199352 - symbol:AT1G68200 species:3702 "Arabi... 123 2.9e-06 2
RGD|1559581 - symbol:Zfp36l3 "zinc finger protein 36, C3H... 97 3.4e-06 2
MGI|MGI:107945 - symbol:Zfp36l2 "zinc finger protein 36, ... 90 3.6e-06 2
WB|WBGene00013797 - symbol:Y116A8C.20 species:6239 "Caeno... 87 3.8e-06 2
WB|WBGene00013794 - symbol:dct-13 species:6239 "Caenorhab... 88 3.9e-06 2
WB|WBGene00007961 - symbol:C35D6.4 species:6239 "Caenorha... 86 4.1e-06 2
UNIPROTKB|P26651 - symbol:ZFP36 "Tristetraprolin" species... 96 4.3e-06 2
UNIPROTKB|G3MWV8 - symbol:ZFP36 "Tristetraprolin" species... 95 4.4e-06 2
UNIPROTKB|Q0VCR3 - symbol:ZFP36 "Tristetraprolin" species... 95 4.4e-06 2
UNIPROTKB|E2RKS9 - symbol:ZFP36 "Uncharacterized protein"... 96 5.3e-06 2
UNIPROTKB|J9NWC9 - symbol:ZFP36L2 "Uncharacterized protei... 93 5.8e-06 2
RGD|1308913 - symbol:Zfp36l2 "zinc finger protein 36, C3H... 90 6.0e-06 2
DICTYBASE|DDB_G0285973 - symbol:DDB_G0285973 "Butyrate re... 94 6.7e-06 2
UNIPROTKB|D0VE66 - symbol:LOC100623625 "Tristetraprolin" ... 95 7.2e-06 2
WB|WBGene00003864 - symbol:oma-1 species:6239 "Caenorhabd... 90 7.7e-06 2
UNIPROTKB|G5EC86 - symbol:oma-1 "Protein OMA-1" species:6... 90 7.7e-06 2
UNIPROTKB|P47974 - symbol:ZFP36L2 "Zinc finger protein 36... 89 1.0e-05 2
ZFIN|ZDB-GENE-030131-5873 - symbol:zfp36l2 "zinc finger p... 89 1.2e-05 2
MGI|MGI:99180 - symbol:Zfp36 "zinc finger protein 36" spe... 95 1.4e-05 2
TAIR|locus:2033384 - symbol:AT1G66810 species:3702 "Arabi... 113 1.5e-05 2
WB|WBGene00009537 - symbol:ccch-2 species:6239 "Caenorhab... 82 1.7e-05 2
WB|WBGene00013370 - symbol:Y60A9.3 species:6239 "Caenorha... 88 2.0e-05 2
UNIPROTKB|J9NTC7 - symbol:ZFP36 "Uncharacterized protein"... 88 3.2e-05 2
ZFIN|ZDB-GENE-030131-6366 - symbol:zgc:162730 "zgc:162730... 88 3.8e-05 2
RGD|620722 - symbol:Zfp36 "zinc finger protein 36" specie... 95 4.4e-05 2
UNIPROTKB|P47973 - symbol:Zfp36 "Tristetraprolin" species... 95 4.4e-05 2
WB|WBGene00004078 - symbol:pos-1 species:6239 "Caenorhabd... 82 5.3e-05 2
UNIPROTKB|P53781 - symbol:ZFP36 "Tristetraprolin" species... 95 0.00012 2
WB|WBGene00003388 - symbol:moe-3 species:6239 "Caenorhabd... 88 0.00025 2
WB|WBGene00004027 - symbol:pie-1 species:6239 "Caenorhabd... 117 0.00027 1
UNIPROTKB|Q94131 - symbol:pie-1 "Pharynx and intestine in... 117 0.00027 1
FB|FBgn0011837 - symbol:Tis11 "Tis11 homolog" species:722... 87 0.00033 2
ZFIN|ZDB-GENE-050913-48 - symbol:zgc:114130 "zgc:114130" ... 82 0.00035 2
WB|WBGene00003865 - symbol:oma-2 species:6239 "Caenorhabd... 85 0.00066 2
>TAIR|locus:2028306 [details] [associations]
symbol:AT1G32360 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC007767 EMBL:AC084110
EMBL:AK118013 EMBL:AY056407 EMBL:AY081710 IPI:IPI00524758
PIR:D86448 RefSeq:NP_564396.1 UniGene:At.15521 UniGene:At.74086
HSSP:P47974 ProteinModelPortal:Q9LQM3 SMR:Q9LQM3 PaxDb:Q9LQM3
PRIDE:Q9LQM3 EnsemblPlants:AT1G32360.1 GeneID:840128
KEGG:ath:AT1G32360 TAIR:At1g32360 eggNOG:NOG288218
HOGENOM:HOG000242590 InParanoid:Q9LQM3 OMA:PREEFQI PhylomeDB:Q9LQM3
ProtClustDB:CLSN2688195 Genevestigator:Q9LQM3 Uniprot:Q9LQM3
Length = 384
Score = 668 (240.2 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 132/214 (61%), Positives = 157/214 (73%)
Query: 3 YSRDSSENVVHII-VGNGAPEHWIPNPNDSSVWATEDDY-------PDDPPSISNSNCQS 54
+ RDS +VVH+I N P++W PN DS+VWATEDDY PD+ +N
Sbjct: 4 HRRDSGGDVVHVIPTNNPPPDNWFPNLGDSAVWATEDDYNRAWAMNPDNTSGDNNGPPNK 63
Query: 55 QTRSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFRNGTCPYITNCNFAHSIEE 114
+TR + P+ S + ++++KAIGKMFFKTKLCCKFR GTCPYITNCNFAH++EE
Sbjct: 64 KTRGS----PSSSSATTTSAASNRTKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHTVEE 119
Query: 115 LRRPPPNWQEIVAAHEEERA--------STNEIPREEFQIPSIVSTNFAVETQRSYKGRH 166
LRRPPPNWQEIVAAHEEER+ S EIPREEFQIPS+VS+ E+ RS+KGRH
Sbjct: 120 LRRPPPNWQEIVAAHEEERSGGMGTPTVSVVEIPREEFQIPSLVSST--AESGRSFKGRH 177
Query: 167 CKKFYTEEGCPYGENCTFLHDEQSKNRESVAISL 200
CKKFYTEEGCPYGE+CTFLHDE S+NRESVAISL
Sbjct: 178 CKKFYTEEGCPYGESCTFLHDEASRNRESVAISL 211
Score = 441 (160.3 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 85/133 (63%), Positives = 93/133 (69%)
Query: 220 GVSNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAAPSD 279
G+ +KPSNWKTRICNKWE+TGYCPFG KCHFAHG ELHRFGGGLVE E D + D
Sbjct: 252 GIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFGGGLVEEEGKDGVSPNPD 311
Query: 280 SKLVGVPSKTPVDTVVASVTSVPH-ADV-YHMGVPSQR-SSIVVQRPGQRSHEKWKGPDK 336
+K K DT VPH AD YH GV QR SS V Q+PG R+H+KWKGP K
Sbjct: 312 TKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSAVTQKPGIRTHQKWKGPAK 371
Query: 337 ISRIYGDWIDDIE 349
ISRIYGDWIDDIE
Sbjct: 372 ISRIYGDWIDDIE 384
>TAIR|locus:2090669 [details] [associations]
symbol:AT3G19360 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 EMBL:AB025624 HSSP:P47974
EMBL:AY037226 EMBL:AY081745 IPI:IPI00533341 RefSeq:NP_566631.1
UniGene:At.22994 ProteinModelPortal:Q9LT81 SMR:Q9LT81 IntAct:Q9LT81
PRIDE:Q9LT81 EnsemblPlants:AT3G19360.1 GeneID:821470
KEGG:ath:AT3G19360 TAIR:At3g19360 eggNOG:NOG138498
HOGENOM:HOG000090850 InParanoid:Q9LT81 OMA:RMCAKFR PhylomeDB:Q9LT81
ProtClustDB:CLSN2688560 Genevestigator:Q9LT81 Uniprot:Q9LT81
Length = 386
Score = 265 (98.3 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 51/120 (42%), Positives = 72/120 (60%)
Query: 79 SKAIGKMFFKTKLCCKFRNGTCPYITNCNFAHSIEELRRPPPNWQEIV----AAHEEERA 134
+K +F+KT++C KFR GTC CNFAH IE+LR+PP NWQEIV A + ER
Sbjct: 97 NKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPAGQDRERE 156
Query: 135 STNEIPREEFQIPSIVSTNFAVETQRSYKGRHCKKFYTEEGCPYGENCTFLHDEQSKNRE 194
E RE + +V+ N+ + + + + C+KF E CPYG+ C F+H++ SK RE
Sbjct: 157 RERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHEDLSKFRE 216
Score = 216 (81.1 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 55/132 (41%), Positives = 71/132 (53%)
Query: 217 NNIGVSNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAA 276
NN GV VK WKTR+C K+++TG CPFG+KCHFAHG ELH G VE E +A
Sbjct: 260 NNGGV--VKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHN-SVGRVEGEA--MNAV 314
Query: 277 PSDSKLVGVPSKTPVDTVVASVTSVPHADVYHMGVPSQRSSIVVQRPGQRSHEKWKGPDK 336
S +K VP+ + +T V AD + +R ++ KW K
Sbjct: 315 ASVNKQAVVPANEAF--AMKPITQVT-ADSSGLNEEGRRKKCLL---------KWSDSKK 362
Query: 337 ISRIYGDWIDDI 348
I+RIYGDWIDD+
Sbjct: 363 INRIYGDWIDDL 374
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 43/155 (27%), Positives = 71/155 (45%)
Query: 55 QTRSNSEQPPNKKSRNG-SQDVNSKSKAIGKMFFKTKLCCKFRNGT-CPYITNCNFAHS- 111
Q R + ++ R + VN+ + K+ + KLC KF G CPY CNF H
Sbjct: 151 QDRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEECPYGDRCNFIHED 210
Query: 112 IEELRRPPPNWQE--IV-----AAHEEERASTN--EIPRE-EFQIPSIVSTNFAVETQRS 161
+ + R +E ++ AA + ++N E+ R+ +P+ ++ V+T
Sbjct: 211 LSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVY- 269
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSKNRESV 196
+K R C KF CP+G+ C F H Q++ SV
Sbjct: 270 WKTRLCMKFDITGQCPFGDKCHFAHG-QAELHNSV 303
>TAIR|locus:2062476 [details] [associations]
symbol:AT2G35430 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC005314 HSSP:P47974
HOGENOM:HOG000242590 EMBL:BT020232 EMBL:BT020553 IPI:IPI00545818
PIR:E84768 RefSeq:NP_181086.2 UniGene:At.49567
ProteinModelPortal:Q5PP65 SMR:Q5PP65 PaxDb:Q5PP65 PRIDE:Q5PP65
EnsemblPlants:AT2G35430.1 GeneID:818109 KEGG:ath:AT2G35430
TAIR:At2g35430 eggNOG:NOG298782 InParanoid:Q5PP65 OMA:PDKISRV
PhylomeDB:Q5PP65 ProtClustDB:CLSN2915129 Genevestigator:Q5PP65
Uniprot:Q5PP65
Length = 252
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 98/241 (40%), Positives = 125/241 (51%)
Query: 119 PPNWQEIVAAHEEERASTNEIPREEFQIPSIVS-TNFAVETQRSY-KGRHCKKFYTEEGC 176
P + V A E++ + I + + PS + ++ + E +S+ K + C KF C
Sbjct: 27 PNSGDSSVWATEDDYSRVWAINSDGAESPSKKTRSSSSSEIGKSFFKTKLCFKFRAGT-C 85
Query: 177 PYG-ENCTFLHDEQSKNRESVAISLXXXXXXXXXXXXXXXXNNIGV-SNV----KPSNWK 230
PY +C F H + ++G NV K NWK
Sbjct: 86 PYSASSCHFAHSAEELRLPPPPPPNWQETVTEASRNRESFAVSLGPRGNVAQTLKSPNWK 145
Query: 231 TRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAAPSDSKLVGVPSKTP 290
TRICNKW+ TGYCPFG+ CHFAHG ELH FGGGLVE E ++A D+K G
Sbjct: 146 TRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRG-----Q 200
Query: 291 VDTVVASVTSVPHADVYHMGVPSQR-SSIVVQRP-GQRSHEKWKGPDKISRIYGDWIDDI 348
VDTV + V+ P GV SQR SS V Q+P G R+ KWKGPDKISR+YGDWIDDI
Sbjct: 201 VDTVTSLVS--P-------GVSSQRTSSAVTQKPNGVRTQRKWKGPDKISRVYGDWIDDI 251
Query: 349 E 349
E
Sbjct: 252 E 252
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 85/193 (44%), Positives = 107/193 (55%)
Query: 1 MSYSRDSSENVVHI-IVGNGAPEHWIPNPNDSSVWATEDDYPDDPPSISNSNCQSQTRSN 59
MS+ RD + VH+ I + PE+ PN DSSVWATEDDY S + S+
Sbjct: 1 MSHRRDYGSDAVHVRITHDPPPENCFPNSGDSSVWATEDDY---------SRVWA-INSD 50
Query: 60 SEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFRNGTCPY-ITNCNFAHSIEELRRP 118
+ P+KK+R+ S S IGK FFKTKLC KFR GTCPY ++C+FAHS EELR P
Sbjct: 51 GAESPSKKTRSSS------SSEIGKSFFKTKLCFKFRAGTCPYSASSCHFAHSAEELRLP 104
Query: 119 PP---NWQEIVAAHEEERASTNEIPREEFQIPSIVSTNFAVETQRS--YKGRHCKKFYTE 173
PP NWQE V AS N RE F + S+ +T +S +K R C K+ T
Sbjct: 105 PPPPPNWQETVT-----EASRN---RESFAV-SLGPRGNVAQTLKSPNWKTRICNKWQTT 155
Query: 174 EGCPYGENCTFLH 186
CP+G +C F H
Sbjct: 156 GYCPFGSHCHFAH 168
>TAIR|locus:2170169 [details] [associations]
symbol:AT5G06770 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00642 Pfam:PF13014
PROSITE:PS50084 PROSITE:PS50103 SMART:SM00322 SMART:SM00356
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 HSSP:P22893
HOGENOM:HOG000238868 ProtClustDB:CLSN2686893 EMBL:AP002032
EMBL:AK117974 EMBL:BT005260 EMBL:AY086759 IPI:IPI00547673
RefSeq:NP_196295.1 UniGene:At.43568 ProteinModelPortal:Q9FG30
SMR:Q9FG30 IntAct:Q9FG30 PaxDb:Q9FG30 PRIDE:Q9FG30
EnsemblPlants:AT5G06770.1 GeneID:830566 KEGG:ath:AT5G06770
TAIR:At5g06770 eggNOG:NOG124614 InParanoid:Q9FG30 OMA:HPGSNYK
PhylomeDB:Q9FG30 Genevestigator:Q9FG30 Uniprot:Q9FG30
Length = 240
Score = 114 (45.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 219 IGVSNVKP---SNWKTRICNKWELTGYCPFGNKCHFAHGIQELHRFG 262
IG KP SN+KT+IC+++ G C +G++CHFAHG EL R G
Sbjct: 193 IGGPEGKPHPGSNYKTKICDRYS-KGNCTYGDRCHFAHGESELRRSG 238
Score = 94 (38.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 155 AVETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
++ T K + C KF++ GCP+G+NC FLH
Sbjct: 30 SISTGLGSKSKPCTKFFSTSGCPFGDNCHFLH 61
Score = 68 (29.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 69 RNGSQDVNSKSKAIGKMFFKTKLCCKFRNGT-CPYITNCNFAHSI 112
+ Q++ S S +G K+K C KF + + CP+ NC+F H +
Sbjct: 22 KRSKQEMESISTGLGS---KSKPCTKFFSTSGCPFGDNCHFLHYV 63
>SGD|S000004126 [details] [associations]
symbol:TIS11 "mRNA-binding protein expressed during iron
starvation" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0006879 "cellular iron
ion homeostasis" evidence=IMP] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 SGD:S000004126 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
EMBL:BK006945 GO:GO:0006879 EMBL:X91258 EMBL:U53881 GO:GO:0000932
GO:GO:0000956 eggNOG:COG5063 GeneTree:ENSGT00530000063262
HOGENOM:HOG000001038 OrthoDB:EOG4W3WXK EMBL:S76619 EMBL:L42134
EMBL:Z73308 EMBL:AY558210 PIR:S59328 RefSeq:NP_013237.1
ProteinModelPortal:P47977 SMR:P47977 DIP:DIP-5614N IntAct:P47977
MINT:MINT-504800 STRING:P47977 EnsemblFungi:YLR136C GeneID:850827
KEGG:sce:YLR136C CYGD:YLR136c NextBio:967088 Genevestigator:P47977
GermOnline:YLR136C Uniprot:P47977
Length = 285
Score = 103 (41.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 217 NNIGVSNVKPS--NWKTRICNKWELTGYCPFGNKCHFAHG 254
+ +G VK S N++T+ C WE GYCP+G +C F HG
Sbjct: 194 HGLGELKVKKSCKNFRTKPCVNWEKLGYCPYGRRCCFKHG 233
Score = 103 (41.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 28/85 (32%), Positives = 40/85 (47%)
Query: 41 PDDPPSISNSNCQSQTRSN-SEQPP-------NKKSRNGSQDVNSKSKAIGKMFFKTKLC 92
PD P S SQ S+Q P ++K + V S+ + K +KT+LC
Sbjct: 116 PDYVPKSSQLPLTSQNLQQLSQQKPKNDASFSSEKESSAQPKVKSQVQETPKQLYKTELC 175
Query: 93 CKFR-NGTCPYITNCNFAHSIEELR 116
F G+CPY + C FAH + EL+
Sbjct: 176 ESFTLKGSCPYGSKCQFAHGLGELK 200
Score = 75 (31.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/83 (26%), Positives = 34/83 (40%)
Query: 105 NCNFAHSIEELRRPPPNWQEIVAAHEEERASTNEIPREEFQIPSIVSTNFAVETQRS-YK 163
N ++ +L N Q++ + AS + +E P + S ET + YK
Sbjct: 115 NPDYVPKSSQLPLTSQNLQQLSQQKPKNDASFSS-EKESSAQPKVKSQ--VQETPKQLYK 171
Query: 164 GRHCKKFYTEEGCPYGENCTFLH 186
C+ F + CPYG C F H
Sbjct: 172 TELCESFTLKGSCPYGSKCQFAH 194
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 160 RSYKGRHCKKFYTEEGCPYGENCTFLHDEQS 190
++++ + C + CPYG C F H + +
Sbjct: 206 KNFRTKPCVNWEKLGYCPYGRRCCFKHGDDN 236
>UNIPROTKB|G3V2D5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006417 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0000288 HGNC:HGNC:1107
ChiTaRS:ZFP36L1 InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2D5 SMR:G3V2D5 Ensembl:ENST00000557022
ArrayExpress:G3V2D5 Bgee:G3V2D5 Uniprot:G3V2D5
Length = 176
Score = 108 (43.1 bits), Expect = 0.00043, P = 0.00043
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 220 GVSNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGIQEL 258
G V S +KT +C +E G C +G+KC FAHGI EL
Sbjct: 84 GGGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHEL 122
Score = 101 (40.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 45 PSISNSNCQSQTRSNSEQP----PNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGT 99
P++S+ + + + RS SE P +K G Q VNS +KT+LC F NG
Sbjct: 55 PALSSRDSRFRDRSFSEGGERLLPTQKQPGGGQ-VNSSR-------YKTELCRPFEENGA 106
Query: 100 CPYITNCNFAHSIEELR 116
C Y C FAH I ELR
Sbjct: 107 CKYGDKCQFAHGIHELR 123
Score = 94 (38.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGG 263
+KT +C + G+CP+G +CHF H +E G
Sbjct: 131 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAG 165
Score = 77 (32.2 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 131 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 160
Score = 63 (27.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 156 VETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
V + R YK C+ F C YG+ C F H
Sbjct: 88 VNSSR-YKTELCRPFEENGACKYGDKCQFAH 117
>TAIR|locus:2099292 [details] [associations]
symbol:AT3G12130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 Pfam:PF00642 PROSITE:PS50084
PROSITE:PS50103 SMART:SM00322 SMART:SM00356 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 EMBL:AC069473
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 EMBL:AP002063 HSSP:P47974
EMBL:BT025032 EMBL:AK227373 EMBL:AY085746 IPI:IPI00526274
RefSeq:NP_566412.1 UniGene:At.27694 ProteinModelPortal:Q9C7C3
SMR:Q9C7C3 PaxDb:Q9C7C3 PRIDE:Q9C7C3 EnsemblPlants:AT3G12130.1
GeneID:820388 KEGG:ath:AT3G12130 TAIR:At3g12130 eggNOG:NOG319230
HOGENOM:HOG000238868 InParanoid:Q9C7C3 OMA:LAIRDHE PhylomeDB:Q9C7C3
ProtClustDB:CLSN2686893 Genevestigator:Q9C7C3 Uniprot:Q9C7C3
Length = 248
Score = 108 (43.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 227 SNWKTRICNKWELTGYCPFGNKCHFAHGIQELHRFG 262
SN+KT+IC ++ G C FG++CHFAHG EL + G
Sbjct: 212 SNFKTKICERFS-KGNCTFGDRCHFAHGEAELRKSG 246
Score = 94 (38.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 163 KGRHCKKFYTEEGCPYGENCTFLH 186
K + C KF++ GCP+GENC FLH
Sbjct: 38 KSKPCTKFFSTSGCPFGENCHFLH 61
Score = 72 (30.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 59 NSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFRNGT-CPYITNCNFAHSI 112
NS KKS+ Q++ S S +G K+K C KF + + CP+ NC+F H +
Sbjct: 15 NSNGGGYKKSK---QEMESYSTGLGS---KSKPCTKFFSTSGCPFGENCHFLHYV 63
>UNIPROTKB|G3V2P5 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 HGNC:HGNC:1107 ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:AL132986
ProteinModelPortal:G3V2P5 SMR:G3V2P5 Ensembl:ENST00000557086
ArrayExpress:G3V2P5 Bgee:G3V2P5 Uniprot:G3V2P5
Length = 207
Score = 108 (43.1 bits), Expect = 0.00089, P = 0.00089
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 220 GVSNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGIQEL 258
G V S +KT +C +E G C +G+KC FAHGI EL
Sbjct: 112 GGGQVNSSRYKTELCRPFEENGACKYGDKCQFAHGIHEL 150
Score = 101 (40.6 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 45 PSISNSNCQSQTRSNSEQP----PNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGT 99
P++S+ + + + RS SE P +K G Q VNS +KT+LC F NG
Sbjct: 83 PALSSRDSRFRDRSFSEGGERLLPTQKQPGGGQ-VNSSR-------YKTELCRPFEENGA 134
Query: 100 CPYITNCNFAHSIEELR 116
C Y C FAH I ELR
Sbjct: 135 CKYGDKCQFAHGIHELR 151
Score = 94 (38.1 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGG 263
+KT +C + G+CP+G +CHF H +E G
Sbjct: 159 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAG 193
Score = 77 (32.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 159 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 188
Score = 63 (27.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 156 VETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
V + R YK C+ F C YG+ C F H
Sbjct: 116 VNSSR-YKTELCRPFEENGACKYGDKCQFAH 145
>MGI|MGI:107946 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0001570 "vasculogenesis" evidence=IMP] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006417 "regulation of translation" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017091 "AU-rich
element binding" evidence=ISO] [GO:0033077 "T cell differentiation
in thymus" evidence=IGI] [GO:0043488 "regulation of mRNA stability"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:107946 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD ChiTaRS:ZFP36L1
InterPro:IPR007635 Pfam:PF04553 EMBL:M58566 IPI:IPI00138335
PIR:B39590 RefSeq:NP_031590.1 UniGene:Mm.235132
ProteinModelPortal:P23950 SMR:P23950 STRING:P23950
PhosphoSite:P23950 PRIDE:P23950 Ensembl:ENSMUST00000021552
Ensembl:ENSMUST00000165114 GeneID:12192 KEGG:mmu:12192
InParanoid:P23950 NextBio:280591 Bgee:P23950 CleanEx:MM_ZFP36L1
Genevestigator:P23950 GermOnline:ENSMUSG00000021127 Uniprot:P23950
Length = 338
Score = 102 (41.0 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 31/77 (40%), Positives = 40/77 (51%)
Query: 45 PSISNSNCQSQTRSNSEQP----PNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGT 99
PS+S+ + + + RS SE P +K + GS VNS +KT+LC F NG
Sbjct: 77 PSLSSRDSRFRDRSFSEGGERLLPTQK-QPGSGQVNSSR-------YKTELCRPFEENGA 128
Query: 100 CPYITNCNFAHSIEELR 116
C Y C FAH I ELR
Sbjct: 129 CKYGDKCQFAHGIHELR 145
Score = 100 (40.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGG 264
+KT +C + G+CP+G +CHF H +E GG
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAGG 188
Score = 77 (32.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 182
Score = 63 (27.2 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 156 VETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
V + R YK C+ F C YG+ C F H
Sbjct: 110 VNSSR-YKTELCRPFEENGACKYGDKCQFAH 139
>CGD|CAL0004295 [details] [associations]
symbol:orf19.5334 species:5476 "Candida albicans" [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006879 "cellular iron
ion homeostasis" evidence=IEA] [GO:0000956 "nuclear-transcribed
mRNA catabolic process" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 CGD:CAL0004295
GO:GO:0008270 GO:GO:0003676 EMBL:AACQ01000059 EMBL:AACQ01000058
eggNOG:COG5063 RefSeq:XP_717058.1 RefSeq:XP_717137.1
ProteinModelPortal:Q5A5R5 GeneID:3641257 GeneID:3641293
KEGG:cal:CaO19.12794 KEGG:cal:CaO19.5334 Uniprot:Q5A5R5
Length = 203
Score = 105 (42.0 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 82 IGKMFFKTKLCCKF-RNGTCPYITNCNFAHSIEELRRP--PPNWQ 123
I +KT+LC F + G CPY C FAH EL+ PP W+
Sbjct: 134 INTQLYKTELCASFMKTGVCPYANKCQFAHGENELKHVERPPKWR 178
Score = 87 (35.7 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 225 KPSNWKTRICNKWELTGYCPFGNKCHFAHG 254
+P W+++ C W G C +GN+C F HG
Sbjct: 173 RPPKWRSKPCANWTKYGSCRYGNRCCFKHG 202
Score = 70 (29.7 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 109 AHSIEE-LRRPPPNWQEIVAAHEEERASTN-EIPREE--FQIPSIVSTNFAVETQ---RS 161
A+S+ LR W++ A ++++ +P+++ F + +TQ +
Sbjct: 79 ANSVSSPLRSTSSLWEDPPAEQQQQQPQPIFYLPQDDDLFNFEQVHHPQHHTKTQINTQL 138
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDE 188
YK C F CPY C F H E
Sbjct: 139 YKTELCASFMKTGVCPYANKCQFAHGE 165
>RGD|62009 [details] [associations]
symbol:Zfp36l1 "zinc finger protein 36, C3H type-like 1"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=IEA;ISO] [GO:0001570 "vasculogenesis" evidence=IEA;ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0006417 "regulation of
translation" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IMP]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA;ISO]
[GO:0043488 "regulation of mRNA stability" evidence=IEA;ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003729 GO:GO:0017091
GO:GO:0033077 GO:GO:0001570 GO:GO:0006402 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553
EMBL:X52590 EMBL:X86571 IPI:IPI00188182 PIR:S10471
RefSeq:NP_058868.1 UniGene:Rn.6142 ProteinModelPortal:P17431
SMR:P17431 MINT:MINT-1210346 STRING:P17431 PhosphoSite:P17431
GeneID:29344 KEGG:rno:29344 UCSC:RGD:62009 InParanoid:P17431
NextBio:608836 ArrayExpress:P17431 Genevestigator:P17431
GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 100 (40.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGG 264
+KT +C + G+CP+G +CHF H +E GG
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAGG 188
Score = 99 (39.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 45 PSISNSNCQSQTRSNSEQP----PNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGT 99
P++S+ + + + RS SE P +K + GS VNS +KT+LC F NG
Sbjct: 77 PTLSSRDSRFRDRSFSEGGERLLPTQK-QPGSGQVNSSR-------YKTELCRPFEENGA 128
Query: 100 CPYITNCNFAHSIEELR 116
C Y C FAH I ELR
Sbjct: 129 CKYGDKCQFAHGIHELR 145
Score = 77 (32.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 182
Score = 63 (27.2 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 156 VETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
V + R YK C+ F C YG+ C F H
Sbjct: 110 VNSSR-YKTELCRPFEENGACKYGDKCQFAH 139
>UNIPROTKB|P17431 [details] [associations]
symbol:Zfp36l1 "Zinc finger protein 36, C3H1 type-like 1"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:62009 GO:GO:0005829 GO:GO:0005634 GO:GO:0006417
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0017091 GO:GO:0033077 GO:GO:0001570 GO:GO:0006402
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CTD:677
HOGENOM:HOG000233479 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 EMBL:X52590 EMBL:X86571
IPI:IPI00188182 PIR:S10471 RefSeq:NP_058868.1 UniGene:Rn.6142
ProteinModelPortal:P17431 SMR:P17431 MINT:MINT-1210346
STRING:P17431 PhosphoSite:P17431 GeneID:29344 KEGG:rno:29344
UCSC:RGD:62009 InParanoid:P17431 NextBio:608836 ArrayExpress:P17431
Genevestigator:P17431 GermOnline:ENSRNOG00000030024 Uniprot:P17431
Length = 338
Score = 100 (40.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGG 264
+KT +C + G+CP+G +CHF H +E GG
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAGG 188
Score = 99 (39.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 45 PSISNSNCQSQTRSNSEQP----PNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGT 99
P++S+ + + + RS SE P +K + GS VNS +KT+LC F NG
Sbjct: 77 PTLSSRDSRFRDRSFSEGGERLLPTQK-QPGSGQVNSSR-------YKTELCRPFEENGA 128
Query: 100 CPYITNCNFAHSIEELR 116
C Y C FAH I ELR
Sbjct: 129 CKYGDKCQFAHGIHELR 145
Score = 77 (32.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 182
Score = 63 (27.2 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 156 VETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
V + R YK C+ F C YG+ C F H
Sbjct: 110 VNSSR-YKTELCRPFEENGACKYGDKCQFAH 139
>UNIPROTKB|A7MB98 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GeneTree:ENSGT00530000063262 CTD:677 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OMA:HSYSFAG OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:DAAA02029486 EMBL:BC151440 IPI:IPI00709262
RefSeq:NP_001094704.1 UniGene:Bt.61758 SMR:A7MB98 STRING:A7MB98
Ensembl:ENSBTAT00000035742 GeneID:614773 KEGG:bta:614773
InParanoid:A7MB98 NextBio:20899277 Uniprot:A7MB98
Length = 338
Score = 104 (41.7 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 31/78 (39%), Positives = 40/78 (51%)
Query: 45 PSISNSNCQSQTRSNSEQ-----PPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NG 98
P++S+ + + + RS SE PP K+ GS VNS +KT+LC F NG
Sbjct: 77 PALSSRDSRFRDRSFSEGGERLLPPQKQP--GSGQVNSSR-------YKTELCRPFEENG 127
Query: 99 TCPYITNCNFAHSIEELR 116
C Y C FAH I ELR
Sbjct: 128 ACKYGDKCQFAHGIHELR 145
Score = 94 (38.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGG 263
+KT +C + G+CP+G +CHF H +E G
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAG 187
Score = 77 (32.2 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 182
Score = 63 (27.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 156 VETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
V + R YK C+ F C YG+ C F H
Sbjct: 110 VNSSR-YKTELCRPFEENGACKYGDKCQFAH 139
>UNIPROTKB|Q07352 [details] [associations]
symbol:ZFP36L1 "Zinc finger protein 36, C3H1 type-like 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0033077 "T cell differentiation in
thymus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0043488 "regulation of
mRNA stability" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005829 GO:GO:0005634 GO:GO:0010467 GO:GO:0016071
GO:GO:0006417 PDB:1W0V PDB:1W0W PDBsum:1W0V PDBsum:1W0W
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003729
GO:GO:0003700 GO:GO:0017091 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063 CleanEx:HS_BRF1
EMBL:X79066 EMBL:X79067 EMBL:X99404 EMBL:BT019468 EMBL:BC018340
IPI:IPI00016635 PIR:S34854 RefSeq:NP_001231627.1
RefSeq:NP_001231630.1 RefSeq:NP_004917.2 UniGene:Hs.85155
ProteinModelPortal:Q07352 SMR:Q07352 IntAct:Q07352
MINT:MINT-1375566 STRING:Q07352 PhosphoSite:Q07352 DMDM:1351254
PaxDb:Q07352 PeptideAtlas:Q07352 PRIDE:Q07352 DNASU:677
Ensembl:ENST00000336440 Ensembl:ENST00000439696 GeneID:677
KEGG:hsa:677 UCSC:uc001xkh.2 CTD:677 GeneCards:GC14M069254
HGNC:HGNC:1107 HPA:HPA001301 MIM:601064 neXtProt:NX_Q07352
PharmGKB:PA35027 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InParanoid:Q07352 OMA:HSYSFAG OrthoDB:EOG480HXD PhylomeDB:Q07352
ChiTaRS:ZFP36L1 EvolutionaryTrace:Q07352 GenomeRNAi:677
NextBio:2790 ArrayExpress:Q07352 Bgee:Q07352 CleanEx:HS_ZFP36L1
Genevestigator:Q07352 GermOnline:ENSG00000185650 InterPro:IPR007635
Pfam:PF04553 Uniprot:Q07352
Length = 338
Score = 101 (40.6 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 45 PSISNSNCQSQTRSNSEQP----PNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGT 99
P++S+ + + + RS SE P +K G Q VNS +KT+LC F NG
Sbjct: 77 PALSSRDSRFRDRSFSEGGERLLPTQKQPGGGQ-VNSSR-------YKTELCRPFEENGA 128
Query: 100 CPYITNCNFAHSIEELR 116
C Y C FAH I ELR
Sbjct: 129 CKYGDKCQFAHGIHELR 145
Score = 94 (38.1 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGG 263
+KT +C + G+CP+G +CHF H +E G
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAG 187
Score = 77 (32.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 182
Score = 63 (27.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 156 VETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
V + R YK C+ F C YG+ C F H
Sbjct: 110 VNSSR-YKTELCRPFEENGACKYGDKCQFAH 139
>UNIPROTKB|E2R2W0 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043488 "regulation of mRNA stability"
evidence=IEA] [GO:0033077 "T cell differentiation in thymus"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:AAEX03005803
RefSeq:XP_853070.1 Ensembl:ENSCAFT00000026141 GeneID:490748
KEGG:cfa:490748 NextBio:20863709 Uniprot:E2R2W0
Length = 338
Score = 99 (39.9 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 45 PSISNSNCQSQTRSNSEQP----PNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGT 99
P++S+ + + + RS SE P +K + GS VNS +KT+LC F NG
Sbjct: 77 PALSSRDSRFRDRSFSEGGERLLPTQK-QPGSGQVNSSR-------YKTELCRPFEENGA 128
Query: 100 CPYITNCNFAHSIEELR 116
C Y C FAH I ELR
Sbjct: 129 CKYGDKCQFAHGIHELR 145
Score = 94 (38.1 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGG 263
+KT +C + G+CP+G +CHF H +E G
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAG 187
Score = 77 (32.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 182
Score = 63 (27.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 156 VETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
V + R YK C+ F C YG+ C F H
Sbjct: 110 VNSSR-YKTELCRPFEENGACKYGDKCQFAH 139
>UNIPROTKB|I3LB77 [details] [associations]
symbol:ZFP36L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0008270 GO:GO:0003676 GO:GO:0033077 GO:GO:0001570
GO:GO:0043488 GO:GO:0000288 GeneTree:ENSGT00530000063262 CTD:677
OMA:HSYSFAG InterPro:IPR007635 Pfam:PF04553 EMBL:CT956041
RefSeq:XP_003356787.1 Ensembl:ENSSSCT00000022695 GeneID:100624279
KEGG:ssc:100624279 Uniprot:I3LB77
Length = 338
Score = 99 (39.9 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 45 PSISNSNCQSQTRSNSEQP----PNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGT 99
P++S+ + + + RS SE P +K + GS VNS +KT+LC F NG
Sbjct: 77 PALSSRDSRFRDRSFSEGGERLLPTQK-QPGSGQVNSSR-------YKTELCRPFEENGA 128
Query: 100 CPYITNCNFAHSIEELR 116
C Y C FAH I ELR
Sbjct: 129 CKYGDKCQFAHGIHELR 145
Score = 94 (38.1 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGG 263
+KT +C + G+CP+G +CHF H +E G
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRALAG 187
Score = 77 (32.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 153 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 182
Score = 63 (27.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 156 VETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
V + R YK C+ F C YG+ C F H
Sbjct: 110 VNSSR-YKTELCRPFEENGACKYGDKCQFAH 139
>ZFIN|ZDB-GENE-030131-2391 [details] [associations]
symbol:zfp36l1b "zinc finger protein 36, C3H
type-like 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-2391 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 HOGENOM:HOG000233479
HOVERGEN:HBG008483 InterPro:IPR007635 Pfam:PF04553 EMBL:BX649319
EMBL:BC063991 IPI:IPI00481341 RefSeq:NP_955943.1 UniGene:Dr.78307
SMR:Q6P3H0 Ensembl:ENSDART00000014168 GeneID:323671 KEGG:dre:323671
CTD:323671 InParanoid:Q6P3H0 OMA:SSITCIS NextBio:20808378
Uniprot:Q6P3H0
Length = 348
Score = 98 (39.6 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 25/75 (33%), Positives = 32/75 (42%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAAPSDS-KLVGVPS 287
+KT +C + GYCP+G +CHF H +E R G + S N S G PS
Sbjct: 176 YKTELCRTFHSIGYCPYGPRCHFIHNAEE--RRGPPPLSSFNKMERPRLHHSFSFAGFPS 233
Query: 288 KTPVDTVVASVTSVP 302
SVT P
Sbjct: 234 SGGSQDSPTSVTPPP 248
Score = 95 (38.5 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 23/50 (46%), Positives = 27/50 (54%)
Query: 68 SRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGTCPYITNCNFAHSIEELR 116
S NG+ VNS +KT+LC F NGTC Y C FAH + ELR
Sbjct: 126 SANGNGQVNSSR-------YKTELCRPFEENGTCKYGDKCQFAHGMHELR 168
Score = 73 (30.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F++ CPYG C F+H+ + +
Sbjct: 176 YKTELCRTFHSIGYCPYGPRCHFIHNAEER 205
Score = 66 (28.3 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 153 NFAVETQRSYKGRHCKKFYTEEGCPYGENCTF---LHDEQSKNR 193
N V + R YK C+ F C YG+ C F +H+ +S NR
Sbjct: 130 NGQVNSSR-YKTELCRPFEENGTCKYGDKCQFAHGMHELRSLNR 172
>UNIPROTKB|Q805B4 [details] [associations]
symbol:zfp36l2-B "Zinc finger protein 36, C3H1 type-like
2-B" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0039020 "pronephric nephron tubule
development" evidence=IMP] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=IMP] [GO:0072080 "nephron tubule development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0039020 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:AF061982 UniGene:Xl.476
EMBL:AB097482 EMBL:BC084221 RefSeq:NP_001081886.1
ProteinModelPortal:Q805B4 SMR:Q805B4 GeneID:398103 KEGG:xla:398103
CTD:398103 Xenbase:XB-GENE-971016 Uniprot:Q805B4
Length = 364
Score = 97 (39.2 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDS---SAAPS---DSKL 282
+KT +C + G+CP+G +CHF H +E + G + + S S P+ DS L
Sbjct: 172 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRQAPGAGERPKLHHSLSFSGFPNHSLDSPL 231
Query: 283 VGVP-SKTP 290
+ P S+TP
Sbjct: 232 LESPTSRTP 240
Score = 91 (37.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 32/116 (27%), Positives = 50/116 (43%)
Query: 5 RDSSENVVHIIVGNGAPEHWIPNPNDSSVWATEDDYPDDPPSISNSNCQSQTRSNSEQPP 64
R S+ N+ + G+ + PN N++ + +D ++ N + + RS SE
Sbjct: 54 RHSATNL-QALSGSTNLAKFCPNNNNNPL---KDPAVSSTALLNREN-KFRDRSFSENGE 108
Query: 65 NKKSRNGSQDVNSKSKA---IGKMFFKTKLCCKFR-NGTCPYITNCNFAHSIEELR 116
+ Q + KA + +KT+LC F NG C Y C FAH ELR
Sbjct: 109 RSQHLLHLQQQQQQQKAGAQVNSTRYKTELCRPFEENGACKYGEKCQFAHGFHELR 164
Score = 78 (32.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSKNR 193
YK C+ F+T CPYG C F+H+ + + +
Sbjct: 172 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRQ 203
Score = 65 (27.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLH 186
YK C+ F C YGE C F H
Sbjct: 134 YKTELCRPFEENGACKYGEKCQFAH 158
>WB|WBGene00013319 [details] [associations]
symbol:ccch-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0009792 EMBL:Z99281 GO:GO:0008270 GO:GO:0000003
GO:GO:0003676 eggNOG:COG5063 GeneTree:ENSGT00530000063262
PIR:T27239 RefSeq:NP_502805.1 ProteinModelPortal:O18251 SMR:O18251
STRING:O18251 EnsemblMetazoa:Y57G11C.25 GeneID:178412
KEGG:cel:CELE_Y57G11C.25 UCSC:Y57G11C.25 CTD:178412
WormBase:Y57G11C.25 HOGENOM:HOG000114059 InParanoid:O18251
NextBio:901036 Uniprot:O18251
Length = 199
Score = 92 (37.4 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 218 NIGVSNVKPSNWKTRICNKWELTGYCPFGNKCHFAH 253
N+G++N K +KT +C+ + TG+C +G KC F H
Sbjct: 104 NLGINNPK---YKTVLCDNFSTTGHCKYGTKCQFIH 136
Score = 83 (34.3 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 26/90 (28%), Positives = 38/90 (42%)
Query: 31 SSVWATEDDYPDDPPSISNSNCQSQT-RSNSEQPPNKKSRNGSQDVNSKSKAIGKM--FF 87
++ W ++ P P N SQ + +Q S DV + + + F
Sbjct: 12 TAAWTSQQ--PRSPRMFDQENGFSQNFQPFMQQNKTVNPCTISDDVREEMMRLRRRENAF 69
Query: 88 KTKLCCKFR-NGTCPYITNCNFAHSIEELR 116
KT LC F+ C Y C FAHS+EEL+
Sbjct: 70 KTALCKTFQLTKACSYGEQCKFAHSVEELQ 99
Score = 70 (29.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 159 QRSYKGRHCKKFYTEEGCPYGENCTFLH--DEQSKNRESVAIS 199
+ ++K CK F + C YGE C F H +E +++ I+
Sbjct: 66 ENAFKTALCKTFQLTKACSYGEQCKFAHSVEELQLKHQNLGIN 108
>UNIPROTKB|A4IIN5 [details] [associations]
symbol:zfp36l2 "Zinc finger protein 36, C3H1 type-like 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043488
"regulation of mRNA stability" evidence=ISS] [GO:0048793
"pronephros development" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003723 GO:GO:0043488 GO:GO:0000288 eggNOG:COG5063
GO:GO:0048793 HOGENOM:HOG000233479 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 CTD:678 EMBL:BC136091
RefSeq:NP_001096423.1 UniGene:Str.6563 STRING:A4IIN5
GeneID:100125029 KEGG:xtr:100125029 Xenbase:XB-GENE-971012
Uniprot:A4IIN5
Length = 333
Score = 92 (37.4 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 38/121 (31%), Positives = 57/121 (47%)
Query: 5 RDSSENVVHIIVGNGAPEHWIPNPN---DSSVWAT-----EDDYPDDPPSISNSNCQSQT 56
R S+ N+ + GN P + PN N + + +T E+ + D S S + +SQ
Sbjct: 25 RHSASNL-QALSGNTNPAKFCPNNNQLKEPAAGSTALLNRENKFRDR--SFSENGERSQH 81
Query: 57 RSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGTCPYITNCNFAHSIEEL 115
+ +Q +K+ G+Q VNS +KT+LC F +G C Y C FAH EL
Sbjct: 82 LLHLQQQQQQKA--GAQ-VNSTR-------YKTELCRPFEESGACKYGEKCQFAHGFHEL 131
Query: 116 R 116
R
Sbjct: 132 R 132
Score = 91 (37.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDS---SAAPS---DSKL 282
+KT +C + G+CP+G +CH H +E + G + + S S P+ DS L
Sbjct: 140 YKTELCRTFHTIGFCPYGPRCHLIHNAEERRQAPGAGERPKLHHSLSFSGFPNHSLDSPL 199
Query: 283 VGVP-SKTP 290
+ P S+TP
Sbjct: 200 LESPTSRTP 208
Score = 72 (30.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSKNR 193
YK C+ F+T CPYG C +H+ + + +
Sbjct: 140 YKTELCRTFHTIGFCPYGPRCHLIHNAEERRQ 171
Score = 65 (27.9 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLH 186
YK C+ F C YGE C F H
Sbjct: 102 YKTELCRPFEESGACKYGEKCQFAH 126
>UNIPROTKB|Q6S9E0 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9940 "Ovis aries"
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006402 "mRNA catabolic process" evidence=ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0010494
"cytoplasmic stress granule" evidence=ISS] [GO:0017091 "AU-rich
element binding" evidence=ISS] [GO:0032680 "regulation of tumor
necrosis factor production" evidence=ISS] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=ISS] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=ISS] [GO:0071889 "14-3-3 protein binding" evidence=ISS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 GO:GO:0006950 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0017091 GO:GO:0006402 GO:GO:0071889
GO:GO:0010494 GO:GO:0060213 GO:GO:0070935 GO:GO:0032680
HOVERGEN:HBG008483 CTD:7538 EMBL:AY462109 RefSeq:NP_001009765.1
UniGene:Oar.1075 ProteinModelPortal:Q6S9E0 SMR:Q6S9E0 GeneID:443283
Uniprot:Q6S9E0
Length = 325
Score = 95 (38.5 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT +C+K+ L G CP+G++CHF H E
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHNPSE 168
Score = 87 (35.7 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 57 RSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKF-RNGTCPYITNCNFAHSIEEL 115
R +SE P+ S + +S+ +KT+LC F +G C Y C FAH + EL
Sbjct: 80 RPSSELSPSPTSPTATPTTSSR--------YKTELCRTFSESGRCRYGAKCQFAHGLGEL 131
Query: 116 RRP 118
R+P
Sbjct: 132 RQP 134
Score = 83 (34.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHD 187
YK C KFY + CPYG C F+H+
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHN 165
Score = 70 (29.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 140 PREEFQI-PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PR ++ PS S T YK C+ F +E G C YG C F H
Sbjct: 79 PRPSSELSPSPTSPTATPTTSSRYKTELCRTF-SESGRCRYGAKCQFAH 126
>WB|WBGene00009539 [details] [associations]
symbol:F38C2.7 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z82267
HOGENOM:HOG000114669 PIR:T21963 RefSeq:NP_502930.1
UniGene:Cel.12984 ProteinModelPortal:O45493 SMR:O45493
IntAct:O45493 STRING:O45493 EnsemblMetazoa:F38C2.7 GeneID:185463
KEGG:cel:CELE_F38C2.7 UCSC:F38C2.7 CTD:185463 WormBase:F38C2.7
InParanoid:O45493 NextBio:928376 Uniprot:O45493
Length = 203
Score = 91 (37.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 49 NSNCQSQTRSNSEQPPNKKSRNGSQDVNSKSKAIGKM--FFKTKLCCKFRNGT-CPYITN 105
N N Q +++ N+ +++ + K++ K FKT LC R G C Y
Sbjct: 49 NQNETEQKLFSNQSLANRDPCTIPDELHQEMKSLKKKEEAFKTSLCGFHRRGQKCAYGEK 108
Query: 106 CNFAHSIEELRRP 118
C FAHS+ ELR P
Sbjct: 109 CKFAHSVHELRFP 121
Score = 83 (34.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 228 NWKTRICNKWELTGYCPFGNKCHFAH 253
N+KT +CN + TG+C +G +C F H
Sbjct: 129 NYKTVLCNNFSTTGHCKYGIRCQFIH 154
Score = 69 (29.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 17/48 (35%), Positives = 21/48 (43%)
Query: 160 RSYKGRHCKKFYTEEGCPYGENCTFLH-------DEQSKNRESVAISL 200
R+YK C F T C YG C F+H QS E++ I L
Sbjct: 128 RNYKTVLCNNFSTTGHCKYGIRCQFIHRSMNSTSSNQSNKMENITIDL 175
>SGD|S000002558 [details] [associations]
symbol:CTH1 "Member of the CCCH zinc finger family"
species:4932 "Saccharomyces cerevisiae" [GO:0006879 "cellular iron
ion homeostasis" evidence=IGI] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IC] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 SGD:S000002558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003729
EMBL:BK006938 GO:GO:0006879 GO:GO:0000956 eggNOG:COG5063
EMBL:L42133 EMBL:Z50046 EMBL:AY557690 PIR:S57977 RefSeq:NP_010435.1
ProteinModelPortal:P47976 SMR:P47976 DIP:DIP-1784N IntAct:P47976
MINT:MINT-385004 STRING:P47976 EnsemblFungi:YDR151C GeneID:851729
KEGG:sce:YDR151C CYGD:YDR151c GeneTree:ENSGT00530000063262
HOGENOM:HOG000001038 OMA:EIEEYYI OrthoDB:EOG4W3WXK NextBio:969448
Genevestigator:P47976 GermOnline:YDR151C Uniprot:P47976
Length = 325
Score = 99 (39.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 225 KPSNWKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAAPSDSKL 282
K +N++T+ C W GYCP+G +C F HG + + + D++ P + L
Sbjct: 239 KSNNYRTKPCINWSKLGYCPYGKRCCFKHGDDKDVEIYQNANDGRSKDTALTPLPTSL 296
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 82 IGKMFFKTKLCCKFR-NGTCPYITNCNFAHSIEELR 116
+ K +KT+LC F G C Y C FAH + EL+
Sbjct: 200 VNKTLYKTELCESFTIKGYCKYGNKCQFAHGLNELK 235
Score = 60 (26.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 141 REEFQIPSIVSTNFAVETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
R Q+P +V+ YK C+ F + C YG C F H
Sbjct: 191 RAPLQLPQLVNKTL-------YKTELCESFTIKGYCKYGNKCQFAH 229
>UNIPROTKB|Q7ZXW9 [details] [associations]
symbol:zfp36l2-A "Zinc finger protein 36, C3H1 type-like
2-A" species:8355 "Xenopus laevis" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0043488 "regulation of mRNA
stability" evidence=ISS] [GO:0048793 "pronephros development"
evidence=ISS] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 HSSP:P22893 GO:GO:0048793 HOVERGEN:HBG008483
InterPro:IPR007635 Pfam:PF04553 EMBL:BC044086 EMBL:AF061982
RefSeq:NP_001080610.1 UniGene:Xl.23743 UniGene:Xl.476
ProteinModelPortal:Q7ZXW9 SMR:Q7ZXW9 GeneID:380302 KEGG:xla:380302
CTD:380302 Xenbase:XB-GENE-6256550 Uniprot:Q7ZXW9
Length = 363
Score = 92 (37.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGG 263
+KT +C + G+CP+G +CHF H +E + G
Sbjct: 170 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRQAPG 204
Score = 90 (36.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 30/114 (26%), Positives = 50/114 (43%)
Query: 5 RDSSENVVHIIVGNGAPEHWIPNPNDSSVWATEDDYPDDPPSISNSNCQSQTRSNSEQPP 64
R S+ N+ + G+ P + N N++ + ++ ++ N + + RS SE
Sbjct: 54 RHSASNL-QALSGSTNPAKFCHNNNNNQL----NESAASSTALLNRENKFRDRSFSENGE 108
Query: 65 NKKSRNGSQDVNSKSKA-IGKMFFKTKLCCKFR-NGTCPYITNCNFAHSIEELR 116
+ Q K+ A + +KT+LC F +G C Y C FAH ELR
Sbjct: 109 RSQHLLHLQQQQQKAGAQVNSTRYKTELCRPFEESGACKYGEKCQFAHGFHELR 162
Score = 78 (32.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSKNR 193
YK C+ F+T CPYG C F+H+ + + +
Sbjct: 170 YKTELCRTFHTIGFCPYGPRCHFIHNAEERRQ 201
Score = 65 (27.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLH 186
YK C+ F C YGE C F H
Sbjct: 132 YKTELCRPFEESGACKYGEKCQFAH 156
>UNIPROTKB|F1LVT2 [details] [associations]
symbol:F1LVT2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000289 "nuclear-transcribed mRNA poly(A)
tail shortening" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005737 GO:GO:0008270 GO:GO:0017091 GO:GO:0000289
GeneTree:ENSGT00530000063262 IPI:IPI00362311
Ensembl:ENSRNOT00000050601 Uniprot:F1LVT2
Length = 490
Score = 97 (39.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 27/84 (32%), Positives = 39/84 (46%)
Query: 35 ATEDDYPDDPPSISNSNCQSQTR-SNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCC 93
A + P +P S ++ + + N E +K + Q ++S S +KT+LC
Sbjct: 94 AVSCEAPQEP---SGASAELRVHPGNGEHSLQQKPKQ--QKMSSSSSQATSERYKTELCR 148
Query: 94 KFR-NGTCPYITNCNFAHSIEELR 116
F NGTC Y C FAH ELR
Sbjct: 149 PFEENGTCRYGNKCQFAHGYHELR 172
Score = 88 (36.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE-LHRFGGGLVESENN 271
+KT C + GYCP+G++CHF H E L G + E ++
Sbjct: 180 YKTEPCRTFHSIGYCPYGSRCHFIHNQPEQLPMLPGSVSEEPSS 223
Score = 74 (31.1 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDE 188
YK C+ F++ CPYG C F+H++
Sbjct: 180 YKTEPCRTFHSIGYCPYGSRCHFIHNQ 206
>ZFIN|ZDB-GENE-990806-20 [details] [associations]
symbol:cth1 "cth1" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 ZFIN:ZDB-GENE-990806-20 GO:GO:0008270
GO:GO:0003676 HSSP:P22893 GeneTree:ENSGT00530000063262
EMBL:AL954709 EMBL:BC107984 EMBL:AJ249490 IPI:IPI00509714
RefSeq:NP_571014.1 UniGene:Dr.621 SMR:Q9PU62 STRING:Q9PU62
Ensembl:ENSDART00000101601 GeneID:30114 KEGG:dre:30114 CTD:30114
HOGENOM:HOG000153347 HOVERGEN:HBG078993 InParanoid:Q9PU62 KO:K13056
OMA:FTFSSQH NextBio:20806593 Uniprot:Q9PU62
Length = 319
Score = 85 (35.0 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELRRP 118
+KT+LC ++ GTC Y C FAH + +L P
Sbjct: 60 YKTELCSRYAETGTCKYAERCQFAHGLHDLHVP 92
Score = 82 (33.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT +C + GYC +G +C F H ++E
Sbjct: 98 YKTELCRTYHTAGYCVYGTRCLFVHNLKE 126
Score = 73 (30.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 229 WKTR--ICNKWELTGYCPFGNKCHFAHGI 255
WK R +C + G+C +G +C F HG+
Sbjct: 183 WKPRGALCRTFSAFGFCLYGTRCRFQHGL 211
Score = 69 (29.3 bits), Expect = 7.9e-05, Sum P(3) = 7.9e-05
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 87 FKTKLCCKFRN-GTCPYITNCNFAHSIEELRRP 118
+KT+LC + G C Y T C F H+++E +RP
Sbjct: 98 YKTELCRTYHTAGYCVYGTRCLFVHNLKE-QRP 129
Score = 58 (25.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 167 CKKFYTEEGCPYGENCTFLHDE 188
C+ F CP+G C FLH E
Sbjct: 139 CRTFRAFGVCPFGNRCHFLHVE 160
>ZFIN|ZDB-GENE-030131-9860 [details] [associations]
symbol:zfp36l1a "zinc finger protein 36, C3H
type-like 1a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-9860 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 HOGENOM:HOG000233479 HOVERGEN:HBG008483
OrthoDB:EOG480HXD InterPro:IPR007635 Pfam:PF04553 EMBL:BC124505
IPI:IPI00482112 RefSeq:NP_001070621.1 UniGene:Dr.105582
UniGene:Dr.107563 UniGene:Dr.31482 UniGene:Dr.76498
ProteinModelPortal:Q08BY3 SMR:Q08BY3 GeneID:561280 KEGG:dre:561280
CTD:561280 InParanoid:Q08BY3 NextBio:20883849 Uniprot:Q08BY3
Length = 374
Score = 91 (37.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT +C + G+CP+G +CHF H +E
Sbjct: 183 YKTELCRTFHTIGFCPYGPRCHFIHNAEE 211
Score = 91 (37.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 49 NSNCQSQTRSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGTCPYITNCN 107
+SN +++ R S + + + +KT+LC F NG C Y C
Sbjct: 107 SSNKENRLRDRSFSETGDRLLQKCSGPGGPNSQVNSSRYKTELCRPFEENGACKYGDKCQ 166
Query: 108 FAHSIEELR 116
FAH I ELR
Sbjct: 167 FAHGIHELR 175
Score = 77 (32.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ + +
Sbjct: 183 YKTELCRTFHTIGFCPYGPRCHFIHNAEER 212
Score = 66 (28.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 153 NFAVETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
N V + R YK C+ F C YG+ C F H
Sbjct: 137 NSQVNSSR-YKTELCRPFEENGACKYGDKCQFAH 169
>WB|WBGene00013796 [details] [associations]
symbol:Y116A8C.19 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
HSSP:P22893 eggNOG:COG5063 GeneTree:ENSGT00530000063262
EMBL:AL117204 HOGENOM:HOG000114669 PIR:T31491 RefSeq:NP_503019.1
ProteinModelPortal:Q9U2V2 SMR:Q9U2V2 STRING:Q9U2V2
EnsemblMetazoa:Y116A8C.19 GeneID:178477 KEGG:cel:CELE_Y116A8C.19
UCSC:Y116A8C.19 CTD:178477 WormBase:Y116A8C.19 InParanoid:Q9U2V2
NextBio:901288 Uniprot:Q9U2V2
Length = 196
Score = 89 (36.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 228 NWKTRICNKWELTGYCPFGNKCHFAH 253
N+KT +C+K+ TGYC +G +C F H
Sbjct: 124 NYKTVLCDKFSTTGYCKYGARCQFIH 149
Score = 83 (34.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 72 SQDVNSKSKAIGKM--FFKTKLCCKFRNGT-CPYITNCNFAHSIEELR 116
S D++ + K + K FKT LC R G C Y C FAHS+ ELR
Sbjct: 67 SDDLHDEMKRLKKKEEAFKTALCGFQRRGQKCIYGEQCKFAHSVHELR 114
Score = 78 (32.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 155 AVETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
A +T R+YK C KF T C YG C F+H
Sbjct: 118 AKKTHRNYKTVLCDKFSTTGYCKYGARCQFIH 149
>WB|WBGene00003228 [details] [associations]
symbol:mex-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0030010 "establishment of cell polarity" evidence=IMP]
[GO:0001704 "formation of primary germ layer" evidence=IMP]
[GO:0009880 "embryonic pattern specification" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0003674 "molecular_function" evidence=NAS]
[GO:0003723 "RNA binding" evidence=ISS] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0001708
GO:GO:0009792 GO:GO:0002009 GO:GO:0008270 GO:GO:0000003
GO:GO:0003723 GO:GO:0009880 GO:GO:0030010 EMBL:AL023828 HSSP:P22893
GO:GO:0043186 GeneTree:ENSGT00530000063262 GO:GO:0001704 CTD:174836
EMBL:U81043 EMBL:Z66516 PIR:T26124 RefSeq:NP_001254325.1
UniGene:Cel.7263 ProteinModelPortal:G5ECB9 SMR:G5ECB9 IntAct:G5ECB9
EnsemblMetazoa:W03C9.7a.1 EnsemblMetazoa:W03C9.7a.2
EnsemblMetazoa:W03C9.7a.3 GeneID:174836 KEGG:cel:CELE_W03C9.7
WormBase:W03C9.7a OMA:HVERNQT NextBio:885712 Uniprot:G5ECB9
Length = 494
Score = 99 (39.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 29/76 (38%), Positives = 36/76 (47%)
Query: 46 SISNSNCQSQTRSNSEQ--PPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKF-RNGTCPY 102
++ S+ SQ R +S Q R Q K +A FKT LC F R+G+CPY
Sbjct: 101 NMHRSSSSSQYRRHSAQWETMTDDERESVQRQKRKEEA-----FKTALCDAFKRSGSCPY 155
Query: 103 ITNCNFAHSIEELRRP 118
C FAH ELR P
Sbjct: 156 GEACRFAHGENELRMP 171
Score = 84 (34.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE---LHRFGGGLVESE----NNDSSAAPSDS 280
+KT++C+K+ G CP+G +C F H +++ L + L E E +D P +S
Sbjct: 182 YKTQLCDKFSNFGQCPYGPRCQFIHKLKKGLPLSEYNRALQEGEISPARDDEITNPDES 240
Score = 70 (29.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLH 186
YK + C KF CPYG C F+H
Sbjct: 182 YKTQLCDKFSNFGQCPYGPRCQFIH 206
>POMBASE|SPBC1718.07c [details] [associations]
symbol:zfs1 "CCCH tandem zinc finger protein, human
Tristetraprolin homolog Zfs1, involved in mRNA catabolism"
species:4896 "Schizosaccharomyces pombe" [GO:0000750
"pheromone-dependent signal transduction involved in conjugation
with cellular fusion" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic process"
evidence=IMP] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=IMP] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IGI] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0031030 "negative regulation of septation
initiation signaling cascade" evidence=IGI] [GO:0031137 "regulation
of conjugation with cellular fusion" evidence=IGI] [GO:0035925
"mRNA 3'-UTR AU-rich region binding" evidence=IDA] [GO:0045839
"negative regulation of mitosis" evidence=IMP] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 PomBase:SPBC1718.07c
GO:GO:0005829 GO:GO:0005634 GO:GO:0051301 GO:GO:0007094
GO:GO:0031030 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GenomeReviews:CU329671_GR GO:GO:0000750 GO:GO:0006402 GO:GO:0031137
eggNOG:COG5063 GO:GO:0010972 OrthoDB:EOG4W3WXK GO:GO:0035925
EMBL:D49913 PIR:T50335 RefSeq:NP_596453.1 ProteinModelPortal:P47979
SMR:P47979 MINT:MINT-4690404 STRING:P47979
EnsemblFungi:SPBC1718.07c.1 GeneID:2539958 KEGG:spo:SPBC1718.07c
NextBio:20801101 Uniprot:P47979
Length = 404
Score = 95 (38.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 30/95 (31%), Positives = 46/95 (48%)
Query: 27 NPNDSSVWATEDDYPDDP-PSISNSNCQSQTRSNSEQPPNKKSRNGSQDVNSKSKAIGKM 85
+P+ +S TE P P PS + Q + ++ P S NG N K +
Sbjct: 275 SPSGNSP-LTEASKPFVPQPSAAGDF--RQAKGSASHPHGSGSSNGVAP-NGK-----RA 325
Query: 86 FFKTKLCCKFR-NGTCPYITNCNFAHSIEELRRPP 119
+KT+ C ++ +GTC Y + C FAH +EL+ PP
Sbjct: 326 LYKTEPCKNWQISGTCRYGSKCQFAHGNQELKEPP 360
Score = 86 (35.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSKNRES 195
YK C+ F CPYG C FLHDE + + +
Sbjct: 365 YKSERCRSFMMYGYCPYGLRCCFLHDESNAQKSA 398
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAH 253
+K+ C + + GYCP+G +C F H
Sbjct: 365 YKSERCRSFMMYGYCPYGLRCCFLH 389
>UNIPROTKB|F1MV20 [details] [associations]
symbol:F1MV20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:DAAA02030674 IPI:IPI00695139
Ensembl:ENSBTAT00000004621 Uniprot:F1MV20
Length = 438
Score = 94 (38.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAAPSDSKLVGVPSK 288
+KT +C + G+CP+G +CHF H E G + SA D+ +G P +
Sbjct: 188 YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRTFSAR--DALHLGFP-R 244
Query: 289 TPVDTVVASVTSVPHADVYHMGVPSQRSSIVVQRPGQRS 327
P + S++ +H S +++ P R+
Sbjct: 245 EPRPKLHHSLSFSGFPSGHHQPPGGLESPLLLDSPTSRT 283
Score = 87 (35.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 46 SISNSNCQSQTRSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGTCPYIT 104
S S + +SQ + +Q +K GSQ +NS +KT+LC F +GTC Y
Sbjct: 119 SFSENGERSQHLLHLQQ--QQKGGGGSQ-INSTR-------YKTELCRPFEESGTCKYGE 168
Query: 105 NCNFAHSIEELR 116
C FAH ELR
Sbjct: 169 KCQFAHGFHELR 180
Score = 75 (31.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ +
Sbjct: 188 YKTELCRTFHTIGFCPYGPRCHFIHNADER 217
Score = 63 (27.2 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLH 186
YK C+ F C YGE C F H
Sbjct: 150 YKTELCRPFEESGTCKYGEKCQFAH 174
>UNIPROTKB|F1S5I0 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043488 "regulation of mRNA stability" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 GO:GO:0005737 GO:GO:0008270
GO:GO:0003676 GO:GO:0043488 GO:GO:0000288
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
OMA:PLAIQTH EMBL:CU694628 RefSeq:XP_003125238.1
Ensembl:ENSSSCT00000009263 GeneID:100513591 KEGG:ssc:100513591
ArrayExpress:F1S5I0 Uniprot:F1S5I0
Length = 493
Score = 94 (38.1 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAAPSDSKLVGVPSK 288
+KT +C + G+CP+G +CHF H E G + SA D+ +G P +
Sbjct: 192 YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRTFSAR--DALHLGFP-R 248
Query: 289 TPVDTVVASVTSVPHADVYHMGVPSQRSSIVVQRPGQRS 327
P + S++ +H S +++ P R+
Sbjct: 249 EPRPKLHHSLSFSGFPSGHHQPPGGLESPLLLDSPTSRT 287
Score = 88 (36.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 46 SISNSNCQSQTRSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGTCPYIT 104
S S + +SQ + +Q +K GSQ +NS +KT+LC F +GTC Y
Sbjct: 123 SFSENGDRSQHLLHLQQ--QQKGGGGSQ-INSTR-------YKTELCRPFEESGTCKYGE 172
Query: 105 NCNFAHSIEELR 116
C FAH ELR
Sbjct: 173 KCQFAHGFHELR 184
Score = 75 (31.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ +
Sbjct: 192 YKTELCRTFHTIGFCPYGPRCHFIHNADER 221
>TAIR|locus:2199352 [details] [associations]
symbol:AT1G68200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 EMBL:AC016447 HSSP:P22893
eggNOG:COG5063 HOGENOM:HOG000238120 EMBL:DQ446410 EMBL:DQ056514
EMBL:BT026077 IPI:IPI00524596 IPI:IPI00846853 PIR:D96705
RefSeq:NP_001077792.1 RefSeq:NP_176987.1 UniGene:At.52430
ProteinModelPortal:Q9C9F5 SMR:Q9C9F5 PaxDb:Q9C9F5 PRIDE:Q9C9F5
EnsemblPlants:AT1G68200.1 GeneID:843149 KEGG:ath:AT1G68200
GeneFarm:2969 TAIR:At1g68200 InParanoid:Q9C9F5 OMA:SVMENED
PhylomeDB:Q9C9F5 ProtClustDB:CLSN2682260 Genevestigator:Q9C9F5
Uniprot:Q9C9F5
Length = 308
Score = 123 (48.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 230 KTRICNKWELTGYCPFGNKCHFAHGIQEL 258
KT +CNKW+ TG CP+G+ C FAHGI+EL
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKEL 252
Score = 95 (38.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 88 KTKLCCKFRN-GTCPYITNCNFAHSIEELR 116
KT+LC K++ GTCPY +C FAH I+ELR
Sbjct: 224 KTELCNKWQETGTCPYGDHCQFAHGIKELR 253
Score = 81 (33.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 220 GVSNVKP----SNWKTRICNKWELTG-YCPFGNKCHFAHGIQE 257
G+ ++P +KT +C + L G CP+G++CHF H + E
Sbjct: 248 GIKELRPVIRHPRYKTEVC-RMVLAGDNCPYGHRCHFRHSLSE 289
Score = 67 (28.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHD--EQSK 191
YK C+ + CPYG C F H EQ K
Sbjct: 261 YKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEK 292
>RGD|1559581 [details] [associations]
symbol:Zfp36l3 "zinc finger protein 36, C3H type-like 3"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISO] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0017091 "AU-rich element
binding" evidence=ISO] REFSEQ:XM_001053657 Ncbi:XP_001053657
Length = 722
Score = 97 (39.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 27/84 (32%), Positives = 39/84 (46%)
Query: 35 ATEDDYPDDPPSISNSNCQSQTR-SNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCC 93
A + P +P S ++ + + N E +K + Q ++S S +KT+LC
Sbjct: 74 AVSCEAPQEP---SGASAELRVHPGNGEHSLQQKPKQ--QKMSSSSSQATSERYKTELCR 128
Query: 94 KFR-NGTCPYITNCNFAHSIEELR 116
F NGTC Y C FAH ELR
Sbjct: 129 PFEENGTCRYGNKCQFAHGYHELR 152
Score = 88 (36.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE-LHRFGGGLVESENN 271
+KT C + GYCP+G++CHF H E L G + E ++
Sbjct: 160 YKTEPCRTFHSIGYCPYGSRCHFIHNQPEQLPMLPGSVSEEPSS 203
Score = 74 (31.1 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDE 188
YK C+ F++ CPYG C F+H++
Sbjct: 160 YKTEPCRTFHSIGYCPYGSRCHFIHNQ 186
>MGI|MGI:107945 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10090 "Mus musculus" [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=IGI]
[GO:0043488 "regulation of mRNA stability" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:107945
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0033077 GO:GO:0043488
GO:GO:0000288 eggNOG:COG5063 HOVERGEN:HBG008483 OrthoDB:EOG480HXD
InterPro:IPR007635 Pfam:PF04553 ChiTaRS:ZFP36L2 EMBL:M58564
EMBL:M97165 IPI:IPI00138319 PIR:C39590 UniGene:Mm.259321
ProteinModelPortal:P23949 SMR:P23949 STRING:P23949
PhosphoSite:P23949 PaxDb:P23949 PRIDE:P23949 InParanoid:P23949
CleanEx:MM_ZFP36L2 Genevestigator:P23949
GermOnline:ENSMUSG00000045817 Uniprot:P23949
Length = 367
Score = 90 (36.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRF--GGG 264
+KT +C + G+CP+G +CHF H E GGG
Sbjct: 165 YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGG 202
Score = 88 (36.0 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 46 SISNSNCQSQTRSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGTCPYIT 104
S S + +SQ + +Q +K +GSQ +NS +KT+LC F +GTC Y
Sbjct: 96 SFSENGERSQHLLHLQQ--QQKGGSGSQ-INSTR-------YKTELCRPFEESGTCKYGE 145
Query: 105 NCNFAHSIEELR 116
C FAH ELR
Sbjct: 146 KCQFAHGFHELR 157
Score = 75 (31.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ +
Sbjct: 165 YKTELCRTFHTIGFCPYGPRCHFIHNADER 194
>WB|WBGene00013797 [details] [associations]
symbol:Y116A8C.20 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:AL117204
HOGENOM:HOG000114669 PIR:T31492 RefSeq:NP_503020.1
ProteinModelPortal:Q9U2V1 SMR:Q9U2V1 STRING:Q9U2V1
EnsemblMetazoa:Y116A8C.20 GeneID:178478 KEGG:cel:CELE_Y116A8C.20
UCSC:Y116A8C.20 CTD:178478 WormBase:Y116A8C.20 InParanoid:Q9U2V1
NextBio:901292 Uniprot:Q9U2V1
Length = 201
Score = 87 (35.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 228 NWKTRICNKWELTGYCPFGNKCHFAH 253
N+KT +C+K+ TGYC +G +C F H
Sbjct: 129 NYKTVLCDKFTTTGYCKYGIRCQFIH 154
Score = 82 (33.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 87 FKTKLCCKFRNG-TCPYITNCNFAHSIEELR 116
FKT LC + G TC Y C FAH + ELR
Sbjct: 89 FKTALCLSHKRGKTCIYGEQCKFAHGVHELR 119
Score = 71 (30.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 155 AVETQRSYKGRHCKKFYTEEGCPYGENCTFLH 186
A + R+YK C KF T C YG C F+H
Sbjct: 123 AKKNHRNYKTVLCDKFTTTGYCKYGIRCQFIH 154
>WB|WBGene00013794 [details] [associations]
symbol:dct-13 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:AL117204
HOGENOM:HOG000114669 PIR:T31489 RefSeq:NP_503017.1
ProteinModelPortal:Q9U2V4 SMR:Q9U2V4 STRING:Q9U2V4
EnsemblMetazoa:Y116A8C.17 GeneID:178476 KEGG:cel:CELE_Y116A8C.17
UCSC:Y116A8C.17 CTD:178476 WormBase:Y116A8C.17 InParanoid:Q9U2V4
NextBio:901284 Uniprot:Q9U2V4
Length = 205
Score = 88 (36.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 228 NWKTRICNKWELTGYCPFGNKCHFAH 253
N+KT +C+K+ TGYC +G +C F H
Sbjct: 133 NYKTVLCDKFTTTGYCKYGARCQFIH 158
Score = 81 (33.6 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 87 FKTKLCCKFRNG-TCPYITNCNFAHSIEELR 116
FKT LC + G TC Y C FAH + ELR
Sbjct: 93 FKTSLCLSHKRGKTCIYGEACKFAHGVHELR 123
Score = 70 (29.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 160 RSYKGRHCKKFYTEEGCPYGENCTFLH 186
R+YK C KF T C YG C F+H
Sbjct: 132 RNYKTVLCDKFTTTGYCKYGARCQFIH 158
>WB|WBGene00007961 [details] [associations]
symbol:C35D6.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z82261 PIR:T19760
RefSeq:NP_502949.1 UniGene:Cel.13375 ProteinModelPortal:O45289
SMR:O45289 STRING:O45289 EnsemblMetazoa:C35D6.4 GeneID:183235
KEGG:cel:CELE_C35D6.4 UCSC:C35D6.4 CTD:183235 WormBase:C35D6.4
HOGENOM:HOG000114669 InParanoid:O45289 NextBio:920410
Uniprot:O45289
Length = 203
Score = 86 (35.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 74 DVNSKSKAIGKM--FFKTKLCCKFRNGT-CPYITNCNFAHSIEELRRP 118
+++ + K++ K FKT LC R G C Y C FAHS+ ELR P
Sbjct: 74 ELHQEMKSLKKKEEAFKTSLCGFHRRGQKCAYGEKCKFAHSVHELRFP 121
Score = 83 (34.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 228 NWKTRICNKWELTGYCPFGNKCHFAH 253
N+KT +CN + TG+C +G +C F H
Sbjct: 129 NYKTVLCNNFSTTGHCKYGIRCQFIH 154
Score = 70 (29.7 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 160 RSYKGRHCKKFYTEEGCPYGENCTFLH---DEQSKNR----ESVAISL 200
R+YK C F T C YG C F+H D S N+ E++ I L
Sbjct: 128 RNYKTVLCNNFSTTGHCKYGIRCQFIHRSMDSTSSNQSNETENITIDL 175
>UNIPROTKB|P26651 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0050779 "RNA destabilization" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IMP;IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0019957 "C-C chemokine binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0006950 "response to stress" evidence=IDA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0071889
"14-3-3 protein binding" evidence=IDA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IDA] [GO:1900153
"positive regulation of nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0010467 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0003727 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483
CTD:7538 KO:K15308 EMBL:M92843 EMBL:M92844 EMBL:M63625
EMBL:AK314042 EMBL:AY771351 EMBL:BC009693 IPI:IPI00000893
PIR:S34427 RefSeq:NP_003398.2 UniGene:Hs.534052
ProteinModelPortal:P26651 SMR:P26651 DIP:DIP-29845N IntAct:P26651
MINT:MINT-1171915 STRING:P26651 PhosphoSite:P26651 DMDM:136471
PRIDE:P26651 DNASU:7538 Ensembl:ENST00000248673 GeneID:7538
KEGG:hsa:7538 UCSC:uc002olh.1 GeneCards:GC19P039897 HGNC:HGNC:12862
HPA:HPA006009 MIM:190700 neXtProt:NX_P26651 PharmGKB:PA37451
InParanoid:P26651 OMA:RRLPIFN OrthoDB:EOG4S4PH4 PhylomeDB:P26651
ChiTaRS:ZFP36 GenomeRNAi:7538 NextBio:29497 Bgee:P26651
CleanEx:HS_ZFP36 Genevestigator:P26651 GermOnline:ENSG00000128016
Uniprot:P26651
Length = 326
Score = 96 (38.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 222 SNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+N P +KT +C+K+ L G CP+G++CHF H E
Sbjct: 136 ANRHPK-YKTELCHKFYLQGRCPYGSRCHFIHNPSE 170
Score = 83 (34.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHD 187
YK C KFY + CPYG C F+H+
Sbjct: 142 YKTELCHKFYLQGRCPYGSRCHFIHN 167
Score = 79 (32.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 27/105 (25%), Positives = 40/105 (38%)
Query: 17 GNGAPEHWIPNPNDSSVWATEDDYPDDPPS-ISNSNCQSQTRSNSEQP--PNKKSRNGSQ 73
G G+ W +P+DSS P S + +C P P
Sbjct: 31 GWGSSGPWSLSPSDSSPSGVTSRLPGRSTSLVEGRSCGWVPPPPGFAPLAPRLGPELSPS 90
Query: 74 DVNSKSKAIGKMFFKTKLCCKF-RNGTCPYITNCNFAHSIEELRR 117
+ + + +KT+LC F +G C Y C FAH + ELR+
Sbjct: 91 PTSPTATSTTPSRYKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 135
Score = 65 (27.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 147 PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PS S T YK C+ F +E G C YG C F H
Sbjct: 89 PSPTSPTATSTTPSRYKTELCRTF-SESGRCRYGAKCQFAH 128
>UNIPROTKB|G3MWV8 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:DAAA02047057 EMBL:DAAA02047055
EMBL:DAAA02047056 Ensembl:ENSBTAT00000011308 Uniprot:G3MWV8
Length = 324
Score = 95 (38.5 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT +C+K+ L G CP+G++CHF H E
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHNPSE 168
Score = 83 (34.3 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHD 187
YK C KFY + CPYG C F+H+
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHN 165
Score = 80 (33.2 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 57 RSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKF-RNGTCPYITNCNFAHSIEEL 115
R +SE P+ S + +S+ +KT+LC F +G C Y C FAH + EL
Sbjct: 80 RPSSELSPSPTSPTATPTTSSR--------YKTELCRTFSESGRCRYGAKCQFAHGLGEL 131
Query: 116 RR 117
R+
Sbjct: 132 RQ 133
Score = 70 (29.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 140 PREEFQI-PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PR ++ PS S T YK C+ F +E G C YG C F H
Sbjct: 79 PRPSSELSPSPTSPTATPTTSSRYKTELCRTF-SESGRCRYGAKCQFAH 126
>UNIPROTKB|Q0VCR3 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IEA] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IEA] [GO:0019957 "C-C
chemokine binding" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0007243 "intracellular protein kinase cascade"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0006950 GO:GO:0050728 GO:GO:0008270
GO:GO:0003729 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0010494 GO:GO:0060213 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GeneTree:ENSGT00530000063262 GO:GO:0032680
GO:GO:0050779 HOVERGEN:HBG008483 IPI:IPI00698292 UniGene:Bt.3863
OMA:RRLPIFN EMBL:DAAA02047057 EMBL:DAAA02047055 EMBL:DAAA02047056
EMBL:BC120043 SMR:Q0VCR3 Ensembl:ENSBTAT00000066266 Uniprot:Q0VCR3
Length = 325
Score = 95 (38.5 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT +C+K+ L G CP+G++CHF H E
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHNPSE 168
Score = 83 (34.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHD 187
YK C KFY + CPYG C F+H+
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHN 165
Score = 80 (33.2 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 57 RSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKF-RNGTCPYITNCNFAHSIEEL 115
R +SE P+ S + +S+ +KT+LC F +G C Y C FAH + EL
Sbjct: 80 RPSSELSPSPTSPTATPTTSSR--------YKTELCRTFSESGRCRYGAKCQFAHGLGEL 131
Query: 116 RR 117
R+
Sbjct: 132 RQ 133
Score = 70 (29.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 18/49 (36%), Positives = 22/49 (44%)
Query: 140 PREEFQI-PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PR ++ PS S T YK C+ F +E G C YG C F H
Sbjct: 79 PRPSSELSPSPTSPTATPTTSSRYKTELCRTF-SESGRCRYGAKCQFAH 126
>UNIPROTKB|E2RKS9 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071889 "14-3-3 protein binding"
evidence=IEA] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=IEA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0050779 "RNA destabilization" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035925 "mRNA 3'-UTR AU-rich region binding"
evidence=IEA] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA] [GO:0019957 "C-C chemokine binding"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0006950
"response to stress" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005829 GO:GO:0005634
GO:GO:0006950 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0010494
GO:GO:0060213 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GeneTree:ENSGT00530000063262 GO:GO:0032680 GO:GO:0050779
OMA:RRLPIFN EMBL:AAEX03000957 Ensembl:ENSCAFT00000008910
Uniprot:E2RKS9
Length = 324
Score = 96 (38.9 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAAPSDSKLVGVPSK 288
+KT++C+K+ L G CP+G++CHF ++L G V ++ S PS + PS
Sbjct: 140 YKTKVCHKFYLQGGCPYGSRCHFIPFPEDLAAPGHPHVLRQSISFSGLPSGRR----PSP 195
Query: 289 TPVDTVVASVTS 300
P S++S
Sbjct: 196 PPAGLAGPSLSS 207
Score = 84 (34.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFL 185
YK + C KFY + GCPYG C F+
Sbjct: 140 YKTKVCHKFYLQGGCPYGSRCHFI 163
Score = 78 (32.5 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELRR 117
+KT+LC F +G C Y C FAH + ELR+
Sbjct: 102 YKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 133
Score = 66 (28.3 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 147 PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PS S T YK C+ F +E G C YG C F H
Sbjct: 87 PSPTSPTATPTTSSRYKTELCRTF-SESGRCRYGAKCQFAH 126
>UNIPROTKB|J9NWC9 [details] [associations]
symbol:ZFP36L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00530000063262
InterPro:IPR007635 Pfam:PF04553 OMA:PLAIQTH EMBL:AAEX03007468
RefSeq:XP_003639394.1 Ensembl:ENSCAFT00000048010 GeneID:100856710
KEGG:cfa:100856710 Uniprot:J9NWC9
Length = 491
Score = 93 (37.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 24/99 (24%), Positives = 42/99 (42%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELHRFGGGLVESENNDSSAAPSDSKLVGVPSK 288
+KT +C + G+CP+G +CHF H E G + SA D+ +G P +
Sbjct: 196 YKTELCRTFHTIGFCPYGPRCHFIHNADERRPAPSGGASGDLRAFSAR--DALHLGFP-R 252
Query: 289 TPVDTVVASVTSVPHADVYHMGVPSQRSSIVVQRPGQRS 327
P + S++ +H S +++ P R+
Sbjct: 253 EPRPKLHHSLSFSGFPSGHHQPPGGLESPLLLDSPTSRT 291
Score = 86 (35.3 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 24/72 (33%), Positives = 32/72 (44%)
Query: 46 SISNSNCQSQTRSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGTCPYIT 104
S S + +SQ + +Q +K G I +KT+LC F +GTC Y
Sbjct: 122 SFSENGERSQHLLHLQQQQQQKGGGGGG-----GSQINSTRYKTELCRPFEESGTCKYGE 176
Query: 105 NCNFAHSIEELR 116
C FAH ELR
Sbjct: 177 KCQFAHGFHELR 188
Score = 75 (31.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ +
Sbjct: 196 YKTELCRTFHTIGFCPYGPRCHFIHNADER 225
>RGD|1308913 [details] [associations]
symbol:Zfp36l2 "zinc finger protein 36, C3H type-like 2"
species:10116 "Rattus norvegicus" [GO:0000288 "nuclear-transcribed
mRNA catabolic process, deadenylation-dependent decay"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033077 "T cell differentiation in thymus" evidence=ISO]
[GO:0043488 "regulation of mRNA stability" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
RGD:1308913 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 CTD:678 OMA:PLAIQTH IPI:IPI00553840
RefSeq:NP_001031703.1 Ensembl:ENSRNOT00000006725 GeneID:298765
KEGG:rno:298765 UCSC:RGD:1308913 Uniprot:D3ZHK9
Length = 482
Score = 90 (36.7 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 35/106 (33%), Positives = 49/106 (46%)
Query: 17 GNGAPEHW--IPNPNDSSVWAT---EDDYPDDPPSISNSNCQSQTRSNSEQPPNKKSRNG 71
G G P + + P+ S A E + D S S + +SQ + +Q +K +G
Sbjct: 89 GAGGPSSYGQLKEPSGGSGTALVNKESKFRDR--SFSENGERSQHLLHLQQ--QQKGGSG 144
Query: 72 SQDVNSKSKAIGKMFFKTKLCCKFR-NGTCPYITNCNFAHSIEELR 116
SQ +NS +KT+LC F +GTC Y C FAH ELR
Sbjct: 145 SQ-INSTR-------YKTELCRPFEESGTCKYGEKCQFAHGFHELR 182
Score = 89 (36.4 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT +C + G+CP+G +CHF H E
Sbjct: 190 YKTELCRTFHTIGFCPYGPRCHFIHNADE 218
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ +
Sbjct: 190 YKTELCRTFHTIGFCPYGPRCHFIHNADER 219
>DICTYBASE|DDB_G0285973 [details] [associations]
symbol:DDB_G0285973 "Butyrate response factor 2"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 dictyBase:DDB_G0285973 GO:GO:0008270 GO:GO:0003676
EMBL:AAFI02000082 eggNOG:COG5063 RefSeq:XP_637949.2
ProteinModelPortal:Q54MG5 SMR:Q54MG5 EnsemblProtists:DDB0218764
GeneID:8625376 KEGG:ddi:DDB_G0285973 InParanoid:Q54MG5 OMA:WSSDEAS
Uniprot:Q54MG5
Length = 437
Score = 94 (38.1 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 33/114 (28%), Positives = 52/114 (45%)
Query: 13 HIIVGNGAPEHWIPNPNDSSVW-----ATEDDYPD---DPP-SISNSNCQSQTRSNSEQP 63
HI G+ A +W+ N +DS V Y D PP S+ + Q Q ++Q
Sbjct: 122 HINSGDNA--NWLSN-SDSLVQPPLKRGLIKAYSDADIQPPLSVQQHHQQQQMLQQAQQD 178
Query: 64 PNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFRN-GTCPYITNCNFAHSIEELR 116
+ + ++N +++ +KT+LC F+ G C Y C FAH +ELR
Sbjct: 179 LENEQEDIEDEINGQNR------YKTELCRSFQETGVCRYGLKCQFAHGRDELR 226
Score = 83 (34.3 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLH 186
YK CK FY+ CPYG C F+H
Sbjct: 234 YKTETCKTFYSIGSCPYGSRCRFIH 258
Score = 70 (29.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 222 SNVKPSNWKTRICNKWELTGYCPFGNKCHFAH 253
S ++ +KT C + G CP+G++C F H
Sbjct: 227 SVMRHPKYKTETCKTFYSIGSCPYGSRCRFIH 258
>UNIPROTKB|D0VE66 [details] [associations]
symbol:LOC100623625 "Tristetraprolin" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 eggNOG:COG5063 GeneTree:ENSGT00530000063262 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:FP102918 EMBL:FP236263
EMBL:GU066778 EMBL:HM484335 EMBL:HM480487 RefSeq:NP_001161891.1
RefSeq:XP_003355955.1 UniGene:Ssc.28024 STRING:D0VE66
Ensembl:ENSSSCT00000011714 Ensembl:ENSSSCT00000026750
GeneID:100316849 GeneID:100623625 KEGG:ssc:100316849
KEGG:ssc:100623625 Uniprot:D0VE66
Length = 326
Score = 95 (38.5 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT +C+K+ L G CP+G++CHF H E
Sbjct: 141 YKTELCHKFYLQGRCPYGSRCHFIHNPSE 169
Score = 83 (34.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHD 187
YK C KFY + CPYG C F+H+
Sbjct: 141 YKTELCHKFYLQGRCPYGSRCHFIHN 166
Score = 78 (32.5 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELRR 117
+KT+LC F +G C Y C FAH + ELR+
Sbjct: 103 YKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 134
Score = 66 (28.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 147 PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PS S T YK C+ F +E G C YG C F H
Sbjct: 88 PSPTSPTSTPTTSSRYKTELCRTF-SESGRCRYGAKCQFAH 127
>WB|WBGene00003864 [details] [associations]
symbol:oma-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0048599 "oocyte development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0001556 "oocyte maturation" evidence=IGI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0006915 GO:GO:0008270
GO:GO:0003676 GO:GO:0001556 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:Z54236 EMBL:Z54235 PIR:T19155
RefSeq:NP_501542.1 ProteinModelPortal:G5EC86 SMR:G5EC86
IntAct:G5EC86 EnsemblMetazoa:C09G9.6.1 EnsemblMetazoa:C09G9.6.2
GeneID:177703 KEGG:cel:CELE_C09G9.6 CTD:177703 WormBase:C09G9.6
OMA:LLEDIAF NextBio:898006 Uniprot:G5EC86
Length = 407
Score = 90 (36.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 221 VSNVKPSNWKTRICNKWELTGYCPFGNKCHFAH 253
V ++ + +KT++C+K+ TG CP+G +C F H
Sbjct: 147 VEPLQNNKYKTKLCDKYTTTGLCPYGKRCLFIH 179
Score = 86 (35.3 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 49 NSNCQS-QTRSNSEQPPNKKSRNGSQDVNSKSKAIGKM----FFKTKLCCKF-RNGTCPY 102
N + QS Q R+ P N + Q + + + + +M +KT +C + + TC +
Sbjct: 70 NQHIQSMQVRAIQSFPQNNQVAPPFQQFDPRRRGLARMQKPESYKTVICQAWLESKTCSF 129
Query: 103 ITNCNFAHSIEELR 116
NC FAH EELR
Sbjct: 130 ADNCRFAHGEEELR 143
Score = 81 (33.6 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSKN 192
YK + C K+ T CPYG+ C F+H + N
Sbjct: 155 YKTKLCDKYTTTGLCPYGKRCLFIHPDHGPN 185
>UNIPROTKB|G5EC86 [details] [associations]
symbol:oma-1 "Protein OMA-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0006915 GO:GO:0008270
GO:GO:0003676 GO:GO:0001556 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:Z54236 EMBL:Z54235 PIR:T19155
RefSeq:NP_501542.1 ProteinModelPortal:G5EC86 SMR:G5EC86
IntAct:G5EC86 EnsemblMetazoa:C09G9.6.1 EnsemblMetazoa:C09G9.6.2
GeneID:177703 KEGG:cel:CELE_C09G9.6 CTD:177703 WormBase:C09G9.6
OMA:LLEDIAF NextBio:898006 Uniprot:G5EC86
Length = 407
Score = 90 (36.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 221 VSNVKPSNWKTRICNKWELTGYCPFGNKCHFAH 253
V ++ + +KT++C+K+ TG CP+G +C F H
Sbjct: 147 VEPLQNNKYKTKLCDKYTTTGLCPYGKRCLFIH 179
Score = 86 (35.3 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 49 NSNCQS-QTRSNSEQPPNKKSRNGSQDVNSKSKAIGKM----FFKTKLCCKF-RNGTCPY 102
N + QS Q R+ P N + Q + + + + +M +KT +C + + TC +
Sbjct: 70 NQHIQSMQVRAIQSFPQNNQVAPPFQQFDPRRRGLARMQKPESYKTVICQAWLESKTCSF 129
Query: 103 ITNCNFAHSIEELR 116
NC FAH EELR
Sbjct: 130 ADNCRFAHGEEELR 143
Score = 81 (33.6 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSKN 192
YK + C K+ T CPYG+ C F+H + N
Sbjct: 155 YKTKLCDKYTTTGLCPYGKRCLFIHPDHGPN 185
>UNIPROTKB|P47974 [details] [associations]
symbol:ZFP36L2 "Zinc finger protein 36, C3H1 type-like 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0043488 "regulation of
mRNA stability" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0005737
EMBL:CH471053 GO:GO:0046872 GO:GO:0003677 GO:GO:0008283
GO:GO:0008270 GO:GO:0003700 GO:GO:0003723 GO:GO:0043488
GO:GO:0000288 CleanEx:HS_BRF2 eggNOG:COG5063 HOGENOM:HOG000233479
HOVERGEN:HBG008483 OrthoDB:EOG480HXD InterPro:IPR007635
Pfam:PF04553 EMBL:U07802 EMBL:X78992 EMBL:AC010883 EMBL:BC005010
IPI:IPI00604786 PIR:S49147 RefSeq:NP_008818.3 UniGene:Hs.503093
UniGene:Hs.705738 PDB:1RGO PDBsum:1RGO ProteinModelPortal:P47974
SMR:P47974 IntAct:P47974 STRING:P47974 PhosphoSite:P47974
DMDM:146291085 PRIDE:P47974 DNASU:678 Ensembl:ENST00000282388
GeneID:678 KEGG:hsa:678 UCSC:uc002rsv.4 CTD:678
GeneCards:GC02M043449 HGNC:HGNC:1108 HPA:HPA047428 MIM:612053
neXtProt:NX_P47974 PharmGKB:PA35028 InParanoid:P47974 OMA:PLAIQTH
PhylomeDB:P47974 ChiTaRS:ZFP36L2 EvolutionaryTrace:P47974
GenomeRNAi:678 NextBio:2794 Bgee:P47974 CleanEx:HS_ZFP36L2
Genevestigator:P47974 GermOnline:ENSG00000152518 Uniprot:P47974
Length = 494
Score = 89 (36.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT +C + G+CP+G +CHF H E
Sbjct: 192 YKTELCRTFHTIGFCPYGPRCHFIHNADE 220
Score = 88 (36.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 27/72 (37%), Positives = 36/72 (50%)
Query: 46 SISNSNCQSQTRSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFR-NGTCPYIT 104
S S + +SQ + +Q +K GSQ +NS +KT+LC F +GTC Y
Sbjct: 123 SFSENGDRSQHLLHLQQ--QQKGGGGSQ-INSTR-------YKTELCRPFEESGTCKYGE 172
Query: 105 NCNFAHSIEELR 116
C FAH ELR
Sbjct: 173 KCQFAHGFHELR 184
Score = 75 (31.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ +
Sbjct: 192 YKTELCRTFHTIGFCPYGPRCHFIHNADER 221
>ZFIN|ZDB-GENE-030131-5873 [details] [associations]
symbol:zfp36l2 "zinc finger protein 36, C3H
type-like 2" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-5873 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 InterPro:IPR007635 Pfam:PF04553
EMBL:CR932077 IPI:IPI00508201 Ensembl:ENSDART00000142674
ArrayExpress:F1QU82 Bgee:F1QU82 Uniprot:F1QU82
Length = 373
Score = 89 (36.4 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 40 YPDDPPSISNSNCQSQTRSNSEQPPNKKSRNGSQDVNSK-SKAIGKMFFKTKLCCKFR-N 97
+ P+ N + + R+ S+ ++S+ + + K I +KT+LC F N
Sbjct: 72 FESSTPAFMNKENKYRDRAFSDA--GERSQQLQEMLQQKPGSQINSTRYKTELCRPFEEN 129
Query: 98 GTCPYITNCNFAHSIEELR 116
G+C Y C FAH ELR
Sbjct: 130 GSCKYGEKCQFAHGYHELR 148
Score = 84 (34.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT C + G+CP+G +CHF H E
Sbjct: 156 YKTEPCRTFHTIGFCPYGPRCHFIHNADE 184
Score = 76 (31.8 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSK 191
YK C+ F+T CPYG C F+H+ +
Sbjct: 156 YKTEPCRTFHTIGFCPYGPRCHFIHNADER 185
>MGI|MGI:99180 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IMP] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=IDA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0006402 "mRNA catabolic process"
evidence=ISO] [GO:0006950 "response to stress" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=ISO] [GO:0017091 "AU-rich
element binding" evidence=ISO;IDA] [GO:0019901 "protein kinase
binding" evidence=ISO] [GO:0019957 "C-C chemokine binding"
evidence=ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=ISO] [GO:0035925 "mRNA 3'-UTR AU-rich region
binding" evidence=IDA] [GO:0043488 "regulation of mRNA stability"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IMP] [GO:0050779 "RNA destabilization"
evidence=IMP] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISO]
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISO]
[GO:0071889 "14-3-3 protein binding" evidence=ISO]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
MGI:MGI:99180 GO:GO:0005829 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0050728 GO:GO:0008270
GO:GO:0007243 GO:GO:0000122 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0035925 GO:GO:0050779
HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538 KO:K15308
OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:M57422 EMBL:M58691 EMBL:X14678
EMBL:M58565 EMBL:L42317 EMBL:BC021391 IPI:IPI00132695 PIR:A36600
PIR:S04743 RefSeq:NP_035886.1 UniGene:Mm.389856 PDB:1M9O
PDBsum:1M9O ProteinModelPortal:P22893 SMR:P22893 IntAct:P22893
MINT:MINT-225240 STRING:P22893 PhosphoSite:P22893 PRIDE:P22893
Ensembl:ENSMUST00000051241 GeneID:22695 KEGG:mmu:22695
InParanoid:P22893 EvolutionaryTrace:P22893 NextBio:303151
Bgee:P22893 CleanEx:MM_ZFP36 Genevestigator:P22893
GermOnline:ENSMUSG00000044786 Uniprot:P22893
Length = 319
Score = 95 (38.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 222 SNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+N P +KT +C+K+ L G CP+G++CHF H E
Sbjct: 128 ANRHPK-YKTELCHKFYLQGRCPYGSRCHFIHNPTE 162
Score = 83 (34.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHD 187
YK C KFY + CPYG C F+H+
Sbjct: 134 YKTELCHKFYLQGRCPYGSRCHFIHN 159
Score = 75 (31.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELRR 117
+KT+LC + +G C Y C FAH + ELR+
Sbjct: 96 YKTELCRTYSESGRCRYGAKCQFAHGLGELRQ 127
Score = 67 (28.6 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 147 PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PS S T YK C+ Y+E G C YG C F H
Sbjct: 81 PSPTSPTATPTTSSRYKTELCRT-YSESGRCRYGAKCQFAH 120
>TAIR|locus:2033384 [details] [associations]
symbol:AT1G66810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AC013288 IPI:IPI00526106 RefSeq:NP_176853.1
UniGene:At.70746 HSSP:P22893 ProteinModelPortal:Q9C9N3 SMR:Q9C9N3
PaxDb:Q9C9N3 PRIDE:Q9C9N3 EnsemblPlants:AT1G66810.1 GeneID:842999
KEGG:ath:AT1G66810 TAIR:At1g66810 eggNOG:COG5063
HOGENOM:HOG000238120 InParanoid:Q9C9N3 OMA:ELNEHYE PhylomeDB:Q9C9N3
ProtClustDB:CLSN2681801 Genevestigator:Q9C9N3 Uniprot:Q9C9N3
Length = 310
Score = 113 (44.8 bits), Expect = 0.00066, P = 0.00066
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 230 KTRICNKWELTGYCPFGNKCHFAHGIQEL 258
KT +CNKW+ TG C +G+ C FAHGI EL
Sbjct: 234 KTELCNKWQETGACCYGDNCQFAHGIDEL 262
Score = 87 (35.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 47 ISNSNCQSQTRSNSEQPPNKKSRNGSQDVNSKSKAIGKMFFKTKLCCKFRN-GTCPYITN 105
+ S S + S+S++ +++ + + + G M KT+LC K++ G C Y N
Sbjct: 195 LQTSQLSSNSVSSSQKVCVVQTKGEREALELEVYRQGMM--KTELCNKWQETGACCYGDN 252
Query: 106 CNFAHSIEELR 116
C FAH I+ELR
Sbjct: 253 CQFAHGIDELR 263
Score = 83 (34.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 220 GVSNVKP----SNWKTRICNKWELTGYCPFGNKCHFAHGIQELHR 260
G+ ++P +KT +C CP+G++CHF H + + R
Sbjct: 258 GIDELRPVIRHPRYKTEVCRMMVTGAMCPYGHRCHFRHSLTDQER 302
>WB|WBGene00009537 [details] [associations]
symbol:ccch-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0009792
GO:GO:0008270 GO:GO:0003676 eggNOG:COG5063
GeneTree:ENSGT00530000063262 EMBL:Z82267 HOGENOM:HOG000114059
PIR:T21961 RefSeq:NP_502931.1 ProteinModelPortal:O45491 SMR:O45491
IntAct:O45491 STRING:O45491 EnsemblMetazoa:F38C2.5 GeneID:178454
KEGG:cel:CELE_F38C2.5 UCSC:F38C2.5 CTD:178454 WormBase:F38C2.5
InParanoid:O45491 NextBio:901202 Uniprot:O45491
Length = 186
Score = 82 (33.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 218 NIGVSNVKPSNWKTRICNKWELTGYCPFGNKCHFAH 253
N GV++ K +KT +C+ + TG+C +G KC F H
Sbjct: 108 NRGVNHPK---YKTVLCDNFSRTGHCKYGTKCQFIH 140
Score = 80 (33.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 87 FKTKLCCKFR-NGTCPYITNCNFAHSIEELRRPPPN 121
FKT LC F+ C Y C FAHS+EEL+ N
Sbjct: 73 FKTALCKTFQLTRACSYGEQCKFAHSVEELQLKQKN 108
Score = 68 (29.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 159 QRSYKGRHCKKFYTEEGCPYGENCTFLH 186
+ ++K CK F C YGE C F H
Sbjct: 70 ENAFKTALCKTFQLTRACSYGEQCKFAH 97
>WB|WBGene00013370 [details] [associations]
symbol:Y60A9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
eggNOG:COG5063 GeneTree:ENSGT00530000063262 HOGENOM:HOG000114669
EMBL:AL110495 RefSeq:NP_510397.1 UniGene:Cel.512
ProteinModelPortal:Q9U1Y2 SMR:Q9U1Y2 EnsemblMetazoa:Y60A9.3
GeneID:190441 KEGG:cel:CELE_Y60A9.3 UCSC:Y60A9.3 CTD:190441
WormBase:Y60A9.3 InParanoid:Q9U1Y2 NextBio:945766 Uniprot:Q9U1Y2
Length = 203
Score = 88 (36.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 228 NWKTRICNKWELTGYCPFGNKCHFAH 253
N+KT +CNK+ TG+C +G +C F H
Sbjct: 129 NYKTVLCNKFSTTGHCKYGIRCQFIH 154
Score = 76 (31.8 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 20/48 (41%), Positives = 24/48 (50%)
Query: 160 RSYKGRHCKKFYTEEGCPYGENCTFLH---DEQSKNR----ESVAISL 200
R+YK C KF T C YG C F+H D S N+ E+V I L
Sbjct: 128 RNYKTVLCNKFSTTGHCKYGIRCQFIHRSMDSTSSNQSNETENVTIDL 175
Score = 74 (31.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 17/33 (51%), Positives = 18/33 (54%)
Query: 87 FKTKLCCKFRNGT-CPYITNCNFAHSIEELRRP 118
FKT L R G C Y C FAHS+ ELR P
Sbjct: 89 FKTSLYGFHRRGQKCAYGEKCKFAHSVHELRFP 121
>UNIPROTKB|J9NTC7 [details] [associations]
symbol:ZFP36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063262 EMBL:AAEX03000957
Ensembl:ENSCAFT00000042970 Uniprot:J9NTC7
Length = 294
Score = 88 (36.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 12/23 (52%), Positives = 20/23 (86%)
Query: 229 WKTRICNKWELTGYCPFGNKCHF 251
+KT++C+K+ L G CP+G++CHF
Sbjct: 145 YKTKVCHKFYLQGGCPYGSRCHF 167
Score = 84 (34.6 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFL 185
YK + C KFY + GCPYG C F+
Sbjct: 145 YKTKVCHKFYLQGGCPYGSRCHFI 168
Score = 78 (32.5 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELRR 117
+KT+LC F +G C Y C FAH + ELR+
Sbjct: 107 YKTELCRTFSESGRCRYGAKCQFAHGLGELRQ 138
Score = 66 (28.3 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 147 PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PS S T YK C+ F +E G C YG C F H
Sbjct: 92 PSPTSPTATPTTSSRYKTELCRTF-SESGRCRYGAKCQFAH 131
>ZFIN|ZDB-GENE-030131-6366 [details] [associations]
symbol:zgc:162730 "zgc:162730" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-030131-6366 GO:GO:0008270 GO:GO:0003676
HOGENOM:HOG000233479 EMBL:BC139894 IPI:IPI00933596
UniGene:Dr.106159 STRING:A5D6V0 HOVERGEN:HBG105016
InParanoid:A5D6V0 OrthoDB:EOG4PK294 ArrayExpress:A5D6V0
Uniprot:A5D6V0
Length = 336
Score = 88 (36.0 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHDEQSKNRE 194
YK + C+ FY CPYG C F+H+E+S E
Sbjct: 151 YKTQACRTFYQFGYCPYGSRCHFIHEEKSSLSE 183
Score = 86 (35.3 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAH 253
+KT+ C + GYCP+G++CHF H
Sbjct: 151 YKTQACRTFYQFGYCPYGSRCHFIH 175
Score = 79 (32.9 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 87 FKTKLCCKFR-NGTCPYITNCNFAHSIEELR 116
+KT+LC F+ +G+C Y C FAH ELR
Sbjct: 113 YKTELCRSFQEHGSCKYGAKCQFAHGENELR 143
>RGD|620722 [details] [associations]
symbol:Zfp36 "zinc finger protein 36" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISO] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006402 "mRNA catabolic process"
evidence=ISO;ISS] [GO:0006950 "response to stress"
evidence=IEA;ISO;ISS] [GO:0007243 "intracellular protein kinase
cascade" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA;ISO;ISS] [GO:0017091 "AU-rich element binding"
evidence=ISO;ISS] [GO:0019901 "protein kinase binding"
evidence=IEA;ISO] [GO:0019957 "C-C chemokine binding"
evidence=IEA;ISO] [GO:0032680 "regulation of tumor necrosis factor
production" evidence=IEA;ISO;ISS] [GO:0035925 "mRNA 3'-UTR AU-rich
region binding" evidence=IEA;ISO] [GO:0043488 "regulation of mRNA
stability" evidence=ISO] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA;ISO] [GO:0050779 "RNA destabilization"
evidence=IEA;ISO] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA;ISO;ISS] [GO:0070935 "3'-UTR-mediated mRNA
stabilization" evidence=IEA;ISO;ISS] [GO:0071889 "14-3-3 protein
binding" evidence=IEA;ISO;ISS] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 RGD:620722 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0007243 GO:GO:0017091 GO:GO:0000122 GO:GO:0006402
GO:GO:0071889 GO:GO:0010494 GO:GO:0060213 eggNOG:COG5063
GO:GO:0000289 GO:GO:0045638 GO:GO:0070935 GO:GO:0032680
GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483 CTD:7538
KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4 EMBL:X63369 EMBL:AB025017
EMBL:BC060308 IPI:IPI00192126 PIR:JC1255 RefSeq:NP_579824.2
UniGene:Rn.82737 ProteinModelPortal:P47973 SMR:P47973 STRING:P47973
PhosphoSite:P47973 PRIDE:P47973 GeneID:79426 KEGG:rno:79426
UCSC:RGD:620722 InParanoid:P47973 NextBio:614778
Genevestigator:P47973 GermOnline:ENSRNOG00000019673 Uniprot:P47973
Length = 320
Score = 95 (38.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 222 SNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+N P +KT +C+K+ L G CP+G++CHF H E
Sbjct: 129 ANRHPK-YKTELCHKFYLQGRCPYGSRCHFIHNPTE 163
Score = 83 (34.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHD 187
YK C KFY + CPYG C F+H+
Sbjct: 135 YKTELCHKFYLQGRCPYGSRCHFIHN 160
Score = 70 (29.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELRR 117
+KT+LC + +G C Y C FAH ELR+
Sbjct: 97 YKTELCRTYSESGRCRYGAKCQFAHGPGELRQ 128
Score = 67 (28.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 147 PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PS S T YK C+ Y+E G C YG C F H
Sbjct: 82 PSPTSPTATPTTSSRYKTELCRT-YSESGRCRYGAKCQFAH 121
>UNIPROTKB|P47973 [details] [associations]
symbol:Zfp36 "Tristetraprolin" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0019957 "C-C chemokine binding" evidence=IEA]
[GO:0035925 "mRNA 3'-UTR AU-rich region binding" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0050728 "negative regulation of inflammatory
response" evidence=IEA] [GO:0050779 "RNA destabilization"
evidence=IEA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 RGD:620722 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
GO:GO:0006950 GO:GO:0046872 GO:GO:0003677 GO:GO:0050728
GO:GO:0008270 GO:GO:0003729 GO:GO:0007243 GO:GO:0017091
GO:GO:0000122 GO:GO:0006402 GO:GO:0071889 GO:GO:0010494
GO:GO:0060213 eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638
GO:GO:0070935 GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479
HOVERGEN:HBG008483 CTD:7538 KO:K15308 OMA:RRLPIFN OrthoDB:EOG4S4PH4
EMBL:X63369 EMBL:AB025017 EMBL:BC060308 IPI:IPI00192126 PIR:JC1255
RefSeq:NP_579824.2 UniGene:Rn.82737 ProteinModelPortal:P47973
SMR:P47973 STRING:P47973 PhosphoSite:P47973 PRIDE:P47973
GeneID:79426 KEGG:rno:79426 UCSC:RGD:620722 InParanoid:P47973
NextBio:614778 Genevestigator:P47973 GermOnline:ENSRNOG00000019673
Uniprot:P47973
Length = 320
Score = 95 (38.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 222 SNVKPSNWKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+N P +KT +C+K+ L G CP+G++CHF H E
Sbjct: 129 ANRHPK-YKTELCHKFYLQGRCPYGSRCHFIHNPTE 163
Score = 83 (34.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 162 YKGRHCKKFYTEEGCPYGENCTFLHD 187
YK C KFY + CPYG C F+H+
Sbjct: 135 YKTELCHKFYLQGRCPYGSRCHFIHN 160
Score = 70 (29.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELRR 117
+KT+LC + +G C Y C FAH ELR+
Sbjct: 97 YKTELCRTYSESGRCRYGAKCQFAHGPGELRQ 128
Score = 67 (28.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 147 PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PS S T YK C+ Y+E G C YG C F H
Sbjct: 82 PSPTSPTATPTTSSRYKTELCRT-YSESGRCRYGAKCQFAH 121
>WB|WBGene00004078 [details] [associations]
symbol:pos-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0001708 "cell fate
specification" evidence=IMP] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0003730
"mRNA 3'-UTR binding" evidence=IDA;IPI] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0001708
GO:GO:0008340 GO:GO:0009792 GO:GO:0008266 GO:GO:0008270
GO:GO:0003730 GO:GO:0009880 GO:GO:0001106 HSSP:P22893 GO:GO:0043186
GeneTree:ENSGT00530000063262 EMBL:FO081326 EMBL:AB006208 PIR:T37246
RefSeq:NP_505172.1 UniGene:Cel.19584 ProteinModelPortal:G5EF15
SMR:G5EF15 IntAct:G5EF15 EnsemblMetazoa:F52E1.1 GeneID:179224
KEGG:cel:CELE_F52E1.1 CTD:179224 WormBase:F52E1.1 OMA:QFIHKLV
ChEMBL:CHEMBL1293304 NextBio:904448 Uniprot:G5EF15
Length = 264
Score = 82 (33.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQELH--RFGGGLVESENNDSSAAPS 278
+KT +C+K+ +TG C +G +C F H I + + + G + N SS +P+
Sbjct: 142 YKTVLCDKFSMTGNCKYGTRCQFIHKIVDGNAAKLASG---AHANTSSKSPA 190
Score = 81 (33.6 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELRRP 118
FKT LC + R+ C Y C FAH + ELR P
Sbjct: 99 FKTALCDAYKRSQACSYGDQCRFAHGVHELRLP 131
>UNIPROTKB|P53781 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9913 "Bos taurus"
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=ISS]
[GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0071889
"14-3-3 protein binding" evidence=ISS] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=ISS] [GO:0006950
"response to stress" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0060213
"positive regulation of nuclear-transcribed mRNA poly(A) tail
shortening" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0017091 "AU-rich element binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 GO:GO:0006950
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0017091
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
GO:GO:0070935 GO:GO:0032680 HOVERGEN:HBG008483 EMBL:L42319
IPI:IPI00698292 RefSeq:NP_776918.1 UniGene:Bt.3863
ProteinModelPortal:P53781 SMR:P53781 PRIDE:P53781 GeneID:282127
KEGG:bta:282127 CTD:7538 KO:K15308 NextBio:20805964 Uniprot:P53781
Length = 324
Score = 95 (38.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT +C+K+ L G CP+G++CHF H E
Sbjct: 140 YKTELCHKFYLQGRCPYGSRCHFIHNPSE 168
Score = 66 (28.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/41 (39%), Positives = 18/41 (43%)
Query: 147 PSIVSTNFAVETQRSYKGRHCKKFYTEEG-CPYGENCTFLH 186
PS S T YK C+ F +E G C YG C F H
Sbjct: 87 PSPTSPTATPTTSSRYKTELCRTF-SESGRCRYGAKCQFAH 126
>WB|WBGene00003388 [details] [associations]
symbol:moe-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0048599 "oocyte development"
evidence=IMP] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0008270 GO:GO:0003676 GO:GO:0048599 HSSP:P22893
eggNOG:COG5063 GeneTree:ENSGT00530000063262 EMBL:Z81521
HOGENOM:HOG000016873 PIR:T21620 RefSeq:NP_496795.1
UniGene:Cel.15255 ProteinModelPortal:Q9XV46 SMR:Q9XV46
DIP:DIP-25142N IntAct:Q9XV46 MINT:MINT-1108588 STRING:Q9XV46
EnsemblMetazoa:F32A11.6 GeneID:174960 KEGG:cel:CELE_F32A11.6
UCSC:F32A11.6 CTD:174960 WormBase:F32A11.6 InParanoid:Q9XV46
OMA:HLAEDMA NextBio:886196 Uniprot:Q9XV46
Length = 367
Score = 88 (36.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 227 SNWKTRICNKWELTGYCPFGNKCHFAH 253
+ +KT++C+K+ TG CP+G +C F H
Sbjct: 171 NKYKTKLCDKYTTTGLCPYGKRCLFIH 197
Score = 72 (30.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELR 116
+KT +C + + TC + NC FAH EELR
Sbjct: 131 YKTVICQAWLESKTCTFAENCRFAHGEEELR 161
>WB|WBGene00004027 [details] [associations]
symbol:pie-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0001704 "formation of primary germ
layer" evidence=IMP] [GO:0009880 "embryonic pattern specification"
evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0043186 "P granule" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005829 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005813 GO:GO:0005819 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0009880 EMBL:Z98866 GO:GO:0001709 GO:GO:0043186 GO:GO:0001704
EMBL:U62896 PIR:S71796 PIR:T27052 RefSeq:NP_001255166.1
RefSeq:NP_001255167.1 UniGene:Cel.19704 ProteinModelPortal:Q94131
SMR:Q94131 DIP:DIP-25777N IntAct:Q94131 MINT:MINT-1058685
STRING:Q94131 PaxDb:Q94131 PRIDE:Q94131 EnsemblMetazoa:Y49E10.14a.1
EnsemblMetazoa:Y49E10.14a.2 GeneID:176667 KEGG:cel:CELE_Y49E10.14
UCSC:Y49E10.14.1 CTD:176667 WormBase:Y49E10.14a WormBase:Y49E10.14b
eggNOG:NOG246890 HOGENOM:HOG000019522 InParanoid:Q94131 OMA:CPARIQN
NextBio:893532 Uniprot:Q94131
Length = 335
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 38/119 (31%), Positives = 54/119 (45%)
Query: 87 FKTKLCCKFRN-GTCPYITNCNFAHSIEELRRPPPNWQEIVAAHEEERASTNEIPREEFQ 145
+KT+LC FR G CPY NC +AH +ELR P QE + + R++
Sbjct: 99 YKTRLCDAFRREGYCPYNDNCTYAHGQDELRVPRRR-QEYYSRDPPRERRDSRSRRDDVD 157
Query: 146 IPSIVSTNFAV----ETQR-------SYKGRHCKKFYTEEG-CPYGENCTFLHDEQSKN 192
S++ A E +R S + + C F E G C YG C F+H EQ ++
Sbjct: 158 TTINRSSSSASKHHDENRRPSNNHGSSNRRQICHNF--ERGNCRYGPRCRFIHVEQMQH 214
>UNIPROTKB|Q94131 [details] [associations]
symbol:pie-1 "Pharynx and intestine in excess protein 1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005829 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005813 GO:GO:0005819 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0009880 EMBL:Z98866 GO:GO:0001709 GO:GO:0043186 GO:GO:0001704
EMBL:U62896 PIR:S71796 PIR:T27052 RefSeq:NP_001255166.1
RefSeq:NP_001255167.1 UniGene:Cel.19704 ProteinModelPortal:Q94131
SMR:Q94131 DIP:DIP-25777N IntAct:Q94131 MINT:MINT-1058685
STRING:Q94131 PaxDb:Q94131 PRIDE:Q94131 EnsemblMetazoa:Y49E10.14a.1
EnsemblMetazoa:Y49E10.14a.2 GeneID:176667 KEGG:cel:CELE_Y49E10.14
UCSC:Y49E10.14.1 CTD:176667 WormBase:Y49E10.14a WormBase:Y49E10.14b
eggNOG:NOG246890 HOGENOM:HOG000019522 InParanoid:Q94131 OMA:CPARIQN
NextBio:893532 Uniprot:Q94131
Length = 335
Score = 117 (46.2 bits), Expect = 0.00027, P = 0.00027
Identities = 38/119 (31%), Positives = 54/119 (45%)
Query: 87 FKTKLCCKFRN-GTCPYITNCNFAHSIEELRRPPPNWQEIVAAHEEERASTNEIPREEFQ 145
+KT+LC FR G CPY NC +AH +ELR P QE + + R++
Sbjct: 99 YKTRLCDAFRREGYCPYNDNCTYAHGQDELRVPRRR-QEYYSRDPPRERRDSRSRRDDVD 157
Query: 146 IPSIVSTNFAV----ETQR-------SYKGRHCKKFYTEEG-CPYGENCTFLHDEQSKN 192
S++ A E +R S + + C F E G C YG C F+H EQ ++
Sbjct: 158 TTINRSSSSASKHHDENRRPSNNHGSSNRRQICHNF--ERGNCRYGPRCRFIHVEQMQH 214
>FB|FBgn0011837 [details] [associations]
symbol:Tis11 "Tis11 homolog" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0010629 "negative regulation of gene expression" evidence=IDA]
[GO:0003730 "mRNA 3'-UTR binding" evidence=IDA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005634
GO:GO:0016246 GO:GO:0046872 GO:GO:0003677 EMBL:AE014298
GO:GO:0008270 GO:GO:0003730 eggNOG:COG5063
GeneTree:ENSGT00530000063262 EMBL:U13397 EMBL:X81194
RefSeq:NP_511141.2 RefSeq:NP_727633.1 UniGene:Dm.4329
ProteinModelPortal:P47980 SMR:P47980 MINT:MINT-914241 STRING:P47980
PaxDb:P47980 EnsemblMetazoa:FBtr0073683 EnsemblMetazoa:FBtr0333756
GeneID:32222 KEGG:dme:Dmel_CG4070 CTD:32222 FlyBase:FBgn0011837
InParanoid:P47980 OMA:MNTSRYK OrthoDB:EOG47WM4T PhylomeDB:P47980
GenomeRNAi:32222 NextBio:777464 Bgee:P47980 Uniprot:P47980
Length = 436
Score = 87 (35.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT C + G+CP+G +CHF H E
Sbjct: 174 YKTEYCRTFHSVGFCPYGPRCHFVHNADE 202
Score = 74 (31.1 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 87 FKTKLCCKFRN-GTCPYITNCNFAHSIEELR 116
+KT+LC F G C Y C FAH ELR
Sbjct: 136 YKTELCRPFEEAGECKYGEKCQFAHGSHELR 166
>ZFIN|ZDB-GENE-050913-48 [details] [associations]
symbol:zgc:114130 "zgc:114130" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
ZFIN:ZDB-GENE-050913-48 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00530000063262 EMBL:BX927244 IPI:IPI00610779
Ensembl:ENSDART00000124803 Ensembl:ENSDART00000139068
Uniprot:F1QH59
Length = 394
Score = 82 (33.9 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 229 WKTRICNKWELTGYCPFGNKCHFAHGIQE 257
+KT C + G+CP+G +CHF H ++
Sbjct: 179 YKTEPCRTFHSIGFCPYGIRCHFVHNAED 207
Score = 78 (32.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 70 NGSQDVNSKSKAIGKMF--FKTKLCCKF-RNGTCPYITNCNFAHSIEELR 116
+G+ + S +I +KT+LC F G C Y C FAH EELR
Sbjct: 122 SGAASFSGSSSSISATSSRYKTELCRTFAERGLCKYGGKCQFAHGPEELR 171
>WB|WBGene00003865 [details] [associations]
symbol:oma-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0048599 "oocyte development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0001556 "oocyte maturation" evidence=IGI]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0009792 GO:GO:0005813 GO:GO:0008270 GO:GO:0003676
EMBL:FO080486 GO:GO:0001556 eggNOG:COG5063 GO:GO:0043186
GeneTree:ENSGT00530000063262 PIR:T28994 RefSeq:NP_505069.1
ProteinModelPortal:Q23359 SMR:Q23359 DIP:DIP-26006N IntAct:Q23359
MINT:MINT-251688 STRING:Q23359 PaxDb:Q23359
EnsemblMetazoa:ZC513.6.1 EnsemblMetazoa:ZC513.6.2 GeneID:179183
KEGG:cel:CELE_ZC513.6 UCSC:ZC513.6 CTD:179183 WormBase:ZC513.6
HOGENOM:HOG000016873 InParanoid:Q23359 OMA:HIMTGGR NextBio:904278
Uniprot:Q23359
Length = 393
Score = 85 (35.0 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 227 SNWKTRICNKWELTGYCPFGNKCHFAH 253
+ ++T++C+K+ TG CP+G +C F H
Sbjct: 146 NKYRTKLCDKYTTTGLCPYGKRCLFIH 172
Score = 72 (30.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 87 FKTKLCCKF-RNGTCPYITNCNFAHSIEELR 116
+KT +C + + TC + NC FAH EELR
Sbjct: 106 YKTVICQAWLESKTCAFAENCRFAHGEEELR 136
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 349 333 0.00091 116 3 11 23 0.47 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 616 (65 KB)
Total size of DFA: 278 KB (2144 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.32u 0.09s 33.41t Elapsed: 00:00:03
Total cpu time: 33.33u 0.09s 33.42t Elapsed: 00:00:03
Start: Fri May 10 08:32:56 2013 End: Fri May 10 08:32:59 2013